View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3117_high_53 (Length: 251)

Name: NF3117_high_53
Description: NF3117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3117_high_53
NF3117_high_53
[»] chr3 (48 HSPs)
chr3 (1-246)||(20493411-20493654)
chr3 (27-215)||(28529250-28529437)
chr3 (26-210)||(52123955-52124140)
chr3 (27-214)||(41451890-41452078)
chr3 (26-214)||(24734701-24734890)
chr3 (27-210)||(37776702-37776886)
chr3 (27-208)||(46450064-46450244)
chr3 (27-210)||(5452061-5452243)
chr3 (68-208)||(18427153-18427292)
chr3 (30-208)||(20791296-20791475)
chr3 (27-184)||(55452041-55452196)
chr3 (41-161)||(26310495-26310615)
chr3 (27-163)||(29755497-29755633)
chr3 (26-184)||(46160945-46161101)
chr3 (40-182)||(10948588-10948730)
chr3 (47-171)||(22604577-22604701)
chr3 (37-192)||(50156678-50156831)
chr3 (77-167)||(19345043-19345133)
chr3 (39-192)||(8824997-8825150)
chr3 (27-208)||(27243042-27243225)
chr3 (25-163)||(48351431-48351569)
chr3 (30-208)||(14236019-14236198)
chr3 (60-182)||(138793-138915)
chr3 (30-115)||(29389108-29389193)
chr3 (77-192)||(2419482-2419597)
chr3 (94-192)||(29588751-29588849)
chr3 (31-155)||(41387564-41387686)
chr3 (27-83)||(18722583-18722639)
chr3 (31-179)||(40715893-40716041)
chr3 (27-99)||(54140887-54140959)
chr3 (27-174)||(2008992-2009138)
chr3 (26-113)||(37600227-37600314)
chr3 (26-208)||(46575944-46576126)
chr3 (56-138)||(54140965-54141047)
chr3 (111-184)||(24429051-24429124)
chr3 (30-138)||(30624633-30624739)
chr3 (36-113)||(46237143-46237220)
chr3 (28-171)||(15790409-15790551)
chr3 (39-102)||(22856336-22856399)
chr3 (40-159)||(41707490-41707609)
chr3 (26-60)||(20955719-20955753)
chr3 (94-216)||(38414711-38414832)
chr3 (78-171)||(44844029-44844123)
chr3 (27-84)||(37600124-37600181)
chr3 (27-76)||(52951494-52951543)
chr3 (99-163)||(742025-742089)
chr3 (99-163)||(752461-752525)
chr3 (32-167)||(50661564-50661700)
[»] chr8 (39 HSPs)
chr8 (26-210)||(16983390-16983575)
chr8 (31-202)||(9952765-9952936)
chr8 (26-192)||(1977191-1977357)
chr8 (31-163)||(32072098-32072230)
chr8 (27-210)||(35151728-35151912)
chr8 (30-169)||(8903852-8903991)
chr8 (30-167)||(28413912-28414049)
chr8 (28-207)||(5979878-5980057)
chr8 (26-170)||(8914767-8914911)
chr8 (37-171)||(24055964-24056098)
chr8 (26-210)||(34861191-34861369)
chr8 (53-210)||(17499234-17499390)
chr8 (30-163)||(23685131-23685264)
chr8 (26-171)||(43506534-43506676)
chr8 (34-214)||(11962677-11962857)
chr8 (30-192)||(4674911-4675068)
chr8 (25-165)||(36629654-36629792)
chr8 (65-163)||(35797430-35797528)
chr8 (29-86)||(31691635-31691692)
chr8 (27-184)||(41727427-41727584)
chr8 (96-167)||(35819198-35819269)
chr8 (78-164)||(17741573-17741659)
chr8 (79-169)||(36804880-36804970)
chr8 (26-63)||(38091500-38091537)
chr8 (100-171)||(7493381-7493453)
chr8 (27-99)||(13856506-13856578)
chr8 (26-174)||(31301111-31301258)
chr8 (56-171)||(35689506-35689622)
chr8 (30-168)||(45246432-45246572)
chr8 (32-83)||(1205829-1205880)
chr8 (141-172)||(3099644-3099675)
chr8 (27-62)||(9452532-9452567)
chr8 (49-99)||(1205941-1205991)
chr8 (121-214)||(6098772-6098866)
chr8 (78-148)||(13214543-13214613)
chr8 (94-160)||(34952507-34952573)
chr8 (26-217)||(13407315-13407508)
chr8 (33-156)||(17716856-17716977)
chr8 (27-63)||(34952458-34952494)
[»] chr6 (29 HSPs)
chr6 (25-209)||(34905331-34905516)
chr6 (30-202)||(10133165-10133338)
chr6 (40-210)||(5106308-5106479)
chr6 (26-177)||(32122791-32122942)
chr6 (27-184)||(445815-445972)
chr6 (30-192)||(21987292-21987454)
chr6 (77-170)||(16852013-16852106)
chr6 (27-202)||(12753767-12753943)
chr6 (38-184)||(31116150-31116296)
chr6 (27-184)||(2675892-2676049)
chr6 (31-183)||(32598975-32599124)
chr6 (30-184)||(13001692-13001846)
chr6 (26-210)||(19090213-19090399)
chr6 (26-192)||(8441867-8442021)
chr6 (26-192)||(8450671-8450825)
chr6 (87-210)||(12780760-12780882)
chr6 (59-210)||(17144672-17144822)
chr6 (27-156)||(31443956-31444085)
chr6 (33-138)||(35128795-35128900)
chr6 (78-201)||(32112725-32112849)
chr6 (53-116)||(12327299-12327362)
chr6 (30-210)||(1392630-1392808)
chr6 (45-126)||(2931576-2931657)
chr6 (54-139)||(4595766-4595851)
chr6 (27-84)||(19090209-19090266)
chr6 (25-113)||(6531395-6531483)
chr6 (26-138)||(10060855-10060967)
chr6 (147-216)||(17226644-17226714)
chr6 (78-163)||(12784986-12785071)
[»] chr7 (55 HSPs)
chr7 (27-210)||(22189936-22190120)
chr7 (27-192)||(6442162-6442327)
chr7 (31-210)||(11824072-11824250)
chr7 (26-214)||(39254079-39254268)
chr7 (27-168)||(33008101-33008242)
chr7 (25-216)||(27949268-27949460)
chr7 (26-170)||(31502504-31502648)
chr7 (30-210)||(46517293-46517472)
chr7 (26-210)||(27888278-27888463)
chr7 (40-210)||(7775010-7775180)
chr7 (27-184)||(12263462-12263619)
chr7 (29-208)||(48374440-48374618)
chr7 (30-210)||(14795131-14795310)
chr7 (30-210)||(15242123-15242302)
chr7 (30-163)||(36845569-36845701)
chr7 (26-171)||(32205075-32205217)
chr7 (71-202)||(11692220-11692352)
chr7 (31-165)||(25092706-25092840)
chr7 (30-171)||(19422873-19423014)
chr7 (25-207)||(32212872-32213054)
chr7 (31-210)||(13919781-13919962)
chr7 (27-209)||(6580002-6580188)
chr7 (30-202)||(25428485-25428659)
chr7 (30-171)||(32178843-32178981)
chr7 (94-163)||(25686882-25686951)
chr7 (27-138)||(12270985-12271093)
chr7 (24-84)||(13919909-13919969)
chr7 (121-210)||(44350801-44350891)
chr7 (27-192)||(10933983-10934148)
chr7 (25-138)||(17354599-17354712)
chr7 (31-87)||(27320226-27320282)
chr7 (26-181)||(32605328-32605482)
chr7 (26-84)||(2520716-2520774)
chr7 (27-116)||(8073382-8073471)
chr7 (28-113)||(9111431-9111516)
chr7 (34-103)||(44511043-44511112)
chr7 (26-163)||(9648918-9649057)
chr7 (27-75)||(42863569-42863617)
chr7 (135-174)||(36845527-36845566)
chr7 (26-85)||(39254210-39254269)
chr7 (142-184)||(7459455-7459497)
chr7 (142-192)||(7774956-7775006)
chr7 (28-138)||(19494411-19494521)
chr7 (28-138)||(22786149-22786259)
chr7 (26-84)||(25428472-25428530)
chr7 (29-99)||(26703436-26703506)
chr7 (121-178)||(3855842-3855899)
chr7 (27-84)||(19840879-19840936)
chr7 (31-100)||(31959967-31960036)
chr7 (140-184)||(12167317-12167361)
chr7 (27-99)||(14759757-14759829)
chr7 (144-192)||(17813799-17813847)
chr7 (26-113)||(26703537-26703622)
chr7 (24-76)||(27888418-27888470)
chr7 (26-62)||(30742683-30742719)
[»] chr2 (45 HSPs)
chr2 (27-224)||(26767746-26767944)
chr2 (27-208)||(12989188-12989370)
chr2 (31-202)||(6980127-6980299)
chr2 (26-174)||(9470077-9470225)
chr2 (30-202)||(45554567-45554732)
chr2 (26-208)||(10981514-10981695)
chr2 (28-208)||(38464161-38464342)
chr2 (27-184)||(36471864-36472021)
chr2 (26-171)||(44274231-44274375)
chr2 (27-163)||(18511256-18511392)
chr2 (31-165)||(3804585-3804720)
chr2 (31-162)||(16719478-16719609)
chr2 (30-181)||(34142168-34142319)
chr2 (27-210)||(28898035-28898220)
chr2 (47-179)||(25730470-25730602)
chr2 (98-169)||(7919311-7919382)
chr2 (24-138)||(42182883-42182997)
chr2 (27-184)||(11539420-11539580)
chr2 (39-184)||(30718353-30718497)
chr2 (27-182)||(12098894-12099050)
chr2 (27-138)||(4964745-4964856)
chr2 (27-165)||(17188064-17188200)
chr2 (27-174)||(19639090-19639237)
chr2 (27-174)||(19837683-19837830)
chr2 (35-174)||(37652281-37652420)
chr2 (27-113)||(31395542-31395628)
chr2 (27-165)||(32701467-32701605)
chr2 (26-99)||(37719830-37719903)
chr2 (24-113)||(41805873-41805962)
chr2 (26-173)||(1110194-1110342)
chr2 (99-163)||(15884498-15884562)
chr2 (27-174)||(33678152-33678298)
chr2 (27-138)||(15508911-15509022)
chr2 (30-165)||(45270601-45270735)
chr2 (30-99)||(28898034-28898103)
chr2 (130-202)||(36093993-36094064)
chr2 (26-160)||(2476532-2476664)
chr2 (128-171)||(4552879-4552922)
chr2 (128-171)||(25238316-25238359)
chr2 (31-113)||(37228499-37228582)
chr2 (31-113)||(1107039-1107121)
chr2 (69-171)||(35316440-35316542)
chr2 (143-176)||(40899709-40899742)
chr2 (31-115)||(4602962-4603046)
chr2 (27-63)||(19193497-19193533)
[»] chr4 (49 HSPs)
chr4 (30-210)||(43771126-43771307)
chr4 (31-210)||(8108957-8109137)
chr4 (27-210)||(39471154-39471338)
chr4 (27-216)||(50164392-50164582)
chr4 (26-210)||(24834574-24834759)
chr4 (26-171)||(34129439-34129584)
chr4 (27-163)||(49077246-49077382)
chr4 (50-192)||(722177-722319)
chr4 (27-168)||(20225383-20225522)
chr4 (26-184)||(33653515-33653673)
chr4 (35-214)||(20454545-20454723)
chr4 (25-210)||(26361307-26361485)
chr4 (47-192)||(754598-754743)
chr4 (26-171)||(45081781-45081926)
chr4 (26-151)||(50571860-50571985)
chr4 (35-170)||(48339380-48339515)
chr4 (73-214)||(22542424-22542566)
chr4 (26-192)||(40991607-40991773)
chr4 (31-179)||(10169676-10169822)
chr4 (30-169)||(24938456-24938589)
chr4 (47-171)||(50481584-50481708)
chr4 (36-115)||(1559812-1559891)
chr4 (28-192)||(47009187-47009351)
chr4 (77-174)||(31250919-31251016)
chr4 (24-116)||(22592298-22592390)
chr4 (30-162)||(46287441-46287573)
chr4 (27-210)||(49242167-49242351)
chr4 (39-160)||(33995985-33996106)
chr4 (80-169)||(45310989-45311078)
chr4 (26-109)||(39016659-39016742)
chr4 (26-171)||(42862459-42862605)
chr4 (31-109)||(43958152-43958230)
chr4 (65-174)||(29699524-29699632)
chr4 (98-179)||(46536293-46536374)
chr4 (44-109)||(50879470-50879535)
chr4 (26-75)||(53870998-53871047)
chr4 (128-210)||(11895135-11895219)
chr4 (26-163)||(13519943-13520082)
chr4 (68-171)||(37451052-37451153)
chr4 (25-84)||(40812032-40812091)
chr4 (26-165)||(49682836-49682975)
chr4 (69-184)||(52671869-52671984)
chr4 (56-138)||(16178610-16178691)
chr4 (144-210)||(35179725-35179791)
chr4 (57-179)||(41153229-41153351)
chr4 (121-174)||(5044576-5044629)
chr4 (94-208)||(19447195-19447311)
chr4 (39-154)||(46242000-46242113)
chr4 (28-84)||(51206172-51206228)
[»] chr1 (55 HSPs)
chr1 (27-171)||(41958082-41958224)
chr1 (26-210)||(931370-931555)
chr1 (27-199)||(33193047-33193219)
chr1 (25-171)||(6133664-6133809)
chr1 (30-192)||(19101619-19101781)
chr1 (27-210)||(11987623-11987807)
chr1 (25-165)||(44271913-44272053)
chr1 (27-209)||(26980262-26980445)
chr1 (30-168)||(3872676-3872813)
chr1 (30-163)||(22540368-22540501)
chr1 (26-163)||(2225222-2225357)
chr1 (26-156)||(28218102-28218232)
chr1 (26-170)||(10659808-10659953)
chr1 (30-163)||(15523210-15523343)
chr1 (30-163)||(15531204-15531337)
chr1 (23-210)||(8899007-8899195)
chr1 (53-171)||(32211823-32211941)
chr1 (69-214)||(41948141-41948287)
chr1 (30-171)||(8741262-8741405)
chr1 (94-171)||(30678950-30679027)
chr1 (54-208)||(15928579-15928732)
chr1 (28-84)||(39039481-39039537)
chr1 (27-138)||(32848655-32848766)
chr1 (31-138)||(41095681-41095788)
chr1 (26-113)||(44739114-44739201)
chr1 (26-116)||(25543336-25543426)
chr1 (30-171)||(41917995-41918137)
chr1 (51-161)||(49730885-49730995)
chr1 (27-171)||(11135736-11135881)
chr1 (128-209)||(51732375-51732456)
chr1 (68-148)||(45179308-45179388)
chr1 (27-160)||(6325863-6325993)
chr1 (30-84)||(21466697-21466751)
chr1 (25-138)||(14094073-14094186)
chr1 (68-169)||(15468258-15468359)
chr1 (39-210)||(27570234-27570406)
chr1 (24-84)||(41095600-41095660)
chr1 (27-138)||(11430438-11430549)
chr1 (53-184)||(29673498-29673629)
chr1 (26-84)||(11430569-11430627)
chr1 (49-182)||(37552977-37553110)
chr1 (25-113)||(9165297-9165385)
chr1 (27-63)||(11851921-11851957)
chr1 (30-170)||(33059933-33060072)
chr1 (24-84)||(33114099-33114159)
chr1 (96-171)||(33114037-33114112)
chr1 (31-113)||(18157039-18157121)
chr1 (27-113)||(43851132-43851218)
chr1 (33-113)||(4578674-4578752)
chr1 (26-63)||(39019571-39019608)
chr1 (28-156)||(46335092-46335223)
chr1 (111-168)||(47644339-47644396)
chr1 (68-165)||(50539162-50539259)
chr1 (131-171)||(12767367-12767407)
chr1 (27-99)||(13388331-13388403)
[»] chr5 (31 HSPs)
chr5 (26-202)||(28490729-28490906)
chr5 (30-200)||(30325883-30326054)
chr5 (53-184)||(25710498-25710629)
chr5 (27-210)||(34368357-34368541)
chr5 (69-171)||(5413776-5413878)
chr5 (30-171)||(10142015-10142154)
chr5 (31-171)||(28223815-28223955)
chr5 (27-174)||(17537138-17537285)
chr5 (26-171)||(37455345-37455489)
chr5 (26-174)||(43405389-43405537)
chr5 (25-171)||(39246603-39246749)
chr5 (31-163)||(41330440-41330572)
chr5 (45-192)||(34384709-34384856)
chr5 (27-113)||(40971550-40971636)
chr5 (53-202)||(41105577-41105727)
chr5 (27-171)||(42224629-42224774)
chr5 (30-170)||(27592492-27592632)
chr5 (99-174)||(28090265-28090340)
chr5 (31-161)||(25630808-25630938)
chr5 (53-174)||(10950109-10950230)
chr5 (38-202)||(17434857-17435019)
chr5 (25-169)||(28611819-28611963)
chr5 (122-181)||(25919303-25919362)
chr5 (53-163)||(28434865-28434973)
chr5 (50-165)||(36337935-36338050)
chr5 (27-112)||(32309477-32309562)
chr5 (26-208)||(4714745-4714928)
chr5 (77-164)||(31885877-31885964)
chr5 (27-84)||(26072232-26072289)
chr5 (96-184)||(10666714-10666802)
chr5 (27-99)||(17568696-17568768)
[»] scaffold0018 (1 HSPs)
scaffold0018 (61-208)||(27843-27991)
[»] scaffold0204 (1 HSPs)
scaffold0204 (56-170)||(26902-27016)
[»] scaffold0543 (1 HSPs)
scaffold0543 (53-163)||(9687-9797)
[»] scaffold0492 (1 HSPs)
scaffold0492 (53-163)||(11233-11343)
[»] scaffold0194 (1 HSPs)
scaffold0194 (132-207)||(8413-8489)
[»] scaffold0057 (1 HSPs)
scaffold0057 (121-192)||(42944-43016)


Alignment Details
Target: chr3 (Bit Score: 169; Significance: 1e-90; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20493654 - 20493411
Alignment:
Q  1 ttttatggccacgttgtgtgtgcatagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||| ||| |||||||    
T  20493654 ttttatggccacgttgtgtgtgcatagaggaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtat 20493555  T
Q  101 gtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtg 199  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||| |||| ||||||||||    
T  20493554 gtcctaccactttgtgggggttcaatattcaaagtgtagacccacaatgatttaaaccaataagagagtgagtaatagagagagtgttcaaaagagagtg 20493455  T
Q  200 ttggtagcattgctcgtgtgcatatgctactgattatctgtgctcct 246  Q
    |||||   ||||||||||||||||||||||||||||| |||| ||||    
T  20493454 ttggt---attgctcgtgtgcatatgctactgattatgtgtgttcct 20493411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 28529250 - 28529437
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| ||| ||| ||||||||||| |||||| ||||||  ||||||    
T  28529250 gaggaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactgtgtggg--ttcaat 28529347  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctcg 215  Q
     ||||||||||| |||||||||||||||||||||||| ||||||| || || |||| | |||| ||||||||||||| || |||| ||||    
T  28529348 tttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttgttaacattactcg 28529437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 210
Target Start/End: Complemental strand, 52124140 - 52123955
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| |||||||| ||| |||||| ||||||||||| |||| ||| ||| ||| ||||||||||| || | ||||||||| |||||    
T  52124140 agaggaatgctagcaacactcactttttaacgctctctctagcactcacttatttgttggatgaaattaatgtatgtcccactattttgtgggggttcaa 52124041  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    | ||||||||||| |||||||||||||||||||||||| | ||||| || || |||||| |||| ||||||||||||| |||||||    
T  52124040 ttttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 52123955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 41452078 - 41451890
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||| ||||||||| ||||||||||||||  ||| ||| |||||||| ||||||| ||| ||| || |||||||| ||||||||||| || ||||||    
T  41452078 gaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaat 41451979  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctc 214  Q
     ||||||| ||| |||||||||||||||||||||||| ||||||| || || |||||| |||| ||||||||||||| |||||||||||    
T  41451978 tttcaaagagtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcattgctc 41451890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 24734701 - 24734890
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||| ||||||||| ||||||||||||||  ||| ||| |||||||| ||||||| ||| ||| || |||||||| ||||||||||| || |||||    
T  24734701 agaggaatactagcaacactcacttttcaacacaatctctagtactcactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaa 24734800  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctc 214  Q
    | ||||||| |||  ||||||||||||||||||||||| ||||||| || || |||||| |||| ||||||||||||| |||||||||||    
T  24734801 ttttcaaagagtaggcccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcattgctc 24734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 37776886 - 37776702
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| ||||||||||||||| |||  ||||||||||| ||||||  ||| ||| ||||||||||||||||||||||| || ||||||    
T  37776886 gaggaatgctagcaacactcacttttcaacactttctccagcactcactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaat 37776787  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttca-aagagagtgttggtagcatt 210  Q
     ||||||||||| ||| |||||||||||||||| ||| ||||||| || || |||| | ||||| || ||||||||| |||||||    
T  37776786 tttcaaagtgtagacctacaatgatttaaaccactaagagagtgagtattagagagggtgttcataaaagagtgttgctagcatt 37776702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 46450064 - 46450244
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt-gtggggcttcaa 125  Q
    ||||||||||||||||| |||||||| ||||||||||  ||||||||||| ||||||  ||||||| ||||||||||| |||||||| ||| || ||| |    
T  46450064 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttcta 46450161  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagca 208  Q
    | | ||||||||| |||||||||||||||||||||||| ||||||| || || |||||| ||| ||| |||| |||| |||||    
T  46450162 tttgcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttaaaatagagcgttgctagca 46450244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 5452243 - 5452061
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||||||||||||||||| || |||||| ||||||| ||| ||| ||||||| ||| ||||||||||| || ||||||    
T  5452243 gaggaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaat 5452144  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
     ||| ||||||| |||  ||| |||||||| |||||| |||| || || |  |||||| |||| ||||||||||||| |||||||    
T  5452143 tttctaagtgtagacc--caaggatttaaatcaataagagagcgagtattggagagagtgttcaaaagagagtgttgctagcatt 5452061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 208
Target Start/End: Complemental strand, 18427292 - 18427153
Alignment:
Q  68 cactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaaga 167  Q
    ||||||||||||||||| ||| ||| ||||||||||| |||| |||||| || ||| || ||||||||||| |||||||||||||||||||||||| |||    
T  18427292 cactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagaga 18427193  T
Q  168 gtgaataataaagagagcgttcaaagagagtgttggtagca 208  Q
    |||| || || |||| | |||| |||||||||||| |||||    
T  18427192 gtgagtattagagagggtgttc-aagagagtgttgctagca 18427153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 208
Target Start/End: Original strand, 20791296 - 20791475
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||||||||||| |||||||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||||||| |||||||| || |  ||| || |     
T  20791296 gaatgctagcaacgttcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 20791395  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
    ||||||||| | || ||||||||||||||||||| | ||||| || || |||||| |||| |||||||||| || |||||    
T  20791396 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtggtgctagca 20791475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 55452196 - 55452041
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||| |||||||| |||||||| ||||||||||   | |||||||| ||||||| |||||||| |||||||||| ||||||||||| || ||| ||    
T  55452196 gaggaatgttagcaacactcacttttgaacactctctg--gtactcactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctat 55452099  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
     | ||||||||| || || |||||||||||||||| ||||||||| || || ||||||    
T  55452098 ttccaaagtgtagactcataatgatttaaaccaatgaaagagtgagtattagagagag 55452041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 26310615 - 26310495
Alignment:
Q  41 acattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaa 140  Q
    ||||||||||||||||||||||| ||||||| |||| ||||||| ||| ||| ||||||||||| |||| ||| ||  | |||||| ||||||||||| |    
T  26310615 acattcacttttcaacactctctctagcacttactcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtaga 26310516  T
Q  141 cccacaatgatttaaaccaat 161  Q
    |||| ||||||||||||||||    
T  26310515 cccataatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 29755497 - 29755633
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| ||||||||||||| |||||||| ||| ||||| ||||| |||| |||| ||| |||||   || |||||||| || ||||||    
T  29755497 gaggaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaat 29755596  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
     ||||||||||| | | ||||||||||||||||||||    
T  29755597 tttcaaagtgtagatcaacaatgatttaaaccaataa 29755633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 46160945 - 46161101
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| |||||||| ||||||||||  ||||||||||| ||||||| ||| ||| |||  |||||| |||||||||||  | ||| |    
T  46160945 agaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttcta 46161042  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    | | ||||||||| | ||| |||||||||||||||||| ||||||| || || ||||||    
T  46161043 tttccaaagtgtagatccataatgatttaaaccaataagagagtgagtattagagagag 46161101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 182
Target Start/End: Complemental strand, 10948730 - 10948588
Alignment:
Q  40 aacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa 139  Q
    |||| ||||||||||||||| |||  ||||||||||  ||||||| | |  || ||||||||| | |||||||||||    |||||| || |||||||||    
T  10948730 aacactcacttttcaacactttctcaagcactcacttctttattggacgatattaatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaa 10948631  T
Q  140 acccacaatgatttaaaccaataaaagagtgaataataaagag 182  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  10948630 acccacaatgatttaaaccaataaaagagtgagtattaaagag 10948588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 171
Target Start/End: Original strand, 22604577 - 22604701
Alignment:
Q  47 acttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccaca 146  Q
    |||||| || |||||||||| ||||||||||||||||| ||  ||| ||||||||||| |||| ||||||||  |||||| |||||| |||| || ||||    
T  22604577 actttttaatactctctttaacactcactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcaca 22604676  T
Q  147 atgatttaaaccaataaaagagtga 171  Q
    |||||||||||  |||| |||||||    
T  22604677 atgatttaaacttataagagagtga 22604701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 192
Target Start/End: Complemental strand, 50156831 - 50156678
Alignment:
Q  37 agcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtg 136  Q
