View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3116_low_3 (Length: 589)

Name: NF3116_low_3
Description: NF3116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3116_low_3
NF3116_low_3
[»] chr8 (63 HSPs)
chr8 (206-525)||(45414318-45414627)
chr8 (11-181)||(17313456-17313621)
chr8 (8-181)||(34805779-34805949)
chr8 (8-181)||(17045924-17046093)
chr8 (8-181)||(7219369-7219537)
chr8 (8-181)||(14718857-14719025)
chr8 (8-181)||(27467702-27467872)
chr8 (8-181)||(39685413-39685581)
chr8 (8-181)||(41360980-41361148)
chr8 (8-181)||(16239083-16239251)
chr8 (8-181)||(16845018-16845186)
chr8 (8-181)||(43817879-43818047)
chr8 (11-181)||(44602854-44603017)
chr8 (11-181)||(169620-169786)
chr8 (8-181)||(11924757-11924926)
chr8 (8-181)||(36216492-36216659)
chr8 (6-91)||(2184410-2184495)
chr8 (10-181)||(44908488-44908649)
chr8 (10-181)||(38139303-38139471)
chr8 (23-181)||(39525458-39525610)
chr8 (8-84)||(26518802-26518879)
chr8 (10-181)||(37034816-37034984)
chr8 (10-120)||(36059247-36059358)
chr8 (11-91)||(2190647-2190728)
chr8 (11-91)||(6816024-6816105)
chr8 (12-181)||(39485942-39486108)
chr8 (32-181)||(41526324-41526467)
chr8 (19-181)||(11579194-11579350)
chr8 (10-120)||(1877549-1877659)
chr8 (19-181)||(38137634-38137791)
chr8 (10-181)||(44655059-44655224)
chr8 (10-121)||(34997523-34997634)
chr8 (34-181)||(39997991-39998134)
chr8 (19-176)||(45138971-45139122)
chr8 (18-80)||(1922389-1922448)
chr8 (19-91)||(38909288-38909360)
chr8 (19-91)||(42844281-42844352)
chr8 (135-181)||(42844411-42844457)
chr8 (10-67)||(33848715-33848772)
chr8 (29-179)||(12261387-12261532)
chr8 (20-91)||(15310398-15310470)
chr8 (20-91)||(15490767-15490839)
chr8 (133-181)||(24511636-24511684)
chr8 (135-179)||(42984098-42984142)
chr8 (136-178)||(6816147-6816189)
chr8 (135-181)||(14449524-14449570)
chr8 (8-78)||(35916571-35916641)
chr8 (133-179)||(39140716-39140762)
chr8 (19-60)||(20665623-20665663)
chr8 (133-178)||(26518714-26518759)
chr8 (135-180)||(35916481-35916526)
chr8 (19-59)||(1921795-1921835)
chr8 (135-170)||(33848634-33848669)
chr8 (135-178)||(35004369-35004412)
chr8 (21-60)||(39201524-39201562)
chr8 (133-175)||(2184329-2184371)
chr8 (135-181)||(40048591-40048637)
chr8 (29-91)||(42984002-42984064)
chr8 (133-178)||(22947644-22947689)
chr8 (19-60)||(30550986-30551026)
chr8 (19-60)||(44215735-44215775)
chr8 (141-181)||(2190558-2190598)
chr8 (133-181)||(45296702-45296750)
[»] chr6 (37 HSPs)
chr6 (8-181)||(18593525-18593693)
chr6 (8-181)||(3850216-3850384)
chr6 (8-181)||(32244368-32244535)
chr6 (8-181)||(559718-559886)
chr6 (8-181)||(20791537-20791705)
chr6 (8-180)||(28472212-28472380)
chr6 (8-90)||(33945824-33945906)
chr6 (10-181)||(7541098-7541263)
chr6 (8-91)||(24046560-24046643)
chr6 (19-181)||(34247671-34247827)
chr6 (10-180)||(6018490-6018656)
chr6 (19-88)||(6833553-6833622)
chr6 (35-181)||(19988908-19989048)
chr6 (19-181)||(17505488-17505645)
chr6 (10-180)||(29859401-29859569)
chr6 (19-91)||(173062-173134)
chr6 (19-91)||(5414562-5414634)
chr6 (135-179)||(10943067-10943111)
chr6 (19-91)||(34207003-34207075)
chr6 (19-89)||(10945711-10945781)
chr6 (19-91)||(24162794-24162866)
chr6 (19-91)||(29043209-29043281)
chr6 (133-181)||(34206927-34206975)
chr6 (135-181)||(172967-173013)
chr6 (135-179)||(10945820-10945864)
chr6 (133-181)||(24046478-24046526)
chr6 (135-181)||(29977738-29977784)
chr6 (19-60)||(247420-247460)
chr6 (19-60)||(12582489-12582529)
chr6 (133-178)||(33945738-33945783)
chr6 (20-60)||(29976317-29976357)
chr6 (19-58)||(18314008-18314046)
chr6 (135-170)||(29043319-29043354)
chr6 (18-60)||(3053946-3053987)
chr6 (144-178)||(24162914-24162948)
chr6 (135-176)||(5414482-5414523)
chr6 (24-80)||(8866970-8867026)
[»] chr4 (80 HSPs)
chr4 (8-181)||(1166629-1166796)
chr4 (8-181)||(1169111-1169278)
chr4 (8-181)||(7400123-7400292)
chr4 (8-181)||(55991809-55991979)
chr4 (8-181)||(53274618-53274787)
chr4 (8-181)||(7365786-7365954)
chr4 (6-181)||(11200821-11200992)
chr4 (8-178)||(11966923-11967087)
chr4 (8-181)||(13890909-13891079)
chr4 (8-181)||(27288389-27288557)
chr4 (8-181)||(40950935-40951103)
chr4 (8-181)||(55188160-55188328)
chr4 (9-181)||(17624651-17624821)
chr4 (8-181)||(55208400-55208571)
chr4 (8-181)||(26111368-26111539)
chr4 (8-178)||(34264550-34264715)
chr4 (8-91)||(10137883-10137966)
chr4 (8-91)||(32206596-32206679)
chr4 (10-181)||(17976438-17976604)
chr4 (8-91)||(6940178-6940261)
chr4 (8-181)||(36189974-36190142)
chr4 (10-91)||(28116843-28116924)
chr4 (11-180)||(24303720-24303884)
chr4 (10-181)||(8847929-8848097)
chr4 (10-179)||(23628826-23628990)
chr4 (10-91)||(18138327-18138408)
chr4 (19-120)||(11180909-11181010)
chr4 (10-180)||(37873560-37873728)
chr4 (8-91)||(29099625-29099708)
chr4 (9-91)||(32200716-32200799)
chr4 (19-180)||(28361410-28361565)
chr4 (10-91)||(49125536-49125618)
chr4 (18-181)||(8151202-8151359)
chr4 (19-120)||(43117519-43117620)
chr4 (19-91)||(41144305-41144377)
chr4 (13-60)||(34663865-34663912)
chr4 (19-121)||(22556965-22557067)
chr4 (11-91)||(40665513-40665593)
chr4 (11-67)||(45472461-45472518)
chr4 (19-91)||(26097651-26097723)
chr4 (133-181)||(28116749-28116797)
chr4 (19-91)||(46045795-46045867)
chr4 (19-181)||(39651736-39651889)
chr4 (29-91)||(32139419-32139481)
chr4 (10-67)||(52620629-52620687)
chr4 (136-181)||(45019181-45019226)
chr4 (19-91)||(346607-346679)
chr4 (11-91)||(24631102-24631181)
chr4 (133-181)||(32206509-32206557)
chr4 (133-181)||(34663964-34664012)
chr4 (19-91)||(40849729-40849801)
chr4 (133-181)||(52620731-52620779)
chr4 (10-91)||(20681186-20681268)
chr4 (135-181)||(32200633-32200679)
chr4 (135-181)||(46045716-46045762)
chr4 (19-88)||(8654318-8654386)
chr4 (136-181)||(10581901-10581946)
chr4 (136-180)||(34664934-34664978)
chr4 (8-44)||(45019226-45019262)
chr4 (33-89)||(51153499-51153555)
chr4 (136-179)||(18138452-18138495)
chr4 (136-179)||(49125663-49125706)
chr4 (135-181)||(346520-346566)
chr4 (19-60)||(10262029-10262069)
chr4 (19-60)||(21562386-21562426)
chr4 (19-60)||(24080100-24080140)
chr4 (23-167)||(30071346-30071484)
chr4 (144-181)||(32139536-32139573)
chr4 (19-60)||(43329907-43329947)
chr4 (133-181)||(41106050-41106098)
chr4 (31-81)||(25881932-25881982)
chr4 (136-181)||(20681304-20681348)
chr4 (19-60)||(26926970-26927010)
chr4 (135-176)||(41144225-41144266)
chr4 (136-181)||(44856696-44856741)
chr4 (19-60)||(51449973-51450013)
chr4 (133-181)||(9097387-9097435)
chr4 (133-181)||(24631018-24631066)
chr4 (39-91)||(40952041-40952093)
chr4 (135-179)||(40952131-40952175)
[»] chr1 (62 HSPs)
chr1 (8-181)||(39326959-39327126)
chr1 (8-181)||(7833537-7833705)
chr1 (8-181)||(17585507-17585675)
chr1 (8-181)||(33373735-33373903)
chr1 (8-181)||(11583148-11583314)
chr1 (8-181)||(46588007-46588174)
chr1 (8-181)||(9574853-9575021)
chr1 (11-180)||(38802300-38802464)
chr1 (8-181)||(33895131-33895300)
chr1 (8-181)||(25659724-25659893)
chr1 (8-181)||(41901614-41901783)
chr1 (8-181)||(43120693-43120862)
chr1 (8-181)||(33894008-33894170)
chr1 (8-181)||(3265108-3265276)
chr1 (8-181)||(33642602-33642770)
chr1 (11-178)||(11754146-11754308)
chr1 (8-178)||(45104172-45104337)
chr1 (8-181)||(33818010-33818177)
chr1 (8-181)||(33831845-33832008)
chr1 (8-181)||(33877478-33877645)
chr1 (8-181)||(14487239-14487407)
chr1 (8-91)||(36165521-36165604)
chr1 (8-181)||(40432113-40432286)
chr1 (8-91)||(47037131-47037214)
chr1 (8-181)||(17249026-17249195)
chr1 (8-181)||(39879056-39879224)
chr1 (19-176)||(43123042-43123193)
chr1 (10-181)||(31638331-31638496)
chr1 (8-90)||(36952714-36952797)
chr1 (19-178)||(43119032-43119186)
chr1 (8-91)||(1322525-1322609)
chr1 (19-91)||(24473551-24473623)
chr1 (8-91)||(16097336-16097417)
chr1 (19-89)||(34078285-34078355)
chr1 (10-91)||(46040486-46040568)
chr1 (48-178)||(31215782-31215907)
chr1 (48-178)||(31221537-31221662)
chr1 (33-179)||(17366271-17366411)
chr1 (10-80)||(18091268-18091337)
chr1 (19-81)||(34652277-34652339)
chr1 (33-181)||(39729120-39729262)
chr1 (24-72)||(11606486-11606534)
chr1 (133-181)||(47037045-47037092)
chr1 (135-178)||(33933029-33933072)
chr1 (136-179)||(34652388-34652431)
chr1 (136-179)||(36952630-36952673)
chr1 (19-120)||(7308302-7308404)
chr1 (135-181)||(23730210-23730255)
chr1 (11-89)||(33932911-33932988)
chr1 (133-179)||(44819821-44819867)
chr1 (134-179)||(16097457-16097502)
chr1 (133-178)||(46040405-46040450)
chr1 (133-181)||(16033008-16033056)
chr1 (10-81)||(23730305-23730376)
chr1 (133-169)||(43808843-43808879)
chr1 (135-179)||(45589729-45589773)
chr1 (133-180)||(36165435-36165482)
chr1 (133-176)||(40648494-40648537)
chr1 (133-181)||(49571312-49571357)
chr1 (133-178)||(12247685-12247730)
chr1 (133-181)||(28568671-28568719)
chr1 (133-181)||(44065358-44065406)
[»] scaffold0481 (2 HSPs)
scaffold0481 (11-178)||(4431-4592)
scaffold0481 (11-181)||(7442-7610)
[»] chr7 (65 HSPs)
chr7 (8-179)||(18956216-18956381)
chr7 (8-181)||(38045647-38045815)
chr7 (13-181)||(12907906-12908069)
chr7 (8-181)||(29448631-29448800)
chr7 (8-181)||(40239811-40239980)
chr7 (8-170)||(27031153-27031312)
chr7 (11-181)||(37669184-37669349)
chr7 (8-180)||(32960712-32960879)
chr7 (8-181)||(10999102-10999271)
chr7 (11-181)||(43156185-43156349)
chr7 (8-181)||(40789169-40789337)
chr7 (8-181)||(41426953-41427120)
chr7 (8-91)||(17278144-17278227)
chr7 (8-89)||(23639417-23639498)
chr7 (8-181)||(1448090-1448258)
chr7 (8-89)||(45620639-45620720)
chr7 (8-181)||(4399981-4400149)
chr7 (19-176)||(4492356-4492506)
chr7 (8-180)||(4407957-4408119)
chr7 (19-181)||(41343235-41343392)
chr7 (19-179)||(4404295-4404447)
chr7 (10-181)||(4406541-4406709)
chr7 (10-121)||(47840722-47840833)
chr7 (11-80)||(4615384-4615454)
chr7 (11-91)||(6607088-6607169)
chr7 (18-91)||(44651882-44651955)
chr7 (19-91)||(20482280-20482352)
chr7 (19-67)||(43111035-43111083)
chr7 (19-91)||(5526108-5526177)
chr7 (10-91)||(21134356-21134436)
chr7 (133-181)||(16933401-16933449)
chr7 (133-181)||(16938784-16938832)
chr7 (133-181)||(17278266-17278314)
chr7 (19-91)||(36769226-36769298)
chr7 (10-60)||(20135107-20135158)
chr7 (29-181)||(38049152-38049299)
chr7 (35-181)||(40035944-40036083)
chr7 (11-67)||(16933493-16933550)
chr7 (11-67)||(16938876-16938933)
chr7 (133-178)||(20135005-20135050)
chr7 (133-181)||(43111127-43111175)
chr7 (133-181)||(44651793-44651841)
chr7 (19-90)||(5483406-5483477)
chr7 (135-181)||(36765688-36765734)
chr7 (136-181)||(4616173-4616218)
chr7 (19-60)||(19036362-19036402)
chr7 (19-60)||(20718234-20718274)
chr7 (15-179)||(23154632-23154789)
chr7 (133-170)||(23639341-23639378)
chr7 (19-60)||(29488481-29488521)
chr7 (19-60)||(33232657-33232697)
chr7 (19-60)||(34284799-34284839)
chr7 (139-179)||(5483522-5483562)
chr7 (133-181)||(42828799-42828847)
chr7 (8-39)||(19758160-19758191)
chr7 (22-80)||(3840021-3840079)
chr7 (136-178)||(37143542-37143584)
chr7 (145-178)||(5526226-5526259)
chr7 (19-60)||(20762915-20762955)
chr7 (142-179)||(36769344-36769381)
chr7 (144-176)||(3840137-3840169)
chr7 (133-181)||(4490953-4491001)
chr7 (133-169)||(42915464-42915500)
chr7 (133-181)||(47171748-47171796)
chr7 (135-175)||(47840841-47840881)
[»] chr3 (72 HSPs)
chr3 (8-181)||(54510302-54510470)
chr3 (8-181)||(30268998-30269167)
chr3 (8-181)||(45599181-45599350)
chr3 (9-181)||(29500325-29500493)
chr3 (8-181)||(33932402-33932569)
chr3 (8-181)||(22346994-22347163)
chr3 (8-181)||(7040873-7041041)
chr3 (8-181)||(36592131-36592299)
chr3 (8-181)||(19536699-19536866)
chr3 (8-181)||(4018908-4019077)
chr3 (8-181)||(54741795-54741966)
chr3 (8-178)||(13450264-13450432)
chr3 (8-204)||(48545101-48545293)
chr3 (8-181)||(52674775-52674942)
chr3 (8-181)||(26881613-26881780)
chr3 (8-181)||(14587301-14587470)
chr3 (10-181)||(39721252-39721418)
chr3 (19-181)||(53022669-53022826)
chr3 (8-181)||(7265047-7265215)
chr3 (19-181)||(50739157-50739313)
chr3 (19-181)||(50773542-50773698)
chr3 (8-181)||(52461019-52461188)
chr3 (8-178)||(29450651-29450817)
chr3 (8-179)||(2909424-2909592)
chr3 (19-181)||(36987654-36987810)
chr3 (19-181)||(37013093-37013249)
chr3 (11-91)||(20849404-20849484)
chr3 (8-91)||(46757551-46757633)
chr3 (10-181)||(12101377-12101545)
chr3 (9-91)||(43316516-43316598)
chr3 (19-181)||(48961122-48961276)
chr3 (10-120)||(38361743-38361854)
chr3 (19-181)||(41990680-41990836)
chr3 (8-181)||(42187665-42187833)
chr3 (20-204)||(15496362-15496541)
chr3 (19-179)||(47719487-47719641)
chr3 (10-121)||(35906654-35906766)
chr3 (10-91)||(54203746-54203828)
chr3 (11-91)||(35690212-35690293)
chr3 (19-120)||(44762694-44762795)
chr3 (19-91)||(46090118-46090190)
chr3 (8-91)||(13337091-13337173)
chr3 (8-176)||(37413560-37413724)
chr3 (19-181)||(54113415-54113577)
chr3 (19-91)||(54195682-54195754)
chr3 (134-181)||(875879-875926)
chr3 (19-120)||(20996305-20996406)
chr3 (19-80)||(46850722-46850783)
chr3 (135-180)||(54203667-54203712)
chr3 (8-70)||(875825-875884)
chr3 (31-181)||(33899842-33899986)
chr3 (8-91)||(50933196-50933279)
chr3 (136-181)||(35529773-35529818)
chr3 (10-81)||(12996822-12996893)
chr3 (133-181)||(46757672-46757720)
chr3 (133-179)||(46850630-46850676)
chr3 (19-60)||(44075416-44075456)
chr3 (35-91)||(10617639-10617695)
chr3 (137-169)||(10617736-10617768)
chr3 (133-181)||(34433455-34433503)
chr3 (19-55)||(34433767-34433803)
chr3 (145-181)||(38361874-38361910)
chr3 (133-181)||(44541229-44541277)
chr3 (133-180)||(54795955-54796002)
chr3 (19-57)||(916278-916315)
chr3 (139-181)||(35690122-35690164)
chr3 (8-54)||(42617780-42617826)
chr3 (29-91)||(46088720-46088782)
chr3 (135-176)||(46090037-46090078)
chr3 (19-80)||(54835729-54835790)
chr3 (133-181)||(32754257-32754305)
chr3 (133-181)||(52464882-52464930)
[»] scaffold0166 (1 HSPs)
scaffold0166 (8-180)||(1465-1632)
[»] chr5 (67 HSPs)
chr5 (8-180)||(24758971-24759138)
chr5 (8-181)||(2475189-2475357)
chr5 (8-181)||(24027775-24027943)
chr5 (8-181)||(3297740-3297908)
chr5 (8-181)||(16050689-16050857)
chr5 (8-179)||(27176393-27176560)
chr5 (8-181)||(31939749-31939918)
chr5 (11-181)||(31884580-31884745)
chr5 (8-181)||(4374769-4374940)
chr5 (27-179)||(25821231-25821377)
chr5 (8-181)||(26379203-26379374)
chr5 (10-178)||(42110679-42110843)
chr5 (8-91)||(6928360-6928443)
chr5 (8-181)||(5589382-5589550)
chr5 (8-179)||(42322865-42323031)
chr5 (11-181)||(665476-665642)
chr5 (8-180)||(32261632-32261798)
chr5 (10-181)||(29874584-29874750)
chr5 (13-181)||(15976476-15976640)
chr5 (10-181)||(19361641-19361805)
chr5 (8-181)||(29383642-29383811)
chr5 (10-91)||(789026-789108)
chr5 (10-180)||(2530075-2530242)
chr5 (10-122)||(39803824-39803934)
chr5 (19-180)||(28746235-28746390)
chr5 (15-178)||(36083790-36083948)
chr5 (11-181)||(789977-790142)
chr5 (19-91)||(40308340-40308412)
chr5 (9-181)||(36088567-36088736)
chr5 (19-181)||(8314829-8314987)
chr5 (10-180)||(3246819-3246985)
chr5 (29-91)||(16166292-16166354)
chr5 (23-180)||(42111726-42111877)
chr5 (23-181)||(43396524-43396680)
chr5 (10-90)||(10042782-10042863)
chr5 (11-179)||(30503448-30503613)
chr5 (11-179)||(30543791-30543956)
chr5 (133-181)||(14205522-14205570)
chr5 (8-60)||(28990970-28991022)
chr5 (10-81)||(40506812-40506884)
chr5 (10-179)||(42416790-42416955)
chr5 (135-181)||(10042908-10042954)
chr5 (19-120)||(37147067-37147168)
chr5 (133-181)||(30503673-30503721)
chr5 (133-181)||(30544016-30544064)
chr5 (19-178)||(7536645-7536800)
chr5 (19-60)||(19270905-19270946)
chr5 (135-180)||(31958299-31958344)
chr5 (10-81)||(31958394-31958465)
chr5 (10-91)||(29382576-29382659)
chr5 (135-181)||(39783070-39783116)
chr5 (133-170)||(15875675-15875712)
chr5 (135-180)||(16488044-16488089)
chr5 (8-60)||(28887173-28887226)
chr5 (19-60)||(37461872-37461912)
chr5 (135-179)||(788943-788987)
chr5 (133-181)||(3213148-3213196)
chr5 (24-60)||(14720185-14720221)
chr5 (137-180)||(40506719-40506762)
chr5 (20-81)||(1060706-1060766)
chr5 (15-60)||(2463637-2463682)
chr5 (148-181)||(14720307-14720340)
chr5 (144-181)||(28887299-28887336)
chr5 (30-91)||(35380505-35380566)
chr5 (144-181)||(36514975-36515012)
chr5 (39-91)||(14205433-14205485)
chr5 (133-181)||(28869452-28869500)
[»] chr2 (41 HSPs)
chr2 (8-181)||(1835677-1835844)
chr2 (8-181)||(970945-971114)
chr2 (8-181)||(8878111-8878280)
chr2 (10-181)||(7274664-7274831)
chr2 (8-181)||(31972274-31972442)
chr2 (8-181)||(36085861-36086030)
chr2 (11-176)||(24926005-24926165)
chr2 (9-181)||(8683652-8683819)
chr2 (8-181)||(18166749-18166916)
chr2 (8-181)||(5166258-5166427)
chr2 (8-181)||(3324178-3324347)
chr2 (8-91)||(7233015-7233098)
chr2 (11-178)||(4631203-4631369)
chr2 (19-181)||(3079720-3079876)
chr2 (10-181)||(3243209-3243377)
chr2 (10-181)||(668206-668375)
chr2 (19-181)||(34912654-34912810)
chr2 (19-181)||(40202218-40202374)
chr2 (8-181)||(17032728-17032896)
chr2 (11-176)||(36078481-36078637)
chr2 (10-120)||(38879129-38879240)
chr2 (19-181)||(45474725-45474881)
chr2 (45-181)||(20313162-20313294)
chr2 (19-178)||(1117981-1118136)
chr2 (19-181)||(35423789-35423939)
chr2 (19-181)||(41452818-41452974)
chr2 (19-91)||(10120612-10120684)
chr2 (133-181)||(17051064-17051112)
chr2 (48-176)||(38959564-38959687)
chr2 (8-60)||(17051169-17051221)
chr2 (11-70)||(9799346-9799405)
chr2 (10-91)||(2180011-2180093)
chr2 (133-179)||(9799239-9799285)
chr2 (135-181)||(10120724-10120770)
chr2 (19-60)||(3708454-3708494)
chr2 (19-60)||(11868922-11868962)
chr2 (19-60)||(35360315-35360355)
chr2 (29-86)||(38709708-38709765)
chr2 (135-181)||(2180132-2180178)
chr2 (135-181)||(13549490-13549536)
chr2 (133-178)||(35287226-35287271)
[»] scaffold0197 (1 HSPs)
scaffold0197 (8-181)||(25699-25869)
[»] scaffold0178 (1 HSPs)
scaffold0178 (19-181)||(7204-7364)
[»] scaffold0198 (1 HSPs)
scaffold0198 (19-181)||(15174-15333)
[»] scaffold0024 (3 HSPs)
scaffold0024 (11-89)||(90463-90542)
scaffold0024 (136-181)||(110442-110487)
scaffold0024 (145-181)||(90374-90410)
[»] scaffold0768 (1 HSPs)
scaffold0768 (19-88)||(6306-6375)
[»] scaffold0244 (1 HSPs)
scaffold0244 (10-91)||(7574-7656)
[»] scaffold0020 (2 HSPs)
scaffold0020 (133-180)||(132770-132817)
scaffold0020 (8-91)||(132647-132730)
[»] scaffold1793 (1 HSPs)
scaffold1793 (133-181)||(182-230)
[»] scaffold0027 (2 HSPs)
scaffold0027 (135-181)||(137944-137990)
scaffold0027 (19-89)||(138031-138101)
[»] scaffold1822 (1 HSPs)
scaffold1822 (133-181)||(354-402)
[»] scaffold0003 (1 HSPs)
scaffold0003 (133-181)||(229193-229241)
[»] scaffold0016 (1 HSPs)
scaffold0016 (133-181)||(99489-99537)


Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 206 - 525
Target Start/End: Original strand, 45414318 - 45414627
Alignment:
Q  206 ttactccataaaagaatttaccctcgaaaaataaataaaaatgagacggacagcatagattgattattg-aagtgaaaaagatgcaaaggcacgccacgt 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  45414318 ttactccataaaagaatttaccgtcgaaaaataaataaaaatgagaaggacagcatagattgattattgaaagtgaaaaagatgcaaaggcatgccacgt 45414417  T
Q  305 gacatttagaagagaaggacaccaac-atcaatcatgagaattagtatagttgcatcatcaggacacactactaataaagtaaccacaacttcaatttaa 403  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||      
T  45414418 gacatttagaagagaaggacaccaacaatcaatcatgagaattagtatagttg---catcaggacacactactaataaagtaaccaccacttcaattt-- 45414512  T
Q  404 tttaattagtacaattaattaacaacaaataaaaatatataaagacgtaggt----gacagacagagttgtgtgaaa-cgtttgatttgattcgtaccga 498  Q
                ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||| ||||||||||||||||||||||    
T  45414513 ------------aattaattaacaacaaataaaaatatataaagacgtaggtgacagacagacagagttgtgtgaaaccgtttgatttgattcgtaccga 45414600  T
Q  499 tgggcgtttgtgtttggctaatcatca 525  Q
    |||||||||||||||||||||||||||    
T  45414601 tgggcgtttgtgtttggctaatcatca 45414627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 17313621 - 17313456
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         ||||||||||    
T  17313621 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaacc 17313522  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17313521 aaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17313456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 34805779 - 34805949
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||           |||||    
T  34805779 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaactaaaaaaaaaaataaag 34805878  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34805879 aaaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 34805949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 17046093 - 17045924
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  17046093 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 17045994  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| ||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17045993 aaccaaacagctttggccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17045924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 7219369 - 7219537
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||||| |||||||||         |||||||    
T  7219369 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaataaagaa 7219468  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7219469 accaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 14718857 - 14719025
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  14718857 cagacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 14718956  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| |||||||||          |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  14718957 accaaatagctttagccttt------ttcttaaagagctttattttaactttattttaaagtagcttttagaccg 14719025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 27467702 - 27467872
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||           |||||    
T  27467702 cagacaccaccaaaaaaaaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaataaag 27467801  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27467802 aaaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27467872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 39685413 - 39685581
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  39685413 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 39685512  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||           |||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  39685513 accaaacagctttag------tctttttcttaaagagctttattttaactttattttaaaatagcttttagaccg 39685581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 41360980 - 41361148
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| ||||| |||         |||||||    
T  41360980 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagtactaaaaaaaaataaagaa 41361079  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||| ||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41361080 accaaacagctttggccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41361148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 16239251 - 16239083
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  16239251 cagacaccactataaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactacaaaaaaataaagaa 16239152  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |           ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16239151 accaaacagctttaaccttta------tcttaaagagctttattttaactttgttttaaagtagcttttagaccg 16239083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 16845018 - 16845186
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||| || |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||         |||||||    
T  16845018 cagacatcagcaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaactaaaaaaaaataaagaa 16845117  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    | ||||||||||||||          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  16845118 atcaaacagctttagccttt------ttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 16845186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 43818047 - 43817879
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||| |||||||||         |||||||    
T  43818047 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaactacaaaaaaataaagaa 43817948  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||| || |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43817947 accaaacagctataaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 44603017 - 44602854
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         ||||||||||    
