View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3117_high_79 (Length: 204)
Name: NF3117_high_79
Description: NF3117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3117_high_79 |
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Alignment Details
Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 3293635 - 3293804
Alignment:
| Q |
18 |
atccaagtatagtactataagataagattaaaaagtgcatcatattgtatattgtccaataaccatatcatgatcagaatcgaatctggtaataaaaaca |
117 |
Q |
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| T |
3293635 |
atccaagtatagtactataagataagattaaaaagtgcatcatattgtatattgtccaataaccatatcatgatcagaatcgaatctggtaataaaaaca |
3293734 |
T |
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| Q |
118 |
ctaaacatttgttaggaaaccgcgtcttcttcaatgtttccttaaaacaggcactaacatgtaaacttgg |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3293735 |
ctaaacatttgttaggaaaccgcgtcttcttcaatgtttccttaaaacaggcactaacatgtaaacttgg |
3293804 |
T |
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