View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3117_high_46 (Length: 274)
Name: NF3117_high_46
Description: NF3117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3117_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 32550366 - 32550621
Alignment:
| Q |
1 |
attttctaaaaattggaacatttttatatccgtagacgaaattgacctcacaaaactcacacacacaaagttcccagtttgaatatcagcattgtcggaa |
100 |
Q |
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| T |
32550366 |
attttctaaaaattggaacatttttatatccgtagacgaaattgacctcacaaaactcacacacacaaagttcccagtttgaatatcagcattgtcggaa |
32550465 |
T |
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| Q |
101 |
gnnnnnnnnn-ttgtaatatattgtgatagtcaaaaactatgaaccgaaacaagtgatttgatgattgttgaagtgcagaaaagcacaaacctcgatacg |
199 |
Q |
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| T |
32550466 |
gaaaaaaaaaattgtaatatattgtgatagtcaaaaactatgaaccgaaacaagtgatttggtgattgttgaagtgcagaaaagcacaaacctcgatacg |
32550565 |
T |
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| Q |
200 |
agtaatggtgaaaatggcatgagcagtgttcttataactgggaagatgagaggctc |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32550566 |
agtaatggtgaaaatggcatgagcagtgttcttataactgggaagatgagaggctc |
32550621 |
T |
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