T  44603017 acaccaccaaaaa-taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaacc 44602919  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||| |||||||          ||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  44602918 aaacaactttagcctt-------ttcgtaaagagctttattttaactttgttttaaaatagtttttagaccg 44602854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 169786 - 169620
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||| | |||||||| |||||||||        ||||||||||    
T  169786 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaactaaaagaaataaagaaacc 169687  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          || ||||||  ||||||||||||||| ||||||||||| ||||||||||    
T  169686 aaacagctttagcctttt-----tttttaaaggactttattttaactttattttaaagtagcttttagaccg 169620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 11924757 - 11924926
Alignment:
Q  8 cagacaccaccaa-aaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaaga 105  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||         |||| |    
T  11924757 cagacaccaccaagaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaactgaaaaaaaataaaaa 11924856  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||          ||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  11924857 aaccaaacagctttagctttt------ttcttaaagggttttattttaactttgttttaaagtagcttttagaccg 11924926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 36216659 - 36216492
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||| |||||||||        ||||||||    
T  36216659 cagacaccacaaaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaataaagaaa 36216560  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||| ||||| |          || ||||||| ||||||||||| ||| ||||||||||| ||||||||||    
T  36216559 ccaaacaactttaaccttt------tttttaaagaactttattttaatttttttttaaagtagcttttagaccg 36216492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 2184495 - 2184410
Alignment:
Q  6 cacagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |  ||||||| |||||||||    
T  2184495 cacagacaccaccaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 44908488 - 44908649
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaac 108  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||         |||||||||    
T  44908488 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaac 44908587  T
Q  109 caaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |     ||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44908588 c-----gctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 44908649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 38139303 - 38139471
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||          |||||||    
T  38139303 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaataaaataaagaa 38139402  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||| |          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  38139403 accaaacaactttacctttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 38139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 39525458 - 39525610
Alignment:
Q  23 aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagc 122  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||| | |||||||| |||||||||        ||||||||||||||| ||||| |    
T  39525458 aataataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaactaaaaaaaataaagaaaccaaacaactttaac 39525557  T
Q  123 nnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
              |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  39525558 tttt------ttcttatagagctttattttaactttgttttaaagtagcttttagaccg 39525610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 26518879 - 26518802
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattt 84  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  26518879 cagacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattt 26518802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 37034816 - 37034984
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||          |||||||    
T  37034816 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaattaaaataaagaa 37034915  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| | |||||||          | ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  37034916 accaaataactttagctttt------tccttaaagagctatattttaactttgttttaaagtaaattttagaccg 37034984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 36059358 - 36059247
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||    
T  36059358 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaataaaataaagaaac 36059259  T
Q  109 caaacagcttta 120  Q
    |||||| |||||    
T  36059258 caaacaacttta 36059247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 2190728 - 2190647
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||    
T  2190728 acaccaccaaaaaaataataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 6816024 - 6816105
Alignment:
Q  11 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||    
T  6816024 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 6816105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 181
Target Start/End: Complemental strand, 39486108 - 39485942
Alignment:
Q  12 caccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaac 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| | |||||||          ||||||||     
T  39486108 caccaccaaaataataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactgtagaactaaaaaaaaaataaagaaaa 39486009  T
Q  109 caaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||| |          | ||||||||||||||||||||||||||||||||||||  |||||||||    
T  39486008 caaacagctttaactttt------tccttaaagagctttattttaactttgttttaaagtagcctttagaccg 39485942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 41526324 - 41526467
Alignment:
Q  32 ttcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnnnnnnn 131  Q
    ||||||||||||||||||||||||| ||| | ||||||| | |||||||| |||||||||        ||||||||||||||| ||||||              
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaaccaaacaactttagttttt----- 41526418  T
Q  132 cttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
     |||||||||||||||||||||||||||||||||||||| || |||||||    
T  41526419 -ttcttaaagagctttattttaactttgttttaaagtagcttctagaccg 41526467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 11579194 - 11579350
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||| ||||||||| |||||||||||||||| ||||| | ||||||| | |||||||| |||||||||        |||||||||||||||||||    
T  11579194 aaaaaataacaaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaaccaaacagctt 11579293  T
Q  119 tagcnnnnnnnnncttc-ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          ||| ||||| || |||||||||||||||||||||||||| ||||||||||    
T  11579294 taacttt-------ttctttaaaaaggtttattttaactttgttttaaagtagcttttagaccg 11579350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 1877659 - 1877549
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| | ||||||||  ||||||||        ||||||||||    
T  1877659 gacagcacaaaaaaataataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaactaaaaaaaataaagaaacc 1877560  T
Q  110 aaacagcttta 120  Q
    ||||| |||||    
T  1877559 aaacaacttta 1877549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 38137791 - 38137634
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaaacagct 117  Q
    ||||||||||||||||||||||||||||||||||||  |||| | ||||||| | |||||||| ||||||| |         ||||||||||||||| ||    
T  38137791 aaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaattaaaaataaataaagaaaccaaacaact 38137692  T
Q  118 ttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||| |          | ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  38137691 ttacctttt------tccttaaagagttttattttaactttgttttaaagtagcttttagaccg 38137634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 44655059 - 44655224
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||| |||||||||| |||||||||||||||| || ||||||||||| | ||||| | | ||||||||  ||||| ||        |||||||| |    
T  44655059 gacaccacaaaaaaataattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataaagttagagctaaaaaaaataaagaaatc 44655158  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          | ||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  44655159 aaacagctttagctttt------tccttaaagagctttattttatctttgttttaaagtagctttaagaccg 44655224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 34997523 - 34997634
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||| ||||||||||||||||  | |||||||||||||||||||||| | ||||||| | |||||||| | |||||||        ||||||||||    
T  34997523 gacaccacaaaaaaataataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataactatagaactaaaaaaaataaagaaacc 34997622  T
Q  110 aaacagctttag 121  Q
    ||||| ||||||    
T  34997623 aaacaactttag 34997634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 34 - 181
Target Start/End: Original strand, 39997991 - 39998134
Alignment:
Q  34 caaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn--taaagaaaccaaacagctttagcnnnnnnnnn 131  Q
    |||||||||||||||| |||||| ||| | ||||||| |||||||||| |||||||||          |||||||||||||||||||||||             
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaactaaaaaaaaaataaagaaaccaaacagctttagccttt----- 39998085  T
Q  132 cttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
     |||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  39998086 -ttcttatagagctttattttaactttgttttaaagtatcttttagaccg 39998134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 45139122 - 45138971
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || ||| ||||| ||||||||||||||||||| || | ||||||| | |||||||| |||| ||||        |||||||||||||||||||    
T  45139122 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactttaaaactaaaaaaaataaagaaaccaaacagctt 45139023  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    || |          | |||||||||||||||||||||||||||||||||||| |||||    
T  45139022 taactttt------tccttaaagagctttattttaactttgttttaaagtagctttta 45138971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 1922389 - 1922448
Alignment:
Q  18 caaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaata 80  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||| |||||||    
T  1922389 caaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaatttaaaaata 1922448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 38909288 - 38909360
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||| ||||||||||||||||| |||  | ||||||| | |||||||| |||||||||    
T  38909288 aaaaaataataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 42844281 - 42844352
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| ||||||| |||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  42844281 aaaaaataataaatttaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 42844411 - 42844457
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  42844411 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 42844457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 33848772 - 33848715
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttt 67  Q
    |||||||| | |||| || |||||||||||||||||||||||||||||||||| ||||    
T  33848772 gacaccacaacaaaaaaaaaaattcaaagttttgtacaatattttgccaaataacttt 33848715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 179
Target Start/End: Complemental strand, 12261532 - 12261387
Alignment:
Q  29 aaattcaaagttttgtacaatattttgccaaatagctttt-aattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnnn 127  Q
    ||||||||||||||||||||||||||| |||| | ||||| || | |||||||| |||| ||||        ||||||||||||||||||||| |         
T  12261532 aaattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactttaaaactaaaaaaaataaagaaaccaaacagctttaactttt- 12261434  T
Q  128 nnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
         | |||||||| ||||||||||||||| ||||||||||| ||||||||    
T  12261433 -----tccttaaagaactttattttaactttattttaaagtagtttttagac 12261387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 15310398 - 15310470
Alignment:
Q  20 aaaaataataaattcaaagttttgtacaatattttgccaaa-tagcttttaattcaaaaataattttagaact 91  Q
    |||||||| |||||||||||||| |||||||||||||||||  | ||||||| | |||||||| |||||||||    
T  15310398 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 15490767 - 15490839
Alignment:
Q  20 aaaaataataaattcaaagttttgtacaatattttgccaaa-tagcttttaattcaaaaataattttagaact 91  Q
    |||||||| |||||||||||||| |||||||||||||||||  | ||||||| | |||||||| |||||||||    
T  15490767 aaaaataagaaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 24511636 - 24511684
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  24511636 ttcttaaagatctttattttaactttgttttaaagtagcttttaaaccg 24511684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 42984098 - 42984142
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||    
T  42984098 cttaaagagctttatttcaactttgttttaaagtagtttttagac 42984142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 6816147 - 6816189
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  6816147 ttaaagggctttattttaactttgttttaaagtagcttttaga 6816189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 14449570 - 14449524
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  14449570 cttaaatagctttattttaactttgttttaaagtaacttttagaccg 14449524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 35916641 - 35916571
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaa 78  Q
    |||||||||| |||||| || |||| |||  |||||||||||||||||||||| | ||||||||| |||||    
T  35916641 cagacaccacaaaaaaaaaaaaaatccaatattttgtacaatattttgccaaacaacttttaatttaaaaa 35916571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 39140762 - 39140716
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||    
T  39140762 ttcttaaagaactttattttaactttgttttaaagtaacttttagac 39140716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 20665663 - 20665623
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  20665663 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 20665623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 26518759 - 26518714
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||    
T  26518759 ttcttaaagagctttatcttaactttattttaaagtagcttttaga 26518714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 35916526 - 35916481
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||    
T  35916526 cttaaagagctttattttaactttgttttaaagcagttttcagacc 35916481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 1921795 - 1921835
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaa 59  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  1921795 aaaaaataataaattcaaagttgtgtataatattttgccaa 1921835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 170
Target Start/End: Complemental strand, 33848669 - 33848634
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtag 170  Q
    ||||| ||||||||||||||||||||||||||||||    
T  33848669 cttaaggagctttattttaactttgttttaaagtag 33848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 35004369 - 35004412
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||| | ||||||||||||||||||||||||||| |||||||    
T  35004369 cttaaataactttattttaactttgttttaaagtagtttttaga 35004412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 39201524 - 39201562
Alignment:
Q  21 aaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  39201524 aaaataataaattcaaa-ttttgtacaatattttgccaaa 39201562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 2184371 - 2184329
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagatttt 175  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||    
T  2184371 ttcttaatgagctttattttaactttattttaaagtagctttt 2184329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 40048637 - 40048591
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||||||||||||| ||||||| ||| ||||||||||    
T  40048637 cttaaagaactttattttaactttattttaaaatagcttttagaccg 40048591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 42984002 - 42984064
Alignment:
Q  29 aaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||| || ||||||||||||||||| ||||| | ||||||| | |||||||| |||||||||    
T  42984002 aaattaaatgttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 22947689 - 22947644
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||  ||||||||||||||||||||||||||  |||||||    
T  22947689 ttcttaaaggcctttattttaactttgttttaaagtaacttttaga 22947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 30551026 - 30550986
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  30551026 aaaaaataataaattcaaag-tttgtacaatattttgtcaaa 30550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 44215775 - 44215735
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  44215775 aaaaaataataaattcaaag-tttgtacaatattttgtcaaa 44215735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 181
Target Start/End: Complemental strand, 2190598 - 2190558
Alignment:
Q  141 gagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||| ||||||||||| |||| |||||    
T  2190598 gagctttattttaactttattttaaagtagcttttggaccg 2190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 45296750 - 45296702
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||| |||||  ||||||||||    
T  45296750 ttcttaaaggcctttattttaactttgttttgaagtaacttttagaccg 45296702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 18593693 - 18593525
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  18593693 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 18593594  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18593593 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 18593525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 3850216 - 3850384
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  3850216 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 3850315  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  3850316 accaaacagctttagccttt------ttcttaaagagctttattttaactttgtttgaaagtagcttttacaccg 3850384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 32244368 - 32244535
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| | |||||||        ||||||||    
T  32244368 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactgtagaactaaaaaaaataaagaaa 32244467  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||||          |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  32244468 ccaaacagttttagccttt------ttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32244535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 559718 - 559886
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  559718 cagacaccaccagaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactacaaaaaaataaagaa 559817  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||| |          |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  559818 accaaacaactttaaccttt------ttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 559886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 20791537 - 20791705
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  20791537 cagacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 20791636  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| ||| |          |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  20791637 accaaacagccttaaccttt------ttcttaaagagctttattttaactttgttttaaagtattttttagaccg 20791705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 28472212 - 28472380
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||          ||||||    
T  28472212 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaataaataaaga 28472311  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||| ||||| |          |||||||||||||||||||||||||||||||||||||| |||||||||    
T  28472312 aaccaaacaactttatctttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagacc 28472380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 33945906 - 33945824
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaac 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  33945906 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 33945824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 7541098 - 7541263
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||  ||||||||||||||| || ||||||||||| ||||||||||| | ||||||| | |||||||| |||||||||        ||||||||||    
T  7541098 gacaccagaaaaaaataataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaacc 7541197  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  7541198 aaacagctttagctttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 7541263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 24046643 - 24046560
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  24046643 cagacaccaccaaaggataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 34247827 - 34247671
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||||||||||||||||||||||||  |||| | ||||||| | |||||||| |||||||||        |||||||||||||||||||    
T  34247827 aaaaaataataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaaccaaacagctt 34247728  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          | |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  34247727 taactttt------tccttaaagaactttattttaactttgttttaaagtagcttttagaccg 34247671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 6018656 - 6018490
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaa 107  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||| | |||||||| |||||| ||         ||||||||    
T  6018656 gacaccaccaaaaaaataataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagatctaaaaaaaaataaagaaa 6018557  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||||||| |          | |||||||||||||||||||||||||||||||||||  |||||||||    
T  6018556 ccaaacagctttaactttt------tccttaaagagctttattttaactttgttttaaagtaacttttagacc 6018490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 6833553 - 6833622
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttaga 88  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||    
T  6833553 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6833622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 35 - 181
Target Start/End: Original strand, 19988908 - 19989048
Alignment:
Q  35 aaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnnnnnnnctt 134  Q
    |||||||||||||||||||||||| | | ||||||| | |||||||| |||||||||        |||||||||||||||||||||            ||    
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaactataaaaaataaagaaaccaaacagcttta------catttttt 19989001  T
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || ||||||||||||||||||||||||||||||||||||||||||||    
T  19989002 ctaaaagagctttattttaactttgttttaaagtagattttagaccg 19989048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 17505488 - 17505645
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaaccaaacagct 117  Q
    ||||||| ||||||||||||||||||| ||||||||  |||| | ||||||| | |||||||| |||||||||         ||||||||||||||||||    
T  17505488 aaaaaattataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaactaaaaataaataaagaaaccaaacagct 17505587  T
Q  118 ttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||            |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17505588 tta------atttttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17505645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 29859401 - 29859569
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn---taaaga 105  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| |||| | ||||||| | ||||||||  ||||||||           ||||||    
T  29859401 gacaccaccaaaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataagcttagaactaaaaaaataaataaaga 29859500  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||| ||||| |          |||||||||||||||||||||||||||||||||||||| |||||||||    
T  29859501 aaccaaacaactttatctttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagacc 29859569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 173134 - 173062
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||| |||||||||||| ||||||||| |||| | ||||||| | ||||||||||||||||||    
T  173134 aaaaaataataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 5414634 - 5414562
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||| ||||||||| |||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  5414634 aaaaattaataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 10943111 - 10943067
