View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3117_high_4 (Length: 798)

Name: NF3117_high_4
Description: NF3117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3117_high_4
NF3117_high_4
[»] chr3 (23 HSPs)
chr3 (98-266)||(10371014-10371182)
chr3 (546-707)||(10667228-10667385)
chr3 (546-707)||(10520986-10521143)
chr3 (722-783)||(10521192-10521253)
chr3 (722-783)||(10667436-10667497)
chr3 (722-778)||(20365427-20365483)
chr3 (722-769)||(10448812-10448859)
chr3 (722-779)||(52421132-52421189)
chr3 (722-766)||(43079938-43079982)
chr3 (736-782)||(29614245-29614291)
chr3 (722-767)||(7292718-7292763)
chr3 (722-782)||(52021284-52021345)
chr3 (722-766)||(22809197-22809241)
chr3 (722-782)||(23816159-23816219)
chr3 (722-782)||(28741202-28741262)
chr3 (722-782)||(53218028-53218088)
chr3 (722-778)||(53787744-53787800)
chr3 (712-751)||(6504-6543)
chr3 (736-782)||(3645354-3645400)
chr3 (684-726)||(10449099-10449141)
chr3 (699-729)||(27769768-27769798)
chr3 (733-782)||(20894551-20894600)
chr3 (722-763)||(37243504-37243545)
[»] chr1 (25 HSPs)
chr1 (722-782)||(41196698-41196758)
chr1 (722-779)||(6337747-6337804)
chr1 (722-783)||(47413410-47413471)
chr1 (722-782)||(48819337-48819397)
chr1 (722-780)||(37712105-37712163)
chr1 (722-780)||(23369332-23369392)
chr1 (722-766)||(3069858-3069902)
chr1 (722-782)||(15515335-15515395)
chr1 (722-766)||(26988186-26988230)
chr1 (722-782)||(41576383-41576443)
chr1 (722-782)||(49971289-49971349)
chr1 (679-729)||(36259208-36259258)
chr1 (722-766)||(4068153-4068197)
chr1 (722-782)||(9572772-9572832)
chr1 (722-762)||(23544829-23544869)
chr1 (722-782)||(28690042-28690102)
chr1 (724-780)||(31378741-31378797)
chr1 (722-766)||(35590168-35590212)
chr1 (722-766)||(37329416-37329460)
chr1 (722-766)||(46501005-46501049)
chr1 (722-766)||(50919525-50919569)
chr1 (687-731)||(51409767-51409811)
chr1 (723-766)||(26435179-26435222)
chr1 (736-782)||(17628413-17628459)
chr1 (736-782)||(32497260-32497306)
[»] chr7 (21 HSPs)
chr7 (722-782)||(14691287-14691347)
chr7 (722-782)||(47654402-47654462)
chr7 (722-769)||(18855271-18855318)
chr7 (736-783)||(48949772-48949819)
chr7 (729-775)||(15819521-15819567)
chr7 (722-783)||(16012736-16012797)
chr7 (722-783)||(23119907-23119968)
chr7 (722-783)||(43391759-43391820)
chr7 (728-780)||(19913989-19914041)
chr7 (722-782)||(22032800-22032860)
chr7 (728-780)||(29378689-29378741)
chr7 (722-766)||(30181588-30181632)
chr7 (726-765)||(6406877-6406916)
chr7 (686-729)||(12473472-12473515)
chr7 (722-782)||(37779270-37779332)
chr7 (722-764)||(12473391-12473433)
chr7 (722-768)||(14536920-14536966)
chr7 (736-766)||(14675964-14675994)
chr7 (728-782)||(23356479-23356533)
chr7 (728-778)||(27881302-27881352)
chr7 (722-763)||(43818886-43818927)
[»] chr5 (25 HSPs)
chr5 (722-782)||(38461270-38461330)
chr5 (722-782)||(43319041-43319101)
chr5 (722-782)||(12987002-12987062)
chr5 (722-782)||(28625518-28625578)
chr5 (722-782)||(41419539-41419599)
chr5 (724-766)||(28357181-28357223)
chr5 (711-765)||(39154766-39154820)
chr5 (722-782)||(3977513-3977571)
chr5 (726-783)||(27805957-27806014)
chr5 (722-782)||(40452465-40452526)
chr5 (722-782)||(1576668-1576728)
chr5 (722-782)||(1608087-1608147)
chr5 (722-782)||(12467302-12467363)
chr5 (722-763)||(13060609-13060650)
chr5 (722-763)||(28357390-28357431)
chr5 (722-782)||(11912090-11912150)
chr5 (722-762)||(29659098-29659138)
chr5 (722-766)||(35536883-35536927)
chr5 (722-766)||(41534661-41534705)
chr5 (698-729)||(7364245-7364276)
chr5 (722-753)||(19840064-19840095)
chr5 (724-782)||(1868886-1868944)
chr5 (736-766)||(15122596-15122626)
chr5 (722-779)||(6144776-6144833)
chr5 (733-782)||(29418740-29418789)
[»] chr2 (14 HSPs)
chr2 (722-782)||(4026963-4027023)
chr2 (722-782)||(33321300-33321360)
chr2 (722-783)||(12267035-12267096)
chr2 (722-778)||(736002-736058)
chr2 (722-782)||(5903571-5903631)
chr2 (722-766)||(12223890-12223934)
chr2 (722-766)||(36501519-36501563)
chr2 (722-765)||(9140735-9140778)
chr2 (728-783)||(37409687-37409742)
chr2 (734-782)||(38471779-38471827)
chr2 (686-729)||(5516195-5516238)
chr2 (698-729)||(42064970-42065001)
chr2 (722-764)||(25836718-25836760)
chr2 (722-779)||(8342991-8343048)
[»] chr4 (26 HSPs)
chr4 (722-780)||(35124425-35124483)
chr4 (722-783)||(8601239-8601300)
chr4 (722-780)||(17222867-17222925)
chr4 (736-782)||(4603320-4603366)
chr4 (736-782)||(15184598-15184644)
chr4 (736-782)||(22273832-22273878)
chr4 (722-783)||(897008-897069)
chr4 (722-783)||(2405225-2405286)
chr4 (722-783)||(43415276-43415337)
chr4 (722-766)||(2494404-2494448)
chr4 (722-766)||(27368156-27368200)
chr4 (722-766)||(28663611-28663655)
chr4 (722-782)||(29877677-29877737)
chr4 (722-766)||(36255040-36255084)
chr4 (722-766)||(36740942-36740986)
chr4 (722-754)||(43699499-43699531)
chr4 (726-766)||(48591428-48591468)
chr4 (686-725)||(896951-896990)
chr4 (732-763)||(9319096-9319127)
chr4 (736-783)||(42617217-42617264)
chr4 (722-768)||(212950-212996)
chr4 (684-729)||(46650249-46650295)
chr4 (722-783)||(10046270-10046331)
chr4 (725-766)||(18630899-18630940)
chr4 (722-779)||(28074403-28074459)
chr4 (725-766)||(46704274-46704315)
[»] chr8 (13 HSPs)
chr8 (722-778)||(10298918-10298974)
chr8 (722-782)||(28280747-28280807)
chr8 (722-766)||(35168445-35168489)
chr8 (682-729)||(34102616-34102663)
chr8 (722-780)||(24350509-24350567)
chr8 (736-782)||(42363305-42363351)
chr8 (722-783)||(38895697-38895758)
chr8 (722-782)||(32975725-32975785)
chr8 (736-782)||(38338839-38338885)
chr8 (733-778)||(19327915-19327960)
chr8 (722-763)||(24866958-24866999)
chr8 (737-766)||(29713237-29713266)
chr8 (722-783)||(32924200-32924260)
[»] chr6 (21 HSPs)
chr6 (722-778)||(18078238-18078294)
chr6 (722-780)||(21610039-21610097)
chr6 (684-729)||(30534071-30534116)
chr6 (722-766)||(13429493-13429537)
chr6 (738-780)||(2027166-2027208)
chr6 (736-782)||(32165249-32165295)
chr6 (722-783)||(8014826-8014887)
chr6 (684-729)||(10054360-10054405)
chr6 (702-751)||(35071448-35071497)
chr6 (722-782)||(2255772-2255832)
chr6 (722-766)||(21891342-21891386)
chr6 (686-729)||(10054498-10054541)
chr6 (722-769)||(34509950-34509997)
chr6 (741-783)||(715898-715940)
chr6 (702-756)||(6805746-6805799)
chr6 (721-783)||(10874021-10874083)
chr6 (737-766)||(4808624-4808653)
chr6 (722-759)||(10730252-10730289)
chr6 (722-767)||(16589789-16589834)
chr6 (722-767)||(16605546-16605591)
chr6 (722-766)||(25430769-25430814)


Alignment Details
Target: chr3 (Bit Score: 145; Significance: 7e-76; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 98 - 266
Target Start/End: Complemental strand, 10371182 - 10371014
Alignment:
Q  98 caaacaaccatagatgttgatattgagtactaatctttctcatacgaatgagtttaggattagtaattaaggaactccatttcttgaatacaagcctagc 197  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||    
T  10371182 caaacaaccatagatgttgatattgagtaccaatctttctcatacgaatgagtttaggattagtaattaaggaactccattatttgaacacgagcctagc 10371083  T
