View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3117R-Insertion-11 (Length: 396)
Name: NF3117R-Insertion-11
Description: NF3117R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3117R-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 301; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-170
Query Start/End: Original strand, 8 - 396
Target Start/End: Original strand, 21872708 - 21873092
Alignment:
| Q |
8 |
ataaggtagaaagaattttcctttctaaacaaagagcctccatcgttaacaaattcttgaatcaatgctgatataaatgatctcattctagaggcatgaa |
107 |
Q |
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| T |
21872708 |
ataaggtagaaagaattttcctttctaaacaaagagcctccatcattaacaaattcttgaatcaatgctgatataaatgatctcattctagaggcatgaa |
21872807 |
T |
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| Q |
108 |
cccaatgttgacttcttacaaagttgaccttaatcctgatttgtagtcttgkatttatctatgacacatagtcatcaaagtctaaagttttaagcttatt |
207 |
Q |
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| T |
21872808 |
cccatggttgacttcttacaaagttgaccataatcctgatttggagtcttgtatttatctatgacacatagtcatcaaggtctgaagttttaagcttatt |
21872907 |
T |
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| Q |
208 |
ttcgagaatgttgacttcaagtaagaagtttttacttggtgtccatggatttgacctggtcaaaggcgaaacttctctttgkattttgtattttctacac |
307 |
Q |
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| T |
21872908 |
ttcgagaatgttgacttcaattaagaagtttttacttggtgtccatggatttgacctggtcaaaggcaaaacttctctttgtattttgcattttctgcac |
21873007 |
T |
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| Q |
308 |
acttaaacacacacattagaaaattttaattgttcttaaacatgcttcatatatatgctttgkgattatcaaaacctaaccaatttagg |
396 |
Q |
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| T |
21873008 |
acttaa--acacacattaaaaaatcttaattgttcttaaacatgcttc--gtatatgctttgtgatcatcaaaacctaaccaatttagg |
21873092 |
T |
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