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10943111 cttaaagagctttattttaactttgttttaaagtagattttagac 10943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 34207075 - 34207003
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||| |||||||||||||||| ||||| | ||||||| | |||||||| |||||||||    
T  34207075 aaaaaataataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 10945711 - 10945781
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||| | | |||||| |||||||    
T  10945711 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataactttagaa 10945781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 24162794 - 24162866
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | ||||| | | |||||||| |||||||||    
T  24162794 aaaaaataataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 29043209 - 29043281
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||| || |||||||||||| ||||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  29043209 aaaaaaaaaaaaattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 34206975 - 34206927
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  34206975 ttcttaaaaagctttattttaactttgttttaaagtagcttttagaccg 34206927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 173013 - 172967
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  173013 cttaaagagttttattttaactttgttttaaagtagtttttagaccg 172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 10945820 - 10945864
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  10945820 cttaaagaactttattttaactttgttttaaagtaaattttagac 10945864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 24046526 - 24046478
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| || |||||||||||||||||||||||||| ||||||||||    
T  24046526 ttcttaaatagttttattttaactttgttttaaagtagcttttagaccg 24046478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 29977738 - 29977784
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  29977738 cttaaagagctttatttaaactttgttttaaaatagtttttagaccg 29977784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 247420 - 247460
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  247420 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 247460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 12582529 - 12582489
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  12582529 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 12582489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 33945783 - 33945738
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||    
T  33945783 ttcttaaaaagctttattttaactttgttttaaagtatcttttaga 33945738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 29976317 - 29976357
Alignment:
Q  20 aaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  29976317 aaaaataataaatttaaagttttgtacaatatttttccaaa 29976357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 18314008 - 18314046
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgcca 58  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  18314008 aaaaaataataaattcaaag-tttgtacaatattttgcca 18314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 170
Target Start/End: Original strand, 29043319 - 29043354
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtag 170  Q
    ||||||||||| ||||||||||||||||||||||||    
T  29043319 cttaaagagctctattttaactttgttttaaagtag 29043354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 3053987 - 3053946
Alignment:
Q  18 caaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  3053987 caaaaaataataaatttaaagttt-gtacaatattttgccaaa 3053946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 24162914 - 24162948
Alignment:
Q  144 ctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||||||||||||||||||||||| |||||||    
T  24162914 ctttattttaactttgttttaaagtagtttttaga 24162948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 5414523 - 5414482
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    ||||||||| |||||||||||||||||||||| ||| |||||    
T  5414523 cttaaagagttttattttaactttgttttaaaatagctttta 5414482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 8866970 - 8867026
Alignment:
Q  24 ataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaata 80  Q
    ||||||||||||||| ||  ||||||||||||||||| | ||||||| | |||||||    
T  8866970 ataataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaata 8867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 8e-44; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 1166629 - 1166796
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||    
T  1166629 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 1166728  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| |||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1166729 ccaaacagttttaactttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1166796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 1169111 - 1169278
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||    
T  1169111 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 1169210  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| |||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1169211 ccaaacagttttaactttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1169278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 7400292 - 7400123
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  7400292 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 7400193  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7400192 aaccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7400123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 55991809 - 55991979
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||           |||||    
T  55991809 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaactaaaaaaaaaaataaag 55991908  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55991909 aaaccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 55991979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 53274618 - 53274787
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  53274618 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 53274717  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53274718 aaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53274787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 7365786 - 7365954
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||||         |||||||    
T  7365786 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaactaaaaaaaaataaagaa 7365885  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7365886 accaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7365954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 6 - 181
Target Start/End: Original strand, 11200821 - 11200992
Alignment:
Q  6 cacagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaa 103  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | |||||||| |||||||||          ||||    
T  11200821 cacagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaactaaaaaaaaaataaa 11200920  T
Q  104 gaaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11200921 gaaaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 11200992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 178
Target Start/End: Complemental strand, 11967087 - 11966923
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||        ||||||||    
T  11967087 cagacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaactaaaaaaaataaagaaa 11966988  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||| |||| |          ||||||||||| |||||||||||||||||||||||||  |||||||    
T  11966987 ccaaacagttttaaccttt------ttcttaaagagttttattttaactttgttttaaagtaacttttaga 11966923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 13891079 - 13890909
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||           |||||    
T  13891079 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaataaag 13890980  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||| |          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13890979 aaaccaaacagctttaaccttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 13890909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 27288557 - 27288389
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  27288557 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactacaaaaaaataaagaa 27288458  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||| |||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27288457 accgaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 27288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 40950935 - 40951103
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  40950935 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactataaaaaaataaagaa 40951034  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    | |||||||||||| |          ||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  40951035 atcaaacagctttaaccttt------ttcttaaagagttttattttaactttattttaaagtagcttttagaccg 40951103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 55188160 - 55188328
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  55188160 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 55188259  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| ||||||          |||||||||||||||||||||||||| ||||||| ||  ||||||||||    
T  55188260 accaaacagttttagccttt------ttcttaaagagctttattttaactttattttaaaataatttttagaccg 55188328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 17624651 - 17624821
Alignment:
Q  9 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |||||||| |||||||||           ||||||    
T  17624651 agacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaactaaaaaaaaaaataaaga 17624750  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  17624751 aaccaaacagctttagcctttt-----ttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 17624821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 55208571 - 55208400
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| | |||||||            ||||    
T  55208571 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactgtagaactaaaaaaaaaaaataaa 55208472  T
Q  104 gaaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||| |          |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  55208471 gaaaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 55208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 26111368 - 26111539
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||           |||||    
T  26111368 cagacaccacaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaataaag 26111467  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||           ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  26111468 aaaccaaacagctttagcctttta-----tcttaaagaactttattttaactttgttttaaagtagcttttagaccg 26111539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 8 - 178
Target Start/End: Complemental strand, 34264715 - 34264550
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||         |||||||    
T  34264715 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaactacaaaaaaataaagaa 34264616  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||||||| |          ||||||||||| |||||||||||||||| ||||||||| |||||||    
T  34264615 accaaacagctttaaccttt------ttcttaaagagttttattttaactttgtattaaagtagcttttaga 34264550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 10137966 - 10137883
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  10137966 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 32206679 - 32206596
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  32206679 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 17976438 - 17976604
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||    
T  17976438 gacaccaccaaaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaactaaaaaaaataaagaaac 17976537  T
Q  109 caaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||| ||||||          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  17976538 caaacagttttagctttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 17976604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 6940261 - 6940178
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  6940261 cagacgccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 36190142 - 36189974
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||| |||||||||         |||||||    
T  36190142 cagacaccatcaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaactaaaaaaaaataaagaa 36190043  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||  |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36190042 accaaacagatttgacattt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 36189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 28116924 - 28116843
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  28116924 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 28116843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 11 - 180
Target Start/End: Complemental strand, 24303884 - 24303720
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||||||        ||||||||||    
T  24303884 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaactaaaaaaaataaagaaacc 24303785  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||| |||||||||          | ||||||  |||||||||||||||| ||||||||||| |||||||||    
T  24303784 aaatagctttagctttt------tccttaaatggctttattttaactttattttaaagtagcttttagacc 24303720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 8847929 - 8848097
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||          |||||||    
T  8847929 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaaaataaagaa 8848028  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          | |||||||||||||||||||||||||||||||||||| || |||||||    
T  8848029 accaaacagctttaactttt------tccttaaagagctttattttaactttgttttaaagtagcttgtagaccg 8848097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 23628826 - 23628990
Alignment:
Q  10 gacaccaccaaa-aaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||    
T  23628826 gacaccaccaaagaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaac 23628925  T
Q  109 caaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||| ||||            | |||||||| ||||||||||||||||||||||||||| ||||||||    
T  23628926 caaacagtttta------agtttttccttaaagaactttattttaactttgttttaaagtagcttttagac 23628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 18138327 - 18138408
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| | |||||||| |||||||||    
T  18138327 gacaccaccaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 11180909 - 11181010
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||||||||||||    
T  11180909 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaaccaaacagctt 11181008  T
Q  119 ta 120  Q
    ||    
T  11181009 ta 11181010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 10 - 180
Target Start/End: Complemental strand, 37873728 - 37873560
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||||||||| | ||||||||| |||||||| |||||||||          |||||||    
T  37873728 gacaccaccaaaaaaataataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaactaaaaaaaaaataaagaa 37873629  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagcttta-ttttaactttgttttaaagtagattttagacc 180  Q
    ||||||||| ||||||          | |||||||||||||| |||||||||||||||||||||| |||||||||    
T  37873628 accaaacagttttagctttt------tccttaaagagctttatttttaactttgttttaaagtagcttttagacc 37873560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 29099708 - 29099625
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||| | |||||||| |||| ||||    
T  29099708 cagacaccaccaaaaaataataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactttacaact 29099625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 32200799 - 32200716
Alignment:
Q  9 agacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||| |||| ||||    
T  32200799 agacaccaccaaaaaagtaataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactttaaaact 32200716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 28361565 - 28361410
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || ||| |||||||||||||||||||||||||||| | ||||||| | |||||||| || | ||||        |||||||||||||||||||    
T  28361565 aaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattcataactaaaaaaaataaagaaaccaaacagctt 28361466  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||          | || ||||||||||||||||||||||||||||||||| |||||||||    
T  28361465 tagctttt------tcctgaaagagctttattttaactttgttttaaagtagcttttagacc 28361410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 49125536 - 49125618
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||| | |||||||| |||||||||    
T  49125536 gacaccaccaaaaaaataataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 8151202 - 8151359
Alignment:
Q  18 caaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaaccaaacagc 116  Q
    ||||||| || |||||||||||||||||||| |||||| |||| | ||||||| | ||||||||||||||||||         ||||||||||||||| |    
T  8151202 caaaaaaaaaaaaattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaactaaaaaaaaataaagaaaccaaacaac 8151300  T
Q  117 tttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||           |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8151301 tttagttttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8151359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 43117519 - 43117620
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||||| || |||||||||        ||||||||||||||| |||    
T  43117519 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaactaaaaaaaataaagaaaccaaacaactt 43117618  T
Q  119 ta 120  Q
    ||    
T  43117619 ta 43117620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 41144377 - 41144305
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||| | |||||||| |||||||||    
T  41144377 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 34663865 - 34663912
Alignment:
Q  13 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34663865 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 34663912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 22556965 - 22557067
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||||||||||||||| ||||||||| |||| | ||||||| | |||||||| |||||||||        |||||||||||||||| ||    
T  22556965 aaaaaataataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaactaataaaaataaagaaaccaaacagttt 22557064  T
Q  119 tag 121  Q
    |||    
T  22557065 tag 22557067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 40665513 - 40665593
Alignment:
Q  11 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||| ||||| | |||||||| |||||||||    
T  40665513 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 45472518 - 45472461
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttt 67  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  45472518 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaataacttt 45472461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 26097723 - 26097651
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| |  ||||||| |||| ||||    
T  26097723 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactttaaaact 26097651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 28116797 - 28116749
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28116797 ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 28116749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 46045867 - 46045795
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||| || |||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  46045867 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 46045795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 39651736 - 39651889
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || |||||||||||||||||||| ||||||||||| | ||||||| | |||||||| ||||  |||        |||||||||||||||||||    
T  39651736 aaaaaaaaaaaaattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttta--actctaaaaa-taaagaaaccaaacagctt 39651832  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39651833 taactttt------tccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39651889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 32139419 - 32139481
Alignment:
Q  29 aaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||||||||| | ||||||| | ||||||||||||| ||||    
T  32139419 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaaaact 32139481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 52620629 - 52620687
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttt 67  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  52620629 gacaccaccaaaaaaataataaattcagagttttgtacaatattttgccaaataacttt 52620687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 45019226 - 45019181
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  45019226 ttaaagagctttattttaactttgttttaaagtagcttttagaccg 45019181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 346679 - 346607
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||| ||||||||||||| ||||||||| | ||||||| | || ||||| |||||||||    
T  346679 aaaaaataataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact 346607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 24631181 - 24631102
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||| | ||||||| | ||||||| ||||| ||||    
T  24631181 acaccaccaaaaaataataaattcaaagtatt-tacaatatttttccaaacaacttttaacttaaaaatagttttaaaact 24631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 32206557 - 32206509
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  32206557 ttcttaaagagctttattttaactttattttaaagtagcttttagaccg 32206509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 34663964 - 34664012
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  34663964 ttcttaaagagctttattttaactttattttaaagtagcttttagaccg 34664012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 40849729 - 40849801
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||| |||| |  |||||| | |||||||| |||| ||||    
T  40849729 aaaaaataataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactttataact 40849801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 52620731 - 52620779
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  52620731 ttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 52620779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 20681186 - 20681268
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||| ||||| | ||||||| | |||||||| |||| ||||    
T  20681186 gacaccaccaaaaaaataataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactttaaaact 20681268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 32200679 - 32200633
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  32200679 cttaaagagctttattttaactttgttttaaaatagcttttagaccg 32200633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 46045762 - 46045716
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  46045762 cttaaaaagctttattttaactttgttttaaagtagcttttagaccg 46045716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 8654386 - 8654318
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttaga 88  Q
    |||||||||||||||||||||||||||||||| ||||||||| |  |||||| | |||||||| ||||||    
T  8654386 aaaaaataataaattcaaagttttgtacaata-tttgccaaacaatttttaacttaaaaataactttaga 8654318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 10581946 - 10581901
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  10581946 ttaaagagctttattttaattttgttttaaagtagtttttagaccg 10581901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 34664934 - 34664978
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  34664934 ttaaagaactttattttaactttgttttaaagtagcttttagacc 34664978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 45019262 - 45019226
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgt 44  Q
    |||||||||||||||||||||||||||||||||||||    
T  45019262 cagacaccaccaaaaaataataaattcaaagttttgt 45019226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 51153499 - 51153555
Alignment:
Q  33 tcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    |||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||    
T  51153499 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 51153555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 18138452 - 18138495