Q  198 attctaggaacttttgagtggaaaccacccaaacacatttgaaaaatatcatcattagaaagaaataat 266  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10371082 attctaggaacttttgagtggaaaccacccaaacacatttgaagaatatcatcattagaaagaaataat 10371014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 546 - 707
Target Start/End: Original strand, 10667228 - 10667385
Alignment:
Q  546 gattctaaatggaaatttgatcattattttctcaacttccctcctttcaccaaatttcttaaaacatatagggaaagaaatttcagttttctgtatttta 645  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  10667228 gattctaaatggaaatttgatcattattttcttaacttccctcctttcaccaaatttcttgaaacatataggtgaagaaatttcagttttctgtatttta 10667327  T
Q  646 taagtttgtttatcaataaactcctacctagctagagtccgtttggaatagacttattttga 707  Q
    |||||||||||||||||||||||||||||||   || ||| |||||||||||||||||||||    
T  10667328 taagtttgtttatcaataaactcctacctag---ga-tccatttggaatagacttattttga 10667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 546 - 707
Target Start/End: Original strand, 10520986 - 10521143
Alignment:
Q  546 gattctaaatggaaatttgatcattattttctcaacttccctcctttcaccaaatttcttaaaacatatagggaaagaaatttcagttttctgtatttta 645  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  10520986 gattctaaatggaattttgatcattattttcttaacttccctcctttcaccaaatttcttgaaacatataggtgaagaaatttcagttttctgtatttta 10521085  T
Q  646 taagtttgtttatcaataaactcctacctagctagagtccgtttggaatagacttattttga 707  Q
    |||| ||||||||||||||||||||||||||     |||| |||||||||||||||||||||    
T  10521086 taaggttgtttatcaataaactcctacctagg----gtccatttggaatagacttattttga 10521143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 10521192 - 10521253
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  10521192 ataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtgaa 10521253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 10667436 - 10667497
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  10667436 ataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttagtgaa 10667497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 778
Target Start/End: Complemental strand, 20365483 - 20365427
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgtta 778  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||    
T  20365483 ataagcttgtcaaagtactttatgaaaaagcagtttatgaagatataatttttgtta 20365427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 722 - 769
Target Start/End: Original strand, 10448812 - 10448859
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataa 769  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  10448812 ataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataa 10448859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 722 - 779
Target Start/End: Complemental strand, 52421189 - 52421132
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttag 779  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||| || |||||||||    
T  52421189 ataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttag 52421132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 43079982 - 43079938
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  43079982 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagata 43079938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 736 - 782
Target Start/End: Original strand, 29614245 - 29614291
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  29614245 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtga 29614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 767
Target Start/End: Original strand, 7292718 - 7292763
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatat 767  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||    
T  7292718 ataagtttgtcaatatagtttatgaaaaaacagtttatgatgatat 7292763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 52021284 - 52021345
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaa-cagtttatgaagatataacttttgttagtga 782  Q
    ||||| ||||||| |||||||||||||||| ||| |||||||||||||| ||| ||||||||    
T  52021284 ataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttagtga 52021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 22809241 - 22809197
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||    
T  22809241 ataagcttgtcaaggtagtttatgaaaaaactgcttatgaagata 22809197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 23816219 - 23816159
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||  |||| ||||||||||||||||||| ||||||||||| |||||| || |||||    
T  23816219 ataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaactttggtcagtga 23816159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 28741262 - 28741202
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||| || ||||||||||||||||||| |||||||| || || ||| ||||||||    
T  28741262 ataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattttcgttagtga 28741202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 53218088 - 53218028
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| ||||||||||||||||||  || |||||||| || ||| ||||||||    
T  53218088 ataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaattttcgttagtga 53218028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 778
Target Start/End: Complemental strand, 53787800 - 53787744
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgtta 778  Q
    |||||||| | ||| ||||||| ||||||||||||||| ||||||||| ||||||||    
T  53787800 ataagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgtta 53787744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 712 - 751
Target Start/End: Original strand, 6504 - 6543
Alignment:
Q  712 atgcaaataaataagcttgtcaatgtagtttatgaaaaaa 751  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  6504 atgcaaataaataagcttgtcaaagtagtttatgataaaa 6543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 736 - 782
Target Start/End: Original strand, 3645354 - 3645400
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||||| ||||||||| || ||| ||||||||    
T  3645354 gtagtttatgaaaaaacagttcatgaagatacaattttcgttagtga 3645400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 726
Target Start/End: Complemental strand, 10449141 - 10449099
Alignment:
Q  684 ccgtttggaatagacttattttgagcttatgcaaataaataag 726  Q
    ||||||||| | | |||||||||||||||||||||||||||||    
T  10449141 ccgtttggattgggcttattttgagcttatgcaaataaataag 10449099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 729
Target Start/End: Complemental strand, 27769798 - 27769768
Alignment:
Q  699 ttattttgagcttatgcaaataaataagctt 729  Q
    |||||||||||||||||||||||||||||||    
T  27769798 ttattttgagcttatgcaaataaataagctt 27769768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 782
Target Start/End: Original strand, 20894551 - 20894600
Alignment:
Q  733 aatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||| ||||||||||||| ||||||||| || ||| ||||||||    
T  20894551 aatgtagtttttgaaaaaacagttcatgaagatacaattttcgttagtga 20894600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 763