    ||||||| |||||||||||||| ||||     ||| ||| |||||||||||| ||| ||||||||| | || |||||| |||| |||||| || ||||||    
T  50156831 agcaacactcacttttcaacacactctgat--acttacttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtg 50156734  T
Q  137 taaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    || |||||||||||||||||||||||| ||||||| || || | |||| |||||||    
T  50156733 tagacccacaatgatttaaaccaataagagagtgagtattacaaagagtgttcaaa 50156678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 19345133 - 19345043
Alignment:
Q  77 atttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaaga 167  Q
    |||||||| ||| ||| ||||||||||| |||||||||| ||| |||||| |||||| |||| || |||||||||||||||||||||||||    
T  19345133 atttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataaaaga 19345043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 192
Target Start/End: Complemental strand, 8825150 - 8824997
Alignment:
Q  39 caacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgta 138  Q
    ||||| ||||||||||||  ||||| ||| |||||| | ||||||  ||| ||| ||| ||||||| |||| ||| || || |||||| |||||||| ||    
T  8825150 caacactcacttttcaaccatctctctagtactcacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtcta 8825051  T
Q  139 aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
     || |||||| |||||||||||||| ||||||| || ||||||||| |||||||    
T  8825050 cactcacaataatttaaaccaataagagagtgagtattaaagagagtgttcaaa 8824997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 27243042 - 27243225
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||| |||||||||||| || ||||| |||||||||| || ||||||||| ||||||| ||  ||| |||| |||||| |||||||| || || ||| ||    
T  27243042 gagggatgctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccat 27243141  T
Q  127 attcaaagtgta-aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
     | |||||||||  ||||||| |||||||| ||||| | ||||||| || || | |||| |||| ||||||||||||| |||||    
T  27243142 ttccaaagtgtatgacccacattgatttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgttgctagca 27243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 48351431 - 48351569
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||| ||||| ||| |||| |||||||||||||  || ||||| ||||||| ||  ||| ||| ||||||  || |||||||| || ||||    
T  48351431 tagaggaatgctaacaacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttca 48351530  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    || ||||||||||| | ||| ||||||||||| ||||||    
T  48351531 attttcaaagtgtatatccataatgatttaaatcaataa 48351569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 208
Target Start/End: Original strand, 14236019 - 14236198
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||| ||||| | | ||||  |||||||||||||||||||||  ||||||| ||| ||| ||| ||||||| |||||||| || |  ||| || |     
T  14236019 gaatgctaccaacacttatttttgcacactctctttagcactcactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttc 14236118  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
    ||||||||| | ||||||| ||||| |||||||||| ||||| || || | |||| |||| ||| ||||||||| |||||    
T  14236119 caaagtgtagatccacaataatttagaccaataaaaaagtgagtattagaaagagtgttcaaaacagagtgttgctagca 14236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 138793 - 138915
Alignment:
Q  60 ctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaacca 159  Q
    |||| |||||||||||| ||||||||||| ||| ||||||||||  |||| |||||  |  |||||| || ||| |||||||  ||||||||||||| ||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaacttacaatgatttaaatca 138892  T
Q  160 ataaaagagtgaataataaagag 182  Q
    |||||||||| | || |||||||    
T  138893 ataaaagagtaagtattaaagag 138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 29389193 - 29389108
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgt 115  Q
    |||||||||||||| |||||||| | ||||| ||||| ||||||||| || |||||||  ||| ||||||||||| ||||||||||    
T  29389193 gaatgctagcaacactcacttttgagcactcactttaacactcactctttcattgaataaaatcaatgtatgtcccaccactttgt 29389108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 192
Target Start/End: Complemental strand, 2419597 - 2419482
Alignment:
Q  77 atttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataat 176  Q
    |||||||| ||||||| |||| ||||||||||||||||   |  ||| || | ||| ||||| |||||||||||||||||||||||| | ||||| || |    
T  2419597 atttattggatggaatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtatt 2419498  T
Q  177 aaagagagcgttcaaa 192  Q
    ||||| || |||||||    
T  2419497 aaagaaagtgttcaaa 2419482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 29588849 - 29588751
Alignment:
Q  94 aatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    ||||||||||||  |||||| || |  |||||| ||||||||||| ||||||||||||||||| |||||| ||||||| |  || |||||| |||||||    
T  29588849 aatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagtgttatagagagtgttcaaa 29588751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 41387564 - 41387686
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||| ||| | ||||||||||||  |||||||||||||||||||| ||  |||  |||||| ||  || | |||||| || || ||| |||    
T  41387564 aatgctagcaacactcattattcaacactctc--tagcactcactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttc 41387661  T
Q  131 aaagtgtaaacccacaatgatttaa 155  Q
    |||||| | ||||||||||||||||    
T  41387662 aaagtgcagacccacaatgatttaa 41387686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 18722639 - 18722583
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttatt 83  Q
    ||||||||||| ||||| ||||||||| ||||||||| ||||||||||| |||||||    
T  18722639 gaggaatgctaacaacactcacttttctacactctctctagcactcacttatttatt 18722583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 40716041 - 40715893
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    |||| |||||||| ||||||||||||||||||| |||||||||||| |||||    || ||| |||||||| |  | ||||||||| || |||||| ||     
T  40716041 aatgttagcaacactcacttttcaacactctctctagcactcactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaattttt 40715942  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaa 179  Q
    ||| |||  ||  |||||||||||||| ||||  ||| |||||| ||||    
T  40715941 aaaatgttgacatacaatgatttaaactaataggagattgaatattaaa 40715893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 54140887 - 54140959
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    ||||||||||||||||| || ||||| | |||| ||| |||||||||||||||||||| ||| ||| ||||||    
T  54140887 gaggaatgctagcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgta 54140959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 2008992 - 2009138
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||  |||||||| ||| |||||||||   ||||||| |||||   ||| ||| ||||||||||| |||||||| ||  | |||| |    
T  2008992 gaggaatgctagcaacgctcactttttaaccctctctttattgctcactcttttatcagatgaaattaatgtatgtcc-accactttatgtagtttcagt 2009090  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
     || |||||||| || |||||| ||||||| |||||||| | ||||||    
T  2009091 ttttaaagtgtagactcacaataatttaaatcaataaaaaaatgaata 2009138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 37600314 - 37600227
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||||||||||| ||||| || ||||| | |||||||| |||||| ||||| |||||||  || ||| ||||||||||| ||||||||    
T  37600314 agaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 37600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 46575944 - 46576126
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||| ||||| || || |||||||||||||  | |||||||||  ||||||  || ||  ||||||||||| |||||||| || || ||| |    
T  46575944 agaggaatgctatcaacactctctcttcaacactctctcaaacactcactctcttattggctgaaaccaatgtatgtcccaccactttttgtgggttcca 46576043  T
Q  126 tattcaaagtgta-aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagca 208  Q
    | |||||| ||||   |||||| |||||||| || || | ||||||| || ||||||||| ||| ||| ||||||||| |||||    
T  46576044 ttttcaaaatgtacgccccacattgatttaaccctattagagagtgagtattaaagagagtgttgaaa-agagtgttgctagca 46576126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 138
Target Start/End: Complemental strand, 54141047 - 54140965
Alignment:
Q  56 cactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgta 138  Q
    |||||||| ||||||||||||||||||||  || ||| ||||||||||| ||||||||  | || ||| || |||||||||||    
T  54141047 cactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccaccactttacgtgggttccattttcaaagtgta 54140965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 24429124 - 24429051
Alignment:
Q  111 tttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    |||||| || |||||| || |||||||| | |||||||||||||||||||||||| ||||| || || ||||||    
T  24429124 tttgtgagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagtattagagagag 24429051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 30624633 - 30624739
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| |||||||| | ||||||||  | ||||||||| ||||||||||  ||| |||||||||   ||||||||||| |  |||||| ||    
T  30624633 gaatgctagcaacactcacttttgagcactctct--aacactcactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaatttt 30624730  T
Q  130 caaagtgta 138  Q
    |||| ||||    
T  30624731 caaaatgta 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 46237220 - 46237143
Alignment:
Q  36 tagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||||||| || ||||| | |||||||| ||||| |||||| ||||||| ||| ||| ||||||||||| ||||||||    
T  46237220 tagcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgtatgtcccaccacttt 46237143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 15790551 - 15790409
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    |||||||||| ||| | ||||||||||||||| | | || |||| ||| |||||||| ||  ||| ||||||||||  |||| ||| ||| |   ||||     
T  15790551 aggaatgctaacaaaactcacttttcaacactttttctaacacttacttatttattggataaaatcaatgtatgtctcaccattttatggtgggacaatt 15790452  T
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    |||||||||| |  ||| |||||||||||||||||| |||||||    
T  15790451 ttcaaagtgt-aggccataatgatttaaaccaataagagagtga 15790409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 22856399 - 22856336
Alignment:
Q  39 caacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgt 102  Q
    ||||| ||||||||||||||| ||||||| | |||||| |||||||| | |||| |||||||||    
T  22856399 caacactcacttttcaacactttctttagtattcactcttttattgagtagaattaatgtatgt 22856336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 159
Target Start/End: Complemental strand, 41707609 - 41707490
Alignment:
Q  40 aacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa 139  Q
    ||||||||||||| | |||||||| || |||||||||  | |||| ||  ||| |||||||||   | ||||||||| || |||||| || ||||| ||     
T  41707609 aacattcacttttgagcactctctctaacactcactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatag 41707510  T
Q  140 acccacaatgatttaaacca 159  Q
    ||||||||| ||||||||||    
T  41707509 acccacaataatttaaacca 41707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 20955753 - 20955719
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactc 60  Q
    ||||||||||||||||||||||||||| |||||||    
T  20955753 agaggaatgctagcaacattcacttttaaacactc 20955719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 38414711 - 38414832
Alignment:
Q  94 aatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaag 193  Q
    ||||||||||| |||| |||||| || || ||| || |||||||| | |||| || |||||||||||||| ||||||| |  ||||||||  | |||||     
T  38414711 aatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtgagtgttaaagagaatgctcaaa- 38414809  T
Q  194 agagtgttggtagcattgctcgt 216  Q
    |||||| || ||||||| |||||    
T  38414810 agagtgctgttagcattcctcgt 38414832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 44844029 - 44844123
Alignment:
Q  78 tttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa-acccacaatgatttaaaccaataaaagagtga 171  Q
    ||||||||||  ||||||||||||||| |||| ||  || |  |||||| || ||||||||  |||||||||||||||| ||||||||| |||||    
T  44844029 tttattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtga 44844123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 37600124 - 37600181
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    ||||||||||||||||| || ||||| | |||||||| |||||| ||||| |||||||    
T  37600124 gaggaatgctagcaacactctcttttgagcactctctctagcacccactcttttattg 37600181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 52951543 - 52951494
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactc 76  Q
    ||||| ||||||||||| || ||||| |||||||||| ||||||||||||    
T  52951543 gaggagtgctagcaacactctctttttaacactctctctagcactcactc 52951494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 742025 - 742089
Alignment:
Q  99 atgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||| ||||||||||| || ||| || |  |||||||| |||||||||||||||||| |||||    
T  742025 atgtcccaccactttgtgtggattctatttctaaagtgtagacccacaatgatttaaactaataa 742089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 752461 - 752525
Alignment:
Q  99 atgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||| ||||||||||| || ||| || |  |||||||| |||||||||||||||||| |||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataa 752525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 50661700 - 50661564
Alignment:
Q  32 atgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattca 131  Q
    |||| ||||||| || ||||| |||||||||| || |||| |||| ||||||  ||  ||| |||| |||||| |||||||| || || ||| || | ||    
T  50661700 atgcaagcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttcca 50661601  T
Q  132 aagtgtaa-acccacaatgatttaaaccaataaaaga 167  Q
    || ||||  ||||||| |||||||| |||||||||||    
T  50661600 aaatgtatgacccacattgatttaacccaataaaaga 50661564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 16983390 - 16983575
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||| |||||||| ||  ||| | | ||||||| | |||||||||||| |||||    
T  16983390 agaggaatgctagcaacactcacttttcaacactctatctagcactcactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaa 16983489  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    | ||||||||||| || ||||||||||||||||||||| ||||||| || || |||||| |||| ||||||||||||| |||||||    
T  16983490 ttttcaaagtgtagactcacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 16983575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 9952936 - 9952765
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    |||||||| |||||| ||||||||||||||||| ||||||||| |  ||||||| ||| ||| |||| |||||| ||||||||||| |  |||||| |||    
T  9952936 aatgctagtaacatttacttttcaacactctctctagcactcatttttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttc 9952837  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttg 202  Q
    ||||||||||||||||||||||||||||||||| | | ||| || | ||||||| |||||||||||||||||    
T  9952836 aaagtgtaaacccacaatgatttaaaccaataagataatgagtatttaagagagtgttcaaagagagtgttg 9952765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 1977357 - 1977191
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||| | |||||||| |||||||||| |||||||||||| | | ||| ||| ||| ||||||||||| ||||||||||| || |||||    
T  1977357 agaggaatgctagcaatactcactttttaacactctctctagcactcactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaa 1977258  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    | ||||||||||| | |||||||||||||||||||||||||||||| || || |||| | |||||||    
T  1977257 ttttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagtattagagagtgtgttcaaa 1977191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 32072098 - 32072230
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||| ||||||||||| ||||||||||| || |||||| ||     
T  32072098 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaattttt 32072197  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||||| ||||||||| ||||||| ||||||    
T  32072198 aaagtgtagacccacaattatttaaatcaataa 32072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 35151912 - 35151728
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||| ||||||||| |||||||| |||||||| ||||||| | |||| ||||||| ||| ||| ||||||||||| |||| ||||||||| ||||||    
T  35151912 gaggaatactagcaacactcactttttaacactctttttagcatttactcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaat 35151813  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
     || |||||||| ||||||||| ||| |||| ||||| | |||||||| |||| |||| |||| ||||||||||||| |||||||    
T  35151812 ttttaaagtgtagacccacaataattcaaactaataagaaagtgaatattaaatagagtgttcaaaagagagtgttgctagcatt 35151728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 169
Target Start/End: Original strand, 8903852 - 8903991
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| |||||||| ||| ||||||||||||||| ||| |||||||  ||||||  ||| ||| ||||||||||| |||||||||||  | |||||| ||    
T  8903852 gaatgttagcaacactcatttttcaacactctctctagtactcacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaatttt 8903951  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagt 169  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  8903952 caaagtgtagacccacaatgatttaaaccaataagagagt 8903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 28414049 - 28413912
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||| ||||| ||||||||||||||||||| |||| ||||||  ||||||  ||| ||| ||||||||||| ||||||||||| |  |||||| ||    
T  28414049 gaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaatttt 28413950  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaaga 167  Q
    |||||| || ||||| ||||||||||||||||||||||    
T  28413949 caaagtatagacccataatgatttaaaccaataaaaga 28413912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 207
Target Start/End: Original strand, 5979878 - 5980057
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    |||||||||||||||| | ||||||||||||||||| ||| |  ||||| | ||||| |||  || ||||||||||| ||||||||||| || ||||||     
T  5979878 aggaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaatt 5979977  T
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagc 207  Q
    |||||||||| ||| ||||||| ||| ||||||||| ||||||| || || |||||| |||| ||||||||||||| ||||    
T  5979978 ttcaaagtgtgaactcacaatggttt-aaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagc 5980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 170
Target Start/End: Original strand, 8914767 - 8914911
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| |||||||| | | |||||| || ||||||||| || |||| ||  ||  ||||||||||| ||||||||||| || ||||     
T  8914767 agaggaatgctagcaacactcacttttgagcgctctctctaacactcactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcat 8914866  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
    | ||||||||||| |||||||||||||||||||||||| ||||||    
T  8914867 ttttcaaagtgtagacccacaatgatttaaaccaataagagagtg 8914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 24056098 - 24055964
Alignment:
Q  37 agcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtg 136  Q
    ||||||| |||||||||||| ||||||||||||||| ||| |||||   ||| ||| ||||||||||| |||||||||||    |||||| |||||||||    
T  24056098 agcaacactcacttttcaacgctctctttagcactcgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaagtg 24055999  T
Q  137 taaacccacaatgatttaaaccaataaaagagtga 171  Q
    || ||||||||| |||||||||||||| |||||||    
T  24055998 tagacccacaattatttaaaccaataagagagtga 24055964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 210
Target Start/End: Complemental strand, 34861369 - 34861191
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||||| |  |||||||||||||||||||  ||||||||||| ||||||| ||| ||| ||||||||||| |||||||||||  | |||||    
T  34861369 agaggaatgctagcacctctcacttttcaacactctct--agcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaa 34861272  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    | ||||||||     |||||||| |||||||||||||| ||||||| || ||  ||| | |||| ||||||||||||| |||||||    
T  34861271 ttttcaaagt-----cccacaataatttaaaccaataagagagtgagtattagggagggtgttcaaaagagagtgttgctagcatt 34861191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 17499390 - 17499234
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    ||||||||||| ||||||||  || ||||||| ||| ||| ||| ||||||| |||| ||||||  | |||||| ||||||||||| | |||||||||||    
T  17499390 caacactctctctagcactctatcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatt 17499291  T
Q  153 taaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagcatt 210  Q
    ||||||||||| ||||||| || || ||||||   ||||| ||||||||| |||||||    
T  17499290 taaaccaataagagagtgagtattagagagagttgtcaaa-agagtgttgctagcatt 17499234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 23685131 - 23685264
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||| || |  ||| || |     
T  23685131 gaatgctagcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 23685230  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataa 163  Q
    ||||||||| |  | |||||||||||||||||||    
T  23685231 caaagtgtagattcgcaatgatttaaaccaataa 23685264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 43506534 - 43506676
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| |||||||| ||||||||||  | ||||||||  ||||||| ||  ||| ||||||||| | ||||||||||| || ||| |    
T  43506534 agaggaatgctagcaacactcacttttgaacactctct--aacactcactt-tttattggatataatcaatgtatgttccaccactttgtgtgggttcta 43506630  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
      ||||| ||||| |||||||||||||||| ||||||| |||||||    
T  43506631 ctttcaatgtgtagacccacaatgatttaagccaataagagagtga 43506676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 11962857 - 11962677
Alignment:
Q  34 gctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaa 133  Q
    |||||| ||| |||||||||||||| |||||||  |||||||| ||||||||||  ||| || |||| ||| |||| ||| ||  | |||||| ||||||    
T  11962857 gctagcgacactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaa 11962758  T
Q  134 gtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctc 214  Q
    ||||| | ||| |||||||||||||||||||| || || || |||  |||| |||| ||||||  ||||| |||||||||||    
T  11962757 gtgtagatcca-aatgatttaaaccaataaaaaagcgagtattaacaagagtgttcaaaagaggatgttgctagcattgctc 11962677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 4674911 - 4675068
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| ||||||||||||||||| || ||||||||||  |||||||| ||||||  |||    ||||  |||||||| ||||||||| |  || ||| ||    
T  4674911 gaatgttagcaacattcactttt-aatactctctttaaaactcactcttttattagatg----aaatcaatgtcctatcactttgtgtgagtttaatttt 4675005  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    |||||||||  | ||||||||||||||||||||||| | |||||| || | |||| |||||||    
T  4675006 caaagtgtagtcacacaatgatttaaaccaataaaaaaatgaatattagaaagagtgttcaaa 4675068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 36629654 - 36629792
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||| ||| | ||| |||| |||||| ||||||||||| |||| ||||||  ||| |||||||||||||  || |||| ||||||  |||     