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||    
T  18138452 ttaaagagctttattttaactttattttaaagtagcttttagac 18138495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 49125663 - 49125706
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||    
T  49125663 ttaaagagctttattttaactttattttaaagtagcttttagac 49125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 346566 - 346520
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  346566 cttaaagagctttatttttactttgttttaaagtagcttttaaaccg 346520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 10262069 - 10262029
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  10262069 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 10262029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 21562386 - 21562426
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  21562386 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 21562426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 24080140 - 24080100
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  24080140 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 24080100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 30071346 - 30071484
Alignment:
Q  23 aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagc 122  Q
    ||||||||||| |||||||||||| ||||||||||||| | |||| || | |||||||| |||| ||||        |||||||| |||| ||||||| |    
T  30071346 aataataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactttataactaaaaaaaataaagaaatcaaatagctttaac 30071445  T
Q  123 nnnnnnnnncttcttaaagagctttattttaactttgttttaaag 167  Q
              |||||||||| ||||||||||||||||||||||||    
T  30071446 ttct------ttcttaaagatctttattttaactttgttttaaag 30071484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 32139536 - 32139573
Alignment:
Q  144 ctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  32139536 ctttattttaactttgttttaaagtagcttttagaccg 32139573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 43329907 - 43329947
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  43329907 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 43329947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 41106050 - 41106098
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| ||||||||||| ||||||||||||| || ||||||||||    
T  41106050 ttcttaaagggctttattttatctttgttttaaaggagtttttagaccg 41106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 25881932 - 25881982
Alignment:
Q  31 attcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa 81  Q
    |||||||||||||||||||||||||| ||| | ||||||| | ||||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataa 25881982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 20681304 - 20681348
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||    
T  20681304 ttaaagagctttattt-aactttattttaaagtagcttttagaccg 20681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 26927010 - 26926970
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  26927010 aaaaaataataaattcaaag-tttgtacaatattttgtcaaa 26926970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 41144266 - 41144225
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    ||||||| |||||||||||||||||| |||||||| ||||||    
T  41144266 cttaaagtgctttattttaactttgtgttaaagtatatttta 41144225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 44856696 - 44856741
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||    
T  44856696 ttaaagggctttattttaactttgttttaaaggagcttttaaaccg 44856741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 51449973 - 51450013
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  51449973 aaaaaataataaatttaaagttt-gtacaatattttgccaaa 51450013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 9097435 - 9097387
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||| |||||  ||||||||||    
T  9097435 ttcttaaaggcctttattttaactttgttttgaagtaacttttagaccg 9097387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 24631066 - 24631018
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| | |||||||||||||||| || ||||||| ||||||||||    
T  24631066 ttcttaaaaacctttattttaactttgattcaaagtagcttttagaccg 24631018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 40952041 - 40952093
Alignment:
Q  39 ttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||| |||| | ||||||| | |||||||| |||||||||    
T  40952041 ttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 40952131 - 40952175
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||| | ||||||||||||||| ||||||||||| ||||||||    
T  40952131 cttaaaaaactttattttaactttattttaaagtagtttttagac 40952175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 8e-44; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 39327126 - 39326959
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||    
T  39327126 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 39327027  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||| |||||||          |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  39327026 ccaaacaactttagccttt------ttcttaaagagctttattttaactttattttaaagtagcttttagaccg 39326959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 7833537 - 7833705
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||         |||||||    
T  7833537 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaactaaaaaaaaataaagaa 7833636  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7833637 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7833705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 17585507 - 17585675
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  17585507 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 17585606  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  17585607 accaaacagctttagccttt------ttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 17585675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 33373903 - 33373735
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  33373903 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 33373804  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33373803 accaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 33373735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 11583148 - 11583314
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||    
T  11583148 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 11583247  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||| ||          |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  11583248 ccaaacagctttggccttt------ttcttaaagagctttattttaa-tttgttttaaagtagcttttagaccg 11583314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 46588174 - 46588007
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||    
T  46588174 cagacaccaccaaaaaataataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 46588075  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||          |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  46588074 ccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttagagtagcttttagaccg 46588007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 9574853 - 9575021
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||| |||||||||         |||||||    
T  9574853 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 9574952  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| |||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9574953 accaaacaactttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 9575021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 180
Target Start/End: Original strand, 38802300 - 38802464
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||         ||||||||||    
T  38802300 acaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaacc 38802399  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    |||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||||    
T  38802400 aaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagacc 38802464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 33895300 - 33895131
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  33895300 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 33895201  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||            |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33895200 aaccaaacagcttta------atctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33895131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 25659893 - 25659724
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          |||| |    
T  25659893 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaataaaataaata 25659794  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25659793 aaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 25659724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 41901783 - 41901614
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  41901783 cagacactaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 41901684  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||           |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41901683 aaccaaacagctttag------tctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 41901614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 43120862 - 43120693
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaac--tnnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||           ||||||    
T  43120862 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaacaaaaaaaaaaataaaga 43120763  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43120762 aaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 33894170 - 33894008
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  33894170 cagacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaattaaaga 33894071  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33894070 aaccaaacagcttt-------------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33894008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 3265108 - 3265276
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  3265108 cagacaccaccaaaaaataataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 3265207  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  3265208 accaaacagctttagccttt------ttcttaaagaactttattttaactttgttttagagtagcttttagaccg 3265276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 33642602 - 33642770
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnnta-aagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         | || ||    
T  33642602 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaaa 33642701  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33642702 accaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 33642770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 11754308 - 11754146
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||         ||||| ||||    
T  11754308 acaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagtaacc 11754209  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||    
T  11754208 aaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttaga 11754146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 45104172 - 45104337
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  45104172 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 45104271  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||| ||||| |          |||||||||||||||||||||||||||||| ||||||| |||||||    
T  45104272 accaaacaactttaaccttt------ttcttaaagagctttattttaactttgtttaaaagtagcttttaga 45104337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 33818177 - 33818010
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||        |||| |||    
T  33818177 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaataaaaaaa 33818078  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
     |||||| ||||||           |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33818077 tcaaacaactttag------tctttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33818010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 33832008 - 33831845
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||            ||||    
T  33832008 cagacaccaccaaaaaataataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaattaaaag 33831909  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33831908 aaaccaaacagcttt-------------ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 33831845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 33877645 - 33877478
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||        |||| |||    
T  33877645 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaataaaaaaa 33877546  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
     |||||| ||||||           |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33877545 tcaaacaactttag------tctttttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 33877478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 14487407 - 14487239
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||         |||| ||    
T  14487407 cagataccaccaaaaaataataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaaaaa 14487308  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  14487307 accaaacagctttagccttt------ttcttaaagagctttattttaactttattttaaagtagcttttaaaccg 14487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 36165604 - 36165521
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  36165604 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact 36165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 40432286 - 40432113
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa---ttttagaact---nnnnnnnnta 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||   | |||||| |           ||    
T  40432286 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttattagaattaaaaaaaaaaata 40432187  T
Q  102 aagaaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40432186 aagaaaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 47037214 - 47037131
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  47037214 cagacgccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 47037131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 17249026 - 17249195
Alignment:
Q  8 cagacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaaga 105  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||  | |||||||| |||||||||         ||||||    
T  17249026 cagacaccaccaaaaaaataataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaactgaaaaaaaataaaga 17249125  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||          ||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  17249126 aaccaaacagctttagccttt------ttcttaaagggctttattttaactttgttttaaagtagcttttacaccg 17249195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 39879224 - 39879056
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaa 106  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||||||||||| | ||||||| | |||||||| |||||||||        |||||||    
T  39879224 cagacaccaccaaaaaaataataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaactaaataaaataaagaa 39879125  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    | |||||||||||| |          ||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  39879124 atcaaacagctttaactttg------ttcttaaagagttttattttaactttgttttaaagtaatttttagaccg 39879056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 43123042 - 43123193
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||||        |||||||||||||||||||    
T  43123042 aaaaaataa-aaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaactaaaaaaaataaagaaaccaaacagctt 43123140  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    | ||          || |||||| |||||||||||||||||||||||||||| |||||    
T  43123141 ttgcctttt-----tttttaaagggctttattttaactttgttttaaagtagctttta 43123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 31638496 - 31638331
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||| | ||||||| | ||||||||  ||||| ||        ||||||||||    
T  31638496 gacaccacaaaaaaataattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataaagttagagctaaaaaaaataaagaaacc 31638397  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          | ||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  31638396 aaacagctttagctttt------tccttaaagagctttattttatctttgttttaaagtagctttaagaccg 31638331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 36952797 - 36952714
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaac 90  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| ||||||||    
T  36952797 cagacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaac 36952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 43119186 - 43119032
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaaacagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||         |||||||||||||||| |    
T  43119186 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaattaaagaaaccaaacagtt 43119087  T
Q  118 ttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||| |          ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  43119086 ttaactttt------ttcttaaagagttttattttaattttgttttaaagtagcttttaga 43119032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 1322609 - 1322525
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||| | ||||||||| |||||||| |||||||||    
T  1322609 cagacaccaccaaaaaaataataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 24473623 - 24473551
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  24473623 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 16097336 - 16097417
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||| |||||| ||  | ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  16097336 cagacaccacaaaaaaaaaa--acttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact 16097417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 34078285 - 34078355
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    |||||| || |||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||||    
T  34078285 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaa 34078355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 46040568 - 46040486
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||| | |||||||| |||| ||||    
T  46040568 gacaccaccaaaaaaataataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 31215907 - 31215782
Alignment:
Q  48 atattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaaccaaacagctttagcnnnnnnnnncttcttaaagagctt 146  Q
    ||||||||||||| | ||||||| |||||||||| |||||||||         |||||||||||||||||||||||           |||||||||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaataaagaaaccaaacagctttagcctttg------tcttaaagagctt 31215814  T
Q  147 tattttaactttgttttaaagtagattttaga 178  Q
    |||||||||||||||||||||||| |||||||    
T  31215813 tattttaactttgttttaaagtagcttttaga 31215782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 31221662 - 31221537
Alignment:
Q  48 atattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaaccaaacagctttagcnnnnnnnnncttcttaaagagctt 146  Q
    ||||||||||||| | ||||||| |||||||||| |||||||||         |||||||||||||||||||||||           |||||||||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaataaagaaaccaaacagctttagcctttg------tcttaaagagctt 31221569  T
Q  147 tattttaactttgttttaaagtagattttaga 178  Q
    |||||||||||||||||||||||| |||||||    
T  31221568 tattttaactttgttttaaagtagcttttaga 31221537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 17366411 - 17366271
Alignment:
Q  33 tcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnnnnnnnc 132  Q
    |||||||||||||||||||||| ||||| | ||||||| | |||||||| ||||||| |        ||||||||||||||| |||||                
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaattaaaaaaaataaagaaaccaaacaacttta------cttttt 17366318  T
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    | |||||||||||||||||||||||||||||||||||| ||||||||    
T  17366317 tccttaaagagctttattttaactttgttttaaagtagcttttagac 17366271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 18091268 - 18091337
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaata 80  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||| | ||||||| | |||||||    
T  18091268 gacaccataaaaaaataataaattcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaata 18091337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 34652277 - 34652339
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa 81  Q
    ||||||||||||||||||| ||||||||||||||||| |||| | ||||||| | ||||||||    
T  34652277 aaaaaataataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataa 34652339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 39729262 - 39729120
Alignment:
Q  33 tcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnnnnnnnc 132  Q
    |||||||||||||||||||||||  ||| | ||||||| | |||||||| ||||||| |        ||||||||||||||||||||| |              
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaattaaaaaaaataaagaaaccaaacagctttaacttt------- 39729170  T
Q  133 ttctt-aaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  39729169 ttctttaaagagctttattttaattttgttttaaagtagcttttagaccg 39729120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 11606534 - 11606486
Alignment:
Q  24 ataataaattcaaagttttgtacaatattttgccaaatagcttttaatt 72  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||||    
T  11606534 ataataaatttaaagttttgtacaatattttgccaaacaacttttaatt 11606486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 47037092 - 47037045
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  47037092 ttcttaaa-agctttattttaactttgttttaaagtagcttttagaccg 47037045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 33933029 - 33933072
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  33933029 cttaaagaactttattttaactttgttttaaagtagcttttaga 33933072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 34652388 - 34652431
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  34652388 ttaaagaactttattttaactttgttttaaagtagtttttagac 34652431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 36952673 - 36952630
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  36952673 ttaaagaactttattttaactttgttttaaagtagcttttagac 36952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 7308404 - 7308302
Alignment:
Q  19 aaaaaataataaattcaaag-ttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagct 117  Q
    |||||| || |||||||||  |||||||||||||||||||||| | ||||||| | ||||||||  ||||||||        ||||||||||||||||||    
T  7308404 aaaaaaaaaaaaattcaaaaattttgtacaatattttgccaaacaacttttaacttaaaaataacattagaactaaaaaaaataaagaaaccaaacagct 7308305  T
Q  118 tta 120  Q
    |||    
T  7308304 tta 7308302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 23730255 - 23730210
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  23730255 cttaaagagctttattttaactttg-tttaaagtagcttttagaccg 23730210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 33932911 - 33932988
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    ||||||| |||||| || ||||| |||||||||||  ||||||||||||| | ||||||||| |||||||| |||||||    
T  33932911 acaccacaaaaaaaaaaaaaatt-aaagttttgtatgatattttgccaaacaacttttaatttaaaaataactttagaa 33932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 44819867 - 44819821
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||    
T  44819867 ttcttaaatacctttattttaactttgttttaaagtagcttttagac 44819821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 16097457 - 16097502
Alignment:
Q  134 tcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||    
T  16097457 tcttaaaggactttattttaactttgttttaaagtagcttttagac 16097502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 46040450 - 46040405
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||||| |||||||||||||||||||||||| ||| |||||||    
T  46040450 ttcttaaagggctttattttaactttgttttaaaatagcttttaga 46040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 16033056 - 16033008
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| |||||||||||||||||||| |||||  ||||||||||    
T  16033056 ttcttaaagacctttattttaactttgttttgaagtaacttttagaccg 16033008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 23730376 - 23730305
Alignment:
Q  10 gacaccaccaaaaaat-aataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa 81  Q