Target Start/End: Original strand, 37243504 - 37243545
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaag 763  Q
    |||||||||| || |||||||||||||||| |||||||||||    
T  37243504 ataagcttgttaacgtagtttatgaaaaaatagtttatgaag 37243545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 41196758 - 41196698
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  41196758 ataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtga 41196698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 722 - 779
Target Start/End: Complemental strand, 6337804 - 6337747
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttag 779  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || |||||||||    
T  6337804 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttag 6337747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 47413410 - 47413471
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| || |||| |||||    
T  47413410 ataagcttgtcaatgtagtttatgaaataacaggttatgaagatataatttgtgttggtgaa 47413471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 48819337 - 48819397
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |  ||||||||||||    
T  48819337 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtga 48819397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 722 - 780
Target Start/End: Original strand, 37712105 - 37712163
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||| |||||| ||||||    
T  37712105 ataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgttagt 37712163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 722 - 780
Target Start/End: Original strand, 23369332 - 23369392
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaa--aacagtttatgaagatataacttttgttagt 780  Q
    ||||| ||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||    
T  23369332 ataagtttgtcaaagtagtttatgaaaaaaaacagtttatgaagatataactttcgttagt 23369392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 3069902 - 3069858
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  3069902 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagata 3069858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 15515395 - 15515335
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| |||||||||||||||| || ||||||||||| || ||| ||||||||    
T  15515395 ataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtga 15515335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 26988186 - 26988230
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  26988186 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagata 26988230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 41576443 - 41576383
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||| ||||| ||||||| ||| | ||||||||||||||||| ||||||||||||    
T  41576443 ataagcttgtaaatgttgtttatgtaaatatagtttatgaagatataatttttgttagtga 41576383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 49971289 - 49971349
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||| || ||| ||||||||    
T  49971289 ataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaattttcgttagtga 49971349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 679 - 729
Target Start/End: Original strand, 36259208 - 36259258
Alignment:
Q  679 agagtccgtttggaatagacttattttgagcttatgcaaataaataagctt 729  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||||||    
T  36259208 agagtctgtttggattaggtttattttgagcttatgcaaataaataagctt 36259258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 4068153 - 4068197
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||    
T  4068153 ataagcttgtcaaggtagtttatgaaaaaacaacttatgaagata 4068197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 9572832 - 9572772
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||| |||| || |||||||||||||||||| |||||||||||| |  ||||||||||||    
T  9572832 ataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaagtttttgttagtga 9572772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 762
Target Start/End: Original strand, 23544829 - 23544869
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaa 762  Q
    ||||||||||||| ||||||||||||||||||| |||||||    
T  23544829 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaa 23544869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 28690042 - 28690102
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||| ||||||| |||||||||||| |||||| ||||||||||| || |||| |||||||    
T  28690042 ataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaatttttattagtga 28690102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 780
Target Start/End: Complemental strand, 31378797 - 31378741
Alignment:
Q  724 aagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    ||||||||||| ||||||||||||||||  |||||| |||||| || ||||||||||    
T  31378797 aagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaatttttgttagt 31378741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 35590168 - 35590212
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| || |||||||||||||||| |||||||||||    
T  35590168 ataagcttgtcaaggttgtttatgaaaaaacagcttatgaagata 35590212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 37329460 - 37329416
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||    
T  37329460 ataaacttgtcaaggtagtttatgaaaaaacagcttatgaagata 37329416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 46501049 - 46501005
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    |||||||||||| ||||||||||||||||| || |||||||||||    
T  46501049 ataagcttgtcattgtagtttatgaaaaaataggttatgaagata 46501005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 50919525 - 50919569
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||||    
T  50919525 ataagtttgtcaatgtagtttataaaaaaacaggttatgaagata 50919569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 687 - 731
Target Start/End: Complemental strand, 51409811 - 51409767
Alignment:
Q  687 tttggaatagacttattttgagcttatgcaaataaataagcttgt 731  Q
    |||||| ||| ||||||||||||||||||||||||||||| ||||    
T  51409811 tttggattaggcttattttgagcttatgcaaataaataagtttgt 51409767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 766
Target Start/End: Complemental strand, 26435222 - 26435179
Alignment:
Q  723 taagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    |||| ||||||| ||||||||||||||||| |||||||||||||    
T  26435222 taagtttgtcaaagtagtttatgaaaaaactgtttatgaagata 26435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 736 - 782
Target Start/End: Complemental strand, 17628459 - 17628413
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||| ||||||||||||| || ||| ||||||||    
T  17628459 gtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtga 17628413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 736 - 782
Target Start/End: Complemental strand, 32497306 - 32497260