T  36629654 tagaggaatgctaacaatactcatttttgaacactatctttagcacttactcttttattagatgaaataaatgtatgtattatcactgtgtggg--ttct 36629751  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
    || | ||| ||||| |||| ||||||| |||||||||||||    
T  36629752 atttccaatgtgtagacccgcaatgatctaaaccaataaaa 36629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 35797430 - 35797528
Alignment:
Q  65 tagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    ||||| |||||| ||||||| ||  ||| ||||||||| | ||||||||||| |  |||||| || |||||||||| ||||||||||||||| ||||||    
T  35797430 tagcattcactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaataa 35797528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 31691692 - 31691635
Alignment:
Q  29 ggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaa 86  Q
    ||||||||||||||| |||||||| || |||||||||| ||||||||| |||||||||    
T  31691692 ggaatgctagcaacactcacttttgaaaactctctttaacactcactcttttattgaa 31691635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 41727427 - 41727584
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||  ||||| |||||||| |||||||||||||||| |||||| ||| ||  ||  ||| ||||||||||| ||| |||||||  | |||  |    
T  41727427 gaggaatgctgacaacactcacttttgaacactctctttagcaatcactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgt 41727526  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
     || || ||||| || || ||||||||||||||| || ||||||| || || ||||||    
T  41727527 ttttaatgtgtagactcataatgatttaaaccaacaagagagtgagtattagagagag 41727584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 35819198 - 35819269
Alignment:
Q  96 tgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaaga 167  Q
    ||||||||| |||| |||||| ||  ||||| |||||||| || |||||||||||||||||| |||||||||    
T  35819198 tgtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataaaaga 35819269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 17741659 - 17741573
Alignment:
Q  78 tttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaa 164  Q
    ||||||| ||| ||| ||||||||||| |||| |||||| |  |||||| ||||||||||| ||| | |||| ||||||||||||||    
T  17741659 tttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataaa 17741573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 36804970 - 36804880
Alignment:
Q  79 ttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagt 169  Q
    |||||| ||||||| ||||||||||| |||| |||||| || |||||| |||||| | || | ||||||| ||||||| |||||| |||||    
T  36804970 ttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaatcaataagagagt 36804880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 38091537 - 38091500
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctct 63  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  38091537 agaggaatgctagcaacattctcttttcaacactctct 38091500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 7493453 - 7493381
Alignment:
Q  100 tgtcctaccactttgtgg-ggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    |||| ||||||||||||  || ||| || ||||||||||| || ||||||||||||||||||||| |||||||    
T  7493453 tgtcttaccactttgtgttgggttctattttcaaagtgtagactcacaatgatttaaaccaataagagagtga 7493381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 13856578 - 13856506
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    |||||||||||| ||||| ||||| |||||||||||| || ||| ||||| ||||||| ||| ||| ||||||    
T  13856578 gaggaatgctagtaacatccacttctcaacactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 31301111 - 31301258
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||  |||| |||||||| |||||| | |   |||||||||| ||||||| ||| ||| ||||||||| | ||||||||||| |  ||| |    
T  31301111 agaggaatgctaataacactcacttttgaacactatttccggcactcactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttcta 31301210  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    | ||||| ||||| |  || ||| |||||||||||||| ||| ||||||    
T  31301211 ttttcaatgtgtaga-tcataataatttaaaccaataagagaatgaata 31301258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 35689506 - 35689622
Alignment:
Q  56 cactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa-acccacaatgattta 154  Q
    |||||||| |||||||||||  ||||||| ||| ||| ||||||||||| |||||||| || |  ||| || ||||||||||||  |||||| || |||     
T  35689506 cactctctctagcactcacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgtaagtcccacattgttttc 35689605  T
Q  155 aaccaataaaagagtga 171  Q
    | ||||||||| |||||    
T  35689606 acccaataaaaaagtga 35689622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 45246432 - 45246572
Alignment:
Q  30 gaatgctagcaacattcactttt-ca-acactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    ||||||||| |||| |||||||| || |||||||||||||||||||||  ||||||| ||  ||| ||||||||||  |||||||| || |  ||| ||     
T  45246432 gaatgctagtaacactcacttttgcacacactctctttagcactcactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatt 45246531  T
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
    | ||||||||| | |  |||||||||||| |||||| ||||    
T  45246532 tccaaagtgtagatctgcaatgatttaaatcaataagagag 45246572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 1205829 - 1205880
Alignment:
Q  32 atgctagcaacattcacttttcaacactctctttagcactcactcatttatt 83  Q
    |||||||||||| || ||||| | ||||||||||||||||||||| ||||||    
T  1205829 atgctagcaacactctcttttgagcactctctttagcactcactcttttatt 1205880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 172
Target Start/End: Complemental strand, 3099675 - 3099644
Alignment:
Q  141 cccacaatgatttaaaccaataaaagagtgaa 172  Q
    ||||||||||||||||||||||||||||||||    
T  3099675 cccacaatgatttaaaccaataaaagagtgaa 3099644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 9452532 - 9452567
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctc 62  Q
    |||||||||||||||||||| |||||||||||||||    
T  9452532 gaggaatgctagcaacattctcttttcaacactctc 9452567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 1205991 - 1205941
Alignment:
Q  49 ttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    |||| ||||||||||||||||||||||| |||||||| || ||| ||||||    
T  1205991 ttttgaacactctctttagcactcactcttttattgagtgaaatcaatgta 1205941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 6098866 - 6098772
Alignment:
Q  121 ttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcg-ttcaaagagagtgttggtagcattgctc 214  Q
    |||||| ||||||||||| | ||||||| ||||||| |||||| ||||||| || || |||||  | || ||||||||||||| || ||||||||    
T  6098866 ttcaattttcaaagtgtagatccacaataatttaaatcaataagagagtgagtattagagagaatgtttaaaagagagtgttgttatcattgctc 6098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 13214543 - 13214613
Alignment:
Q  78 tttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaat 148  Q
    ||||||| ||||||| ||||||||||| | || ||||||  | |||||| ||||||||||| |||||||||    
T  13214543 tttattggatggaattaatgtatgtcccatcattttgtgtagattcaattttcaaagtgtagacccacaat 13214613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 34952507 - 34952573
Alignment:
Q  94 aatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaa 160  Q
    ||||||||||| |||| ||||||||  |||||| |||||  |||| |||| ||||||||||||||||    
T  34952507 aatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaa 34952573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 13407508 - 13407315
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||  ||||||| ||  ||||  ||||||||| || |||| |||  ||||||| ||  ||| ||||||||||| |||| |||  | || ||| |    
T  13407508 agaggaatgtcagcaacactcttttttggacactctctctaacactaacttttttattggataaaatcaatgtatgtcccaccattttaagtgggttcta 13407409  T
Q  126 tattcaaagtgtaa-acccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa-gagagtgttggtagcattgctcgtg 217  Q
    | |||||||||||  ||||||| |||||||| ||||| | ||| ||| |  || |||||| ||||||| |||||||||| ||||||| ||||||    
T  13407408 ttttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtgttagagagagtgttcaaaagagagtgttgctagcattcctcgtg 13407315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 17716856 - 17716977
Alignment:
Q  33 tgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaa 132  Q
    ||||| ||||| |||||||||| ||||||  ||| |||||||   ||||||| ||| ||| ||| ||||||| || | ||| || || || ||| |||||    
T  17716856 tgctaacaacactcacttttcatcactct--ttaacactcacagttttattggatgaaatcaatatatgtcccactattttatgtgggtttaattttcaa 17716953  T
Q  133 agtgtaaacccacaatgatttaaa 156  Q
    |||||| ||||||||||| |||||    
T  17716954 agtgtagacccacaatgagttaaa 17716977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 34952458 - 34952494
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctct 63  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  34952458 gaggaatgctagcaacactcactttttaacactctct 34952494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 1e-43; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 34905331 - 34905516
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||| ||||||||||||| ||| ||||||||||||||| || ||||||||| ||||||| ||| ||| ||||||||||| ||||||||||  || ||||    
T  34905331 tagagaaatgctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttca 34905430  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcat 209  Q
    || ||||||||||| |||||||||||||||||||||||| ||||||| || || |||| | |||| ||||||||||||| ||||||    
T  34905431 attttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagggtgttcaaaagagagtgttgctagcat 34905516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 10133338 - 10133165
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| ||| |||| ||||||||||||||||||| || ||||||||||||||||| ||| ||| | ||||||||| |||||||| ||||| |||||| ||    
T  10133338 gaatggtagaaacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaatttt 10133239  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttg 202  Q
    ||||||||| | |||||||||||||||||||||||||||||| || ||||| |||  ||| |||||||||||||    
T  10133238 caaagtgtagaaccacaatgatttaaaccaataaaagagtgagtattaaagtgagtattcaaaagagagtgttg 10133165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 40 - 210
Target Start/End: Original strand, 5106308 - 5106479
Alignment:
Q  40 aacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa 139  Q
    |||| ||||||||||||||| ||| || ||||||||  ||||||| ||  ||| ||||||||||| ||||||||||| ||  ||||| |||||||||||     
T  5106308 aacactcacttttcaacactttctctaacactcacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtac 5106407  T
Q  140 acccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    |||||||| ||||||||||||||| |||||||||| || |||| | |||| |||||| |||||| |||||||    
T  5106408 acccacaaggatttaaaccaataatagagtgaatattagagagtgtgttcaaaagagggtgttgttagcatt 5106479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 32122791 - 32122942
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||| ||||||| ||||| || |||||||||||||| |  | |||||||| |||||||| ||| ||| ||| ||||||| |||| ||||||||  |||||    
T  32122791 agagaaatgctaacaacactctcttttcaacactctttccaccactcacttatttattggatgaaatcaatatatgtcccaccattttgtgggagttcaa 32122890  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataata 177  Q
    | ||||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  32122891 ttttcaaagtgtagacccacaatgatttaagccaataaaaaagtgaataata 32122942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 445815 - 445972
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||| | ||| ||||||||||| ||| |||||||||||  ||||||| ||| ||| ||||||||||  ||||||||||| || ||||||    
T  445815 gaggaatgctagcaatactcatttttcaacactatctctagcactcacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaat 445914  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
     |||||||| || |  ||||||||||||||||||||| ||| ||| || || ||||||    
T  445915 tttcaaagtctagagtcacaatgatttaaaccaataagagaatgagtattagagagag 445972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 192
Target Start/End: Original strand, 21987292 - 21987454
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||| ||| |||||||| || |  ||| || |     
T  21987292 gaatgctaacaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttc 21987391  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    ||||||||| | || ||||||||||||||||||| | ||||| || || |||||| |||||||    
T  21987392 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaa 21987454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 16852106 - 16852013
Alignment:
Q  77 atttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
    |||||||  ||| ||||||||||||||| |||||||||| ||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  16852106 atttattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtg 16852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 12753943 - 12753767
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||| |||||||| | ||||| |||||| || |||| ||  |||| ||| |||||| ||||||||||| || ||| ||    
T  12753943 gaggaatgctagcaacactcacttttgaacactctttatagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctat 12753844  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgtt-caaagagagtgttg 202  Q
     ||||  ||||| || ||||||||||||||| |||||||||| || || || |||||| |||  |||||||||||||    
T  12753843 tttcagggtgtacactcacaatgatttaaactaataaaagagcgagtattagagagagtgttgaaaagagagtgttg 12753767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 184
Target Start/End: Complemental strand, 31116296 - 31116150
Alignment:
Q  38 gcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgt 137  Q
    |||||| |||||||| |||||||||| || || |||||| | ||||| ||| ||| ||||||||||| || |||||||| |  ||| || | ||| ||||    
T  31116296 gcaacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt 31116197  T
Q  138 aaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    |||||||||||||||||||||||||| ||||||| || || ||||||    
T  31116196 aaacccacaatgatttaaaccaataagagagtgagtattagagagag 31116150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 2675892 - 2676049
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||| | |||||||| ||| ||||||||| | | |||| || |||||| ||||||||||| | | ||||||||||| ||||||||||   | || |||    
T  2675892 gaggaacggtagcaacactcatttttcaacattttttttaacattcactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaat 2675991  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
     |||||| |||| |||||||||| ||||||||||||||| ||||| || || ||||||    
T  2675992 tttcaaaatgtagacccacaatggtttaaaccaataaaaaagtgagtattagagagag 2676049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 183
Target Start/End: Complemental strand, 32599124 - 32598975
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||||| |||||| |||||| | | || |   ||||| ||||||| |||||||| ||||||||||  |||||||||| || | | || | |    
T  32599124 aatgctagcaacatttacttttgaacactttatctacc---cactcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttcc 32599028  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagaga 183  Q
    |||||||| |  |||||||||||||| |||||||||||||| || ||||||||    
T  32599027 aaagtgtagattcacaatgatttaaatcaataaaagagtgagtattaaagaga 32598975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 13001692 - 13001846
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||||||| |||| |||||||||| |||||||| || || ||| |  || |||| ||  ||||||||||||||  | || ||| || || |||||| |     
T  13001692 gaatgctagtaacactcacttttcagcactctctctaacattcattttttcattggataaaataaatgtatgtcacatcattttatgtggattcaatttg 13001791  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    |||| |||||||| | || |||||||||||||||||||||||||| | |||||||    
T  13001792 caaaatgtaaacctataaagatttaaaccaataaaagagtgaatattgaagagag 13001846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 210
Target Start/End: Complemental strand, 19090399 - 19090213
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||| ||||| || ||||| | |||||||| |||||| ||||| |||||||  || ||| ||||||||||| |||||||| || || ||| |    
T  19090399 agaggaatgctaacaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 19090300  T
Q  126 tattcaaagtgta-aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    | | |||||||||   || ||| ||| || ||||||||||||||||| |  || |||||| | || ||||||||||||| |||||||    
T  19090299 tttccaaagtgtaggtcctacattgaattcaaccaataaaagagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 19090213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 8442021 - 8441867
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||||| || ||| ||||||||||||||| || ||||||||||||||||| ||| ||| | ||            |||||||||  |||||    
T  8442021 agaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatcattg------------ctttgtgggagttcaa 8441934  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    | ||||||||||| |||  |||| || ||||||||||||||||||| || || |||||| |||||||    
T  8441933 ttttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaa 8441867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 8450825 - 8450671
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||||| || ||| ||||||||||||||| || ||||||||||||||||| ||| ||| | ||            |||||||||  |||||    
T  8450825 agaggaatgctagcagcactcatttttcaacactctctctaacactcactcatttattggatgaaatcattg------------ctttgtgggagttcaa 8450738  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    | ||||||||||| |||  |||| || ||||||||||||||||||| || || |||||| |||||||    
T  8450737 ttttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagtattagagagagtgttcaaa 8450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 210
Target Start/End: Complemental strand, 12780882 - 12780760
Alignment:
Q  87 tggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcg 186  Q
    |||||| ||||||||||  || ||||||||  | |||||| ||||||||||| | ||||||||||||||||||||||  || |||||| || |||| | |    
T  12780882 tggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagggaatgaatattagagagggtg 12780783  T
Q  187 ttcaaagagagtgttggtagcatt 210  Q
    |||||| ||||| ||| |||||||    
T  12780782 ttcaaa-agagtattgctagcatt 12780760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 210
Target Start/End: Complemental strand, 17144822 - 17144672
Alignment:
Q  59 tctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaacc 158  Q
    ||||| ||||||| |||  ||||||||||| ||| ||| ||||| | |||  ||||||  | || ||| ||||||||||| ||||||||||||||||||     
T  17144822 tctctctagcacttactattttattgaatgaaatcaatatatgttccaccgttttgtgtaggttaaattttcaaagtgtagacccacaatgatttaaact 17144723  T
Q  159 aataaaagagtgaataataaagagagcgttcaaagagagtgttggtagcatt 210  Q
    |||||| |||| | || ||||||||| | | ||| ||||||||| |||||||    
T  17144722 aataaaggagtaagtattaaagagagtggttaaa-agagtgttgttagcatt 17144672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 31443956 - 31444085
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||| |||||||||| | | ||||||||||||| |||| |||||| || ||||||| ||| ||| ||| ||||| | |||| ||||||  | ||||||    
T  31443956 gaggaaggctagcaacaataatttttcaacactctttttaacactcattcttttattggatgaaattaatttatgttccaccattttgtgtcggttcaat 31444055  T
Q  127 attcaaagtgtaaacccacaatgatttaaa 156  Q
     ||||||||||  || ||||| ||||||||    
T  31444056 tttcaaagtgttgactcacaaggatttaaa 31444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 35128900 - 35128795
Alignment:
Q  33 tgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaa 132  Q
    ||||||||||| || ||||| |||||||||| ||||| |||||| |||||||  |  ||| ||||||||||| |||||||| || || ||| || |||||    
T  35128900 tgctagcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaa 35128801  T
Q  133 agtgta 138  Q
    ||||||    
T  35128800 agtgta 35128795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 201
Target Start/End: Complemental strand, 32112849 - 32112725
Alignment:
Q  78 tttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataata 177  Q
    ||||||| ||| ||| |||| |||||  |||| |||||| || ||  || ||||||||||| | ||||||||||||||| |||||| |||||||||| ||    
T  32112849 tttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatta 32112750  T
Q  178 aagagagcgttc-aaagagagtgtt 201  Q
     |||||  |||| ||||||||||||    
T  32112749 gagagaatgttcaaaagagagtgtt 32112725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 12327362 - 12327299
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtg 116  Q
    ||||||||||| ||||| |||||| ||||||| || |||| |||||||||||||||| ||||||    
T  12327362 caacactctctctagcagtcactcttttattggatagaatcaatgtatgtcctaccattttgtg 12327299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 210
Target Start/End: Original strand, 1392630 - 1392808
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| ||| |||| |||||||| ||||||||||  |||||||  |  ||||||| ||| ||| ||||||||||  || |||||||  |  |||||| ||    
T  1392630 gaatgttagtaacactcactttttaacactctct--agcactctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttt 1392727  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
     ||| ||||  ||||||||||||||||||||||| ||||||| || || | || | |||| ||||||||||||| |||||||    
T  1392728 taaaatgtag-cccacaatgatttaaaccaataagagagtgagtattagatagggtgttcaaaagagagtgttgctagcatt 1392808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 2931576 - 2931657
Alignment:
Q  45 tcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||||| || || || || |||||||  ||| ||| |||||||||||||||| ||||||| | ||||||    
T  2931576 tcacttttcaacactctctctatcattcgcttatttatttgatgaaatcaatgtatgtcctaccattttgtggtggttcaat 2931657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 4595766 - 4595851
Alignment:
Q  54 aacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa 139  Q
    |||||||||| |||||||||||| |||||||| || ||| ||||||||||  |||||||| |  || ||| || ||||||||||||    
T  4595766 aacactctctctagcactcactcttttattgagtgaaatcaatgtatgtctcaccactttttatgggttccattttcaaagtgtaa 4595851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 19090209 - 19090266
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    ||||||||||||||||| || ||||| | |||||||| |||||||||||| |||||||    
T  19090209 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattg 19090266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 6531483 - 6531395
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    ||||||||||||||||||| || ||||| |  |||||||  ||||||||||| |||||||  || ||| ||||||||||| || |||||    
T  6531483 tagaggaatgctagcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgtatgtcccactacttt 6531395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 10060855 - 10060967
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| || ||||| |||||||| | || || |||||| ||||||   || ||| |||||||||||  ||||||| || || ||| |    
T  10060855 agaggaatgctagcaacactctcttttgaacactctttataacaatcactcttttattatgtgaaatcaatgtatgtcccgccactttatgtgggttcca 10060954  T
Q  126 tattcaaagtgta 138  Q
    | |||||||||||    
T  10060955 ttttcaaagtgta 10060967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 17226644 - 17226714
Alignment:
Q  147 atgatttaaaccaataaaagagtgaataataaagagagcgttca-aagagagtgttggtagcattgctcgt 216  Q
