View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3117_low_77 (Length: 219)

Name: NF3117_low_77
Description: NF3117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3117_low_77
NF3117_low_77
[»] chr8 (54 HSPs)
chr8 (7-219)||(34404884-34405101)
chr8 (178-219)||(2161530-2161571)
chr8 (177-219)||(39024850-39024892)
chr8 (182-219)||(3306053-3306090)
chr8 (182-219)||(10129246-10129283)
chr8 (180-217)||(15198896-15198933)
chr8 (182-219)||(18567414-18567451)
chr8 (182-219)||(26682211-26682248)
chr8 (182-219)||(27874679-27874716)
chr8 (182-219)||(28014856-28014893)
chr8 (178-219)||(40225981-40226022)
chr8 (184-219)||(13496709-13496744)
chr8 (184-219)||(22838368-22838403)
chr8 (184-219)||(38212944-38212979)
chr8 (181-219)||(5573429-5573467)
chr8 (185-219)||(13327942-13327976)
chr8 (183-217)||(39701802-39701836)
chr8 (182-219)||(1203744-1203781)
chr8 (182-219)||(6818160-6818197)
chr8 (182-219)||(7140457-7140494)
chr8 (182-219)||(8284566-8284603)
chr8 (182-219)||(9801811-9801848)
chr8 (178-219)||(11946914-11946955)
chr8 (182-219)||(14816124-14816161)
chr8 (182-219)||(14829579-14829616)
chr8 (182-219)||(14961661-14961698)
chr8 (182-219)||(26363988-26364025)
chr8 (182-219)||(31812256-31812293)
chr8 (182-219)||(43717550-43717587)
chr8 (183-219)||(12189587-12189623)
chr8 (183-219)||(12434015-12434051)
chr8 (179-218)||(10543772-10543811)
chr8 (180-219)||(12958643-12958682)
chr8 (182-217)||(19343834-19343869)
chr8 (179-218)||(42781618-42781657)
chr8 (185-219)||(4080395-4080429)
chr8 (185-219)||(4084544-4084578)
chr8 (185-219)||(4102851-4102885)
chr8 (184-218)||(31263043-31263077)
chr8 (185-218)||(42195-42228)
chr8 (182-219)||(9580107-9580144)
chr8 (185-218)||(10543630-10543663)
chr8 (182-219)||(12132126-12132163)
chr8 (185-218)||(16586723-16586756)
chr8 (185-218)||(16586865-16586898)
chr8 (182-219)||(26834704-26834741)
chr8 (182-219)||(35678273-35678310)
chr8 (182-219)||(38843847-38843884)
chr8 (185-218)||(42781476-42781509)
chr8 (182-219)||(45006112-45006149)
chr8 (182-218)||(29642747-29642783)
chr8 (171-219)||(31812100-31812148)
chr8 (182-218)||(32089464-32089500)
chr8 (191-219)||(36967077-36967105)
[»] chr7 (45 HSPs)
chr7 (172-219)||(33072124-33072171)
chr7 (178-219)||(39757104-39757145)
chr7 (179-219)||(3561873-3561913)
chr7 (180-219)||(820537-820576)
chr7 (180-219)||(33343131-33343170)
chr7 (180-219)||(34270404-34270443)
chr7 (182-219)||(4969916-4969953)
chr7 (176-217)||(5833500-5833541)
chr7 (182-219)||(9332104-9332141)
chr7 (182-219)||(32117957-32117994)
chr7 (182-219)||(46290153-46290190)
chr7 (181-217)||(47457458-47457494)
chr7 (176-219)||(18102223-18102265)
chr7 (180-219)||(23982751-23982790)
chr7 (184-219)||(25709399-25709434)
chr7 (185-219)||(26050462-26050496)
chr7 (185-219)||(26059821-26059855)
chr7 (182-219)||(7040250-7040287)
chr7 (182-219)||(7170145-7170182)
chr7 (182-219)||(19889483-19889520)
chr7 (182-219)||(24462953-24462990)
chr7 (177-218)||(38798351-38798392)
chr7 (179-219)||(5909277-5909317)
chr7 (185-217)||(7899487-7899519)
chr7 (183-219)||(8091311-8091347)
chr7 (183-219)||(22041725-22041761)
chr7 (183-219)||(36548459-36548495)
chr7 (184-219)||(8595040-8595075)
chr7 (184-219)||(29398134-29398169)
chr7 (184-219)||(29692540-29692575)