    |||||||||||||||  ||||| |||||||||| |||||||||||||||||| | ||||||| | ||||||||    
T  23730376 gacaccaccaaaaaagcaataatttcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataa 23730305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 43808843 - 43808879
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagta 169  Q
    ||||||||||| |||||||||||||||||||||||||    
T  43808843 ttcttaaagagttttattttaactttgttttaaagta 43808879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 45589729 - 45589773
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||    
T  45589729 cttaaagggctttattttaactttgttttaaagtaacttttagac 45589773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 36165482 - 36165435
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    |||||||| ||||||||||||||||| ||||||| ||| |||||||||    
T  36165482 ttcttaaaaagctttattttaactttattttaaaatagcttttagacc 36165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 40648537 - 40648494
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    ||||||||||||||||||| ||||||||||||||| || |||||    
T  40648537 ttcttaaagagctttatttgaactttgttttaaaggagctttta 40648494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 49571312 - 49571357
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||||||||   ||||||||||| ||||||||||    
T  49571312 ttcttaaagagctttattttaact---ttttaaagtagcttttagaccg 49571357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 12247730 - 12247685
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||  ||||||||||||||||||||||||||  |||||||    
T  12247730 ttcttaaaggcctttattttaactttgttttaaagtaacttttaga 12247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 28568719 - 28568671
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||| |||||  ||||||||||    
T  28568719 ttcttaaaggcctttattttaactttgttttgaagtaacttttagaccg 28568671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 44065406 - 44065358
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  ||| ||||||||||||||||||||| | ||||||||||    
T  44065406 ttcttaaagcccttaattttaactttgttttaaagtcgtttttagaccg 44065358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 4592 - 4431
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacca 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||        |||||||||||    
T  4592 acaccaccaaaaaataataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaacca 4493  T
Q  111 aacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||    
T  4492 aacagctttagcattt------ttcttaaagagctttattttaactttgttttaaagtagcttttaga 4431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 7442 - 7610
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||            |||||||    
T  7442 acaccaccaaaaaataataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataataaagaa 7541  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7542 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 18956381 - 18956216
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||    
T  18956381 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 18956282  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||||||||||           |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18956281 ccaaacagctttag------tctttttcttaaagagctttattttaactttgttttaaagtagcttttagac 18956216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 38045647 - 38045815
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  38045647 cagacaccaccaaaaaataataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 38045746  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38045747 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 38045815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 12907906 - 12908069
Alignment:
Q  13 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         ||||||||||||    
T  12907906 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaaccaa 12908005  T
Q  112 acagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12908006 acagctttggccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 12908069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 29448800 - 29448631
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  29448800 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 29448701  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29448700 aaccaaacagctttaaccttt------ttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 29448631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 40239980 - 40239811
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  40239980 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactacaaaaaaaataaaga 40239881  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| |||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40239880 aaccaaacagttttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 40239811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 27031312 - 27031153
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||           |||||    
T  27031312 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaataaag 27031213  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtag 170  Q
    ||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  27031212 aaaccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtag 27031153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 37669349 - 37669184
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |         |||||| |||    
T  37669349 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaaataaagatacc 37669250  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37669249 aaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37669184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 32960879 - 32960712
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  32960879 cagacactatcaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 32960780  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||||||||||          ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  32960779 accaaacagctttagccttt------ttcttaaagagttttattttaactttgttttaaagtagcttttagacc 32960712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 10999102 - 10999271
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||           |||||    
T  10999102 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaaaga 10999201  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| ||          ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  10999202 aaccaaacagctttggccttt------ttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 10999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 43156185 - 43156349
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         ||||||||||    
T  43156185 acaccaccaaaaaataataa-ttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaacc 43156283  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43156284 aaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 43156349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 40789169 - 40789337
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||||         |||||||    
T  40789169 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttataactaaaaaaaaataaagaa 40789268  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  40789269 accaaacagctttaaccttt------ttcttaaagaactttattttaactttgttttaaagttgcttttagaccg 40789337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 41426953 - 41427120
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  41426953 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactacaaaaaaataaagaa 41427052  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          ||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  41427053 accaaacagctttaactttt------ttcttaaaga-atttattttaactttgttttaaagtagcttttagaccg 41427120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 17278144 - 17278227
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  17278144 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17278227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 23639498 - 23639417
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  23639498 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 23639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 1448090 - 1448258
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||  |||||||||         |||||||    
T  1448090 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaactaaaaaaaaataaagaa 1448189  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||| ||||          |||| |||||| |||||||||||||||||||||| ||| ||||| ||||    
T  1448190 accaaacagctctagccttt------ttctgaaagagatttattttaactttgttttaaaatagcttttaaaccg 1448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 45620639 - 45620720
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||    
T  45620639 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 45620720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 4400149 - 4399981
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaa 106  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| |||| | ||||||| | |||||||| |||||||||        |||||||    
T  4400149 cagacaccaccaaaaaaatattaaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaactgaaaaaaataaagaa 4400050  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||| |          ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  4400049 accaaacaactttaactttt------ttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 4399981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 4492506 - 4492356
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||  ||||||||        ||||||| |||||||||||    
T  4492506 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttttaatt-taaaataaccttagaactaaaaaaaataaagaatccaaacagctt 4492408  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    || |          |||||||||||||||||||||||||||||||||||||| |||||    
T  4492407 taactttt------ttcttaaagagctttattttaactttgttttaaagtagctttta 4492356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 4408119 - 4407957
Alignment:
Q  8 cagacaccaccaaaaa-ataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaa 106  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||| | |||||||| |||| ||||         ||| ||    
T  4408119 cagacaccaccaaaaagataataaattcaaagttta-tacaatattttgccaaacagcttttaacttaaaaataactttaaaactaaaaa----aaataa 4408025  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||||    
T  4408024 accaaacagctttagctttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagacc 4407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 41343392 - 41343235
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaaacagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||| | | ||||| | |||||||| |||||||||         ||||||||| ||||| ||    
T  41343392 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaactaaaacaaaataaagaaacaaaacaact 41343293  T
Q  118 ttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  41343292 ttagctttt------tccttaaagagctttattttaactttgttttaaagtagtttttagaccg 41343235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 4404295 - 4404447
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||||||| | ||||  ||||||||||||        |||||||||||||||||||    
T  4404295 aaaaaataataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaa--aattttagaactaaaaaaaataaagaaaccaaacagctt 4404392  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    || |          | |||||| | ||||||||||||||||||||||||||| ||||||||    
T  4404393 taactttt------tccttaaataactttattttaactttgttttaaagtagcttttagac 4404447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 4406709 - 4406541
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||| ||| ||| |||||          |||||||    
T  4406709 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactttggaactaaaaaaaaaataaagaa 4406610  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    | |||||| ||||| |          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  4406609 aacaaacaactttaactttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 4406541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 47840722 - 47840833
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||||| | |||| || | |||||||| |||||||||        ||||||||||    
T  47840722 gacaccataaaaaaatactaaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaactaaaaaaaataaagaaacc 47840821  T
Q  110 aaacagctttag 121  Q
    ||||| ||||||    
T  47840822 aaacaactttag 47840833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 4615384 - 4615454
Alignment:
Q  11 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaata 80  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||    
T  4615384 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 6607088 - 6607169
Alignment:
Q  11 acaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||||| || |||||| | |||||||| |||||||||    
T  6607088 acaccaccaaaaaaataataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 44651955 - 44651882
Alignment:
Q  18 caaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||||||||||||||  |||| | ||||||| | |||||||| |||||||||    
T  44651955 caaaaaataataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 20482280 - 20482352
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | ||||| || |||| ||||    
T  20482280 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactttaaaact 20482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 43111035 - 43111083
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttt 67  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43111035 aaaaaataataaattcaaagttttgtacaatattttgccaaataacttt 43111083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 5526108 - 5526177
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||| ||||   ||||||| | |||||||| |||||||||    
T  5526108 aaaaaataataaattcaaagttttgtacaatattttgtcaaa---cttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 21134436 - 21134356
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||| |||||||| || |||| ||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  21134436 gacaccgccaaaaaaaaaaaaat-caaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 16933449 - 16933401
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  16933449 ttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 16933401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 16938832 - 16938784
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  16938832 ttcttaaagagctttattttaactttgttttaaaatagcttttagaccg 16938784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 17278266 - 17278314
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  17278266 ttcttaaagagctttatttcaactttgttttaaagtagcttttagaccg 17278314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 36769226 - 36769298
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| ||||||||||||  |||||||||||| | ||||||| | |||||||| |||||||||    
T  36769226 aaaaaataataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 20135158 - 20135107
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  20135158 gacaccaccaaaaaaatattaaattcaaagttttgtacaatattttgccaaa 20135107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 38049299 - 38049152
Alignment:
Q  29 aaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaaccaaacagctttagcnnnnn 127  Q
    ||||| |||||| ||||||||||||| ||||| | ||||||||| ||||||||||||| ||||         ||||||||||||||| ||||| |         
T  38049299 aaattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataattttaaaactaaaaaacaataaagaaaccaaacaactttaacttct- 38049201  T
Q  128 nnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
         |||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  38049200 -----ttcttaaagagctttattttaactttgttttaaattaggttttataccg 38049152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 35 - 181
Target Start/End: Complemental strand, 40036083 - 40035944
Alignment:
Q  35 aaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnnnnnnnctt 134  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||| |||| ||||        |||||||| |||||||||||| |          ||    
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactttaaaactataaaaa-taaagaaatcaaacagctttacctttt------tt 40035991  T
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  40035990 cttaaagagttttattttaactttattttaaagtagcttttagaccg 40035944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 16933550 - 16933493
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttt 67  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||    
T  16933550 acaccaccaaaaaaataataaattcaatgttttgtacaatattttgtcaaataacttt 16933493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 16938933 - 16938876
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttt 67  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||    
T  16938933 acaccaccaaaaaaataataaattcaatgttttgtacaatattttgtcaaataacttt 16938876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 20135050 - 20135005
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  20135050 ttcttaaagggctttattttaactttgttttaaagtagcttttaga 20135005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 43111127 - 43111175
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||| |||||||| |||||| ||||||||||    
T  43111127 ttcttaaagagctttattttaattttgttttgaagtagcttttagaccg 43111175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 44651841 - 44651793
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  44651841 ttcttaaagggctttattttaactttgttttaaagtaacttttagaccg 44651793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 5483406 - 5483477
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaac 90  Q
    |||||| || ||| |||||||||||||||||||||| ||||| | ||||||| | |||||||| ||||||||    
T  5483406 aaaaaaaaaaaaaatcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac 5483477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 36765688 - 36765734
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  36765688 cttaaagaactttattttaactttgttttaaaatagcttttagaccg 36765734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 4616173 - 4616218
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  4616173 ttaaagagctttattttaattttgttttaaagtattttttagaccg 4616218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 19036402 - 19036362
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  19036402 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 19036362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 20718234 - 20718274
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  20718234 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 20718274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 23154632 - 23154789
Alignment:
Q  15 caccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaaca 114  Q
    ||||| |||| || ||| ||| |||||||||||||||||||||||| | ||||||| | |||| ||| |||||||||        ||||||||||||||     
T  23154632 caccacaaaaaaaaaaaatcatagttttgtacaatattttgccaaacaacttttaacttaaaa-taactttagaactaaaaaaaataaagaaaccaaacg 23154730  T
Q  115 gctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||| |          | |||||| | ||||||||||||||||||||||||||| ||||||||    
T  23154731 gctttaactttt------tccttaaataactttattttaactttgttttaaagtagcttttagac 23154789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 23639378 - 23639341
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtag 170  Q
    |||||||||| |||||||||||||||||||||||||||    
T  23639378 ttcttaaagaactttattttaactttgttttaaagtag 23639341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 29488481 - 29488521
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  29488481 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 29488521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 33232697 - 33232657
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  33232697 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 33232657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 34284839 - 34284799
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  34284839 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 34284799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 5483522 - 5483562
Alignment:
Q  139 aagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  5483522 aagagttttattttaactttgttttaaagtagcttttagac 5483562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 42828847 - 42828799
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| |||||||||||||||||||| |||||  ||||||||||    
T  42828847 ttcttaaagacctttattttaactttgttttgaagtaacttttagaccg 42828799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 39
Target Start/End: Complemental strand, 19758191 - 19758160
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagt 39  Q
    ||||||||||||||||||||||||||||||||    
T  19758191 cagacaccaccaaaaaataataaattcaaagt 19758160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 3840021 - 3840079
Alignment:
Q  22 aaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaata 80  Q
    ||||| || ||||||||||||||||||||||||| |||| | ||||||| | |||||||    
T  3840021 aaatattagattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaata 3840079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 37143542 - 37143584
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||| |||||||||||||| ||||||||||| |||||||    
T  37143542 ttaaagagttttattttaactttattttaaagtagcttttaga 37143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 5526226 - 5526259
Alignment:
Q  145 tttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||||||||||||||||||| |||||||    
T  5526226 tttattttaactttgttttaaagtagcttttaga 5526259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 20762915 - 20762955
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  20762915 aaaaaataataaattcaaag-tttgtacaatattttgtcaaa 20762955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 179
Target Start/End: Original strand, 36769344 - 36769381
Alignment:
Q  142 agctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  36769344 agctttattttaactttgttttaaaatagcttttagac 36769381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 3840137 - 3840169
Alignment:
Q  144 ctttattttaactttgttttaaagtagatttta 176  Q
    ||||||||||||||||||||||||||| |||||    
T  3840137 ctttattttaactttgttttaaagtagctttta 3840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 4491001 - 4490953
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||| |||||  ||||||||||    
T  4491001 ttcttaaaggcctttattttaactttgttttgaagtaatttttagaccg 4490953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 42915464 - 42915500
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagta 169  Q
    |||||||||| |||||||||||||||||||| |||||    
T  42915464 ttcttaaagacctttattttaactttgttttgaagta 42915500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 47171748 - 47171796
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||| |||||  ||||||||||    
T  47171748 ttcttaaaggtctttattttaactttgttttgaagtaacttttagaccg 47171796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 47840841 - 47840881
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagatttt 175  Q
    |||||| ||||||||||||||||||| ||||||||| ||||    
T  47840841 cttaaatagctttattttaactttgtcttaaagtagttttt 47840881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 5e-42; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 54510470 - 54510302
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  54510470 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaaagaa 54510371  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54510370 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54510302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 30269167 - 30268998
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  30269167 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 30269068  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30269067 aaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 30268998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 45599350 - 45599181
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  45599350 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 45599251  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| ||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45599250 aaccaaacagctttggccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 45599181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 29500325 - 29500493