    ||||||| | |||||||||||||||||  ||||||||| ||||| |||||||||||| ||| ||| |||||    
T  17226644 atgatttcatccaataaaagagtgaatgctaaagagagtgttcagaagagagtgttgttagtattcctcgt 17226714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 12785071 - 12784986
Alignment:
Q  78 tttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||||  |||||| |||||||||| ||| ||||| ||    |||||| ||||||||||| | ||| ||||||||||||||||||    
T  12785071 tttattgggtggaatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataa 12784986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 27 - 210
Target Start/End: Original strand, 22189936 - 22190120
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||||||| |||| ||| ||||||||||||||| |||||||||||| ||||||| ||| ||| |||||||| || ||||||||||| || ||||||    
T  22189936 gaggaatgctagaaacactcatttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaat 22190035  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
     ||||||||||| |||| |||||||||||||||||||| |||||| || || |||| | |||| ||||||||||||| |||||||    
T  22190036 tttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagtattagagagggtgttcaaaagagagtgttgttagcatt 22190120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 27 - 192
Target Start/End: Original strand, 6442162 - 6442327
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||| || ||||| ||| ||||||||||||||| || |||||| |||||||||| ||| ||| ||||||||| | |||| ||||||||| ||||||    
T  6442162 gaggaatgttaacaacactcatttttcaacactctctctatcactcagtcatttattgtatgaaatcaatgtatgttccaccattttgtggggattcaat 6442261  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
     ||||||||||| |||||||||||||||||||||||||||||||| || |||||| || |||||||    
T  6442262 tttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtattaaagatagtgttcaaa 6442327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 11824072 - 11824250
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    |||| |||||||| ||| |||||||| |||||| |||||||||||| ||||||| ||| ||| ||||||||||| |||| ||||||  |||||||| |||    
T  11824072 aatgttagcaacactcatttttcaacgctctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttc 11824171  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    |||||||||||||||||||||||||| |||||| | ||||| || |  |||||| |||| ||||||||||||| |||||||    
T  11824172 aaagtgtaaacccacaatgatttaaatcaataagaaagtgagtatt--agagagtgttcaaaagagagtgttgttagcatt 11824250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 39254079 - 39254268
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||  ||| |||||||||   |||||||||||  | |||||    
T  39254079 agagaaatgctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaa 39254178  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctc 214  Q
    | || ||| |||| ||||||||| ||||||| |||||| ||||||| |  ||||||||| |||| ||||||| ||||| |||||||||||    
T  39254179 tttttaaaatgtagacccacaataatttaaatcaataagagagtgagtgttaaagagagtgttcaaaagagaatgttgttagcattgctc 39254268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 33008101 - 33008242
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||| |||||| ||| |||||||||||| ||||||| ||| ||| | ||||||||| ||||||||||| || ||| ||    
T  33008101 gaggaatgctagcaacactcacttttgaacactatctctagcactcactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctat 33008200  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
     | ||| ||||| |||||||||||||||||||||||||||||    
T  33008201 ttccaatgtgtagacccacaatgatttaaaccaataaaagag 33008242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 216
Target Start/End: Original strand, 27949268 - 27949460
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    |||||||| |||| ||||| |||||||| |||||||||| || ||||||||| | ||||| ||| ||| ||  |||||||||||| |||||| |  ||||    
T  27949268 tagaggaaagctaacaacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttca 27949367  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctcgt 216  Q
    |  ||||||||||| |||||||||||||||||| ||||| ||||||| || || |||||| |||| ||||||||||||| ||||||| |||||    
T  27949368 aatttcaaagtgtagacccacaatgatttaaactaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagcatttctcgt 27949460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 31502648 - 31502504
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| ||||||||||||| ||||| || ||||||||| ||||||| ||| ||| || |||||||| |||| |||||| |  |||||    
T  31502648 agaggaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaa 31502549  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
    | ||||||||||| || ||||||||||||||||||||| ||||||    
T  31502548 ttttcaaagtgtagactcacaatgatttaaaccaataagagagtg 31502504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 210
Target Start/End: Original strand, 46517293 - 46517472
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| |||||||| ||||||||||  ||||||||||||||||||| ||  ||| ||||||| ||| |||| | ||||||| |||||| ||    
T  46517293 gaatgctagcaacactcactttttaacactctct--agcactcactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaatttt 46517390  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    ||||||||| || ||||||||||||||||||||| ||| ||| || || ||||   |||| ||||||||||||| |||||||    
T  46517391 caaagtgtagactcacaatgatttaaaccaataagagaatgagtattagagaggctgttcaaaagagagtgttgctagcatt 46517472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 27888278 - 27888463
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| |||||||| | |||||||| || ||||||| |  | |||| ||  ||| ||||||||||| ||||||||||| || |||||    
T  27888278 agaggaatgctagcaacactcacttttgagcactctctctaacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaa 27888377  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    | || |||||||| |||||||||||||||||||||||| ||||||| |  || |||||| | || ||||||||||||| |||||||    
T  27888378 tttttaaagtgtagacccacaatgatttaaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgttgctagcatt 27888463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 210
Target Start/End: Original strand, 7775010 - 7775180
Alignment:
Q  40 aacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa 139  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||| ||| ||| ||||||||||| ||||||||||| |  |||||| ||||||||||      
T  7775010 aacatccatttttcaacactctctatagcactcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgg 7775109  T
Q  140 acccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    | ||| |||||||||||| |||||  ||||||||| || |||||| |||| ||||||| ||||| |||||||    
T  7775110 a-ccagaatgatttaaacaaataagtgagtgaatattagagagagtgttcaaaagagaatgttgttagcatt 7775180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 12263619 - 12263462
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||| |||||||||| | ||||||||||||||||| || ||  ||||| ||||| | ||||||| ||||||||||| | |||||||||  |  |||||    
T  12263619 gaggaacgctagcaacacttacttttcaacactctctctatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaat 12263520  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
     ||||||||||| |||||||||||||||||||||||| | ||||| || || ||||||    
T  12263519 tttcaaagtgtagacccacaatgatttaaaccaataagatagtgagtattagagagag 12263462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 48374618 - 48374440
Alignment:
Q  29 ggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatat 128  Q
    ||||||||||||||| |||||||| ||||||||||  || |||||||| |||||||||||||||  ||| |||||| |||||||| |  || ||| || |    
T  48374618 ggaatgctagcaacactcacttttgaacactctct--agtactcactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctattt 48374521  T
Q  129 tcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
     ||||||||| || |||||| ||||||||||| || ||||||| || || |||||| |||| ||||||||||||| |||||    
T  48374520 ccaaagtgtatactcacaataatttaaaccaacaagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 48374440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 210
Target Start/End: Original strand, 14795131 - 14795310
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| ||||||||||||||||||| || || |||||  ||||||| ||| ||| ||||||||||| |||| ||| ||  | |||||| ||    
T  14795131 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 14795230  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagcatt 210  Q
     |||||||| | ||| |||||||||||| ||||| ||||||| ||  | |||||| ||||||| ||||||||| |||||||    
T  14795231 taaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgttcaaa-agagtgttgctagcatt 14795310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 210
Target Start/End: Original strand, 15242123 - 15242302
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| ||||||||||||||||||| || || |||||  ||||||| ||| ||| ||||||||||| |||| ||| ||  | |||||| ||    
T  15242123 gaatgctagcaacactcacttttcaacactctctctatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaatttt 15242222  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagcatt 210  Q
     |||||||| | ||| |||||||||||| ||||| ||||||| ||  | |||||| ||||||| ||||||||| |||||||    
T  15242223 taaagtgtatatccataatgatttaaactaataagagagtgagtataagagagagtgttcaaa-agagtgttgctagcatt 15242302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 163
Target Start/End: Complemental strand, 36845701 - 36845569
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| |||||||||||| ||||||||||| |||||| | ||||||| ||||||||||| ||| ||| ||| ||  |||| |||||| || |||||| ||    
T  36845701 gaatgttagcaacattcatttttcaacactttctttatcgctcactcttttattgaatgaaatcaatatat-tctcaccaatttgtgtgggttcaatttt 36845603  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||| || ||||||||||||||||||||||||    
T  36845602 caaagtatagacccacaatgatttaaaccaataa 36845569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 32205075 - 32205217
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| |||||||| |||||||||| ||   ||||||| ||||||| ||| ||| |||||||||||||||| |||||| || |||||    
T  32205075 agaggaatgctagcaacactcacttttgaacactctctcta---ctcactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaa 32205171  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    | || ||||| ||   | |||||||||||||| ||||| |||||||    
T  32205172 tttttaaagtataggtctacaatgatttaaactaataagagagtga 32205217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 202
Target Start/End: Original strand, 11692220 - 11692352
Alignment:
Q  71 tcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
    |||||| ||||||| ||| ||| |||||||||||||||||||||||  | |||||| |||||||||||||| |||| |||||||||| ||||  ||||||    
T  11692220 tcactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtg 11692319  T
Q  171 aataataaagagagcgttc-aaagagagtgttg 202  Q
    | || || |||| | |||| |||||||||||||    
T  11692320 agtattagagagtgtgttcaaaagagagtgttg 11692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 25092840 - 25092706
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||| ||||| ||||||||||||||||||||  |||| ||||| || |||  ||| ||| |||||||||||||| |||||||| |  |||||| |||    
T  25092840 aatgctaacaacactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttc 25092741  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
     |||| || || |||||| ||||||||||||||||    
T  25092740 taagtatagacacacaataatttaaaccaataaaa 25092706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 19423014 - 19422873
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| |||||||| ||||||||||||||||||| || ||||||||| || |||| ||| ||| ||||||||||| ||| | ||||   |   | || ||    
T  19423014 gaatgttagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactatttt 19422915  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    | ||||||| | ||||||||||||||||||||||||||||||    
T  19422914 cgaagtgtagatccacaatgatttaaaccaataaaagagtga 19422873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 207
Target Start/End: Complemental strand, 32213054 - 32212872
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    |||| ||||||||| |||| |||||||| |||||||||| ||||||||  || ||||||| ||| ||| ||||||||||  || |||||||  |  ||||    
T  32213054 tagaagaatgctagtaacactcactttttaacactctctctagcactctatcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttca 32212955  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagc 207  Q
    || || ||| ||||  ||||||||||||||||||||||| ||||||| || || | || | |||| ||||||||||||| ||||    
T  32212954 atttttaaaatgtag-cccacaatgatttaaaccaataagagagtgagtattatatagggtgttcaaaagagagtgttgctagc 32212872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 13919781 - 13919962
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||| || ||||| | |||||||| |||||||| |||||||||||  || ||| ||||||||||| |||||||| || || ||| || |||    
T  13919781 aatgctagcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttc 13919880  T
Q  131 aaagtgta-aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    ||||||||   || ||| |||||| | |||||||| |||||| |  || |||||| | || ||||||||||||| |||||||    
T  13919881 aaagtgtaggtcctacattgatttcacccaataaatgagtgagtgctagagagagtgctcaaaagagagtgttgctagcatt 13919962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 209
Target Start/End: Complemental strand, 6580188 - 6580002
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatgg---aataaatgtatgtcctaccactttgtggggcttc 123  Q
    |||||||| |||||||| ||||||||||||||||| | | |||||||||  ||| ||   |||   | | ||||||||||  || ||||||||  | |||    
T  6580188 gaggaatggtagcaacactcacttttcaacactctttcttgcactcactttttttttttttggtggattcaatgtatgtctcactactttgtgtaggttc 6580089  T
Q  124 aatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcat 209  Q
    ||| |||||| | |  ||||||||| |||||||||||||| ||||||| || || |||||| |||| ||||||||||||||||||||    
T  6580088 aattttcaaaatatggacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttggtagcat 6580002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 202
Target Start/End: Complemental strand, 25428659 - 25428485
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| || ||||| | |||||| ||||| |||||||| |||||||  || ||| ||||||||||| |||||||| || || ||  || |     
T  25428659 gaatgctagcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttc 25428560  T
Q  130 caaagtgta-aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttg 202  Q
    ||||||||| | || ||| |||||| | ||||||||||||||| |  ||||||||| | || |||||||||||||    
T  25428559 caaagtgtagatcctacattgattttatccaataaaagagtgagtgctaaagagagtgctcaaaagagagtgttg 25428485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 32178981 - 32178843
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||||||| || |||||||||||||||||||||  |||||| |||  ||||||| ||| ||| ||||||||| | |||||| |||     |||||| ||    
T  32178981 gaatgctagtaaaattcacttttcaacactctct--agcacttactattttattggatgaaattaatgtatgttccaccactctgtttta-ttcaatttt 32178885  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    ||||||||| || |||||||||||||| |||||| |||||||    
T  32178884 caaagtgtatacacacaatgatttaaatcaataagagagtga 32178843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 25686951 - 25686882
Alignment:
Q  94 aatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||||||| ||||||||| |  || |||||| ||||||||||| ||||||||||||||||||||||||    
T  25686951 aatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataa 25686882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 12270985 - 12271093
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||||||||||||  |||||||||||||||||| |||||  ||||| |||||   ||| ||| ||||||||||| ||||||||||| || ||| ||    
T  12270985 gaggaatgctagcaaca--cacttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgtgg-ttctat 12271081  T
Q  127 attcaaagtgta 138  Q
     |||||||||||    
T  12271082 tttcaaagtgta 12271093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 13919969 - 13919909
Alignment:
Q  24 atagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||||||||||||||||| || ||||| | |||||||| ||||||||||||||||||||    
T  13919969 atagaggaatgctagcaacactctcttttgagcactctctctagcactcactcatttattg 13919909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 44350891 - 44350801
Alignment:
Q  121 ttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    |||||| ||||||||||| || |||||||||||||||||| |||||||||| || || |||  | |||| ||||||||||||| |||||||    
T  44350891 ttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaagagtgagtattagagatggtgttcaaaagagagtgttgttagcatt 44350801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 192
Target Start/End: Complemental strand, 10934148 - 10933983
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||  ||||| |||  ||| |||||||||| ||  | ||| || ||||||| ||  ||| ||| ||||||  ||||||||||  || ||| ||    
T  10934148 gaggaatgctttcaacactcatgttttaacactctctctattattcattcttttattggataaaattaatatatgtctcaccactttgtatggtttctat 10934049  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
     | |||||| ||||||||||||||||||||| ||||| ||| ||| || |||| ||||||||||||    
T  10934048 ttccaaagtataaacccacaatgatttaaactaataagagattgagtattaaaaagagcgttcaaa 10933983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 17354712 - 17354599
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||||||||| ||  |||| | |||||||| || |||||| || ||||||| ||| ||| ||||||||||| |||||||| || || |||     
T  17354712 tagaggaatgctagcaacactcttttttgagcactctctctaacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttct 17354613  T
Q  125 atattcaaagtgta 138  Q
    || | |||||||||    
T  17354612 atttccaaagtgta 17354599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 27320226 - 27320282
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaat 87  Q
    ||||||||||||||||| |||||||||||||||  | ||||||||| ||||||||||    
T  27320226 aatgctagcaacattcatttttcaacactctctccaacactcactcttttattgaat 27320282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 32605328 - 32605482
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||| |||| |||||||| |  |||||||||||||| ||||||||||| || |||| || ||| ||| ||||||||||  |  |||||||| || |||||    
T  32605328 agagaaatgttagcaacacttgcttttcaacactctttttagcactcattctttta-tggatgaaatcaatgtatgtctcattactttgtgtggattcaa 32605426  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaaga 181  Q
    | || ||||||||  | ||||||||||||||  ||||| || || |||| ||||||    
T  32605427 tttttaaagtgtaggctcacaatgatttaaattaataagagggtaaatattaaaga 32605482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 2520774 - 2520716
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||||||||||||||| || |||||||||||||||  || ||||||| |||||||||    
T  2520774 agaggaatgctagcaacactctcttttcaacactctcactatcactcacacatttattg 2520716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 8073471 - 8073382
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtg 116  Q
    ||||||| |||| |||| ||| ||||||||| |||   |||||||||||| ||||| | ||| ||| ||||||||||| |||||||||||    
T  8073471 gaggaatactagtaacactcatttttcaacattcttcctagcactcactcttttatcggatgaaatcaatgtatgtcccaccactttgtg 8073382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 9111516 - 9111431
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||||||| || |||||||| |||| |||||||| ||||||| |||||| ||||||  ||| ||| ||| ||| ||||||||||||    
T  9111516 aggaatgcaagtaacattcattttttaacactctatttagcattcactcttttattagatgaaatcaatctatatcctaccacttt 9111431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 44511112 - 44511043
Alignment:
Q  34 gctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtc 103  Q
    |||| ||||| | ||||||||||||||||| |||||||||||  ||||||| ||| ||| ||||||||||    
T  44511112 gctaacaacacttacttttcaacactctctctagcactcacttttttattggatgaaatcaatgtatgtc 44511043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 9648918 - 9649057
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaata--aatgtatgtcctaccactttgtggggcttc 123  Q
    |||||||||||||| | | ||| |||| || ||||||| |||||||||||  || |||| ||  || |  ||||||||| | ||||||||||| || |||    
T  9648918 agaggaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggttc 9649017  T
Q  124 aatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
      | | ||| ||||| ||||||||||||||||||||||||    
T  9649018 tgtttccaatgtgtatacccacaatgatttaaaccaataa 9649057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 42863617 - 42863569
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcact 75  Q
    ||||||||||||||||| |||||||| |||||||||| || ||||||||    
T  42863617 gaggaatgctagcaacactcacttttaaacactctctctaacactcact 42863569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 174
Target Start/End: Complemental strand, 36845566 - 36845527
Alignment:
Q  135 tgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtgaata 36845527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 39254269 - 39254210
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattga 85  Q
    |||| ||||||| |||||||| ||||| ||||||||||||| |||||||||  |||||||    
T  39254269 agagcaatgctaacaacattctcttttgaacactctctttaacactcactctcttattga 39254210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 7459455 - 7459497
Alignment:
Q  142 ccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    ||||||| |||||||||||||||||||||| || |||||||||    
T  7459455 ccacaataatttaaaccaataaaagagtgagtattaaagagag 7459497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 7774956 - 7775006
Alignment:
Q  142 ccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    |||||||||||||||||||||| ||||| |||| || |||||| |||||||    
T  7774956 ccacaatgatttaaaccaataagagagtaaatattagagagagtgttcaaa 7775006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 19494521 - 19494411
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    ||||||||||||| || || ||||| |  ||| ||| ||| |||||||| |||||||  || ||| ||||||||||| |||||||| || || ||| ||     
T  19494521 aggaatgctagcagcactctcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatt 19494422  T
Q  128 ttcaaagtgta 138  Q
    |||||||||||    
T  19494421 ttcaaagtgta 19494411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 22786149 - 22786259
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    |||||||||||||||| || ||||| | |||||||| |||||||||||  ||||||   || ||| ||||||||||  |||||||| || || ||| ||     
T  22786149 aggaatgctagcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgtatgtctcaccactttatgtgggttccatt 22786248  T
Q  128 ttcaaagtgta 138  Q
    | |||||||||    
T  22786249 tccaaagtgta 22786259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 25428472 - 25428530
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||| |||| |||||||| || ||||| | ||||||||||||||||||||| |||||||    
T  25428472 agagaaatgatagcaacactctcttttgagcactctctttagcactcactcttttattg 25428530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 26703436 - 26703506
Alignment:
Q  29 ggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    ||||||||||||||| || ||| | | |||||||| |||||||||||| |||||||  || ||||||||||    
T  26703436 ggaatgctagcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgta 26703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 3855899 - 3855842