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||||||||||||||||||| |||| || ||| ||||||||    
T  32497306 gtagtttatgaaaaaacagtttatgaggatacaattttcgttagtga 32497260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 14691347 - 14691287
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||    
T  14691347 ataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtga 14691287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 47654462 - 47654402
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||| ||||||||||||||||||||||||||||||| || || ||| ||||||||    
T  47654462 ataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtga 47654402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 722 - 769
Target Start/End: Complemental strand, 18855318 - 18855271
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataa 769  Q
    |||||||||||||||||||||||| ||||| || ||||||||||||||    
T  18855318 ataagcttgtcaatgtagtttatggaaaaatagattatgaagatataa 18855271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 736 - 783
Target Start/End: Original strand, 48949772 - 48949819
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||    
T  48949772 gtagtttatgaaaaaacagtttatgaagatataatattcgttagtgaa 48949819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 729 - 775
Target Start/End: Complemental strand, 15819567 - 15819521
Alignment:
Q  729 tgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttg 775  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  15819567 tgtcaaggtagtttatgaaaaaactgtttacgaagatataacttttg 15819521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 16012736 - 16012797
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||||| ||||||||||||||||| | || |||||||| || ||| |||||||||    
T  16012736 ataagcttgtcaaagtagtttatgaaaaaactgcttctgaagatacaattttcgttagtgaa 16012797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Complemental strand, 23119968 - 23119907
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||| |||||||||||||||| |||| |||||||| |||||||| || ||||||| |||||    
T  23119968 ataagtttgtcaatgtagtttaagaaataacagtttgtgaagatacaatttttgttcgtgaa 23119907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 43391759 - 43391820
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||| |||| || |||||||||||||||| | ||||||||||||||| ||||||| |||||    
T  43391759 ataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtttgtgaa 43391820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 728 - 780
Target Start/End: Original strand, 19913989 - 19914041
Alignment:
Q  728 ttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    |||| |||||||||||||||||||| ||||||||||| |||| ||| ||||||    
T  19913989 ttgttaatgtagtttatgaaaaaacggtttatgaagagataattttcgttagt 19914041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 22032800 - 22032860
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||| ||| ||||||||||||||||||||| ||||||||| || || ||| ||||||||    
T  22032800 ataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtga 22032860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 728 - 780
Target Start/End: Original strand, 29378689 - 29378741
Alignment:
Q  728 ttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    ||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||    
T  29378689 ttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagt 29378741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 30181588 - 30181632
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||    
T  30181588 ataagcttgtcaaggtagtttatcaaaaaacagcttatgaagata 30181632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 765
Target Start/End: Complemental strand, 6406916 - 6406877
Alignment:
Q  726 gcttgtcaatgtagtttatgaaaaaacagtttatgaagat 765  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  6406916 gcttgtcaaggtagtttatgaaaaaacagcttatgaagat 6406877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 729
Target Start/End: Complemental strand, 12473515 - 12473472
Alignment:
Q  686 gtttggaatagacttattttgagcttatgcaaataaataagctt 729  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||    
T  12473515 gtttggattaggcttattttgagcttattcaaataaataagctt 12473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 37779332 - 37779270
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaa--aaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||| ||| |||||| ||||||||    
T  37779332 ataagcttgtcaaggtagtttatgaaaaaaaacagcttatgaaaatacaactttcgttagtga 37779270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 722 - 764
Target Start/End: Original strand, 12473391 - 12473433
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaaga 764  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||    
T  12473391 ataagtttgtaaatgtagtttatgaaaaaacagtttataaaga 12473433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 722 - 768
Target Start/End: Original strand, 14536920 - 14536966
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatata 768  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||||    
T  14536920 ataagattgtcaagatagtttatgaaaaaacactttatgaagatata 14536966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 736 - 766
Target Start/End: Complemental strand, 14675994 - 14675964
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagata 766  Q
    |||||||||||||||||||||||||||||||    
T  14675994 gtagtttatgaaaaaacagtttatgaagata 14675964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 728 - 782
Target Start/End: Complemental strand, 23356533 - 23356479
Alignment:
Q  728 ttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||| ||| ||||||||||||||||||||||| |||  | ||||||||||||    
T  23356533 ttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtga 23356479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 728 - 778
Target Start/End: Original strand, 27881302 - 27881352
Alignment:
Q  728 ttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgtta 778  Q
    ||||| |||||||||||||||||||  |||||||| ||| |||||||||||    
T  27881302 ttgtcgatgtagtttatgaaaaaactatttatgaaaatacaacttttgtta 27881352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 763
Target Start/End: Complemental strand, 43818927 - 43818886
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaag 763  Q
    |||||||||| |||||  ||||||||||||||||||||||||    
T  43818927 ataagcttgttaatgttatttatgaaaaaacagtttatgaag 43818886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 3e-16; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 38461330 - 38461270
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  38461330 ataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtga 38461270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 43319041 - 43319101
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||    
T  43319041 ataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattttcgttagtga 43319101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 12987062 - 12987002
