View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3117_low_7 (Length: 738)

Name: NF3117_low_7
Description: NF3117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3117_low_7
NF3117_low_7
[»] chr6 (5 HSPs)
chr6 (18-694)||(2386108-2386783)
chr6 (180-228)||(24333044-24333092)
chr6 (186-227)||(3525236-3525277)
chr6 (184-225)||(4308887-4308928)
chr6 (188-225)||(31776191-31776228)
[»] chr2 (6 HSPs)
chr2 (184-226)||(37276854-37276896)
chr2 (184-225)||(37419586-37419627)
chr2 (184-226)||(1830149-1830191)
chr2 (180-226)||(15370241-15370287)
chr2 (187-224)||(40059381-40059418)
chr2 (187-224)||(40085281-40085318)
[»] chr4 (8 HSPs)
chr4 (194-227)||(28615454-28615487)
chr4 (184-227)||(679401-679444)
chr4 (180-227)||(41433481-41433528)
chr4 (182-225)||(53034718-53034761)
chr4 (184-226)||(22662169-22662211)
chr4 (184-226)||(22666648-22666690)
chr4 (186-227)||(27043747-27043788)
chr4 (192-225)||(52428782-52428815)
[»] chr3 (4 HSPs)
chr3 (186-227)||(25447162-25447203)
chr3 (186-227)||(36507009-36507050)
chr3 (185-227)||(47903997-47904039)
chr3 (186-223)||(26911703-26911740)
[»] chr8 (2 HSPs)
chr8 (180-223)||(39551130-39551173)
chr8 (194-227)||(10727464-10727497)
[»] chr7 (4 HSPs)
chr7 (180-227)||(28691753-28691800)
chr7 (180-227)||(41040271-41040318)
chr7 (186-223)||(9210933-9210970)
chr7 (186-227)||(37064385-37064426)
[»] chr5 (3 HSPs)
chr5 (176-223)||(18286893-18286940)
chr5 (184-226)||(3280654-3280696)
chr5 (186-227)||(32197845-32197886)
[»] chr1 (4 HSPs)
chr1 (180-219)||(4200340-4200379)
chr1 (176-226)||(37241739-37241788)
chr1 (184-225)||(6292602-6292643)
chr1 (194-227)||(30013996-30014029)


Alignment Details
Target: chr6 (Bit Score: 641; Significance: 0; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 641; E-Value: 0
Query Start/End: Original strand, 18 - 694
Target Start/End: Complemental strand, 2386783 - 2386108
Alignment:
Q  18 cacgacacagacactgacacaacgacaatgctactaatttgagaaacacacaattcatataagatgttatcataagctagtccttgagggcttatgaaag 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386783 cacgacacagacactgacacaacgacaatgctactaatttgagaaacacacaattcatataagatgttatcataagctagtccttgagggcttatgaaag 2386684  T
Q  118 taagctgaaaactacacatggatattttttaagctgtttctgtatattctcaaaaaggctcgcaaatgcttatatcagtagataaacttaaataagtcaa 217  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||||||||    
T  2386683 taagctgaaaactacgaatggacattttttaagctgtttctgtatattctcaaaaaggctcgcaaatgctgtt-tctgtagataaacttaaataagtcaa 2386585  T
Q  218 tccaaacagaaagttactgttaatttgaatattcaactttttcttcactagttattgacattttttcttgtgttttcttcctatagggacttgcagcatt 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386584 tccaaacagaaagttactgttaatttgaatattcaactttttcttcactagttattgacattttttcttgtgttttcttcctatagggacttgcagcatt 2386485  T
Q  318 gacaacaacagccctagcaagatcatggcatcacaaaaacagatcaatgtcatcttcatttctttcattatctctctatttaatctcattaggccaaggt 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386484 gacaacaacagccctagcaagatcatggcatcacaaaaacagatcaatgtcatcttcatttctttcattatctctctatttaatctcattaggccaaggt 2386385  T
Q  418 ggatataatccatctctacaagcctttggagctgatcaacttggtgaagatgaagaactaccttgtagtaacacagatgatacaagtagcaacaaaaaag 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386384 ggatataatccatctctacaagcctttggagctgatcaacttggtgaagatgaagaactaccttgtagtaacacagatgatacaagtagcaacaaaaaag 2386285  T
Q  518 cacttttctttcaatggtggtattttggtgtttgtgctggaagcctaatgggtgtaacagtcatgtcttacatccaagatacatttggttgggtaatagg 617  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386284 cacttttctttcaatggtggtattttggtgtttgtgctggaagcctaatgggtgtaacagtcatgtcttacatccaagatacatttggttgggtaatagg 2386185  T
Q  618 gtttgctatacctgcgatttcgatgcttctttctatcttgattttctctagtggaagctctatatattcgtataaag 694  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2386184 gtttgcgatacctgcgatttcgatgcttctttctatcttgattttctctagtggaagctctatatattcgtataaag 2386108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 24333044 - 24333092
Alignment:
Q  180 caaatgcttatatcagtagataaacttaaataagtcaatccaaacagaa 228  Q
    ||||||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  24333044 caaatgcttatgtcagtacataaactgaaatatgtcaatccaaacagaa 24333092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 3525236 - 3525277