Alignment:
Q  9 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          |||||||    
T  29500325 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaagaa 29500424  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29500425 accaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 29500493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 33932569 - 33932402
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||| |||||||||        ||||||||    
T  33932569 cagacaccaccaaaaaataataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 33932470  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||           |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  33932469 ccaaacagctttag------tctttttcttaaagagctttattttaactttgttttagagtagtttttagaccg 33932402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 22347163 - 22346994
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaata-ttttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| |||||||||| |||||||||         ||||||    
T  22347163 cagacaccaccaaaaaataataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaaga 22347064  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22347063 aaccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 22346994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 7040873 - 7041041
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||         |||||||    
T  7040873 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaactaaaaaaaaataaagaa 7040972  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7040973 accaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7041041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 36592299 - 36592131
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||| |||||||||| |||||||||         |||||||    
T  36592299 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaactaaaaaaaaataaagaa 36592200  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  36592199 accaaacagctttagccttt------ttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 36592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 19536699 - 19536866
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||| |||||||||        ||||||||    
T  19536699 cagacaccagcaaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaactaaaaaaaataaagaaa 19536798  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
     ||||||||||||||          |||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  19536799 tcaaacagctttagccttt------ttcttaaagaactttattttaactttgttttaaattagcttttagaccg 19536866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 4018908 - 4019077
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  4018908 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 4019007  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4019008 aatcaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4019077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 54741795 - 54741966
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaa 103  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||            ||||    
T  54741795 cagacaccaccaaaaaataataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaataaa 54741894  T
Q  104 gaaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  54741895 gaaaccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 54741966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 13450264 - 13450432
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||        ||||||||    
T  13450264 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaactaaaaaaaataaagaaa 13450363  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||| || ||||| |          ||||||||||||||| |||||||||||||||||||||| |||||||    
T  13450364 ccaatcatctttaacctttttttt-ttcttaaagagcttt-ttttaactttgttttaaagtagcttttaga 13450432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 204
Target Start/End: Original strand, 48545101 - 48545293
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||| |||||||||          ||||||    
T  48545101 cagacaccaccaaaaaataataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 48545200  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccgnnnnnnngcctagccaaacggta 204  Q
    ||||||||||||||| |          |||||||||||||||||||||| ||||||||||||||| ||||||||||       ||||||||||||||||    
T  48545201 aaccaaacagctttaaccttt------ttcttaaagagctttattttaattttgttttaaagtagcttttagaccgaaaagaagcctagccaaacggta 48545293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 52674775 - 52674942
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||| |||         |||||||    
T  52674775 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacag-ttttaactcaaaaataactttagtactacaaaaaaataaagaa 52674873  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52674874 accaaacagctttaactttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52674942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 26881613 - 26881780
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| |||||||||| |||||||||        |||| |||    
T  26881613 cagacaccacaaaaaaataataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaactaaaaaaaataaataaa 26881712  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||| ||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26881713 ccaaacaactttaactttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 26881780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 14587470 - 14587301
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||          ||||||    
T  14587470 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaaataaaga 14587371  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |||| ||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14587370 aatcaaatagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 14587301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 39721252 - 39721418
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||    
T  39721252 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaac 39721351  T
Q  109 caaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||           | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39721352 caaacagctttag------ttttttccttaaagagctttattttaactttgttttaaagtagtttttagaccg 39721418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 53022669 - 53022826
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaaacagct 117  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| |||||||||         ||||||||||||||||||    
T  53022669 aaaaaataataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaaccaaacagct 53022768  T
Q  118 ttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || ||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53022769 ttggccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 53022826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 7265047 - 7265215
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| ||||  |||||||| |||||||||| |||||||||         |||||||    
T  7265047 cagacaccacaaaaaaataataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 7265146  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| |||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7265147 accaaacaactttagctttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7265215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 50739157 - 50739313
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||||||||||||    
T  50739157 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaactaaaaaaaataaagaaaccaaacagctt 50739256  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||          |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  50739257 tagctttt------ttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50739313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 50773698 - 50773542
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||||||||||||    
T  50773698 aaaaaataataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaactaaaaaaaataaagaaaccaaacagctt 50773599  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||          |||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  50773598 tagctttt------ttcttaaagagctttattttaactttattttaaagtagcttttagaccg 50773542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 52461019 - 52461188
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  52461019 cagacaccacgaaaaaattataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 52461118  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || ||||||| |||||           |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52461119 aatcaaacagttttag------tctttttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 52461188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 178
Target Start/End: Original strand, 29450651 - 29450817
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| ||||||| |          ||||||    
T  29450651 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaattaaaaaaaaaataaaga 29450750  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||||||||||| |          |||||||||| ||||||||||||||||||||||||||| |||||||    
T  29450751 aaccaaacagctttaaccttt------ttcttaaagaactttattttaactttgttttaaagtagcttttaga 29450817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 2909424 - 2909592
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||||| ||||||| |          ||||||    
T  2909424 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaattaaaaaacaaataaaga 2909523  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||||||||||| |          | ||| |||||||||||||||||||||||||||||||| ||||||||    
T  2909524 aaccaaacagctttaacctttt-----tccttgaagagctttattttaactttgttttaaagtagcttttagac 2909592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 36987810 - 36987654
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || |||||||||||||||||||||||||||||||| | ||||||| | |||||||| ||||||| |        |||||||||||||||||||    
T  36987810 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaattaaaaaaaataaagaaaccaaacagctt 36987711  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36987710 taactttt------ttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 36987654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 37013249 - 37013093
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || |||||||||||||||||||||||||||||||| | ||||||| | |||||||| ||||||| |        |||||||||||||||||||    
T  37013249 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaattaaaaaaaataaagaaaccaaacagctt 37013150  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37013149 taactttt------ttcttaaagagctttattttaactttgttttaaagtagtttttagaccg 37013093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 20849484 - 20849404
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||||    
T  20849484 acaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 46757551 - 46757633
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  46757551 cagacaccaccaaaaaataataaattcaaagttta-tacaatattttgccaaacagcttttaactcaaaaataactttagaact 46757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 12101545 - 12101377
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| | |||||||| |||||||||         ||  |||||    
T  12101545 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaactaaaaaaataaagaaaacc 12101446  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||             ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  12101445 aaacagcttt---gtttttttttttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 12101377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 43316598 - 43316516
Alignment:
Q  9 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  43316598 agacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 48961122 - 48961276
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||||||||||||||| ||||||||| |||| | ||||||| | |||||||| |||||||          |||||||| ||||||||||    
T  48961122 aaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa--aaaaataataaagaaatcaaacagctt 48961219  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48961220 tagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 48961276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 38361743 - 38361854
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||| | ||||||| | |||||||| |||||||||        |||||||||    
T  38361743 gacaccaccaaaaaaataataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaac 38361842  T
Q  109 caaacagcttta 120  Q
    ||||||||||||    
T  38361843 caaacagcttta 38361854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 41990836 - 41990680
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||| ||||||| |||||||||||||||||| | ||||||| | |||||||| |||||||||        ||||||||||||||| |||    
T  41990836 aaaaaataataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaactagaaaaaataaagaaaccaaacaactt 41990737  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          |||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  41990736 taactttt------ttcttatagaactttattttaactttgttttaaagtagcttttagaccg 41990680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 42187833 - 42187665
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaa 106  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||||||||| | ||||||| | |||||||| |||| ||||        |||||||    
T  42187833 cagacaccaccaaaaaaataataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttataactaaaaaaaataaagaa 42187734  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          || |||||| ||||||||| |||||||||||||||||| ||||| ||||    
T  42187733 accaaacagctttagccttt------tttttaaagggctttatttaaactttgttttaaagtagcttttaaaccg 42187665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 15496541 - 15496362
Alignment:
Q  20 aaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaaccaaacagctt 118  Q
    ||||| || |||||||||||||||||||||||||||||||| | ||| ||  | |||||||| |||||||||         |||||||||||||||||||    
T  15496541 aaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaactaaaaaaaaataaagaaaccaaacagctt 15496442  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccgnnnnnnngcctagccaaacggta 204  Q
    |||           |||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||    
T  15496441 tagttttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccgaaaaaaagcctagccaaacggta 15496362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 47719487 - 47719641
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||||||| | |||||||| ||||||| |        |||||||| |||| |||||    
T  47719487 aaaaaataataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaattaaaaaaaataaagaaatcaaatagctt 47719586  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    || |          | |||||||||||||||||||||||||||||||||||| ||||||||    
T  47719587 taactttt------tccttaaagagctttattttaactttgttttaaagtagcttttagac 47719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 35906766 - 35906654
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| |||  | ||||||||| ||||||||||||||||||        ||||||||     
T  35906766 gacaccaccaaaaaaataatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaactaaaaaaaataaagaaat 35906667  T
Q  109 caaacagctttag 121  Q
    |||||||||||||    
T  35906666 caaacagctttag 35906654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 54203828 - 54203746
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||| | ||||||||| |||||||| |||||||||    
T  54203828 gacaccaccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 54203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 35690293 - 35690212
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||| | |||||||| |||||||||    
T  35690293 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 44762795 - 44762694
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| ||||||| |        |||||||||||||||||||    
T  44762795 aaaatataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaattaaaaaaaataaagaaaccaaacagctt 44762696  T
Q  119 ta 120  Q
    ||    
T  44762695 ta 44762694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 46090190 - 46090118
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||| ||||    
T  46090190 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaact 46090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 13337091 - 13337173
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | | ||||| | |||||||| |||||||||    
T  13337091 cagacaccacaaaaaaataataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 176
Target Start/End: Original strand, 37413560 - 37413724
Alignment:
Q  8 cagacaccaccaa-aaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaaga 105  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| | ||| ||| | |||||||| |||| ||||         || |||    
T  37413560 cagacaccaccaagaaaataataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactttataactaaaagaaaatataga 37413659  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    |||||||||||||||||          |||||||||  ||||||||||||||||||||||||||| |||||    
T  37413660 aaccaaacagctttagctttt------ttcttaaaggactttattttaactttgttttaaagtagctttta 37413724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 54113415 - 54113577
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaaacagct 117  Q
    ||||||||||||||| ||||||||||||||||||||| |||| | ||||||| | |||||||| |||| ||||         |||| |||||||||| ||    
T  54113415 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttataactaaaaaaaaataaacaaaccaaacaact 54113514  T
Q  118 ttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||          |||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  54113515 ttagcttagctttt-ttcttaaaggactttattttaactttgttttaaagtagtttttagaccg 54113577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 54195754 - 54195682
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  |||||| | ||||||||||| ||||||    
T  54195754 aaaaaataataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataatttcagaact 54195682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 875879 - 875926
Alignment:
Q  134 tcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  875879 tcttaaagagctttattttaactttgttttaaagtagcttttagaccg 875926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 20996406 - 20996305
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || ||||||||| ||||||||||||||||| |||| | ||||||||| |||||||| |||||||||        |||||||| ||||||||||    
T  20996406 aaaaaaaaaaaaattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaactaaaaaaaataaagaaatcaaacagctt 20996307  T
Q  119 ta 120  Q
    ||    
T  20996306 ta 20996305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 46850783 - 46850722
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaata 80  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||||| | |||||||    
T  46850783 aaaaaataataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaata 46850722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 54203712 - 54203667
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  54203712 cttaaagagctttattttaactttgttttaaagtagcttttagacc 54203667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 875825 - 875884
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaa 70  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||| |||| ||||    
T  875825 cagacaccaccaaaaaata---aattcaaagttttgtacaatattttgccaaacagctcttaa 875884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 33899842 - 33899986
Alignment:
Q  31 attcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnnnnnn 130  Q
    ||||||||||| ||| |||||||||||||| | ||||||| | |||||||| |||| ||||        |||||||||||||||| ||||||            
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactttataactaaaaaaaataaagaaaccaaacagttttagctttt---- 33899937  T
Q  131 ncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
      |||||||| | ||||||||||||||||||||||||||  ||||||||||    
T  33899938 --ttcttaaaaaactttattttaactttgttttaaagtaacttttagaccg 33899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 50933196 - 50933279
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||| || ||||||||||||||| ||| |||||||||||||||||  ||| ||||||||| | |||||||| |||| ||||    
T  50933196 cagacacaacaaaaaaataataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactttataact 50933279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 35529818 - 35529773
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  35529818 ttaaagggctttattttaactttgttttaaagtagcttttagaccg 35529773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 12996893 - 12996822
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa 81  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||| ||||| | ||||||| | ||||||||    
T  12996893 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatatttttccaaacaacttttaacttaaaaataa 12996822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 46757672 - 46757720
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  46757672 ttcttaaaaagctttattttaactttgttttaaagtagcttttaaaccg 46757720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 46850676 - 46850630
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  46850676 ttcttaaagacctttattttaactttgttttaaaatagcttttagac 46850630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 44075456 - 44075416
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  44075456 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 44075416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 10617639 - 10617695
Alignment:
Q  35 aaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    |||||||||||||||||||||||||| | ||||||| | ||||||| ||||| ||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaatagttttaaaact 10617695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 10617736 - 10617768
Alignment:
Q  137 taaagagctttattttaactttgttttaaagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  10617736 taaagagctttattttaactttgttttaaagta 10617768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 34433503 - 34433455
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||| |||||||||||||||||| ||||||||||    
T  34433503 ttcttaaaggactttatttaaactttgttttaaagtagcttttagaccg 34433455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 34433803 - 34433767
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttg 55  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34433803 aaaaaataataaattaaaagttttgtacaatattttg 34433767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 38361874 - 38361910
Alignment:
Q  145 tttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||| ||||||||||    
T  38361874 tttattttaactttgttttaaagtagcttttagaccg 38361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 44541229 - 44541277
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| |||||||||||||||||||||||  || ||||||||||    
T  44541229 ttcttaaagaactttattttaactttgttttaaaagagcttttagaccg 44541277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 54796002 - 54795955
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    |||||||||| |||||||||||||||||||| |||||  |||||||||    
T  54796002 ttcttaaagacctttattttaactttgttttgaagtaacttttagacc 54795955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 916278 - 916315
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgcc 57  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  916278 aaaaaataataaattcaaag-tttgtacaatattttgcc 916315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 35690164 - 35690122
Alignment:
Q  139 aagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||| ||||||||||||||||||||||||||  ||||||||||    
T  35690164 aagaactttattttaactttgttttaaagtaacttttagaccg 35690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 42617826 - 42617780
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatatttt 54  Q
    ||||| ||| |||||||||||||||| ||| ||||||||||||||||    
T  42617826 cagacgccatcaaaaaataataaatttaaatttttgtacaatatttt 42617780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 46088782 - 46088720
Alignment:
Q  29 aaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||| |||||||||||||||||||| ||||| | ||||| | | |||||||| |||||||||    
T  46088782 aaattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 46090078 - 46090037
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    ||||||| ||||| |||||||||||||||||||||| |||||    