chr7 (179-218)||(42593389-42593428)
chr7 (184-219)||(45501602-45501637)
chr7 (177-219)||(384424-384465)
chr7 (183-217)||(6587931-6587965)
chr7 (182-212)||(12085929-12085959)
chr7 (180-218)||(28061466-28061504)
chr7 (180-218)||(38798066-38798104)
chr7 (183-213)||(44807048-44807078)
chr7 (180-218)||(45645511-45645549)
chr7 (186-219)||(26037236-26037269)
chr7 (178-219)||(36032537-36032578)
chr7 (186-219)||(41331458-41331491)
chr7 (185-218)||(42593537-42593570)
chr7 (180-216)||(425566-425602)
chr7 (185-217)||(28061324-28061356)
[»] chr4 (45 HSPs)
chr4 (177-219)||(35999940-35999982)
chr4 (176-219)||(47326884-47326927)
chr4 (176-219)||(47341680-47341723)
chr4 (177-219)||(51691484-51691526)
chr4 (178-219)||(4779430-4779471)
chr4 (178-219)||(16667378-16667419)
chr4 (178-219)||(17409967-17410008)
chr4 (182-219)||(18882265-18882302)
chr4 (182-219)||(27362534-27362571)
chr4 (182-219)||(54495635-54495672)
chr4 (183-219)||(29190815-29190851)
chr4 (180-219)||(9759138-9759177)
chr4 (180-219)||(19450896-19450935)
chr4 (180-219)||(49228797-49228836)
chr4 (176-218)||(32459324-32459366)
chr4 (181-219)||(49181215-49181253)
chr4 (182-219)||(3085813-3085850)
chr4 (180-217)||(4329739-4329776)
chr4 (178-219)||(13214410-13214451)
chr4 (182-219)||(19468337-19468374)
chr4 (182-219)||(23051380-23051417)
chr4 (184-217)||(23545621-23545654)
chr4 (180-217)||(33632199-33632236)
chr4 (182-219)||(39876973-39877010)
chr4 (182-219)||(40049701-40049738)
chr4 (186-219)||(42479894-42479927)
chr4 (182-219)||(50352445-50352482)
chr4 (185-217)||(23553715-23553747)
chr4 (187-219)||(24684980-24685012)
chr4 (179-219)||(34941421-34941461)
chr4 (177-217)||(46803944-46803984)
chr4 (182-213)||(20098619-20098650)
chr4 (182-217)||(27019405-27019440)
chr4 (179-218)||(41887712-41887751)
chr4 (182-217)||(44916641-44916676)
chr4 (184-219)||(53961465-53961500)
chr4 (185-219)||(52391441-52391475)
chr4 (169-219)||(53376393-53376443)
chr4 (182-219)||(8736809-8736846)
chr4 (182-215)||(23438302-23438335)
chr4 (185-218)||(32459474-32459507)
chr4 (185-218)||(41887570-41887603)
chr4 (177-217)||(19838684-19838724)
chr4 (185-213)||(20098610-20098638)
chr4 (186-214)||(35645014-35645042)
[»] chr6 (35 HSPs)
chr6 (178-219)||(34692497-34692538)
chr6 (180-219)||(3853086-3853125)
chr6 (180-219)||(14228122-14228161)
chr6 (182-219)||(17552585-17552622)
chr6 (182-219)||(28943767-28943804)
chr6 (179-219)||(2830676-2830716)
chr6 (183-219)||(29863301-29863337)
chr6 (173-217)||(31568254-31568298)
chr6 (184-219)||(10887172-10887207)
chr6 (180-219)||(18332684-18332723)
chr6 (184-219)||(24979149-24979184)
chr6 (183-218)||(28470001-28470036)
chr6 (182-219)||(13391818-13391855)
chr6 (180-217)||(31169759-31169796)
chr6 (185-217)||(6017001-6017033)
chr6 (179-219)||(17596484-17596524)
chr6 (178-218)||(31503737-31503777)
chr6 (183-219)||(32614943-32614979)
chr6 (182-217)||(3261223-3261258)
chr6 (188-219)||(20979115-20979146)
chr6 (184-219)||(22284750-22284785)
chr6 (184-219)||(27819627-27819662)
chr6 (182-213)||(28247140-28247171)
chr6 (184-219)||(30591163-30591198)
chr6 (180-219)||(31069578-31069617)
chr6 (182-217)||(33017869-33017904)
chr6 (183-217)||(29065424-29065458)
chr6 (183-217)||(29120277-29120311)
chr6 (182-219)||(8467796-8467833)