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||  | ||||||||||||    
T  12987062 ataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgttagtga 12987002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 28625518 - 28625578
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||||    
T  28625518 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtga 28625578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 41419539 - 41419599
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||||    
T  41419539 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtga 41419599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 28357181 - 28357223
Alignment:
Q  724 aagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  28357181 aagcttgtcaatgtagtttatgaaaaaacaggttatgaagata 28357223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 711 - 765
Target Start/End: Complemental strand, 39154820 - 39154766
Alignment:
Q  711 tatgcaaataaataagcttgtcaatgtagtttatgaaaaaacagtttatgaagat 765  Q
    |||| ||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  39154820 tatgaaaataaataagcttgtcaaggtagtttatgaaaaaactgattatgaagat 39154766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 3977513 - 3977571
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| |||||||||||||||||||||||||   || ||||||||||||||||    
T  3977513 ataagcttgtcaaggtagtttatgaaaaaacagtttatg--tatctaacttttgttagtga 3977571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 783
Target Start/End: Original strand, 27805957 - 27806014
Alignment:
Q  726 gcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||||||||||||||||||||  |||| |||||| || |||||||||||||    
T  27805957 gcttgtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgttagtgaa 27806014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 40452526 - 40452465
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataactttt-gttagtga 782  Q
    ||||||||||||| |||||||||||| |||||| |||||||||||||| |||| ||||||||    
T  40452526 ataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtga 40452465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 1576668 - 1576728
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||||||||||||||||| |||||||  || |||||||| || ||||||||||||    
T  1576668 ataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtga 1576728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 1608147 - 1608087
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||||||||||||||||| |||||||  || |||||||| || ||||||||||||    
T  1608147 ataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtga 1608087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 12467302 - 12467363
Alignment:
Q  722 ataagcttgtcaatgtagtttatg-aaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||| | || ||||||||||||    
T  12467302 ataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaatttttgttagtga 12467363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 763
Target Start/End: Complemental strand, 13060650 - 13060609
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaag 763  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  13060650 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaag 13060609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 763
Target Start/End: Original strand, 28357390 - 28357431
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaag 763  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  28357390 ataagtttgttaatgtagtttatgaaaaaacagtttatgaag 28357431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 11912150 - 11912090
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||| |||||||| ||||||| |||||||| || ||||||||||| || ||||||||||||    
T  11912150 ataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtga 11912090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 762
Target Start/End: Original strand, 29659098 - 29659138
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaa 762  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  29659098 ataagcttgttaatgtagtttaagaaaaaacagtttatgaa 29659138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 35536883 - 35536927
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    |||||||||||||  |||||||||||||||||| |||||||||||    
T  35536883 ataagcttgtcaagatagtttatgaaaaaacagcttatgaagata 35536927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 41534661 - 41534705
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| |||||||| |||||||||| |||||||||||    
T  41534661 ataagcttgtcaaggtagtttacgaaaaaacagcttatgaagata 41534705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 729
Target Start/End: Original strand, 7364245 - 7364276
Alignment:
Q  698 cttattttgagcttatgcaaataaataagctt 729  Q
    ||||||||||||||||||||||||||||||||    
T  7364245 cttattttgagcttatgcaaataaataagctt 7364276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 753
Target Start/End: Original strand, 19840064 - 19840095
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaaca 753  Q
    ||||||||||||||||||||||||||||||||    
T  19840064 ataagcttgtcaatgtagtttatgaaaaaaca 19840095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 724 - 782
Target Start/End: Original strand, 1868886 - 1868944
Alignment:
Q  724 aagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||| ||||||||||||||| ||  ||||||||||| || ||| ||||||||    
T  1868886 aagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtga 1868944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 736 - 766
Target Start/End: Original strand, 15122596 - 15122626
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagata 766  Q
    |||||||||||||||||||||||||||||||    
T  15122596 gtagtttatgaaaaaacagtttatgaagata 15122626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 779
Target Start/End: Original strand, 6144776 - 6144833
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttag 779  Q
    ||||||||||||| ||| |||||||||||| || ||||||| ||| || |||||||||    
T  6144776 ataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttag 6144833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 782
Target Start/End: Complemental strand, 29418789 - 29418740
Alignment:
Q  733 aatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||||| ||||||||| || || ||| ||||||||    
T  29418789 aatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtga 29418740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 3e-16; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 4026963 - 4027023
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  4026963 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtga 4027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 722 - 782
Target Start/End: Complemental strand, 33321360 - 33321300
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  33321360 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtga 33321300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 12267035 - 12267096