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||    
T  3525236 cttatgtcactagataaacttaaattagtcaatccaaacaga 3525277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 4308887 - 4308928
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaaca 225  Q
    ||||||| |||||||||||||| ||||||| |||||||||||    
T  4308887 tgcttatgtcagtagataaactcaaataagccaatccaaaca 4308928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 31776228 - 31776191
Alignment:
Q  188 tatatcagtagataaacttaaataagtcaatccaaaca 225  Q
    ||||||||||||||| || |||||||||||||||||||    
T  31776228 tatatcagtagataagctcaaataagtcaatccaaaca 31776191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 37276854 - 37276896
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaacag 226  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  37276854 tgcttatattagtagataaacttaaataagtcgatccaaacag 37276896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 37419627 - 37419586
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaaca 225  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  37419627 tgcttatataagtagataaactcaaataagtcaatccaaaca 37419586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 1830149 - 1830191
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaacag 226  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||    
T  1830149 tgcttatgtcagtaaataaactcaaataagtcaatccaaacag 1830191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 15370287 - 15370241
Alignment:
Q  180 caaatgcttatatcagtagataaacttaaataagtcaatccaaacag 226  Q
    |||||||||||  |||||||||| || ||||||||||||||||||||    
T  15370287 caaatgcttatgccagtagataagctcaaataagtcaatccaaacag 15370241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 40059418 - 40059381
Alignment:
Q  187 ttatatcagtagataaacttaaataagtcaatccaaac 224  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaac 40059381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 40085318 - 40085281
Alignment:
Q  187 ttatatcagtagataaacttaaataagtcaatccaaac 224  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaac 40085281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 28615454 - 28615487
Alignment:
Q  194 agtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||||||||||||||||||||||||||||||||    
T  28615454 agtagataaacttaaataagtcaatccaaacaga 28615487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 679401 - 679444
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||    
T  679401 tgcttataccagtagataaactcaaataagtcaattcaaacaga 679444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 41433481 - 41433528
Alignment:
Q  180 caaatgcttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||||||||| |||| ||||||||| |||||||||||| ||||||||    
T  41433481 caaatgcttatgtcaggagataaactcaaataagtcaattcaaacaga 41433528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 53034761 - 53034718
Alignment:
Q  182 aatgcttatatcagtagataaacttaaataagtcaatccaaaca 225  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  53034761 aatgcttatatcagtagataagctcaaataagtcaaaccaaaca 53034718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 22662211 - 22662169
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaacag 226  Q
    ||||||| | |||||||||||| ||||||||||||||||||||    
T  22662211 tgcttatgttagtagataaactcaaataagtcaatccaaacag 22662169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 22666690 - 22666648
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaacag 226  Q
    ||||||| | |||||||||||| ||||||||||||||||||||    
T  22666690 tgcttatgttagtagataaactcaaataagtcaatccaaacag 22666648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 27043788 - 27043747
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||| ||||||||||| || |||||||||||||||||||||    
T  27043788 cttatgtcagtagataagctcaaataagtcaatccaaacaga 27043747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 52428782 - 52428815
Alignment:
Q  192 tcagtagataaacttaaataagtcaatccaaaca 225  Q
    |||||||||||||| |||||||||||||||||||    
T  52428782 tcagtagataaactcaaataagtcaatccaaaca 52428815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 25447203 - 25447162