T  46090078 cttaaagcgctttgttttaactttgttttaaagtagctttta 46090037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 54835729 - 54835790
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaata 80  Q
    |||||| || ||| ||||| |||||||||||||||||||||| | ||||||| | |||||||    
T  54835729 aaaaaaaaaaaaaatcaaaattttgtacaatattttgccaaacaacttttaacttaaaaata 54835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 32754257 - 32754305
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||| |||||  ||||||||||    
T  32754257 ttcttaaaggcctttattttaactttgttttgaagtaacttttagaccg 32754305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 52464930 - 52464882
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||| |||||  ||||||||||    
T  52464930 ttcttaaaggtctttattttaactttgttttcaagtaacttttagaccg 52464882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 1465 - 1632
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  1465 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 1564  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||||    
T  1565 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagacc 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 24758971 - 24759138
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  24758971 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 24759070  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||||    
T  24759071 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagacc 24759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 2475357 - 2475189
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  2475357 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 2475258  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| |||||||||          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  2475257 accaaatagctttagccttt------ttcttaaagaactttattttaactttgttttaaagtagtttttagaccg 2475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 24027943 - 24027775
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||         |||||||    
T  24027943 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagagctaaaaaaaaataaagaa 24027844  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24027843 accaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 24027775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 3297908 - 3297740
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||| ||||||| |         |||||||    
T  3297908 cagacaccaccaaaaaataataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaattacaaaaaaataaagaa 3297809  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3297808 accaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 3297740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 16050857 - 16050689
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  16050857 cagacaccaccaaaaaataataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 16050758  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||          |||||||||| ||||||||||||||||||||||| ||| ||||||||||    
T  16050757 accaaacagctttagccttt------ttcttaaagaactttattttaactttgttttaaaatagcttttagaccg 16050689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 179
Target Start/End: Complemental strand, 27176560 - 27176393
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaaga 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||         ||||||    
T  27176560 cagacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaactaaaaaaaaataaaga 27176461  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||||||||||||          |||||||||||||||||||||||||||||||||| ||  ||||||||    
T  27176460 aaccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaaataccttttagac 27176393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 31939918 - 31939749
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||          ||||||    
T  31939918 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 31939819  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  31939818 aaccaaacaactttagccttt------ttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 31939749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 31884745 - 31884580
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         ||||||||||    
T  31884745 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaacc 31884646  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          |||||| |||| |||||||||||||| ||||||||||| ||||||||||    
T  31884645 aaacagctttagccttt------ttcttatagagttttattttaactttattttaaagtagcttttagaccg 31884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 4374940 - 4374769
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||| |||||||||            ||||    
T  4374940 cagacaccaccaaaaaataataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaactaaaaaaaaaaaataaa 4374841  T
Q  104 gaaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4374840 gaaaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 4374769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 25821231 - 25821377
Alignment:
Q  27 ataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagcnnnn 126  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||||||||| |||||||        
T  25821231 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaaccaaacaactttagccttt 25821330  T
Q  127 nnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
          |||||||||||||||||||||||||||||||||||||| ||||||||    
T  25821331 ------ttcttaaagagctttattttaactttgttttaaagtagcttttagac 25821377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 26379203 - 26379374
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaa 103  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||||            ||||    
T  26379203 cagacaccaccaaaaaataataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaacttaaaaaaaaaaataaa 26379302  T
Q  104 gaaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||          |||||| ||||||||||||||||||||||||||||||| || |||||||    
T  26379303 gaaaccaaacagctttagccttt------ttcttagagagctttattttaactttgttttaaagtagcttgtagaccg 26379374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 42110679 - 42110843
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||||          ||||||||    
T  42110679 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaactaaaaaaaaaataaagaaa 42110778  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||||||||          |||||||||| ||||||||||||||| ||||||||||| |||||||    
T  42110779 ccaaacagctttagccttt------ttcttaaagaactttattttaactttattttaaagtagcttttaga 42110843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 6928443 - 6928360
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  6928443 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 5589550 - 5589382
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| |||| ||||||||| |||||||||| |||||||||          ||||||    
T  5589550 cagacaccaccaaaaaatgataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 5589451  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||          |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  5589450 aaccaaacagctttagccttt------ttcttaaagagcttta-tttaactttgttttaaagtagcttttagaccg 5589382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 42322865 - 42323031
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||| |||||||||         |||||||    
T  42322865 cagacaccatcaaaaaataataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaactaaaaacaaataaagaa 42322964  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||| |||||||          |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  42322965 accaaacaactttagccttt------ttctcaaagagctttattttaactttgttttaaagtagcttttagac 42323031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 665642 - 665476
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaac 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| |||||||||| |||||||||          |||||||||    
T  665642 acaccaccaaaaaataataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaagaaac 665543  T
Q  109 caaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||| ||||||           |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  665542 caaacaactttag------tctttttcttaaagagctttattttaaatttgttttaaagtagcttttagaccg 665476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 180
Target Start/End: Complemental strand, 32261798 - 32261632
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||| |||||||||         |||||||    
T  32261798 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 32261699  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||  ||||||          |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  32261698 accaaaca-atttagccttt------ttctgaaagagctttattttaactttgttttaaagtagcttttagacc 32261632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 29874750 - 29874584
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| |||| | ||||||| | |||||||| | |||||||        |||||||||    
T  29874750 gacaccaccaaaaaaataataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactatagaactaaaaaaaataaagaaac 29874651  T
Q  109 caaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||          |||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  29874650 caaacagctttagctttt------ttcttaaagaactttatttttactttgttttaaagtagcttttagaccg 29874584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 13 - 181
Target Start/End: Original strand, 15976476 - 15976640
Alignment:
Q  13 accaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaacca 110  Q
    |||||||||||| || | |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||          |||||||||||    
T  15976476 accaccaaaaaaaaaaagattcaaagatttgtacaatattttgccaaacagcttttaactcaaaaataattttagaactaaaaaaaaaataaagaaacca 15976575  T
Q  111 aacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||          || |||||||||||||||||||||||||||||||||   ||||||||||    
T  15976576 aacagctttagccttt------tttttaaagagctttattttaactttgttttaaagtgacttttagaccg 15976640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 19361641 - 19361805
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||| |||||||||| || ||| |||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        ||||||||||    
T  19361641 gacatcaccaaaaaaaaaaaaaatcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaacc 19361740  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||          | ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  19361741 aaacagctttagctttt------tccttaaagagctttattttaaccttgttttaaagtag-ttttagaccg 19361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 29383811 - 29383642
Alignment:
Q  8 cagacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaaga 105  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||| |||| ||||||||| |||||||||| | |||||||         ||||||    
T  29383811 cagacaccaccaaaaaaataataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataactatagaactaaaaaaaaataaaga 29383712  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29383711 aaccaaacaactttagccttt------ttcttaaagacctttattttaactttgttttaaagtagcttttagaccg 29383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 789108 - 789026
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||    
T  789108 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 2530075 - 2530242
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||          |||||||    
T  2530075 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactgaaaaaaaaataaagaa 2530174  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||  |||| |          | |||||||||||||||||||||||||||||||||||| |||||||||    
T  2530175 accaaacaattttaactttt------tccttaaagagctttattttaactttgttttaaagtagcttttagacc 2530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 39803934 - 39803824
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| | | ||||| | |||||||| |||||||||        ||||||||||    
T  39803934 gacacaaccaaaaaataataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact--aaaaaataaagaaacc 39803837  T
Q  110 aaacagctttagc 122  Q
    |||||||||||||    
T  39803836 aaacagctttagc 39803824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 28746390 - 28746235
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||| ||||||| ||    
T  28746390 aaaaaataataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaatcaaacagttt 28746291  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    || |          | |||||||||||||||||||||||||||||||||||  |||||||||    
T  28746290 tacctttt------tccttaaagagctttattttaactttgttttaaagtaacttttagacc 28746235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 36083790 - 36083948
Alignment:
Q  15 caccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaaac 113  Q
    ||||| |||| || |||||||||||||||||||||||||||||||| ||||||||  | |||||||| |||||||||         ||||||||||||||    
T  36083790 caccacaaaaaaaaaaattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaactaaaaaaatataaagaaaccaaac 36083889  T
Q  114 agctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||          ||||||||| |||||||||||||||| ||||||||||| |||||||    
T  36083890 agctttagccatt------ttcttaaagggctttattttaactttattttaaagtagtttttaga 36083948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 11 - 181
Target Start/End: Complemental strand, 790142 - 789977
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||  |||| | ||||||| | |||||||| |||||||||        ||||||||||    
T  790142 acaccaccaaaaaaataataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaacc 790043  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||| || |||| |          |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  790042 aaatagttttaactttt------ttcttaaagagctttattttaactttgttttaaagtaccttttagaccg 789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 40308340 - 40308412
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| | |||||||| |||||||||    
T  40308340 aaaaaataataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 36088567 - 36088736
Alignment:
Q  9 agacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||||| | | |||||||| ||||||| |         |||||||    
T  36088567 agacaccaccaaaaaaataataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaaataaaaaaaaataaagaa 36088666  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||  |||||||          ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  36088667 accaaacgactttagccttct-----ttcttaaagggctttattttaactttgttttaaagtagcttttagaccg 36088736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 8314829 - 8314987
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaaccaaacagc 116  Q
    ||||||||||||||||||||||||||| |||||||||| ||| | ||||||| | ||||||||||||||||||          |||| |||||||||| |    
T  8314829 aaaaaataataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaactaaaaaaaaattaaaaaaaccaaacaac 8314928  T
Q  117 tttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||           | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  8314929 tttag------ttttttccttaaagagctttattttaactttgttttaaagtagcttttagaccg 8314987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 180
Target Start/End: Original strand, 3246819 - 3246985
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaa 107  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||||||||| | ||| ||| | |||||||| |||||||||         ||||||||    
T  3246819 gacaccaccaaaaaaataataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaactaaaaaaaaataaagaaa 3246918  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||||||| |          | ||||||||| |||||||||||||||||||||||||| |||||||||    
T  3246919 ccaaacagctttaactttt------tccttaaagagttttattttaactttgttttaaagtagcttttagacc 3246985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 16166354 - 16166292
Alignment:
Q  29 aaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||    
T  16166354 aaattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 42111877 - 42111726
Alignment:
Q  23 aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctttagc 122  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||| | || ||||| |||| ||||        |||||||| ||||||| |||| |    
T  42111877 aataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactttataactaaaaaaaataaagaaatcaaacagttttaac 42111778  T
Q  123 nnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
              | |||||||| ||||||||||||||||||||||||||| |||||||||    
T  42111777 tttt------tccttaaagaactttattttaactttgttttaaagtagcttttagacc 42111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 43396524 - 43396680
Alignment:
Q  23 aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||||||||||||||||||||||| | ||| ||| | |||||||| |||||||||             ||| ||||||||||||||    
T  43396524 aataataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaactaaagaaaaaaaaaaaaaaaaccaaacagctt 43396623  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  43396624 tagctttt------tccttaaagagctttattttaactttgttttaaagtagtttttagaccg 43396680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 10042782 - 10042863
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaac 90  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||||||| | |||||||| || |||||    
T  10042782 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaac 10042863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 30503613 - 30503448
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaa 107  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||| |||||  |||||| | |||||||| |||||||||          ||||||||    
T  30503613 acaccaccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaactaaaaaaaaattaaagaaa 30503514  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||| ||||| |          ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  30503513 ccaaacaactttaactttt------ttcttaaagagttttattttaactttgttttaaagtagcttttagac 30503448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 30543956 - 30543791
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaa 107  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||| |||||  |||||| | |||||||| |||||||||          ||||||||    
T  30543956 acaccaccaaaaaaataataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaactaaaaaaaaattaaagaaa 30543857  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||| ||||| |          ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  30543856 ccaaacaactttaactttt------ttcttaaagagttttattttaactttgttttaaagtagcttttagac 30543791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 14205522 - 14205570
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14205522 ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 14205570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 28991022 - 28990970
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  28991022 cagacaccatcataaaataataaattcaaagttttgtacaatattttgccaaa 28990970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 40506884 - 40506812
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa 81  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||| | ||||||||    
T  40506884 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataa 40506812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 179
Target Start/End: Original strand, 42416790 - 42416955
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaa 107  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  ||| | ||||||| | |||||||| |||||||           ||||||||    
T  42416790 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaataaaaaaaaaataaagaaa 42416889  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    ||||||| ||||| |          ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  42416890 ccaaacaactttaactttt------ttcttaaagggctttattttaactttgttttaaagtagcttttagac 42416955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 10042908 - 10042954
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  10042908 cttaaagagctttattttaactttgttttaaagtagcttttagaccg 10042954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 37147067 - 37147168
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || |||||| ||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||| ||||||||||    
T  37147067 aaaaaaaaaaaaattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaaacaaacagctt 37147166  T
Q  119 ta 120  Q
    ||    
T  37147167 ta 37147168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 30503721 - 30503673
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  30503721 ttcttaaagagctttattttaactttgttttaaagttgcttttagaccg 30503673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 30544064 - 30544016
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  30544064 ttcttaaagagctttattttaactttgttttaaagttgcttttagaccg 30544016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 7536645 - 7536800
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaaccaaacagc 116  Q
    |||||| || |||||||| ||||||||||||||||||| ||| | ||||||| | |||||||| |||||||||          ||||||||||||||| |    
T  7536645 aaaaaaaaaaaaattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaactaaaaaaaaaataaagaaaccaaacaac 7536744  T
Q  117 tttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||          | |||||||| ||||||||||||||||||||||||||| |||||||    
T  7536745 tttagctttt------tccttaaagaactttattttaactttgttttaaagtagcttttaga 7536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 19270905 - 19270946
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  19270905 aaaaaataataaattcaaagttttgtataatattttgccaaa 19270946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 31958344 - 31958299
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||    
T  31958344 cttaaagagttttattttaactttgttttaaagtagtttttagacc 31958299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 31958465 - 31958394
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa 81  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| |||| | ||||||| | ||||||||    
T  31958465 gacaccaccaaaaaagtaataaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaataa 31958394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 29382659 - 29382576
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaag-ttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| ||||||||| |||  |||||||| ||||||||||||| | ||||||| | |||||||| |||||||||    
T  29382659 gacaccaccaaaaaaataataaatttaaaaattttgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 39783070 - 39783116
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  39783070 cttaaagaactttattttaactttgttttaaagtagcttttaaaccg 39783116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 15875712 - 15875675
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtag 170  Q
    |||||||||| |||||||||||||||||||||||||||    
T  15875712 ttcttaaagacctttattttaactttgttttaaagtag 15875675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 16488089 - 16488044
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||    
T  16488089 cttaaagaactttattttaactttattttaaagtagcttttagacc 16488044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 28887173 - 28887226
Alignment:
Q  8 cagacaccaccaaaaaataataaa-ttcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||| || ||||||||||| || ||||||||||||||||||||||||||    
T  28887173 cagacaccatcataaaataataaaatttaaagttttgtacaatattttgccaaa 28887226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 37461872 - 37461912
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  37461872 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 37461912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 788987 - 788943
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||    
T  788987 cttaaagagctttattttaagtttgttttaaagtaacttttagac 788943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 3213196 - 3213148
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| |||||||||||||||||||| |||||  ||||||||||    
T  3213196 ttcttaaagacctttattttaactttgttttgaagtaacttttagaccg 3213148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 14720185 - 14720221
Alignment:
Q  24 ataataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14720185 ataataaattcaaagttttgtacaatattttcccaaa 14720221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 40506762 - 40506719
Alignment:
Q  137 taaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    ||||||| |||||||||||||||||||||| ||| |||||||||    
T  40506762 taaagagttttattttaactttgttttaaaatagcttttagacc 40506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 1060706 - 1060766