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||| |||| ||||||||    
T  12267035 ataagcttgtcgatgtagtttatgaaaaaataggttatgaagatataatttttattagtgaa 12267096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 778
Target Start/End: Original strand, 736002 - 736058
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgtta 778  Q
    |||||||||| || || ||||||||||||| ||||||||||||||||| ||||||||    
T  736002 ataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataatttttgtta 736058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 5903571 - 5903631
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| |||||| |||||||||||  ||||||||||| || ||||||||||||    
T  5903571 ataagcttgtcaaagtagttaatgaaaaaacatcttatgaagatacaatttttgttagtga 5903631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 12223890 - 12223934
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  12223890 ataagcctgtcaaggtagtttatgaaaaaacagtttatgaagata 12223934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 36501563 - 36501519
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  36501563 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagata 36501519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 722 - 765
Target Start/End: Complemental strand, 9140778 - 9140735
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagat 765  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  9140778 ataaacttgtcaatgtagtttatgtaaaaacagtttatgaagat 9140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 728 - 783
Target Start/End: Original strand, 37409687 - 37409742
Alignment:
Q  728 ttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    |||||||||||||||||||||||||| |||||||| ||| || |||||||| ||||    
T  37409687 ttgtcaatgtagtttatgaaaaaacaatttatgaaaatacaatttttgttattgaa 37409742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 734 - 782
Target Start/End: Complemental strand, 38471827 - 38471779
Alignment:
Q  734 atgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||||||||||||||||||||||| || || ||| ||||||||    
T  38471827 atgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtga 38471779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 729
Target Start/End: Complemental strand, 5516238 - 5516195
Alignment:
Q  686 gtttggaatagacttattttgagcttatgcaaataaataagctt 729  Q
    ||||||| |||  |||||||||||||||||||||||||||||||    
T  5516238 gtttggattaggtttattttgagcttatgcaaataaataagctt 5516195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 729
Target Start/End: Complemental strand, 42065001 - 42064970
Alignment:
Q  698 cttattttgagcttatgcaaataaataagctt 729  Q
    ||||||||||||||||||||||||||||||||    
T  42065001 cttattttgagcttatgcaaataaataagctt 42064970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 722 - 764
Target Start/End: Complemental strand, 25836760 - 25836718
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaaga 764  Q
    ||||||||||||| ||||||||||||||||| | |||||||||    
T  25836760 ataagcttgtcaaggtagtttatgaaaaaacggcttatgaaga 25836718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 779
Target Start/End: Complemental strand, 8343048 - 8342991
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttag 779  Q
    ||||||||||||||||| |||||| ||||| | |||||||||||| || ||| |||||    
T  8343048 ataagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattttcgttag 8342991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 722 - 780
Target Start/End: Original strand, 35124425 - 35124483
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||    
T  35124425 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaaattttgttagt 35124483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 8601239 - 8601300
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    |||||| |||||||||||||||||||||||| | ||||||||||| || |||||||||||||    
T  8601239 ataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgttagtgaa 8601300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 722 - 780
Target Start/End: Original strand, 17222867 - 17222925
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||    
T  17222867 ataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagt 17222925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 736 - 782
Target Start/End: Complemental strand, 4603366 - 4603320
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  4603366 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtga 4603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 736 - 782
Target Start/End: Original strand, 15184598 - 15184644
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  15184598 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtga 15184644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 736 - 782
Target Start/End: Original strand, 22273832 - 22273878
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  22273832 gtagtttatgaaaaaacagcttatgaagatacaatttttgttagtga 22273878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 897008 - 897069
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    |||||||||||||||||||||||||||||||| |||| | |||||  | ||| |||||||||    
T  897008 ataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaa 897069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 2405225 - 2405286
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    |||||||||||||||||||||||||||||| || ||||| ||||| || |||| ||| ||||    
T  2405225 ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaattttttttaatgaa 2405286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Complemental strand, 43415337 - 43415276
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||| |||| ||||||||||| ||||||||| ||||| |||||||||  ||||||||||||    
T  43415337 ataaggttgttaatgtagtttacgaaaaaacaatttatcaagatataatatttgttagtgaa 43415276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 2494448 - 2494404
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    |||||||||| || |||||||||||||||| ||||||||||||||    
T  2494448 ataagcttgtaaaggtagtttatgaaaaaatagtttatgaagata 2494404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 27368200 - 27368156
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||    
T  27368200 ataagtttgtcaatgtagcttatgaaaaaacagtttataaagata 27368156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 28663611 - 28663655
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||    
T  28663611 ataagcttgtcaaggtagtttatgaaaaaacagattctgaagata 28663655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 29877677 - 29877737
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||  || ||||||||||||||| ||| ||||||||||| || ||||||||||||    
T  29877677 ataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaatttttgttagtga 29877737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 36255084 - 36255040
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||    