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  25447203 cttatgtcagtagataaactcaaataagtcaatccaaacaga 25447162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 36507050 - 36507009
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  36507050 cttatatcagtagataaactcaaataagccaatccaaacaga 36507009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 47904039 - 47903997
Alignment:
Q  185 gcttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    |||||||||||  |||||||| |||||||||||||||||||||    
T  47904039 gcttatatcagaggataaactcaaataagtcaatccaaacaga 47903997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 26911703 - 26911740
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaa 223  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  26911703 cttatgtcagtagataaactcaaataagtcaatccaaa 26911740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 39551173 - 39551130
Alignment:
Q  180 caaatgcttatatcagtagataaacttaaataagtcaatccaaa 223  Q
    |||||||||||||| |||||||| || |||||||||||||||||    
T  39551173 caaatgcttatatccgtagataatctcaaataagtcaatccaaa 39551130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 10727464 - 10727497
Alignment:
Q  194 agtagataaacttaaataagtcaatccaaacaga 227  Q
    |||||||||||| |||||||||||||||||||||    
T  10727464 agtagataaactcaaataagtcaatccaaacaga 10727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 28691800 - 28691753
Alignment:
Q  180 caaatgcttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||||    
T  28691800 caaatgcttatgttagcagataaactcaaataagtcaatccaaacaga 28691753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 41040271 - 41040318
Alignment:
Q  180 caaatgcttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||| |||||||||||||||||||| |||||| ||||| ||||||||    
T  41040271 caaatacttatatcagtagataaactcaaataaatcaattcaaacaga 41040318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 9210933 - 9210970
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaa 223  Q
    ||||||||||||||||| || |||||||||||||||||    
T  9210933 cttatatcagtagataagctcaaataagtcaatccaaa 9210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 37064426 - 37064385
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  37064426 cttatatcagtagataagatcaaataagtcaatccaaacaga 37064385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 18286893 - 18286940
Alignment:
Q  176 ctcgcaaatgcttatatcagtagataaacttaaataagtcaatccaaa 223  Q
    ||||||||||||||||| ||||||||||||  ||||| ||||||||||    
T  18286893 ctcgcaaatgcttatattagtagataaactcgaataattcaatccaaa 18286940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 3280696 - 3280654
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaacag 226  Q
    |||||| ||||||||||||  ||||||||||||||||||||||    
T  3280696 tgcttaaatcagtagataagtttaaataagtcaatccaaacag 3280654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 32197845 - 32197886
Alignment:
Q  186 cttatatcagtagataaacttaaataagtcaatccaaacaga 227  Q
    ||||| |||||||||||||| ||| |||||||||||||||||    
T  32197845 cttatgtcagtagataaactcaaaaaagtcaatccaaacaga 32197886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 4200340 - 4200379
Alignment:
Q  180 caaatgcttatatcagtagataaacttaaataagtcaatc 219  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  4200340 caaatgcttatatcagtatataaactaaaataagtcaatc 4200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 37241788 - 37241739
Alignment:
Q  176 ctcgcaaatgcttatatcagtagataaacttaaataagtcaatccaaacag 226  Q
    ||||||| |||||||  |||||||||| |||||||||||||||||||||||    
T  37241788 ctcgcaagtgcttatg-cagtagataagcttaaataagtcaatccaaacag 37241739  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 6292602 - 6292643
Alignment:
Q  184 tgcttatatcagtagataaacttaaataagtcaatccaaaca 225  Q
    ||||||| ||||||||||| || |||||||||||||||||||    
T  6292602 tgcttatgtcagtagataagctcaaataagtcaatccaaaca 6292643  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 30014029 - 30013996
Alignment:
Q  194 agtagataaacttaaataagtcaatccaaacaga 227  Q
    |||||||||||| |||||||||||||||||||||    
T  30014029 agtagataaactcaaataagtcaatccaaacaga 30013996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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