Alignment:
Q  20 aaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataa 81  Q
    ||||||||||||||||||| |||||||||||||||| |||| |  |||||| | ||||||||    
T  1060706 aaaaataataaattcaaag-tttgtacaatattttgtcaaacaatttttaacttaaaaataa 1060766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 2463637 - 2463682
Alignment:
Q  15 caccaaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    ||||| |||| || ||||||||||||||||||||||||||| ||||    
T  2463637 caccacaaaaaaaaaaattcaaagttttgtacaatattttgtcaaa 2463682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 14720307 - 14720340
Alignment:
Q  148 attttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||||||| ||||||||||    
T  14720307 attttaactttgttttaaagtagtttttagaccg 14720340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 28887299 - 28887336
Alignment:
Q  144 ctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  28887299 ctttattttaactttgttttaaagtaacttttagaccg 28887336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  30 aattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||| |||||||| |||||||||||||| | ||||||| | |||| ||| |||||||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 36515012 - 36514975
Alignment:
Q  144 ctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||| || ||||||||||    
T  36515012 ctttattttaactttgttttaaaggagcttttagaccg 36514975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 14205433 - 14205485
Alignment:
Q  39 ttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||| |||||||||||||| | ||||||| | |||||||| |||||||||    
T  14205433 ttttgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 28869452 - 28869500
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  ||| ||||||| ||||||||||| ||||||||||||||    
T  28869452 ttcttaaagcccttaattttaaatttgttttaaaatagattttagaccg 28869500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 1835677 - 1835844
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         ||| |||    
T  1835677 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaaaaaaa 1835776  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||| |||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1835777 ccaaacaactttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 1835844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 970945 - 971114
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  970945 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 971044  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  971045 aaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 971114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 8878111 - 8878280
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  8878111 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 8878210  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8878211 aaccaaacagctttaaccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8878280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 7274664 - 7274831
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaaa 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||||    
T  7274664 gacaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaagaaa 7274763  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7274764 ccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7274831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 31972274 - 31972442
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         |||||||    
T  31972274 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaa 31972373  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  31972374 accaaacagctttaacattt------ttcttaaagagctttattttaactttgttttaaagtagcttttaaaccg 31972442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 36086030 - 36085861
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  36086030 cagacaccaccaaaaagtaataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaataaataaaga 36085931  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  36085930 aaccaaacagctttagccttt------ttcttaaagatctttattttaactttgttttaaagtagcttttagaccg 36085861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 24926165 - 24926005
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaacc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||         ||||||||||    
T  24926165 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaacc 24926066  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    |||||||||||||          |||||||||||||||||||||||||||||| ||||||| |||||    
T  24926065 aaacagctttagccttt------ttcttaaagagctttattttaactttgtttaaaagtagctttta 24926005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 9 - 181
Target Start/End: Original strand, 8683652 - 8683819
Alignment:
Q  9 agacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||         ||||||||    
T  8683652 agacaccaccaaaaaataataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaataaagaaa 8683751  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||| |||||| ||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8683752 ccaaatagctttggccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 8683819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 18166916 - 18166749
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaa 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||        ||||||||    
T  18166916 cagataccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaataaagaaa 18166817  T
Q  108 ccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    | |||||||||||||          || ||||||| ||||||||||||||||||||||||||  ||||||||||    
T  18166816 cgaaacagctttagccttt------tttttaaagaactttattttaactttgttttaaagtaacttttagaccg 18166749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 5166258 - 5166427
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||          ||||||    
T  5166258 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 5166357  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||  |          |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  5166358 aaccaaacagcttttaccttt------ttcttaaagagctttattttaactttgttttaaagtagctttttgaccg 5166427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 3324347 - 3324178
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaaga 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||| |||||||||| |||||||||          ||||||    
T  3324347 cagacaccaccaaaaaataataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaaga 3324248  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||| |          || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3324247 aaccaaacagctttaaccttt------tttttaaagagctttattttaactttgttttaaagtagcttttagaccg 3324178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 7233015 - 7233098
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||    
T  7233015 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 178
Target Start/End: Original strand, 4631203 - 4631369
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-----nnnnnnnntaaaga 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |             ||||||    
T  4631203 acaccacaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaattaaaaaaaataaaataaaga 4631302  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||||||||||          |||||||||||||||||||||||||||||||||||||| |||||||    
T  4631303 aaccaaacagctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttaga 4631369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 3079720 - 3079876
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||||||||||| ||||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||||||||| ||    
T  3079720 aaaaaataataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaactaaaaaaaataaagaaaccaaacagttt 3079819  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  3079820 tagctttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 3243377 - 3243209
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact--nnnnnnnntaaagaa 106  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||          |||||||    
T  3243377 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaaaataaagaa 3243278  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||| |          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  3243277 accaaacagctttacctttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 3243209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 10 - 181
Target Start/End: Complemental strand, 668375 - 668206
Alignment:
Q  10 gacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaaga 105  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||| |||||||| |||||||||            ||||||    
T  668375 gacaccaccaaaaaataataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaactaaaaaaaaaaaataaaga 668276  T
Q  106 aaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||          |||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  668275 aaccaaacaactttagctttt------ttcttaaagaactttattttaactttgttttaaagtagcttttagaccg 668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 34912654 - 34912810
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| ||||||| |        ||||||||||||||| |||    
T  34912654 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaattaaaaaaaataaagaaaccaaacaactt 34912753  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  34912754 taactttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 34912810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 40202218 - 40202374
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||| ||||||||||||||||||||||| || | ||||||| | |||||||| |||||||||        ||||||||||||||| |||    
T  40202218 aaaaaataataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaactagaaaaaataaagaaaccaaacaactt 40202317  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  40202318 taactttt------tccttaaagagctttattttaactttgttttaaagtagcttttagaccg 40202374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 181
Target Start/End: Complemental strand, 17032896 - 17032728
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnnt-aaagaa 106  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||||||||| | ||||||| | |||||||| |||| ||||        | ||||||    
T  17032896 cagacaccacaaaaaaaaaaaaaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttaaaactaaaaaaaattaaagaa 17032797  T
Q  107 accaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||| ||||| |          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17032796 accaaacaactttaactttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17032728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 36078637 - 36078481
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaacc 109  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||| | |||||||| |||||||||         ||||||| |    
T  36078637 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaactaaaaaa---aaagaaatc 36078541  T
Q  110 aaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagatttta 176  Q
    |||||||||||||          || ||||||||||||||||||||||||||||||||||| |||||    
T  36078540 aaacagctttagcttt-------tttttaaagagctttattttaactttgttttaaagtagctttta 36078481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 38879129 - 38879240
Alignment:
Q  10 gacaccaccaaaa-aataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaac 108  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| | ||||||| | |||||||| |||||||||        |||||||||    
T  38879129 gacaccaccaaaaaaataataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaac 38879228  T
Q  109 caaacagcttta 120  Q
    |||||| |||||    
T  38879229 caaacaacttta 38879240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 45474725 - 45474881
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || |||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        |||| ||||||||||||||    
T  45474725 aaaaaaaaaaaaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaactaaaaaaaataaataaaccaaacagctt 45474824  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          | |||||||||||||||||||||||| |||||||||| |||||||||||    
T  45474825 taacttttt-----tccttaaagagctttattttaactttattttaaagta-attttagaccg 45474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 45 - 181
Target Start/End: Complemental strand, 20313294 - 20313162
Alignment:
Q  45 acaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn--taaagaaaccaaacagctttagcnnnnnnnnncttcttaaaga 142  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||          |||||||||||||||||||||||          ||||||||||    
T  20313294 acaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaataaagaaaccaaacagctttagccttt------ttcttaaaga 20313201  T
Q  143 gctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  20313200 gctttattttaactttgttttaaagtaacttttagaccg 20313162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 1117981 - 1118136
Alignment:
Q  19 aaaaaataataaattcaaagttt--tgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagc 116  Q
    ||||||||||||||||||||||   |||||||||||||| |||| | ||||||| | |||||||| |||||||||        ||||||||| |||||||    
T  1117981 aaaaaataataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaactaaaaaaaataaagaaactaaacagc 1118080  T
Q  117 tttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    ||||||          | ||||||||| |||||||||||||||||||||||||| |||||||    
T  1118081 tttagctttt------tccttaaagagttttattttaactttgttttaaagtagcttttaga 1118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 35423789 - 35423939
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    ||||||||||||||| |||||||||||||| ||||||||||| | ||||||| | |||||||| || ||||||        ||||||||||||||| |||    
T  35423789 aaaaaataataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaactaaaataaataaagaaaccaaacaactt 35423888  T
Q  119 tagcnnnnnnnnncttctt-aaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |             ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  35423889 t-------------ttctttaaagagctttattttaactttgttttaaagtagcttttagaccg 35423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 41452818 - 41452974
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnntaaagaaaccaaacagctt 118  Q
    |||||| || ||||| |||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||        ||||||||||||||| |||    
T  41452818 aaaaaaaaaaaaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactagaaaaaataaagaaaccaaacaactt 41452917  T
Q  119 tagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    || |          | ||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  41452918 taactttt------tccttaaagagttttattttaactttgttttaaagtagctttaagaccg 41452974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 10120612 - 10120684
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| ||||||||||||||||||||| |||| | ||||||| | |||||||| |||||||||    
T  10120612 aaaaaataataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 10120684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 17051112 - 17051064
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17051112 ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 17051064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 38959687 - 38959564
Alignment:
Q  48 atattttgccaaatagcttttaattcaaaaataattttagaactnnnnnnnn-taaagaaaccaaacagctttagcnnnnnnnnncttcttaaagagctt 146  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||         ||||||||||||||| |||||||          ||||||||||||||    
T  38959687 atattttgtcaaacagcttttaactcaaaaataattttagaactaaaaaaaaataaagaaaccaaacaactttagccttt------ttcttaaagagctt 38959594  T
Q  147 tattttaactttgttttaaagtagatttta 176  Q
    |||||||||||||||||||||||| |||||    
T  38959593 tattttaactttgttttaaagtagctttta 38959564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 17051221 - 17051169
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||||||    
T  17051221 cagacaccacaaaaaaataataaattctatgttttgtacaatattttgccaaa 17051169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 9799405 - 9799346
Alignment:
Q  11 acaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaa 70  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| |||| | |||||||    
T  9799405 acaccactaaaaaataataaattcaaagttttatacaatattttgtcaaacaacttttaa 9799346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 2180011 - 2180093
Alignment:
Q  10 gacaccaccaaaaaataataaat-tcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| || |||  ||||||||||||| |||||||||| ||| | ||||||| | |||||||| |||||||||    
T  2180011 gacaccaccaaaaaaaaaaaaaaatcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

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Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 9799285 - 9799239
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagac 179  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||||    
T  9799285 ttctcaaagagctttattttatctttgttttaaagtagcttttagac 9799239  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 10120724 - 10120770
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  10120724 cttaaagagttttattttaattttgttttaaagtagcttttagaccg 10120770  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 3708454 - 3708494
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  3708454 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 3708494  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 11868962 - 11868922
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  11868962 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 11868922  T

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Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 35360355 - 35360315
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaa 60  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  35360355 aaaaaataataaattcaaag-tttgtacaatattttgccaaa 35360315  T

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Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 38709708 - 38709765
Alignment:
Q  29 aaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataatttta 86  Q
    ||||||||||||||||||||||||||| |||| | ||||||| | |||||||| ||||    
T  38709708 aaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttta 38709765  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 2180132 - 2180178
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  2180132 cttaaagagctttattttaaatttattttatagtagtttttagaccg 2180178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 13549536 - 13549490
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||    
T  13549536 cttaaagagttttattttaactttgttttaaaataatttttagaccg 13549490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 35287271 - 35287226
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttaga 178  Q
    |||||||||  ||||||||||||||||||||||||||  |||||||    
T  35287271 ttcttaaaggcctttattttaactttgttttaaagtaacttttaga 35287226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 181
Target Start/End: Original strand, 25699 - 25869
Alignment:
Q  8 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact---nnnnnnnntaaag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||           |||||    
T  25699 cagacaccaccaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaactaaaaaaaaaaataaag 25798  T
Q  105 aaaccaaacagctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||||||||||          ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  25799 aaaccaaacagctttagccttt------ttcttaaagagttttattttaactttgttttaaagtagcttttagaccg 25869  T

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Target: scaffold0178 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 7364 - 7204
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact----nnnnnnnntaaagaaaccaaaca 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||             ||| ||||||||||    
T  7364 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaactaaaaaaaaaaaaaaaaaaaaccaaaca 7265  T
Q  115 gctttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||          |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7264 gctttagccttt------ttcttaaagagctttattttaactttgttttaaagtagcttttagaccg 7204  T

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Target: scaffold0198 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 15333 - 15174
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact-nnnnnnnntaaagaaaccaaacagct 117  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||| |||||||||         ||||||||||||||||||    
T  15333 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaactaaaaaaaaataaagaaaccaaacagct 15234  T
Q  118 ttagcnnnnnnnnncttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||            || ||||| ||||||||||||||||||||||||||||| ||||||||||    
T  15233 tta----attttttttttttaaaaagctttattttaactttgttttaaagtagcttttagaccg 15174  T

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Target: scaffold0024 (Bit Score: 56; Significance: 6e-23; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 90542 - 90463
Alignment:
Q  11 acaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||    
T  90542 acaccaccaaaaaaataataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 90463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 110487 - 110442
Alignment:
Q  136 ttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  110487 ttaaagaactttattttaactttgttttaaagtagcttttaaaccg 110442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 90410 - 90374
Alignment:
Q  145 tttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||| ||||||||||    
T  90410 tttattttaactttgttttaaagtagcttttagaccg 90374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 6375 - 6306
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttaga 88  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||    
T  6375 aaaaaataataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttaga 6306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 7656 - 7574
Alignment:
Q  10 gacaccaccaaaaaa-taataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||| | |||||||| |||||||||    
T  7656 gacaccaccaaaaaaataataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 132770 - 132817
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagacc 180  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  132770 ttcttaaagagctttattttaactttgttttaaagtagcttttagacc 132817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 132647 - 132730
Alignment:
Q  8 cagacaccaccaaaaa-ataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaact 91  Q
    ||||||| |||||||| |||||||||| |||||||  ||||||||||||||||| | ||||||| | |||||||| |||||||||    
T  132647 cagacacaaccaaaaagataataaattgaaagttta-tacaatattttgccaaacaacttttaaattaaaaataactttagaact 132730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1793 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 230 - 182
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||    
T  230 ttcttaaagagctttattttaactttgttttaaagtaacttttagaccg 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 137990 - 137944
Alignment:
Q  135 cttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||    
T  137990 cttaaagagctttattttaactttgttttaaagtaatttttagaccg 137944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 138101 - 138031
Alignment:
Q  19 aaaaaataataaattcaaagttttgtacaatattttgccaaatagcttttaattcaaaaataattttagaa 89  Q
    |||||| || ||||||||||| |||| ||||||||||| ||| | ||||||| | |||||||| |||||||    
T  138101 aaaaaaaaaaaaattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataactttagaa 138031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1822 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 354 - 402
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  354 ttcttaaagagttttattttaactttgttttaaagtaacttttagaccg 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 229193 - 229241
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||  |||||||||||||||||||||||| || ||||||||||    
T  229193 ttcttaaaggactttattttaactttgttttaaaggagcttttagaccg 229241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 99489 - 99537
Alignment:
Q  133 ttcttaaagagctttattttaactttgttttaaagtagattttagaccg 181  Q
    |||||||||| |||||||||||||||||||| || ||  ||||||||||    
T  99489 ttcttaaagacctttattttaactttgttttgaaataacttttagaccg 99537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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