chr6 (185-218)||(28469859-28469892)
chr6 (184-217)||(29074438-29074471)
chr6 (184-217)||(29079202-29079235)
chr6 (184-217)||(29107011-29107044)
chr6 (185-218)||(34733702-34733735)
chr6 (185-218)||(34733844-34733877)
[»] chr5 (33 HSPs)
chr5 (178-219)||(2795666-2795707)
chr5 (177-219)||(3398363-3398405)
chr5 (182-219)||(4047555-4047592)
chr5 (182-219)||(30839924-30839961)
chr5 (182-219)||(36597722-36597759)
chr5 (182-217)||(6863701-6863736)
chr5 (184-219)||(32019984-32020019)
chr5 (176-218)||(12332481-12332523)
chr5 (179-217)||(13515921-13515959)
chr5 (182-219)||(8103578-8103615)
chr5 (182-219)||(11636874-11636911)
chr5 (186-219)||(30893772-30893805)
chr5 (173-218)||(31705073-31705118)
chr5 (183-219)||(29766310-29766346)
chr5 (184-219)||(12641993-12642028)
chr5 (176-219)||(14466486-14466529)
chr5 (180-219)||(29855893-29855932)
chr5 (184-219)||(31365950-31365985)
chr5 (180-218)||(40454205-40454243)
chr5 (185-219)||(41350345-41350379)
chr5 (182-216)||(42239598-42239632)
chr5 (185-218)||(12332339-12332372)
chr5 (185-218)||(13761672-13761705)
chr5 (184-217)||(15240950-15240983)
chr5 (184-217)||(19743247-19743280)
chr5 (185-218)||(31613150-31613183)
chr5 (185-218)||(31613292-31613325)
chr5 (185-218)||(31704931-31704964)
chr5 (176-209)||(34333175-34333208)
chr5 (184-217)||(35469699-35469732)
chr5 (185-218)||(40454063-40454096)
chr5 (184-217)||(40980518-40980551)
chr5 (185-217)||(34578156-34578188)
[»] chr1 (42 HSPs)
chr1 (179-219)||(38812883-38812923)
chr1 (180-219)||(313892-313931)
chr1 (180-219)||(34802110-34802149)
chr1 (181-219)||(6569982-6570020)
chr1 (182-219)||(1502718-1502755)
chr1 (182-219)||(6180329-6180366)
chr1 (182-219)||(23576412-23576449)
chr1 (182-219)||(25465301-25465338)
chr1 (182-219)||(30172022-30172059)
chr1 (182-219)||(30187563-30187600)
chr1 (182-219)||(35512868-35512905)
chr1 (184-219)||(23591841-23591876)
chr1 (172-219)||(39150315-39150362)
chr1 (182-217)||(39310784-39310819)
chr1 (185-219)||(5875216-5875250)
chr1 (181-219)||(6754614-6754652)
chr1 (185-219)||(35438858-35438892)
chr1 (181-219)||(36490922-36490960)
chr1 (185-219)||(41676561-41676595)
chr1 (182-219)||(6307645-6307682)
chr1 (182-219)||(44918167-44918204)
chr1 (182-219)||(51382457-51382494)
chr1 (184-217)||(51920431-51920464)
chr1 (183-219)||(5879102-5879138)
chr1 (183-219)||(13322019-13322055)
chr1 (183-219)||(30288863-30288899)
chr1 (181-213)||(30362992-30363024)
chr1 (182-217)||(3168066-3168101)
chr1 (176-219)||(22167478-22167521)
chr1 (185-219)||(9516724-9516758)
chr1 (185-219)||(13241900-13241934)
chr1 (182-212)||(17919603-17919633)
chr1 (179-217)||(39781486-39781524)
chr1 (176-213)||(3096358-3096395)
chr1 (185-218)||(9661898-9661931)
chr1 (185-218)||(9662040-9662073)
chr1 (182-219)||(41624972-41625009)
chr1 (185-218)||(42589174-42589207)
chr1 (185-218)||(42589316-42589349)
chr1 (185-218)||(44012927-44012960)
chr1 (185-218)||(44013069-44013102)
chr1 (183-219)||(10896496-10896532)
[»] scaffold0061 (1 HSPs)
scaffold0061 (180-219)||(52775-52814)
[»] scaffold0017 (1 HSPs)
scaffold0017 (180-219)||(145820-145859)
[»] chr3 (38 HSPs)
chr3 (181-219)||(3863472-3863510)
chr3 (182-219)||(2571411-2571448)
chr3 (182-219)||(10307909-10307946)
chr3 (182-219)||(23523089-23523126)