Alignment:
Q  121 ttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataa 178  Q
    |||||| ||||||||  | ||| ||||||||||||||||||||||||||  |||||||    
T  3855899 ttcaattttcaaagttcagacctacaatgatttaaaccaataaaagagtatataataa 3855842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 19840879 - 19840936
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    ||||||||||||||||| ||  |||| | |||||||| |||||||||||| |||||||    
T  19840879 gaggaatgctagcaacactctattttgagcactctctctagcactcactcttttattg 19840936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 100
Target Start/End: Complemental strand, 31960036 - 31959967
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtat 100  Q
    ||||||| ||||| || ||||| | |||||||| ||||||||||| |||||||| ||| ||| |||||||    
T  31960036 aatgctaacaacactctcttttgagcactctctctagcactcacttatttattggatgaaattaatgtat 31959967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 12167317 - 12167361
Alignment:
Q  140 acccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    |||||||||||||||||||||||| | ||||| || |||||||||    
T  12167317 acccacaatgatttaaaccaataagaaagtgagtattaaagagag 12167361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 14759829 - 14759757
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    ||||||||||||||||| || ||||| | |||||||  |||||| ||||| ||||||| ||| ||| ||||||    
T  14759829 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 14759757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 17813847 - 17813799
Alignment:
Q  144 acaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    |||||||||||||||||||||||| | |||  ||||||||| |||||||    
T  17813847 acaatgatttaaaccaataaaagaataaatgttaaagagagtgttcaaa 17813799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 26703622 - 26703537
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||||||||||||||||| ||  |||| | || ||||| |||||||||||| |||||||  || ||| ||||||||||  ||||||||    
T  26703622 agaggaatgctagcaacactc--ttttgagcattctctctagcactcactcttttattgggtgaaatcaatgtatgtctcaccacttt 26703537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 27888470 - 27888418
Alignment:
Q  24 atagaggaatgctagcaacattcacttttcaacactctctttagcactcactc 76  Q
    |||||||||||||||||||| || ||||| | |||||||| || |||||||||    
T  27888470 atagaggaatgctagcaacactctcttttgagcactctctctaacactcactc 27888418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 30742719 - 30742683
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctc 62  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  30742719 agaggaatgctagcaacattcacttttgaacattctc 30742683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 224
Target Start/End: Complemental strand, 26767944 - 26767746
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||| |||| |||| || ||| ||| ||||||||||| ||||||||||| || ||||||    
T  26767944 gaggaatgctagcaacactcacttttcaacattctctctagcacttactcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaat 26767845  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctcgtgtgcatat 224  Q
     |||||| |||| || ||||||||||||||||||||||||||||| || || | |||| |||| ||||| ||||||| ||||||| ||| |||| ||||    
T  26767844 tttcaaattgtagactcacaatgatttaaaccaataaaagagtgagtattagatagagtgttcaaaagaaagtgttgctagcattactcttgtgtatat 26767746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 12989188 - 12989370
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||| || |||| ||| ||| ||||||||||| ||||||||||  || ||| ||    
T  12989188 gaggaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctat 12989287  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
     | | ||||||| |||||||||||||||||||||||| ||||||| || || |||||| |||| ||||||||||||| |||||    
T  12989288 ttccgaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttgctagca 12989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 6980299 - 6980127
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||| || |||||| ||||||||||||| |  |||||| |||    
T  6980299 aatgctagcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttc 6980200  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttg 202  Q
    ||||| || |||||||||||||| ||| ||||| ||||||| || || ||| || |||| |||||||||||||    
T  6980199 aaagtatagacccacaatgatttcaactaataagagagtgagtattagagaaagtgttcaaaagagagtgttg 6980127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 9470077 - 9470225
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||| ||||||||||| | ||| |||||||| |||||| || ||||||||| ||||||| ||| ||| ||||||||||| ||||||||||  || |||||    
T  9470077 agagaaatgctagcaatactcatttttcaacgctctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaa 9470176  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    | ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  9470177 ttttcaaagtgtagacccacaatgatttaaaccaataagagagtgaata 9470225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 202
Target Start/End: Original strand, 45554567 - 45554732
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| ||| ||| ||||||||||| |||||||||        |||| ||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcactcactcttttattggatgaaatcaatgtatgtcccaccactttg--------caatttt 45554658  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttg 202  Q
    | ||||||| |||||||||||||||||||||||| | ||||| || || |||||  |||| |||||||||||||    
T  45554659 ccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagaatgttcaaaagagagtgttg 45554732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 10981514 - 10981695
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||| || ||| | |||||||| |||||||||| || ||||||||  | ||||||||| || |||||||||||| ||||||||||| || ||| |    
T  10981514 agaggaatgataacaaaactcacttttgaacactctctctaacactcacttttctattgaatgaaaaaaatgtatgtcccaccactttgtgtgggttcta 10981613  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagca 208  Q
    | | ||| ||||| |||||||||||||||||||||||| ||||||| || || || ||| ||||  ||||||||||| |||||    
T  10981614 tttccaatgtgtagacccacaatgatttaaaccaataagagagtgagtattagagggagtgttc-tagagagtgttgctagca 10981695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 38464161 - 38464342
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    ||||||||||  |||||||||||||||||||||||| |  || | |||  ||||||| ||| ||| ||||||||||  | ||||||| | || ||||||     
T  38464161 aggaatgctaagaacattcacttttcaacactctctctgacaattacttttttattgtatgaaatcaatgtatgtctcatcactttgcgtgggttcaatt 38464260  T
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
    ||||||||||| |||||||||||||||||||||||| ||||| | || || |||||| |||| ||||||||| ||| |||||    
T  38464261 ttcaaagtgtagacccacaatgatttaaaccaataagagagtaagtattagagagagtgttcaaaagagagtattgctagca 38464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 36472021 - 36471864
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||| ||| |||| ||||||||||||||||||| |  |||||| ||  |||||| ||| ||| || |||||||  |||||||| |  || ||||||    
T  36472021 gaggaatgatagtaacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaat 36471922  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
     |||||| ||||||| ||||||||||||||||||||||||||||| || || ||||||    
T  36471921 tttcaaaatgtaaactcacaatgatttaaaccaataaaagagtgagtattagagagag 36471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 44274231 - 44274375
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||| ||||||||||||| |||||||  | |||||||| || || |||||| || |||| ||  ||| ||||||||||| ||||||||||| || |||||    
T  44274231 agagaaatgctagcaacactcactttg-agcactctctctaacattcactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaa 44274329  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
      ||||||||||| | |||||||||||||||||||||| |||||||    
T  44274330 ctttcaaagtgtagatccacaatgatttaaaccaataacagagtga 44274375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 18511392 - 18511256
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||| |||||||||  || ||||||||| ||||||| ||  ||| ||||||||||| || | ||| || || ||||||    
T  18511392 gaggaatgctagcaacactcactttttaacactctcactatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaat 18511293  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
     ||||||||| | ||| |||||| |||||||||||||    
T  18511292 tttcaaagtgaagacctacaatgttttaaaccaataa 18511256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 3804585 - 3804720
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcct-accactttgtggggcttcaatatt 129  Q
    ||||||||| ||| |||||||||||||||||||||| || |||||| ||||||| ||| ||| |||||||||||  | |||||| ||  | || ||| ||    
T  3804585 aatgctagctacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatgtccccatcactttatgtaggtttaatttt 3804684  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
    ||||||||| ||||||||| |||||||  |||||||    
T  3804685 caaagtgtacacccacaataatttaaattaataaaa 3804720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 16719609 - 16719478
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||| ||||||||||||||| ||||||||||  |||| ||||||  ||| ||| ||||||| ||| |||| ||  ||  | |||||| |||    
T  16719609 aatgctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttc 16719510  T
Q  131 aaagtgtaaacccacaatgatttaaaccaata 162  Q
    ||| |||| |||| ||||||||||||||||||    
T  16719509 aaaatgtagacccgcaatgatttaaaccaata 16719478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 181
Target Start/End: Complemental strand, 34142319 - 34142168
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| |||||||| | ||||||||||| |||||  | || |||||  ||||||| ||| |||  |||||||||  || |||||||| || |||||| ||    
T  34142319 gaatgttagcaacacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaatttt 34142220  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaaga 181  Q
    ||||||||| |  ||||||| ||||||||||||| |||||||||| ||||||    
T  34142219 caaagtgtagagtcacaatggtttaaaccaataagagagtgaatattaaaga 34142168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 28898220 - 28898035
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| ||  |||| | |||||||| |||||||||||| |||||||  || ||| ||||||||||| |||||||| || || ||  ||    
T  28898220 gaggaatgctagcaacactcttttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcat 28898121  T
Q  127 attcaaagtgta-aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
     | ||||||||| | || ||| |||||| | ||||||||||||||| |  |||||||||   || ||||||||||||| |||||||    
T  28898120 ttccaaagtgtagatcctacattgatttcatccaataaaagagtgagtgctaaagagagtactcaaaagagagtgttgctagcatt 28898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 179
Target Start/End: Complemental strand, 25730602 - 25730470
Alignment:
Q  47 acttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccaca 146  Q
    |||||| |||||||| | || ||||||||  ||||||| |||||||| |||||||||  ||||  || || || ||| || || || |||||||| ||||    
T  25730602 acttttgaacactctttctaacactcacttttttattggatggaatacatgtatgtctcaccatattatgtgggttctatttttaacgtgtaaactcaca 25730503  T
Q  147 atgatttaaaccaataaaagagtgaataataaa 179  Q
     ||||||||||||||||||||||||||| ||||    
T  25730502 gtgatttaaaccaataaaagagtgaatattaaa 25730470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 169
Target Start/End: Complemental strand, 7919382 - 7919311
Alignment:
Q  98 tatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagt 169  Q
    ||||||| ||||||||||| || |||||| ||||||||||| | |||||||||||||||||||||| |||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 42182883 - 42182997
Alignment:
Q  24 atagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttc 123  Q
    ||||| |||||||||||||| || ||||| | |||||||| |||||||||||| |||||||  || ||| ||||||||||| |||||||| || || |||    
T  42182883 atagatgaatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttc 42182982  T
Q  124 aatattcaaagtgta 138  Q
     || | |||||||||    
T  42182983 catttccaaagtgta 42182997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 11539420 - 11539580
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaat--aaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||| ||||| ||| |||| |||||||| | |||||||||||| ||||||| ||| |||  | |||||||| | | ||||||||| |  |||     
T  11539420 gaggaatgctaacaacactcatttttgaacactctttctagcactcactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttct 11539519  T
Q  125 atattcaaagtgtaaacccacaa-tgatttaaaccaataaaagagtgaataataaagagag 184  Q
    || ||||||||||| | ||| || |||||||||||||||| ||||||| || || ||||||    
T  11539520 attttcaaagtgtagatccagaattgatttaaaccaataagagagtgagtattagagagag 11539580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 184
Target Start/End: Complemental strand, 30718497 - 30718353
Alignment:
Q  39 caacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgta 138  Q
    ||||| ||| |||| |||| ||||| ||| |||||||| ||||||| ||| |||  || ||||||| | || |||||| || ||  || |||||||||||    
T  30718497 caacactcaattttaaacattctctctagtactcactcttttattggatgaaatcgatatatgtcc-atcattttgtgtggattgtattttcaaagtgta 30718399  T
Q  139 aacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
     || ||||||||||||||||||||||| |||||||| || ||||||    
T  30718398 gactcacaatgatttaaaccaataaaaaagtgaatattagagagag 30718353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 182
Target Start/End: Complemental strand, 12099050 - 12098894
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||| |||||||| || |||||||||  ||||||||||| || ||  ||||||  ||| ||| || |||||||   |||||||||  |  ||||||    
T  12099050 gaggaatgttagcaacactctcttttcaactttctctttagcattcgctattttatttgatgaaatcaaagtatgtctcgccactttgtatgagttcaat 12098951  T
Q  127 attcaaagtgtaaacccac-aatgatttaaaccaataaaagagtgaataataaagag 182  Q
     |||||||||||||| ||| |||||||||||| ||||| ||||||| || |||||||    
T  12098950 tttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtattaaagag 12098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 4964856 - 4964745
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||||||||||||||| ||||| |  ||||||| |||||||||||  |||||||  || ||| ||||||||||| |||||||| || || ||  ||    
T  4964856 gaggaatgctagcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtggatttcat 4964757  T
Q  127 attcaaagtgta 138  Q
     |||||||||||    
T  4964756 tttcaaagtgta 4964745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 17188064 - 17188200
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||| || ||||| |||||||||||| |||||| |  ||||||||  ||||||| ||| ||| ||||| | ||  ||||||||||| |   |||||    
T  17188064 gaggaatgttaccaacactcacttttcaactctctctat--cactcactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaat 17188161  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
     |||||||||||  |||| ||||||||||||||||||||    
T  17188162 tttcaaagtgtaggcccagaatgatttaaaccaataaaa 17188200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 19639090 - 19639237
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||| || |  |||||||| ||||||||||  |||| |||||  ||||||  ||| ||| ||||||||||  | ||| | ||| |  ||||||    
T  19639090 gaggaatgctaacagcgctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaat 19639189  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
     ||||||||| | ||| |||||||||||||||||||| ||||||||||    
T  19639190 tttcaaagtgcagacctacaatgatttaaaccaataagagagtgaata 19639237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 19837683 - 19837830
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||| || |  |||||||| ||||||||||  |||| |||||  ||||||  ||| ||| ||||||||||  | ||| | ||| |  ||||||    
T  19837683 gaggaatgctaacagcgctcactttttaacactctctccagcattcactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaat 19837782  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
     ||||||||| | ||| |||||||||||||||||||| ||||||||||    
T  19837783 tttcaaagtgcagacctacaatgatttaaaccaataagagagtgaata 19837830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 174
Target Start/End: Complemental strand, 37652420 - 37652281
Alignment:
Q  35 ctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaag 134  Q
    ||||||||| |||| |||||||||| | ||||||||| |||  ||||||  ||| ||| ||||||||| | ||| |||||||    |||||| | ||| |    
T  37652420 ctagcaacactcacatttcaacactttttttagcacttacttttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacg 37652321  T
Q  135 tgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    |||| |  ||||||||||||||||||||||| ||||||||    
T  37652320 tgtagattcacaatgatttaaaccaataaaaaagtgaata 37652281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 31395628 - 31395542
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||||||| |||||||| || ||||| | ||||||||||||||||||||| |||||||  || ||| |||||||||||  |||||||    
T  31395628 gaggaatgttagcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgtatgtccctccacttt 31395542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 32701467 - 32701605
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||||||| | |||||| ||||||||||| | |||||||   |||| ||||||| ||  ||| ||||||| ||| |||||||| ||    ||||||    
T  32701467 gaggaatgctagtatcattcatttttcaacactttttttagcaactactcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaat 32701566  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
     || || ||||||| ||| ||||||||||||||||||||    
T  32701567 ttttaacgtgtaaatccataatgatttaaaccaataaaa 32701605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 37719830 - 37719903
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    ||||||||||||||||||||| ||||| | |||||| | |||||||||||| ||||||| ||| ||| ||||||    
T  37719830 agaggaatgctagcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgta 37719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 41805962 - 41805873
Alignment:
Q  24 atagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||||||||||||||||||| ||  ||||  ||||| |||||| ||||||||| ||||||| ||  ||| ||||||||||| ||||||||    
T  41805962 atagaggaatgctagcaacactctattttggacactttctttaacactcactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 1110194 - 1110342
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| || ||||  | || ||||| || ||||||||| |||||||| || ||| ||||||||||| |||||||| || || ||| |    
T  1110194 agaggaatgctagcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgtatgtcccaccactttatgtgggttcca 1110293  T
Q  126 tattcaaagtgta-aacccacaatgatttaaaccaataaaagagtgaat 173  Q
    | | |||||| ||   || ||| |||||| | |||||||||||||||||    
T  1110294 tttccaaagtatatgtcctacattgatttcacccaataaaagagtgaat 1110342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 15884498 - 15884562
Alignment:
Q  99 atgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||| ||||||||||| || |||||| |||||| |||| ||||||||| ||||||||||||||    
T  15884498 atgtcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataa 15884562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 33678298 - 33678152
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||| |||||||| | || |||| | || || |||||||| ||| |||||||| || |||||  || | || ||| ||    
T  33678298 gaggaatgctagcaacactcacttttgaacactctttataacacttattctttaattgaatgaaatcaatgtatgcccaaccac-atgcgtgggttctat 33678200  T
Q  127 attcaaa-gtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
     |||||| ||||| || |||||| |||||||||||||||| ||||||||    
T  33678199 -ttcaaatgtgtagactcacaataatttaaaccaataaaaaagtgaata 33678152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 15508911 - 15509022
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||| |||||||| || ||||| |||||||| | || ||||||||| |||||||| || ||| ||||||||||| |||| ||| || || ||| ||    
T  15508911 gaggaatgttagcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgtatgtcccaccattttttgtgggttccat 15509010  T
Q  127 attcaaagtgta 138  Q
     | |||||||||    
T  15509011 ttccaaagtgta 15509022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 45270735 - 45270601
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||| ||||||||||||||||||| | ||| || |||| |||  ||||||| ||  ||| |||||||||   || | |||||| |  ||| || ||    
T  45270735 gaatgctatcaacattcacttttcaacattttctctaacact-acttttttattggataaaattaatgtatgtatcactattttgtgtgaattcgatttt 45270637  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
     ||||||||||| |||||||||||||||||||||||    
T  45270636 gaaagtgtaaactcacaatgatttaaaccaataaaa 45270601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 28898034 - 28898103
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    |||||||||||||| || ||||| |  |||||||||||||||||||| ||||||| ||| ||| ||||||    
T  28898034 gaatgctagcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgta 28898103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 202
Target Start/End: Complemental strand, 36094064 - 36093993
Alignment:
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttg 202  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||  || ||| || ||| |||||||||||||    
T  36094064 caaattgtaaatccacattgatttaaaccaataaaagagtgaatgttagagaaagtgtt-aaagagagtgttg 36093993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 2476532 - 2476664
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||  |||| ||||||||||||| ||||  ||||||| |||| ||||||  ||  ||| ||||||||||| || ||||||||   ||||||    
T  2476532 agaggaatgctactaacactcacttttcaacattctc--tagcacttactcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaa 2476629  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaa 160  Q
    | |||||| |||| ||  | |||||||||| ||||    
T  2476630 ttttcaaaatgtagacttataatgatttaatccaa 2476664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 4552922 - 4552879
Alignment:
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||    
T  4552922 ttcaatgtgtagacccacaatgatttaaaccaataagagagtga 4552879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 25238359 - 25238316
Alignment:
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    ||||||||||| | |||||||||||||||||||||||| |||||    
T  25238359 ttcaaagtgtagatccacaatgatttaaaccaataaaaaagtga 25238316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 37228499 - 37228582
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatg-gaataaatgtatgtcctaccacttt 113  Q
    ||||||||||||| || ||||| | |||||||| |||||||||||| |||||||  ||  ||| ||||||||||| ||||||||    
T  37228499 aatgctagcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaaattaatgtatgtcccaccacttt 37228582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 1107039 - 1107121
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||| |||||||| || ||||| | |||||||| |||||| ||||| |||||||  || ||| ||||||||||| ||||||||    
T  1107039 aatgttagcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgtatgtcccaccacttt 1107121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 35316542 - 35316440
Alignment:
Q  69 actcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
    |||||||| ||||||  ||  ||| ||||||||||| |||| ||| ||  | |||||| || ||| |||| ||||||||||||||||| |||||| ||||    