T  36255084 ataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagata 36255040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 36740942 - 36740986
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||    
T  36740942 ataagcttgtcaaagtagtttatgaaaatacagttcatgaagata 36740986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 754
Target Start/End: Complemental strand, 43699531 - 43699499
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacag 754  Q
    |||||||||||||||||||||||||||||||||    
T  43699531 ataagcttgtcaatgtagtttatgaaaaaacag 43699499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 726 - 766
Target Start/End: Complemental strand, 48591468 - 48591428
Alignment:
Q  726 gcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  48591468 gcttgtcaaggtagtttatgaaaaaacagcttatgaagata 48591428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 725
Target Start/End: Original strand, 896951 - 896990
Alignment:
Q  686 gtttggaatagacttattttgagcttatgcaaataaataa 725  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  896951 gtttggattagacctattttgagcttatgcaaataaataa 896990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 763
Target Start/End: Original strand, 9319096 - 9319127
Alignment:
Q  732 caatgtagtttatgaaaaaacagtttatgaag 763  Q
    ||||||||||||||||||||||||||||||||    
T  9319096 caatgtagtttatgaaaaaacagtttatgaag 9319127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 783
Target Start/End: Complemental strand, 42617264 - 42617217
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    |||||||||||||||| ||||||||||||||| | ||| |||||||||    
T  42617264 gtagtttatgaaaaaatagtttatgaagatatgattttcgttagtgaa 42617217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 722 - 768
Target Start/End: Complemental strand, 212996 - 212950
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatata 768  Q
    |||||||||| || ||||||||||||||||||  |||||||||||||    
T  212996 ataagcttgttaaggtagtttatgaaaaaacaacttatgaagatata 212950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 729
Target Start/End: Original strand, 46650249 - 46650295
Alignment:
Q  684 ccgtttggaatagacttattttgagc-ttatgcaaataaataagctt 729  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||    
T  46650249 ccgtttggattaaacttattttgagctttatgcaaataaataagctt 46650295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 10046270 - 10046331
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    |||| |||||||||||||||||| ||||||||| ||||||| ||| || ||| |||| ||||    
T  10046270 ataaacttgtcaatgtagtttataaaaaaacaggttatgaaaatacaattttcgttattgaa 10046331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 725 - 766
Target Start/End: Complemental strand, 18630940 - 18630899
Alignment:
Q  725 agcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  18630940 agcttgttaaggtagtttatgaaaaaacagcttatgaagata 18630899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 779
Target Start/End: Original strand, 28074403 - 28074459
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttag 779  Q
    ||||||||||||| |||||||||||||||| || ||||||||||| || ||| |||||    
T  28074403 ataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttag 28074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 725 - 766
Target Start/End: Complemental strand, 46704315 - 46704274
Alignment:
Q  725 agcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||| || ||||||||||||||||||| |||||||||||    
T  46704315 agcttgttaaggtagtttatgaaaaaacagcttatgaagata 46704274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 778
Target Start/End: Complemental strand, 10298974 - 10298918
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgtta 778  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||    
T  10298974 ataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgtta 10298918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 28280747 - 28280807
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||| |||| |||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  28280747 ataagtttgttaatgtagtttatgaaaaaactgtttatgaaggtataccttttgttagtga 28280807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 35168489 - 35168445
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  35168489 ataagcttgtcaaggtagtttatgaaaaaacagtttatgaagata 35168445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 682 - 729
Target Start/End: Original strand, 34102616 - 34102663
Alignment:
Q  682 gtccgtttggaatagacttattttgagcttatgcaaataaataagctt 729  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  34102616 gtccgtttggattaggcttattctgagcttatgcaaataaataagctt 34102663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 722 - 780
Target Start/End: Complemental strand, 24350567 - 24350509
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    ||||||||||||| ||| |||||||||||| || |||||||||||||| ||| ||||||    
T  24350567 ataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagt 24350509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 736 - 782
Target Start/End: Complemental strand, 42363351 - 42363305
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||| ||||||||||||| || ||||||||||||    
T  42363351 gtagtttatgaaaaaaccgtttatgaagatacaatttttgttagtga 42363305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 38895697 - 38895758
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    |||||||||| || |||||||||||||||| | |||||||||||| ||  ||||||||||||    
T  38895697 ataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaa 38895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 32975725 - 32975785
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||| |||||||||||||| |||  ||||||||||| || ||||||| ||||    
T  32975725 ataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtga 32975785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 736 - 782
Target Start/End: Complemental strand, 38338885 - 38338839
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||||||||| ||||||||||||||| | ||| ||||||||    
T  38338885 gtagtttatgaaaaaatagtttatgaagatatgattttcgttagtga 38338839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 778
Target Start/End: Original strand, 19327915 - 19327960
Alignment:
Q  733 aatgtagtttatgaaaaaacagtttatgaagatataacttttgtta 778  Q
    ||||||||||||| ||||||||||||| |||||| || ||||||||    
T  19327915 aatgtagtttatggaaaaacagtttataaagatacaatttttgtta 19327960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 763
Target Start/End: Complemental strand, 24866999 - 24866958
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaag 763  Q
    ||||| |||| |||||||||||||||||||||| ||||||||    
T  24866999 ataagattgttaatgtagtttatgaaaaaacagcttatgaag 24866958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 766
Target Start/End: Original strand, 29713237 - 29713266
Alignment:
Q  737 tagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||||||||||||||||||||    