T  35316542 actcactcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtagacccacaatgatttaaatcaataagagag 35316443  T
Q  169 tga 171  Q
    |||    
T  35316442 tga 35316440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 40899709 - 40899742
Alignment:
Q  143 cacaatgatttaaaccaataaaagagtgaataat 176  Q
    |||||||||||||||||||||| |||||||||||    
T  40899709 cacaatgatttaaaccaataaatgagtgaataat 40899742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 4603046 - 4602962
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgt 115  Q
    |||| |||||||| |||||||||||| ||| |||| | |||||||| ||||||| ||| ||| ||| ||||| | | ||||||||    
T  4603046 aatgttagcaacactcacttttcaacgctccctttggtactcactcttttattggatgaaatcaatatatgttccatcactttgt 4602962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 19193497 - 19193533
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctct 63  Q
    ||||||||||||||||| || ||||||||||||||||    
T  19193497 gaggaatgctagcaacactctcttttcaacactctct 19193533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 210
Target Start/End: Original strand, 43771126 - 43771307
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||| |||||||| |||||||| |||||||||| ||  |||||||| ||||||| ||| ||| ||||||||||| |||||| |||| || |||||| ||    
T  43771126 gaatggtagcaacactcacttttgaacactctctctatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaatttt 43771225  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    ||||||||| |||||||||||||||||||||||| ||||||| || ||||||| | |||| |||||||| |||| |||||||    
T  43771226 caaagtgtagacccacaatgatttaaaccaataagagagtgagtattaaagagggtgttcaaaagagagcgttgctagcatt 43771307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 210
Target Start/End: Original strand, 8108957 - 8109137
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||  || ||| ||||||||||| || | ||||||    |||||| |||    
T  8108957 aatgctagcaacactcacttttcaacactctctctagcactcactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttc 8109056  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    |||||||| |||||||||||||||||||||||| | ||||| || || |||||| |||| ||||||||||||| |||||||    
T  8109057 aaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgttgctagcatt 8109137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 27 - 210
Target Start/End: Original strand, 39471154 - 39471338
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||| || |||||||||| |||  |||| ||||||  ||| ||| ||||||||||| |||||||||||  | ||||||    
T  39471154 gaggaatgctagcaacactcacttttaaatactctctttaacaccaactcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaat 39471253  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcg-ttcaaagagagtgttggtagcatt 210  Q
     ||||||||||| |||||||||||||||||||||||| ||||||| || || |||||  | || ||||||||||||| |||||||    
T  39471254 cttcaaagtgtagacccacaatgatttaaaccaataagagagtgagtattagagagaatgtttaaaagagagtgttgttagcatt 39471338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 50164392 - 50164582
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||| |||| |||| |||||||| |||||||||| |||||||||||||||||||| ||  ||| ||||||| ||| |||| ||||||||| ||||||    
T  50164392 gaggaatactagtaacactcactttttaacactctctctagcactcactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaat 50164491  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctcgt 216  Q
     ||||||||||| || ||||||||||||||||||||| | |||||  | || |||||| |||| ||||| ||||||  ||||||| |||||    
T  50164492 tttcaaagtgtagactcacaatgatttaaaccaataagaaagtgagcattagagagagtgttcaaaagatagtgttactagcattactcgt 50164582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 24834574 - 24834759
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||| ||||||||||||| ||||||||  ||||||||| || | |||||   ||||||| ||||||| ||||||||||| |||| |||||| || |||||    
T  24834574 agagaaatgctagcaacactcactttttgacactctctctaacgctcacatttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaa 24834673  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcg-ttcaaagagagtgttggtagcatt 210  Q
    | ||||||||||| ||||||||| |||||||||||||| ||||||| || || |||||| | || ||||||||||||| |||||||    
T  24834674 ttttcaaagtgtagacccacaataatttaaaccaataagagagtgactattagagagagagtttaaaagagagtgttgctagcatt 24834759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 34129584 - 34129439
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||| |||  || ||||||| ||| ||||||||||| |  |||||    
T  34129584 agaggaatggtagcaacattcacttttcaaaactctctctagcactcactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaa 34129485  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    | ||||||||||  || ||||||| |||||||||||||||||||||    
T  34129484 ttttcaaagtgtggactcacaatggtttaaaccaataaaagagtga 34129439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 163
Target Start/End: Original strand, 49077246 - 49077382
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||| || ||||||  ||  ||| ||| ||||||| ||||||||||| || ||||||    
T  49077246 gaggaatgctagcaacactcagttttcaacattctctttagcactcattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaat 49077345  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
     || |||||||| ||||||||||||||||||||||||    
T  49077346 ttttaaagtgtagacccacaatgatttaaaccaataa 49077382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 722177 - 722319
Alignment:
Q  50 tttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatg 149  Q
    |||||||||||||| |||||||||||  ||||||| ||| ||| || |||||||| |||||||||||    |||||| || |||||||| ||||||||||    
T  722177 tttcaacactctctctagcactcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatg 722276  T
Q  150 atttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    |||||||||||||| ||||||| || || |||||| |||||||    
T  722277 atttaaaccaataagagagtgagtattagagagagtgttcaaa 722319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 168
Target Start/End: Complemental strand, 20225522 - 20225383
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| |||||||| ||||||||||  ||||||||||| ||||||| |||||||  ||| |||||| |||||||| || || ||| ||    
T  20225522 gaggaatgctagcaacactcacttttgaacactctct--agcactcactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctat 20225425  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
     | ||||||||| || ||||||||||||||||||||| ||||    
T  20225424 ttccaaagtgtagactcacaatgatttaaaccaataagagag 20225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 33653673 - 33653515
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| ||| ||||||||||||||| ||  | |||||||||||||  ||| ||| ||||||||||| |||| ||||||||| |||||    
T  33653673 agaggaatgctagcaacactcagttttcaacactctctctattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaa 33653574  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    | |||||| | |  | |||||||||||||||||||||| | ||||| || || ||||||    
T  33653573 ttttcaaaatattgatccacaatgatttaaaccaataagaaagtgagtattagagagag 33653515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 20454545 - 20454723
Alignment:
Q  35 ctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaag 134  Q
    ||||||||| | ||||||||||||||||| |||||||||||| ||||||  ||  ||| |||||||||||   |||||||||  | |||||| |||||||    
T  20454545 ctagcaacacttacttttcaacactctctctagcactcactcttttattagataaaatcaatgtatgtcc--acactttgtgttggttcaattttcaaag 20454642  T
Q  135 tgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcattgctc 214  Q
    |||| | ||||||||||||||| |||||| ||||||| |  || |||||| |||| ||||||| ||||| |||| ||||||    
T  20454643 tgtagatccacaatgatttaaatcaataacagagtgagtgttagagagagtgttcaaaagagaatgttgctagcgttgctc 20454723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 210
Target Start/End: Complemental strand, 26361485 - 26361307
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||||||||| |||||||||||||||||          ||||| ||||||| ||| | | |||||||| || |||| |||||| || ||||    
T  26361485 tagaggaatgctagcaacactcacttttcaacactctaa--------cactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttca 26361394  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    |||||||||||||| ||||| ||||||||||||||||||  |||||| || || |||| | |||| ||||||||||||| |||||||    
T  26361393 atattcaaagtgtagacccataatgatttaaaccaataagtgagtgagtattagagagggtgttcaaaagagagtgttgctagcatt 26361307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 192
Target Start/End: Complemental strand, 754743 - 754598
Alignment:
Q  47 acttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccaca 146  Q
    ||||||||||||| ||| || ||||||||  ||||||| ||| | | || |||||||| |||||||||||    |||||| || |||||||| |||||||    
T  754743 acttttcaacactttctctaacactcacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccaca 754644  T
Q  147 atgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    ||||||||||||||||| ||||||| || || |||||| |||||||    
T  754643 atgatttaaaccaataagagagtgagtattagagagagtgttcaaa 754598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 45081926 - 45081781
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||| ||||||||||| ||||| |||| ||| ||||||||| | || ||||||  |||||||| ||| |||| |||||| |||||| || | | |    
T  45081926 agaggaatgttagcaacattctcttttgaacattctttttagcacttattcttttatttgatggaatacatgcatgttctaccattttgtgtgggtccta 45081827  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    | | ||||||||| || |||||| ||||||||||||||||||||||    
T  45081826 tttccaaagtgtacactcacaataatttaaaccaataaaagagtga 45081781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 50571860 - 50571985
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||| |||| ||||||  ||| ||| |||||||| || | || ||| || ||||||||    
T  50571860 agaggaatgttagcaacagtcacttttcaacactctctctagcacttactcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaa 50571959  T
Q  126 tattcaaagtgtaaacccacaatgat 151  Q
    | ||||||||||| |||| |||||||    
T  50571960 ttttcaaagtgtagacccgcaatgat 50571985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 170
Target Start/End: Complemental strand, 48339515 - 48339380
Alignment:
Q  35 ctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaag 134  Q
    ||||||||| ||||| || | ||||||||||| |||||||||  |||||| |   ||| ||||||||| | ||||||||||| || |||||| |||||||    
T  48339515 ctagcaacactcactattgagcactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaag 48339416  T
Q  135 tgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
     ||| ||||| |||| ||||||||||||||||||||    
T  48339415 cgtagacccataatgctttaaaccaataaaagagtg 48339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 214
Target Start/End: Original strand, 22542424 - 22542566
Alignment:
Q  73 actcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaa 172  Q
    |||| ||||||||||| ||| || |||||| | ||||||||||| || |||||| |||||||  ||  ||||||||||||||||| ||||| |||||||     
T  22542424 actcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgag 22542523  T
Q  173 taataaagagagcgttc-aaagagagtgttggtagcattgctc 214  Q
    || |||| |||| |||| ||||| ||||||| |||||||||||    
T  22542524 tattaaaaagagtgttcaaaagatagtgttgttagcattgctc 22542566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 40991773 - 40991607
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| ||||||||||||||||||| || ||||||||| || |||| ||| ||| ||| ||||||| ||| | ||||   |   | |    
T  40991773 agaggaatgctagcaacactcacttttcaacactctctctatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcacta 40991674  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    | |   ||||||| |||||||||||||||||||||||||||||||| ||  | |||||| |||||||    
T  40991673 tttctgaagtgtagacccacaatgatttaaaccaataaaagagtgagtatcagagagagtgttcaaa 40991607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 179
Target Start/End: Complemental strand, 10169822 - 10169676
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||| |||||||||||||||||||||||||  |  | ||||||  |||||| ||| ||| ||| ||||||||||||||||||| |  |||||| |||    
T  10169822 aatgctaacaacattcacttttcaacactctct--aatattcactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttc 10169725  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaa 179  Q
    |||   || | ||||||| |||||||||||||| |||||||||| ||||    
T  10169724 aaaacatagatccacaattatttaaaccaataagagagtgaatattaaa 10169676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 24938589 - 24938456
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||||| |||||| ||||||| |      |||||||| ||||||| ||| ||| ||||||||||| |||| |||||  || |||||| ||    
T  24938589 gaatgctagcaacatttactttttaacactcac------actcactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttt 24938496  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagt 169  Q
     |||||||| ||| |||||||||||||||||||| |||||    
T  24938495 taaagtgtagacctacaatgatttaaaccaataagagagt 24938456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 50481708 - 50481584
Alignment:
Q  47 acttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccaca 146  Q
    ||||||||||||||| |||  ||||||||| ||||||| ||| ||| || |||||||  ||||||||||  || ||| || ||||||||||| || ||||    
T  50481708 acttttcaacactctttttctcactcactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacaca 50481609  T
Q  147 atgatttaaaccaataaaagagtga 171  Q
    || |||||||||||||| |||||||    
T  50481608 atcatttaaaccaataagagagtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 1559891 - 1559812
Alignment:
Q  36 tagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgt 115  Q
    |||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||| || |||||||| |||| |||||    
T  1559891 tagcaacactcacttttgtacactctctttagcactcactcctttattgaatggaatcaacgtatgtcccaccaatttgt 1559812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 47009187 - 47009351
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    ||||||| || ||| | ||| ||||||||||||| | |||||||||||| ||||||| ||  ||| ||||| ||||  ||| ||||||| |  ||||||     
T  47009187 aggaatgttaacaaaactcatttttcaacactctttctagcactcactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaatt 47009286  T
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    ||||||||||| |  ||||||||||||||||||||| | ||||| || || |||| | |||||||    
T  47009287 ttcaaagtgtagatacacaatgatttaaaccaataagaaagtgagtattagagagggtgttcaaa 47009351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 174
Target Start/End: Complemental strand, 31251016 - 31250919
Alignment:
Q  77 atttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    |||||||| ||| ||| ||||||||||| |||| ||| |||   |||||| |||||| |||| ||||||||||||||||| |||||||||||| ||||    
T  31251016 atttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagtaaata 31250919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 22592298 - 22592390
Alignment:
Q  24 atagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtg 116  Q
    |||||||| || |||||||  |||||||| |||| ||||| | |||||||||| ||||||| ||| ||||||||| ||||| |||||||||||    
T  22592298 atagaggattgatagcaacgctcacttttgaacattctctctggcactcactcttttattggatgaaataaatgtttgtcccaccactttgtg 22592390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 46287441 - 46287573
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    ||||||||| |||| ||||||||||| | | | | ||||||| |||  ||||||| ||| ||| ||| |||||| ||| |||||||| |  |||||| ||    
T  46287441 gaatgctagtaacactcacttttcaatattttttctagcacttactattttattggatgaaattaatatatgtcttactactttgtgtgtattcaatttt 46287540  T
Q  130 caaagtgtaaacccacaatgatttaaaccaata 162  Q
    ||||||||  || ||||||||||||||||||||    
T  46287541 caaagtgttgactcacaatgatttaaaccaata 46287573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 210
Target Start/End: Original strand, 49242167 - 49242351
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||| || ||| |||| |||||||| |||||||| | || || |||||  || |||| ||| ||| ||| ||||||| | ||||||||| || ||||||    
T  49242167 gaggagtgttaggaacactcacttttgaacactctatctaacagtcactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaat 49242266  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcg-ttcaaagagagtgttggtagcatt 210  Q
     ||||| ||||| |  ||||||||||||||||||||| ||| ||| ||  | |||||| | || ||||||||||||| |||||||    
T  49242267 tttcaatgtgtagattcacaatgatttaaaccaataagagaatgagtatcatagagagtgtttaaaagagagtgttgttagcatt 49242351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 33996106 - 33995985
Alignment:
Q  39 caacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgta 138  Q
    ||||| || ||||||||||| |||| || || |||||| |||||| |||  ||| ||||||||||  |||||||| || || |||||| |||||| | ||    
T  33996106 caacactctcttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaattta 33996007  T
Q  139 aacccacaatgatttaaaccaa 160  Q
    ||| ||||||| ||||||||||    
T  33996006 aactcacaatggtttaaaccaa 33995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 45311078 - 45310989
Alignment:
Q  80 tattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagt 169  Q
    ||||| ||| ||| ||| ||||||| |||||||||||||| |||||| ||||||||| | ||  ||||||||||||| |||||| |||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagt 45310989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 39016659 - 39016742
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctacca 109  Q
    |||| |||||||||||||||| ||||| |||||||||| || |||| |||  ||||||| ||| ||| ||||||||||| ||||    
T  39016659 agagaaatgctagcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgtatgtcccacca 39016742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 42862605 - 42862459
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||  |||| || ||||| | |||| ||| |||||||||||  |||||||  || ||| ||||||||||| |||||||| || || ||| |    
T  42862605 agaggaatgctaataacactctcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcca 42862506  T
Q  126 tattcaaagtgt-aaacccacaatgatttaaaccaataaaagagtga 171  Q
    | |||||||||| ||||  | | |||||| | |||||||||||||||    
T  42862505 ttttcaaagtgtgaaacataaattgatttcacccaataaaagagtga 42862459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 43958152 - 43958230
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctacca 109  Q
    |||| |||||||| ||| |||| |||| ||||| ||||| |||||| |||||||||| |||| ||||||||||| ||||    
T  43958152 aatgttagcaacactcagtttttaacattctctctagcattcactcttttattgaatagaatcaatgtatgtcccacca 43958230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 29699524 - 29699632
Alignment:
Q  65 tagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaa 164  Q
    |||||||||||| ||||||| ||| ||| |||  |||||| |||||||||||  | ||| || |||||||| ||  || ||||||||||||| ||||||     
T  29699524 tagcactcactcttttattggatgaaatcaatacatgtcccaccactttgtgttggttctat-ttcaaagtatagcccgacaatgatttaaaacaataag 29699622  T
Q  165 agagtgaata 174  Q
    ||||||||||    
T  29699623 agagtgaata 29699632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 46536374 - 46536293
Alignment:
Q  98 tatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaa 179  Q
    |||||| ||||||||||||    |||||| ||||||||||||||||||| |  |||||| |||||| |||||||||| ||||    
T  46536374 tatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtgaatattaaa 46536293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 50879470 - 50879535
Alignment:
Q  44 ttcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctacca 109  Q
    ||||||||| |||||||| | |||||||||||| |||||||||||||||  ||| |||||| ||||    
T  50879470 ttcacttttgaacactctttctagcactcactcttttattgaatggaattcatgcatgtcccacca 50879535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 53871047 - 53870998
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcact 75  Q
    |||||||||||||||||| ||||||| ||||||||||| || ||||||||    
T  53871047 agaggaatgctagcaacactcactttccaacactctctctaacactcact 53870998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 11895135 - 11895219
Alignment:
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataata-aagagagcgttc-aaagagagtgttggtagcatt 210  Q
    ||||||||||| |||||||||||||| ||| ||||| ||||||| ||||| || | || |||| ||||||||||||| |||||||    
T  11895135 ttcaaagtgtagacccacaatgatttgaacgaataagagagtgagtaatagaaaaaagtgttcaaaagagagtgttgctagcatt 11895219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 13519943 - 13520082
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaata--aatgtatgtcctaccactttgtggggcttc 123  Q
    |||||||||||||| | | ||| |||| || ||||||| |||||||||||  || |||| ||  || |  ||||||||| | ||||||||||| || |||    
T  13519943 agaggaatgctagcgatactcatttttaaatactctctgtagcactcactatttaattggataaaaaatcaatgtatgttccaccactttgtgcgggttc 13520042  T
Q  124 aatattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
      | | ||| ||||| ||||||||||||||||||||||||    
T  13520043 tgtttccaatgtgtatacccacaatgatttaaaccaataa 13520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 37451153 - 37451052
Alignment:
Q  68 cactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaaga 167  Q
    ||||||||| ||||||| || ||||  |||||  || ||||| |||||| |  ||| || ||||||||||| || | |||||||||||||||||||||||    
T  37451153 cactcactcttttattggatagaatccatgtacatcttaccaatttgtgag--ttctattttcaaagtgtagactcgcaatgatttaaaccaataaaaga 37451056  T
Q  168 gtga 171  Q
    ||||    
T  37451055 gtga 37451052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 40812032 - 40812091
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||| |||||||||||| ||  |||| |||||||||| |||||||||||| |||||||    
T  40812032 tagaggtatgctagcaacactcttttttgaacactctctctagcactcactcttttattg 40812091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 49682975 - 49682836
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||| |||||||| |   | ||||||||| ||||||||| |||||  ||||| | ||| ||| ||||||| ||  |||||||| |  |  |||||    
T  49682975 agaggaatgttagcaacacttgttattcaacactttctttagcattcacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaa 49682876  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
    | ||||||||||| | |||||  |||||||||||||||||    
T  49682875 ttttcaaagtgtagagccacatcgatttaaaccaataaaa 49682836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 52671869 - 52671984
Alignment:
Q  69 actcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
    |||||||  ||||||| ||| ||||||||||||||| |||| ||| ||    |||||| || ||||||||||  | ||||||||||||| ||||| | ||    
T  52671869 actcacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatag 52671968  T
Q  169 tgaataataaagagag 184  Q
    ||| || |||||||||    
T  52671969 tgagtattaaagagag 52671984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 16178610 - 16178691
Alignment:
Q  56 cactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgta 138  Q
    |||||||| |||||||||||| |||||||| || ||| ||||||||||| |||||||| || || ||| || | |||||||||    
T  16178610 cactctctctagcactcactc-tttattgagtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgta 16178691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 35179725 - 35179791
Alignment:
Q  144 acaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagcatt 210  Q
    ||||||||||| || ||||| |||||||||| |||||| || ||  ||||||||||||| |||||||    
T  35179725 acaatgatttatactaataatagagtgaatattaaagatagtgtcaaaagagagtgttgttagcatt 35179791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 41153351 - 41153229
Alignment:
Q  57 actctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaa 156  Q
    |||||||||| |||| |||| ||||||| ||| |||  ||| |||||| |||||||||||  | ||| || |  |||||||| |  |||||||||||| |    
T  41153351 actctctttatcacttactcttttattggatgaaattcatgcatgtcccaccactttgtgtaggttctatttctaaagtgtacattcacaatgatttaga 41153252  T
Q  157 ccaataaaagagtgaataataaa 179  Q
    ||||||||| ||| |||| ||||    
T  41153251 ccaataaaaaagtaaatactaaa 41153229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 5044629 - 5044576
Alignment:
Q  121 ttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    |||||| || ||| |||| |||||||| ||||||||||||||||||| ||||||    
T  5044629 ttcaatttttaaaatgtagacccacaacgatttaaaccaataaaagaatgaata 5044576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 208
Target Start/End: Original strand, 19447195 - 19447311
Alignment:
Q  94 aatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaa-acccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aa 191  Q
    ||||||||||| |||||||| || || ||| || |||||| || |  ||| ||||||||||||  |||| | ||||||| || ||||||||| |||| ||    
T  19447195 aatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattagagagtgagtattaaagagagtgttcaaa 19447294  T
Q  192 agagagtgttggtagca 208  Q
    ||||||||||| |||||    
T  19447295 agagagtgttgctagca 19447311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 46242113 - 46242000
Alignment:
Q  39 caacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgta 138  Q
    ||||| |||||||| ||||||||||  || |||||| | ||||| | ||| ||| | ||||||||| |||| ||||||  | |||||| |||||| | ||    
T  46242113 caacactcactttttaacactctct--agaactcacacttttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatata 46242016  T
Q  139 aacccacaatgattta 154  Q
     |||||||||||||||    
T  46242015 gacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 51206228 - 51206172
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||| ||||||||| || ||||| | |||||||| |||||||||||| |||||||    
T  51206228 aggaatactagcaacactctcttttgagcactctctctagcactcactcttttattg 51206172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 8e-39; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 41958082 - 41958224
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||||||| |||| ||||||||||||||||||   ||||||||||||||||||| ||| ||| ||||||||||| |||| ||||||||| ||||||    
T  41958082 gaggaatgctagtaacactcacttttcaacactctca--agcactcactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaat 41958179  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
     ||||||||||| ||||||| |||||||||||||||| |||||||    
T  41958180 tttcaaagtgtagacccacagtgatttaaaccaataagagagtga 41958224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 210
Target Start/End: Original strand, 931370 - 931555
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| |||||||||||| || ||| ||  |||||||| ||||||||||||||  ||||||||||| | || ||| || || |||||    
T  931370 agaggaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaa 931469  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaag-agagtgttggtagcatt 210  Q
    | |||||| | || ||||||||||||||||||||||||||||||||||| || | | || ||| |||| ||||||||| |||||||    
T  931470 ttttcaaaatatacacccacaatgatttaaaccaataaaagagtgaatattagaaaaagtgttaaaagaagagtgttgctagcatt 931555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 33193047 - 33193219
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||| ||| |||||| ||||||| |||| ||||| ||  ||||||| |||||||| ||| ||| ||||||||| | |||| |||||| || ||||||    
T  33193047 gaggaatactaacaacatccactttttaacattctctataatactcacttatttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaat 33193146  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtg 199  Q
     ||||||||||| |||||||||||||||||||||||| ||| ||| || || ||| || ||||||||||||||    
T  33193147 tttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtattagagaaagtgttcaaagagagtg 33193219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 6133809 - 6133664
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||||||| | ||||||| ||| ||| ||| ||||||| ||||  ||||| || ||||    
T  6133809 tagaggaatgctagcaacactcacttttcaacaatctctctagcactcacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttca 6133710  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    || |||||||| || ||||||||||| |||||||||||| |||||||    
T  6133709 attttcaaagtctacacccacaatga-ttaaaccaataagagagtga 6133664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 19101781 - 19101619
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||||||||||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||||||| |||||||| || |  ||| || ||    
T  19101781 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttt 19101682  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    ||||||||| | |  ||||||||||||||||||| | ||||| || || |||||| |||||||    
T  19101681 caaagtgtagatctgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaa 19101619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 210
Target Start/End: Original strand, 11987623 - 11987807
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||| ||| ||||| |||||||||||||||||||  | || | | |||||||||| ||| ||| ||||||||| | ||||||| ||| || ||||||    
T  11987623 gaggaatactaacaacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaat 11987722  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcg-ttcaaagagagtgttggtagcatt 210  Q
     ||||||||||| |||||||||||||||||||| ||| |||||| ||| || | |||| | || ||||||||||||| |||||||    
T  11987723 tttcaaagtgtagacccacaatgatttaaaccattaagagagtggatattagaaagagtgtttaaaagagagtgttgctagcatt 11987807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 165
Target Start/End: Original strand, 44271913 - 44272053
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||  ||||||||||| ||| ||||||||| | |||| ||| ||  | ||||    
T  44271913 tagaggaatgctagcaacatccacttttaaacactctctttagcacttactattttattgaatgaaatcaatgtatgttccaccattttttgtaggttca 44272012  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
    || ||||||||||| | | ||||||||||||| ||||||||    
T  44272013 attttcaaagtgtagaacaacaatgatttaaatcaataaaa 44272053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 209
Target Start/End: Complemental strand, 26980445 - 26980262
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||| ||||| ||||||||||||||||||| ||  ||||||||  |||||| ||| ||| ||||||||||| |||| |||||| |  ||||||    
T  26980445 gaggaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaat 26980346  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgtt-caaagagagtgttggtagcat 209  Q
     |||||| | || | ||||||||||||||| |||||| ||||||| || || |||||| |||  ||||||||||||| ||||||    
T  26980345 tttcaaaatatacatccacaatgatttaaatcaataagagagtgagtattatagagagtgttgaaaagagagtgttgctagcat 26980262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 3872813 - 3872676
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| | |||| |||  ||| ||| ||||||  |||||||||||  | |||||| |     
T  3872813 gaatgctagcaacactcacttttcaacactctctctagcactcactcttctattaaat-aaatcaatatatgtcacaccactttgtgtaggttcaatttc 3872715  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  3872714 caaagtgtagacccacaatgattcaaaccaataaaagag 3872676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 22540368 - 22540501
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||||||||||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||||||| |||||||| || |  ||| || |     
T  22540368 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 22540467  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataa 163  Q
    ||||||||| | || |||||||||||||||||||    
T  22540468 caaagtgtagatccgcaatgatttaaaccaataa 22540501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 163
Target Start/End: Original strand, 2225222 - 2225357
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||| |||| ||| |||||||||||||||  ||||| ||||| ||||||| ||| ||| ||||||||||| ||||||||||| || |||      
T  2225222 agaggaatgctagtaacactcaattttcaacactctct--agcacccactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcgg 2225319  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataa 163  Q
    | | ||||||||| ||| ||| ||||||||||||||||    
T  2225320 tttacaaagtgtagaccgacagtgatttaaaccaataa 2225357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 28218232 - 28218102
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||| | |||||||| ||| |||||||| |||||||||||| |||||| ||||||| ||| ||| ||||||||||  ||||||||||| || |||||    
T  28218232 agaggaaggttagcaacactcatttttcaaccctctctttagcattcactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaa 28218133  T
Q  126 tattcaaagtgtaaacccacaatgatttaaa 156  Q
    | ||||||||||| | ||||| | |||||||    
T  28218132 ttttcaaagtgtagaaccacagtaatttaaa 28218102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 10659953 - 10659808
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcattt-attgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    |||| |||| |||||||| ||||||||||| ||||||| || ||||||||  ||| || | ||| ||| |||| |||||| |||||||||||  | ||||    
T  10659953 agagtaatgttagcaacactcacttttcaatactctctctaacactcactttttttatgggatgaaatcaatggatgtccgaccactttgtgtaggttca 10659854  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
    || ||||||||||| |||||| ||||||||||||||||| ||||||    
T  10659853 attttcaaagtgtagacccacgatgatttaaaccaataagagagtg 10659808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 15523210 - 15523343
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||||||| |||||||| || |  ||| || |     
T  15523210 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 15523309  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataa 163  Q
     |||||||| | || |||||||||||||||||||    
T  15523310 taaagtgtagatccgcaatgatttaaaccaataa 15523343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 163
Target Start/End: Original strand, 15531204 - 15531337
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||||||| |||||||| || |  ||| || |     
T  15531204 gaatgctatcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttc 15531303  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataa 163  Q
     |||||||| | || |||||||||||||||||||    
T  15531304 taaagtgtagatccgcaatgatttaaaccaataa 15531337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 210
Target Start/End: Original strand, 8899007 - 8899195
Alignment:
Q  23 catagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggctt 122  Q
    ||||||| |||| |||||||| ||||||||||||| || || || ||||  ||  || |||  ||| |||||| |||||||| ||| ||||||| || ||    
T  8899007 catagagaaatgttagcaacactcacttttcaacattccctctaacacttgctatttaattagatgaaataaaggtatgtcccacccctttgtgtgggtt 8899106  T
Q  123 caatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    |||| |||||||||||   ||||||| |||||||||||||| ||||||| || || |||||| |||| ||||||| ||||| |||||||    
T  8899107 caattttcaaagtgtaggtccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagattgttgctagcatt 8899195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 32211941 - 32211823
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    |||||||||||  ||||||||||| ||||||  ||| ||| ||||||||||| || |||||||| |  |||||| || || ||||| |||||||||||||    
T  32211941 caacactctctccagcactcactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatt 32211842  T
Q  153 taaaccaataaaagagtga 171  Q
    ||||||||||| |||||||    
T  32211841 taaaccaataagagagtga 32211823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 214
Target Start/End: Complemental strand, 41948287 - 41948141
Alignment:
Q  69 actcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
    |||||||| ||||||| ||  ||| ||||||| | |||||||||||||  | |||||| ||||||||||||| ||||||||||||||| |||||| ||||    
T  41948287 actcactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatttaaatcaataagagag 41948188  T
Q  169 tgaataataaagagagcgttc-aaagagagtgttggtagcattgctc 214  Q
    ||| |  || |||||| |||| ||||||| | ||| |||||||||||    
T  41948187 tgagtgttagagagagtgttcaaaagagaatattgctagcattgctc 41948141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 8741405 - 8741262
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctct--ttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaata 127  Q
    |||||||||||||| ||||||||||| |||||||  ||||   |||||  ||||||| ||| ||| ||||||||||  || | |||||| || ||||||     
T  8741405 gaatgctagcaacactcacttttcaaaactctctctttagtggtcacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaatt 8741306  T
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    |||||||| ||||| ||||||||||||||| ||||| |||||||    
T  8741305 ttcaaagtataaacacacaatgatttaaactaataagagagtga 8741262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 171
Target Start/End: Complemental strand, 30679027 - 30678950
Alignment:
Q  94 aatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    ||||||||||| ||||||||||| || |||||| ||||||||||| || ||||||||||||| ||||||| |||||||    
T  30679027 aatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtga 30678950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 208
Target Start/End: Original strand, 15928579 - 15928732
Alignment:
Q  54 aacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgattt 153  Q
    |||||||||| |||||| ||||| ||||||  |||||||  |||||||||  |||| |||||| |  ||| || ||||| ||||| ||  ||| ||||||    
T  15928579 aacactctctctagcacccactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgattt 15928678  T
Q  154 aaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
    |||||||||||||||||| || |  |||||| |||| |||||||||||||||||||    
T  15928679 aaaccaataaaagagtgagtatt--agagagtgttcaaaagagagtgttggtagca 15928732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 39039537 - 39039481
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  39039537 aggaatgctagcaacactcacttttcaacactctttttagcactcactcttttattg 39039481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 32848766 - 32848655
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||| ||||| || ||||| |||||||||| |||||||||||| |||||||  || ||| | ||||||||| |||||||| || || ||| ||    
T  32848766 gaggaatgctaacaacactctcttttgaacactctctctagcactcactcttttattgggtgaaatcattgtatgtcccaccactttatgtggattccat 32848667  T
Q  127 attcaaagtgta 138  Q
     |||||||||||    
T  32848666 tttcaaagtgta 32848655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 41095788 - 41095681
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||| || ||||| | |||||||| ||||||||||||||||||||  || ||| ||||||||||| | |||| |||| || ||| || |||    
T  41095788 aatgctagcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtatgtcccatcactctgtgtgggttccattttc 41095689  T
Q  131 aaagtgta 138  Q
    ||||||||    
T  41095688 aaagtgta 41095681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 44739114 - 44739201
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    ||||||||| |||||||| || ||||| |||||||||| |||||||||||| ||| |||| || ||| ||||||||||| ||||||||    
T  44739114 agaggaatgttagcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgtatgtcccaccacttt 44739201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 25543336 - 25543426
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtg 116  Q
    |||||||||||||||||| |||||||| |||||||||| || |||| |||| ||||||  ||| ||| ||| ||||||| |||||||||||    
T  25543336 agaggaatgctagcaacactcacttttaaacactctctctaacacttactcttttatttgatgaaatcaatatatgtcccaccactttgtg 25543426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 41917995 - 41918137
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| || ||||| | ||| |||| |||||||||||| |||||||  || ||| ||||||||||| |||||||| || || ||| || ||    
T  41917995 gaatgctagcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccatttt 41918094  T
Q  130 caaagtgta-aacccacaatgatttaaaccaataaaagagtga 171  Q
    |||||||||   || ||| |||||| | |||||||||||||||    
T  41918095 caaagtgtaggtcctacattgattttacccaataaaagagtga 41918137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 49730885 - 49730995
Alignment:
Q  51 ttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatga 150  Q
    ||||||||||||| || ||||||||| ||||||  ||  ||  ||| ||||||  || |||||||| || |||||| ||||||||||| |||||||||||    
T  49730885 ttcaacactctctataacactcactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatga 49730984  T
Q  151 tttaaaccaat 161  Q
    |||||||||||    
T  49730985 tttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 11135736 - 11135881
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| || ||||| | |||||||| |||||||||||  |||||||  || ||| ||||||||||| |||||||| || || ||| ||    
T  11135736 gaggaatgctagcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11135835  T
Q  127 attcaaagtgta-aacccacaatgatttaaaccaataaaagagtga 171  Q
     | |||||||||   || ||| |||||| | |||||||||||||||    
T  11135836 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtga 11135881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 51732375 - 51732456
Alignment:
Q  128 ttcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttggtagcat 209  Q
    |||||||| |||||||||||| |||||||||||||||||||||| || || ||| | |||||||| | ||||||| ||||||    
T  51732375 ttcaaagtataaacccacaataatttaaaccaataaaagagtgagtattagagaaaacgttcaaaaaaagtgttgctagcat 51732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 45179388 - 45179308
Alignment:
Q  68 cactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaat 148  Q
    |||||| |||||||||||||  ||| ||||||||| | | ||||||||| || |||||| |||||||||||||||||||||    
T  45179388 cactcattcatttattgaataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaat 45179308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 6325993 - 6325863
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||| ||||||||  |||||||| ||||||||||  |  | ||||||||||||| |||  ||| ||||||||||| |||| |||||| |  |||  |    
T  6325993 gaggaatactagcaacgctcacttttgaacactctct--aataatcactcatttattaaataaaatcaatgtatgtcccaccattttgtgtgagttcttt 6325896  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaa 160  Q
     |||||||||||||||||||||||| ||||||||    
T  6325895 -ttcaaagtgtaaacccacaatgatgtaaaccaa 6325863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 21466751 - 21466697
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||||||||||||||||||||  |||||||||||||||||||||  |||||||    
T  21466751 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattg 21466697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 14094186 - 14094073
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||||| |||||  ||||| ||||||||||  ||||||||||  |||||||  || ||| ||||||||||| |||||||| || || |||     
T  14094186 tagaggaatgctagcgacattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttcc 14094087  T
Q  125 atattcaaagtgta 138  Q
    || | |||||||||    
T  14094086 atttccaaagtgta 14094073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 15468258 - 15468359
Alignment:
Q  68 cactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaaga 167  Q
    ||||||||| |||||| ||| |||| ||||||||||  |  |||||||| || |||||| |||| |||||| ||||||||| |||||||  |||||||||    
T  15468258 cactcactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaaga 15468357  T
Q  168 gt 169  Q
    ||    
T  15468358 gt 15468359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 27570234 - 27570406
Alignment:
Q  39 caacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgta 138  Q
    ||||| |||||||| |||||||||| |  |||||| || |||||||  || ||| ||  ||||||| |||| |||||| |  || ||| || ||||||||    
T  27570234 caacagtcactttttaacactctctctgacactcattcttttattggttgaaattaagatatgtcccaccaatttgtgtgagtttaatttttaaagtgta 27570333  T
Q  139 aacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
    ||||||||||||||| ||| ||||| | |||||||   | |||||| |||| ||||||| ||||| |||||||    
T  27570334 aacccacaatgatttgaactaataagaaagtgaatttgagagagagtgttcaaaagagaatgttgctagcatt 27570406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 41095600 - 41095660
Alignment:
Q  24 atagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||||||||||||||||| || ||||| | |||||||| ||||||||||| ||||||||    
T  41095600 atagaggaatgctagcaacactctcttttgagcactctctctagcactcacttatttattg 41095660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 11430438 - 11430549
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||| ||||| || ||||| | |||||| | |||||||||||| |||||||  || ||| ||||||||||| |||||||| || || ||| ||    
T  11430438 gaggaatgctaacaacactctcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccat 11430537  T
Q  127 attcaaagtgta 138  Q
     | |||||||||    
T  11430538 ttccaaagtgta 11430549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 29673498 - 29673629
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    ||||||||||| || |||||| |  ||||||| ||  ||| ||| ||||||| |||| ||||||  | |||||| ||||||||||| | | ||||| |||    
T  29673498 caacactctctctaacactcattattttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatt 29673597  T
Q  153 taaaccaataaaagagtgaataataaagagag 184  Q
    ||||||||||||| ||||| || || ||||||    
T  29673598 taaaccaataaaaaagtgagtattagagagag 29673629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 11430627 - 11430569
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||||||||||||||||| || ||||| | |||||||| |||||||||||| |||||||    
T  11430627 agaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattg 11430569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 37553110 - 37552977
Alignment:
Q  49 ttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaat 148  Q
    |||| |||||||||| ||||||| |||   |||||| ||| ||| ||||| ||||| | ||||||  | || ||  || ||||||||||| | |||||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgtttgtcccatcacttttagtgggttttattttcaaagtgtagatccacaat 37553011  T
Q  149 gatttaaaccaataaaagagtgaataataaagag 182  Q
    |||||||| |||||| ||||||| || |||||||    
T  37553010 gatttaaatcaataagagagtgagtattaaagag 37552977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 9165297 - 9165385
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    ||||||||||||| | ||| || ||||| | |||||| | | |||||||||| |||||||  || ||| ||||||||||||||||||||    
T  9165297 tagaggaatgctatccacactctcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgtatgtcctaccacttt 9165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 11851921 - 11851957
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctct 63  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11851921 gaggaatgctagcaacattcacttttgaacactctct 11851957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 33060072 - 33059933
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||| | ||||||||| | ||  |||||| || |||||| ||||||| ||| ||| || | |||||| |||||| | || || || ||| ||    
T  33060072 gaatgctagcaatactcacttttctatacattctttaacagtcactcttttattggatgaaattaaagcatgtcc-accactctctgtgggtttaatttt 33059974  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
     |||||||| || ||||||| ||||||||||||| ||||||    
T  33059973 taaagtgtacactcacaatgttttaaaccaataagagagtg 33059933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 33114159 - 33114099
Alignment:
Q  24 atagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    |||| ||||||||||||| |||||||||| |||||||||| ||| |||||||  |||||||    
T  33114159 atagtggaatgctagcaagattcacttttaaacactctctataggactcacttttttattg 33114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 33114037 - 33114112
Alignment:
Q  96 tgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    ||||||||| |||| ||| ||  | |||||| ||||||||||| | ||| |||||||||||||||||||| |||||    
T  33114037 tgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtga 33114112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 18157039 - 18157121
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    ||||||||  ||| || |||||||||||||||| || ||| ||||  ||||||| ||| ||| ||||||||||| ||||||||    
T  18157039 aatgctagggacactctcttttcaacactctctctaacacccacttttttattggatgaaattaatgtatgtcccaccacttt 18157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 43851218 - 43851132
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    |||||||| |||||||| || ||||| | | | |||| ||| ||||||||||||||||  || ||| ||||||||||| ||||||||    
T  43851218 gaggaatgttagcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgtatgtcccaccacttt 43851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 4578752 - 4578674
Alignment:
Q  33 tgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    ||||||||||| || |||||||||||||||  || ||||||||| |||||||  || ||| |||||| |||| ||||||||    
T  4578752 tgctagcaacactctcttttcaacactctc--taacactcactcttttattgggtgaaatcaatgtaggtcccaccacttt 4578674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 39019571 - 39019608
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctct 63  Q
    |||||||||||||||||| || ||||||||||||||||    
T  39019571 agaggaatgctagcaacactctcttttcaacactctct 39019608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 156
Target Start/End: Original strand, 46335092 - 46335223
Alignment:
Q  28 aggaatgctagcaacattcacttttcaacactctctttagcactcac---tcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||||   |||||||| |||||||| | ||||||||||   || ||||||| ||| ||| ||| ||| ||||||||||||||  |  ||      
T  46335092 aggaatgctagcaaacctcacttttgaacactctttctagcactcactcttcttttattggatgaaatcaatctatatcctaccactttgtcagagttat 46335191  T
Q  125 atattcaaagtgtaaacccacaatgatttaaa 156  Q
    || ||||| || || |||||||||||||||||    
T  46335192 attttcaatgtatagacccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 47644396 - 47644339
Alignment:
Q  111 tttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
    |||||| || ||| || ||||| ||||||||||||||||||||||| |||||| ||||    
T  47644396 tttgtgtgggttctattttcaatgtgtaaacccacaatgatttaaatcaataagagag 47644339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 50539162 - 50539259
Alignment:
Q  68 cactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaa 165  Q
    ||||||||| ||||||| ||| ||| || |||||| | |||||||| || || |||||| |||  |||||| || | ||||||||||||| |||||||    
T  50539162 cactcactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgcaatgatttaaactaataaaa 50539259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 12767407 - 12767367
Alignment:
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    |||||||| || || ||||||||||||||||||||||||||    
T  12767407 aaagtgtagactcataatgatttaaaccaataaaagagtga 12767367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 13388331 - 13388403
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    ||||||||||||||||| || ||||| || ||||||| || ||||||||  ||||||| ||| ||| ||||||    
T  13388331 gaggaatgctagcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgta 13388403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 202
Target Start/End: Complemental strand, 28490906 - 28490729
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| |||||  ||||||| ||| ||| || |||||||| |||||||||||    |||||    
T  28490906 agaggaatgctagcaacagtcacttttcaaaactctctctagcattcacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaa 28490807  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttg 202  Q
    | || |||||||| ||||||||| |||||||||||||| ||||||| || || |||||| |||| |||||||||||||    
T  28490806 ttttgaaagtgtagacccacaataatttaaaccaataagagagtgagtattagagagagtgttcaaaagagagtgttg 28490729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 200
Target Start/End: Complemental strand, 30326054 - 30325883
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||||||||||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||||||  |||||||| || |  ||| || |     
T  30326054 gaatgctagcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctc 30325955  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgt 200  Q
    ||||||||| | || ||||||||||||||||||| | ||||| || || |||||| |||| |||||||||||    
T  30325954 caaagtgtagatccgcaatgatttaaaccaataagaaagtgagtattagagagagtgttcaaaagagagtgt 30325883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 25710629 - 25710498
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    |||||||||||||| ||||||||| |||||||  || ||| ||||||||||||||||||| ||  |  ||| || ||||||||||| ||||||||| |||    
T  25710629 caacactctctttatcactcactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatt 25710530  T
Q  153 taaaccaataaaagagtgaataataaagagag 184  Q
    ||||||||||| ||| |||||| |||||||||    
T  25710529 taaaccaataagagaatgaatattaaagagag 25710498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 210
Target Start/End: Original strand, 34368357 - 34368541
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| | | |||| |||||| ||| || ||||||||| || |||| ||  ||  ||||||||| | ||||||||||| || |||| |    
T  34368357 gaggaatgctagcaacacttatttttgaacactttctctaacactcactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatt 34368456  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagcatt 210  Q
     ||||||||||| |||||||||||||||||||||||| ||||||  | | | |||||| | || ||||||||||||| |||||||    
T  34368457 tttcaaagtgtagacccacaatgatttaaaccaataagagagtgggtgacagagagagtgctcaaaagagagtgttgctagcatt 34368541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 171
Target Start/End: Complemental strand, 5413878 - 5413776
Alignment:
Q  69 actcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagag 168  Q
    |||||||| ||||||| ||| ||| ||||||||||| ||||||||||| || |||||| | ||||||||| ||||| |||||||||||||||||||| ||    
T  5413878 actcactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaag 5413779  T
Q  169 tga 171  Q
    |||    
T  5413778 tga 5413776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 10142154 - 10142015
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||||||||||||| ||| ||||||||||||| |  ||||||||||| ||||||| ||  ||| ||||||||||| |||||||||||  | ||| || ||    
T  10142154 gaatgctagcaacactcatttttcaacactctat--agcactcactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccatttt 10142057  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    ||||||||| ||| ||||| ||||||| |||||| |||||||    
T  10142056 caaagtgtagaccaacaattatttaaatcaataagagagtga 10142015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 28223955 - 28223815
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||||| |||||||||||||||  ||||| |||| | || ||||||||||| ||| | ||||||| |  | | |||||| ||  ||||| |||    
T  28223955 aatgctagcaacactcacttttcaacactacctttaacacttattcttttattgaatgaaattattgtatgttcaccaattttgtgtgggctcaattttc 28223856  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    ||||| || ||||| ||||||||||||||||||||||||||    
T  28223855 aaagtatagacccataatgatttaaaccaataaaagagtga 28223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 174
Target Start/End: Complemental strand, 17537285 - 17537138
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    |||||||| || ||| | ||||||||||||||||||| || ||||||||| ||||||  ||  ||| ||||||||||| |||| ||| ||  | || |||    
T  17537285 gaggaatgataacaatactcacttttcaacactctctctatcactcactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaat 17537186  T
Q  127 attcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
     ||||||||||| | ||| |||||||||||||||||| ||||||||||    
T  17537185 tttcaaagtgtagatccataatgatttaaaccaataagagagtgaata 17537138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 37455345 - 37455489
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||||||| || | |||| ||| |||| |||||||||| |||||| ||||||||||||  ||  ||| ||||||||| | |||| ||||||||| |||||    
T  37455345 agaggaatacttgtaacactcattttttaacactctctctagcacacactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaa 37455444  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
    | ||||||||||| || |||||| | |||||||||||| |||||||    
T  37455445 ttttcaaagtgtagactcacaat-aattaaaccaataagagagtga 37455489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 43405389 - 43405537
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    ||||||||||||  || | ||| |||| ||||| ||||||  ||||||||| ||||||||||| ||| ||||||||||  ||||||||||     ||| |    
T  43405389 agaggaatgctaataatactcaatttttaacacgctctttgtcactcactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttcta 43405488  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    | | ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  43405489 tttccaaagtgtagacccacaatgatttaaatcaataagagagtgaata 43405537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 39246603 - 39246749
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||||||||| |||||||| | ||  |||| || || |||||   |||||| ||  ||| ||||||||||| ||||||||||| |  ||||    
T  39246603 tagaggaatgctagcaacaatcacttttgagcatcctctctaacaatcactttcttattggataaaatcaatgtatgtcccaccactttgtgtgagttca 39246702  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagtga 171  Q
     | ||||||||||| |||||||||  ||||||||||||| |||||||    
T  39246703 gttttcaaagtgtagacccacaatactttaaaccaataagagagtga 39246749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 163
Target Start/End: Complemental strand, 41330572 - 41330440
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    |||| ||| |||||| | |||| |||||||| | |||||  ||||| ||||||  ||| ||| ||||||||||| | |||||||||  | |||||| |||    
T  41330572 aatgttagaaacatttatttttgaacactctttgtagcatccactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttc 41330473  T
Q  131 aaagtgtaaacccacaatgatttaaaccaataa 163  Q
    |||||||| || |||||||||||||||||||||    
T  41330472 aaagtgtagactcacaatgatttaaaccaataa 41330440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 34384856 - 34384709
Alignment:
Q  45 tcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaaccca 144  Q
    |||||||| || ||| |||||| |||||| || |||||||  || ||| ||||||||||| || | |||||| |  |||||| |||||| | || || ||    
T  34384856 tcactttttaatactttctttaacactcattcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactca 34384757  T
Q  145 caatgatttaaaccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    |||||||||| ||| |||||||||||| || ||||||||| |||||||    
T  34384756 caatgatttagaccgataaaagagtgagtattaaagagagtgttcaaa 34384709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 113
Target Start/End: Complemental strand, 40971636 - 40971550
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccacttt 113  Q
    ||||||||||| ||||| || ||||| | |||||||| |||||||||||| |||||||| || ||| ||||||||||| ||||||||    
T  40971636 gaggaatgctaacaacactctcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgtatgtcccaccacttt 40971550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 202
Target Start/End: Complemental strand, 41105727 - 41105577
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    ||||||||||| ||  ||| |||| ||||||| ||| ||| || | |||||| || |||||||| || |||||| ||||||||| | ||||||| |||||    
T  41105727 caacactctctataaaacttactcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatt 41105628  T
Q  153 taaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttg 202  Q
    ||||||||||| |||| || || || |||||| | || |||||||||||||    
T  41105627 taaaccaataagagagcgagtattagagagagtgctcaaaagagagtgttg 41105577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 171
Target Start/End: Complemental strand, 42224774 - 42224629
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaat 126  Q
    ||||||||||||||||| || ||||| | |||||||| |||||||||||| ||||||   || ||| ||||||||||| |||||||| || || ||| ||    
T  42224774 gaggaatgctagcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccat 42224675  T
Q  127 attcaaagtgta-aacccacaatgatttaaaccaataaaagagtga 171  Q
     | |||||||||   || ||| |||||| | |||||||||||||||    
T  42224674 ttccaaagtgtaggtcctacattgatttcacccaataaaagagtga 42224629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 27592632 - 27592492
Alignment:
Q  30 gaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatatt 129  Q
    |||| |||| |||| || |||||  |||||||||||||||||||||  ||||||| ||| ||| ||||||||||  |||||||| || |  ||| || |     
T  27592632 gaattctagtaacactcgcttttgcacactctctttagcactcactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttc 27592533  T
Q  130 caaagtgtaaacccacaatgatttaaaccaataaaagagtg 170  Q
    ||||||||| | |  ||||||||||||||||||| ||||||    
T  27592532 caaagtgtagatctgcaatgatttaaaccaataagagagtg 27592492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 28090340 - 28090265
Alignment:
Q  99 atgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaata 174  Q
    |||||| ||||||||||| |  |||||| |||||||| || | | |||||||||||||||||||||||||||||||    
T  28090340 atgtcccaccactttgtgtgagttcaattttcaaagtttagatcaacaatgatttaaaccaataaaagagtgaata 28090265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 25630808 - 25630938
Alignment:
Q  31 aatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattc 130  Q
    ||||||||||| | | |||||||||||||||||||| || | |||  |||||| |||  ||| ||||||| ||| || | |||||   | |||||| |||    
T  25630808 aatgctagcaatacttacttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttc 25630907  T
Q  131 aaagtgtaaacccacaatgatttaaaccaat 161  Q
    |||||||| |||||| |||||||||||||||    
T  25630908 aaagtgtagacccacgatgatttaaaccaat 25630938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 10950109 - 10950230
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    |||||||||||||  |||| |||| || |||||||| ||| ||||||||||| |||| |||||  || ||| || |||||||| || || || |||||||    
T  10950109 caacactctctttctcacttactctttcattgaatgaaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatt 10950208  T
Q  153 taaaccaataaaagagtgaata 174  Q
    ||||| ||||| ||| ||||||    
T  10950209 taaactaataagagaatgaata 10950230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 202
Target Start/End: Complemental strand, 17435019 - 17434857
Alignment:
Q  38 gcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgt 137  Q
    |||||| | ||||||||||||||||||||  |||||||  ||||||| ||  || |||| ||||| |||| | |||||  |  ||| || |  |||||||    
T  17435019 gcaacacttacttttcaacactctctttattactcact--tttattggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgt 17434922  T
Q  138 aaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttcaaagagagtgttg 202  Q
    | ||||||| ||||||||||||||||||||||||| | || |||||   || |||||||||||||    
T  17434921 agacccacattgatttaaaccaataaaagagtgaacattagagagatgtttaaaagagagtgttg 17434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 169
Target Start/End: Complemental strand, 28611963 - 28611819
Alignment:
Q  25 tagaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttca 124  Q
    ||||||||||||| ||||| |||||||| | |||||||| || || |||||| || |||| ||  ||  | ||||||||| | ||||||||  |  |||     
T  28611963 tagaggaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttcc 28611864  T
Q  125 atattcaaagtgtaaacccacaatgatttaaaccaataaaagagt 169  Q
    || || |||||||| || |||||||||||||| ||||||||||||    
T  28611863 atttttaaagtgtagacgcacaatgatttaaatcaataaaagagt 28611819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 25919303 - 25919362
Alignment:
Q  122 tcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaaga 181  Q
    ||||| ||||||||||| || ||||||||||||||||||||||| | |||||| ||||||    
T  25919303 tcaattttcaaagtgtagactcacaatgatttaaaccaataaaaaaatgaatattaaaga 25919362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 28434973 - 28434865
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    ||||||||||| || |||| | || ||||||| ||  ||| ||| ||||||| |||||| ||| ||  |||||| |||||||| || |||||||||||||    
T  28434973 caacactctctctaacactaattcttttattggataaaatcaatatatgtcccaccactgtgttgg--ttcaattttcaaagtttagacccacaatgatt 28434876  T
Q  153 taaaccaataa 163  Q
    |||||||||||    
T  28434875 taaaccaataa 28434865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 165
Target Start/End: Complemental strand, 36338050 - 36337935
Alignment:
Q  50 tttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatg 149  Q
    |||||||||||  ||||||||||| |  ||||||  ||| ||| ||||||||||| |  | ||||||    |||||| | ||||||||| ||||||||||    
T  36338050 tttcaacactcattttagcactcattattttatttgatgaaattaatgtatgtcccataattttgtgtatgttcaatttccaaagtgtagacccacaatg 36337951  T
Q  150 atttaaaccaataaaa 165  Q
    ||||||||||||||||    
T  36337950 atttaaaccaataaaa 36337935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 32309477 - 32309562
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactt 112  Q
    ||||||||||||  ||| || |||||||||| ||||| ||||||||||||  |||||| ||  ||| ||||||||||| |||||||    
T  32309477 gaggaatgctagagacactctcttttcaacattctctctagcactcactctcttattggataaaattaatgtatgtccgaccactt 32309562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 208
Target Start/End: Original strand, 4714745 - 4714928
Alignment:
Q  26 agaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaa 125  Q
    |||| ||||||| |||| ||||||||| ||| |||| |||| || |||||  ||||||| ||  ||| | ||| ||||| | || |||||| || ||| |    
T  4714745 agagaaatgctaacaactttcacttttgaaccctctttttaacattcacttttttattggattaaattattgtgtgtcccatcattttgtgtgggttcta 4714844  T
Q  126 tattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
    | |||||| |||| |  |||||||||||| |||||||||||||   ||| || |||||  |||| ||||||||||||| |||||    
T  4714845 ttttcaaaatgtagatacacaatgatttataccaataaaagagaacatattagagagaatgttcaaaagagagtgttgctagca 4714928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 31885964 - 31885877
Alignment:
Q  77 atttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaa 164  Q
    |||||||| ||| ||  |||| |||||| |||| ||| ||| | |||||| ||||||||||| | | |||||||||||||||||||||    
T  31885964 atttattggatgaaaacaatggatgtcccaccattttctggaggttcaattttcaaagtgtagatctacaatgatttaaaccaataaa 31885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 26072289 - 26072232
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattg 84  Q
    ||||||||||||||||| || ||||| | || ||||| |||||||||||| |||||||    
T  26072289 gaggaatgctagcaacactctcttttgagcattctctctagcactcactcttttattg 26072232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 10666802 - 10666714
Alignment:
Q  96 tgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagag 184  Q
    ||||| |||||||||||| || || ||| || || ||| |||| || |||| | |||||||||||||| |||||||||  |||||||||    
T  10666802 tgtatatcctaccactttatgtgggttccatttttaaattgtagactcacattaatttaaaccaataagagagtgaatgttaaagagag 10666714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 17568696 - 17568768
Alignment:
Q  27 gaggaatgctagcaacattcacttttcaacactctctttagcactcactcatttattgaatggaataaatgta 99  Q
    ||||||||||||||||| || ||||| | |||||||  |||||| ||||| ||||||| ||| ||| ||||||    
T  17568696 gaggaatgctagcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgta 17568768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 27843 - 27991
Alignment:
Q  61 tctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaaaccaa 160  Q
    |||||||||||||| | ||||||| ||||||| ||||||||||| ||||||||||| || ||| || | ||||||||| |||||||||||||||||||||    
T  27843 tctttagcactcacgcttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaa 27942  T
Q  161 taaaagagtgaataataaagagagcgttc-aaagagagtgttggtagca 208  Q
    ||| ||||||| || ||||||||| |||| |||||| |||||| |||||    
T  27943 taagagagtgagtattaaagagagtgttcaaaagagggtgttgctagca 27991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 27016 - 26902
Alignment:
Q  56 cactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatttaa 155  Q
    ||||||||||| |||||||||  |||||| |   ||| ||||||||| | ||||||||||| || |||||| ||||||| ||| ||||| |||| |||||    
T  27016 cactctctttaacactcactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaa 26917  T
Q  156 accaataaaagagtg 170  Q
    |||||||||||||||    
T  26916 accaataaaagagtg 26902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 9687 - 9797
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    ||||||||||| || ||||||||  ||||||| ||| ||| ||||||| ||| |||| |||||| || |||||| || |||||||| || |||||| |||    
T  9687 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatt 9786  T
Q  153 taaaccaataa 163  Q
    ||||| |||||    
T  9787 taaacgaataa 9797  T

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Target: scaffold0492 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 11233 - 11343
Alignment:
Q  53 caacactctctttagcactcactcatttattgaatggaataaatgtatgtcctaccactttgtggggcttcaatattcaaagtgtaaacccacaatgatt 152  Q
    ||||||||||| || ||||||||  ||||||| ||| ||| ||||||| ||| |||| |||||| || |||||| || |||||||| || |||||| |||    
T  11233 caacactctctctaacactcacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatt 11332  T
Q  153 taaaccaataa 163  Q
    ||||| |||||    
T  11333 taaacgaataa 11343  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 8489 - 8413
Alignment:
Q  132 aagtgtaaacccacaatgatttaaaccaataaaagagtgaataataaagagagcgttc-aaagagagtgttggtagc 207  Q
    ||||||| || || |||||||||||||||||||||| | | || |||||||||  ||| ||||||||||||| ||||    
T  8489 aagtgtagactcataatgatttaaaccaataaaagaattagtattaaagagagtattcaaaagagagtgttgttagc 8413  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 43016 - 42944
Alignment:
Q  121 ttcaatattcaaagtgtaaacccacaatgatttaaa-ccaataaaagagtgaataataaagagagcgttcaaa 192  Q
    |||||| || ||||| ||||| || ||||||||||| ||||||||||||| |||| |||||||| | ||||||    
T  43016 ttcaattttaaaagtataaactcaaaatgatttaaaaccaataaaagagttaatattaaagagaacattcaaa 42944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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