T  29713237 tagtttatgaaaaaacagtttatgaagata 29713266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 783
Target Start/End: Complemental strand, 32924260 - 32924200
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||  ||||||||||||||||||||  ||||||||||| || |||| ||||||||    
T  32924260 ataagcttgtttatgtagtttatgaaaaaacaacttatgaagata-aaattttcttagtgaa 32924200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 722 - 778
Target Start/End: Complemental strand, 18078294 - 18078238
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgtta 778  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  18078294 ataagtttgtcaatgtattttatgaaaaaacagtttataaagatataatttttgtta 18078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 722 - 780
Target Start/End: Complemental strand, 21610097 - 21610039
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||||    
T  21610097 ataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataattttcgttagt 21610039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 729
Target Start/End: Complemental strand, 30534116 - 30534071
Alignment:
Q  684 ccgtttggaatagacttattttgagcttatgcaaataaataagctt 729  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  30534116 ccgtttggattaggcttattttgagcttatgcaaataaataagctt 30534071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 722 - 766
Target Start/End: Original strand, 13429493 - 13429537
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||    
T  13429493 ataagcttgtcaaagtagtttatgaaaaaacagtttatgaggata 13429537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 738 - 780
Target Start/End: Complemental strand, 2027208 - 2027166
Alignment:
Q  738 agtttatgaaaaaacagtttatgaagatataacttttgttagt 780  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  2027208 agtttatgaaaaaacagcttatgaagatacaacttttgttagt 2027166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 736 - 782
Target Start/End: Complemental strand, 32165295 - 32165249
Alignment:
Q  736 gtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    ||||||||||||||||||||||||||||||| || ||| ||||||||    
T  32165295 gtagtttatgaaaaaacagtttatgaagatacaattttcgttagtga 32165249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 722 - 783
Target Start/End: Original strand, 8014826 - 8014887
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||||| ||||||||||||||||| |  |||||||||| || ||| |||||||||    
T  8014826 ataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattttggttagtgaa 8014887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 729
Target Start/End: Original strand, 10054360 - 10054405
Alignment:
Q  684 ccgtttggaatagacttattttgagcttatgcaaataaataagctt 729  Q
    |||||||||  || ||||||||||||||||||||||||||||||||    
T  10054360 ccgtttggatcaggcttattttgagcttatgcaaataaataagctt 10054405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 702 - 751
Target Start/End: Complemental strand, 35071497 - 35071448
Alignment:
Q  702 ttttgagcttatgcaaataaataagcttgtcaatgtagtttatgaaaaaa 751  Q
    |||| |||||||||||||||  ||||||||||| ||||||||||||||||    
T  35071497 tttttagcttatgcaaataatcaagcttgtcaaggtagtttatgaaaaaa 35071448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 782
Target Start/End: Original strand, 2255772 - 2255832
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtga 782  Q
    |||||||||| || ||| ||||||||||||||| ||||||||||| || ||||| ||||||    
T  2255772 ataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggtagtga 2255832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 21891386 - 21891342
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||    
T  21891386 ataagcttgtcaatgtagtttatgaaataacaacttatgaagata 21891342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 729
Target Start/End: Complemental strand, 10054541 - 10054498
Alignment:
Q  686 gtttggaatagacttattttgagcttatgcaaataaataagctt 729  Q
    ||||||||||| | ||||||||||||||||||||||||| ||||    
T  10054541 gtttggaataggcctattttgagcttatgcaaataaataggctt 10054498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 769
Target Start/End: Original strand, 34509950 - 34509997
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataa 769  Q
    ||||| ||||||||| ||||||||| |||| |||||||||||||||||    
T  34509950 ataagtttgtcaatggagtttatgataaaagagtttatgaagatataa 34509997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 741 - 783
Target Start/End: Complemental strand, 715940 - 715898
Alignment:
Q  741 ttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||| |||||||||||||| || |||||||||||||    
T  715940 ttatgaaaaaatagtttatgaagatacaatttttgttagtgaa 715898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 702 - 756
Target Start/End: Original strand, 6805746 - 6805799
Alignment:
Q  702 ttttgagcttatgcaaataaataagcttgtcaatgtagtttatgaaaaaacagtt 756  Q
    |||| |||||||||||||||  || |||||||| |||||||||||||||||||||    
T  6805746 tttttagcttatgcaaataatcaa-cttgtcaaggtagtttatgaaaaaacagtt 6805799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 721 - 783
Target Start/End: Original strand, 10874021 - 10874083
Alignment:
Q  721 aataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatataacttttgttagtgaa 783  Q
    ||||||||||| || ||||||||||| ||||||| ||||||||||| || ||| ||| |||||    
T  10874021 aataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaattttagttggtgaa 10874083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 737 - 766
Target Start/End: Original strand, 4808624 - 4808653
Alignment:
Q  737 tagtttatgaaaaaacagtttatgaagata 766  Q
    ||||||||||||||||||||||||||||||    
T  4808624 tagtttatgaaaaaacagtttatgaagata 4808653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 759
Target Start/End: Complemental strand, 10730289 - 10730252
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttat 759  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  10730289 ataaacttgttaatgtagtttatgaaaaaacagtttat 10730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 767
Target Start/End: Original strand, 16589789 - 16589834
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatat 767  Q
    ||||| ||||||| | |||||||||||||||| |||||||||||||    
T  16589789 ataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatat 16589834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 767
Target Start/End: Complemental strand, 16605591 - 16605546
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaaaaaacagtttatgaagatat 767  Q
    ||||| ||||||| | |||||||||||||||| |||||||||||||    
T  16605591 ataagtttgtcaaaggagtttatgaaaaaacaatttatgaagatat 16605546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 766
Target Start/End: Complemental strand, 25430814 - 25430769
Alignment:
Q  722 ataagcttgtcaatgtagtttatgaa-aaaacagtttatgaagata 766  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||||    
T  25430814 ataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagata 25430769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University