chr3 (178-219)||(33474467-33474508)
chr3 (182-219)||(38389590-38389627)
chr3 (177-214)||(38757852-38757889)
chr3 (182-219)||(50204546-50204583)
chr3 (182-219)||(51618190-51618227)
chr3 (179-219)||(29686463-29686503)
chr3 (180-219)||(8165789-8165828)
chr3 (184-219)||(40930194-40930229)
chr3 (182-219)||(11611119-11611156)
chr3 (182-219)||(16875023-16875060)
chr3 (185-218)||(51567821-51567854)
chr3 (182-217)||(12515472-12515507)
chr3 (184-219)||(20938200-20938235)
chr3 (184-219)||(35414809-35414844)
chr3 (180-219)||(40497190-40497229)
chr3 (185-219)||(31318784-31318818)
chr3 (181-219)||(32553509-32553547)
chr3 (185-219)||(42180195-42180229)
chr3 (185-219)||(46845144-46845178)
chr3 (185-219)||(54527707-54527741)
chr3 (183-216)||(2566628-2566661)
chr3 (178-219)||(15269154-15269195)
chr3 (182-219)||(25633141-25633178)
chr3 (185-218)||(29932353-29932386)
chr3 (185-218)||(29932495-29932528)
chr3 (185-218)||(29981507-29981540)
chr3 (185-218)||(29981649-29981682)
chr3 (182-219)||(45983649-45983686)
chr3 (182-219)||(51401583-51401620)
chr3 (182-218)||(13495292-13495328)
chr3 (187-219)||(23803049-23803081)
chr3 (185-217)||(27549689-27549721)
chr3 (183-219)||(36426408-36426444)
chr3 (185-217)||(54016169-54016201)
[»] scaffold0111 (1 HSPs)
scaffold0111 (182-219)||(37112-37149)
[»] chr2 (45 HSPs)
chr2 (178-219)||(5853457-5853498)
chr2 (182-219)||(6109532-6109569)
chr2 (182-219)||(8065266-8065303)
chr2 (182-219)||(16126557-16126594)
chr2 (178-219)||(16493526-16493567)
chr2 (182-219)||(24729575-24729612)
chr2 (182-219)||(29157827-29157864)
chr2 (182-219)||(38248418-38248455)
chr2 (182-219)||(43388479-43388516)
chr2 (184-219)||(11660894-11660929)
chr2 (176-219)||(22704680-22704723)
chr2 (181-219)||(9747460-9747498)
chr2 (182-219)||(5583556-5583593)
chr2 (182-219)||(7757784-7757821)
chr2 (182-219)||(9450400-9450437)
chr2 (182-219)||(12016809-12016846)
chr2 (186-219)||(19228568-19228601)
chr2 (186-219)||(26003348-26003381)
chr2 (182-219)||(27665042-27665079)
chr2 (179-219)||(15231974-15232014)
chr2 (178-218)||(43941997-43942037)
chr2 (181-216)||(14707009-14707044)
chr2 (184-219)||(20566017-20566052)
chr2 (178-217)||(43806505-43806544)
chr2 (184-219)||(45062341-45062376)
chr2 (185-219)||(8770887-8770921)
chr2 (185-219)||(16123421-16123455)
chr2 (182-216)||(25295851-25295885)
chr2 (185-219)||(34213950-34213984)
chr2 (185-218)||(3286497-3286530)
chr2 (185-218)||(3286639-3286672)
chr2 (185-218)||(3951252-3951285)
chr2 (185-218)||(3951394-3951427)
chr2 (182-219)||(4576324-4576361)
chr2 (182-219)||(4821419-4821456)
chr2 (184-217)||(7720260-7720293)
chr2 (185-218)||(8847931-8847964)
chr2 (184-217)||(9047893-9047926)
chr2 (186-219)||(15411624-15411657)
chr2 (182-219)||(17265547-17265584)
chr2 (182-215)||(29142221-29142254)
chr2 (182-219)||(34817888-34817925)
chr2 (182-219)||(36731323-36731360)
chr2 (185-218)||(43941855-43941888)
chr2 (186-218)||(8847790-8847822)
[»] scaffold0011 (1 HSPs)
scaffold0011 (183-219)||(13228-13264)
[»] scaffold0073 (1 HSPs)
scaffold0073 (182-219)||(16533-16570)
[»] scaffold0727 (1 HSPs)
scaffold0727 (185-217)||(5836-5868)
[»] scaffold0038 (1 HSPs)
scaffold0038 (182-213)||(47302-47333)
[»] scaffold0036 (1 HSPs)
scaffold0036 (184-219)||(94018-94053)
[»] scaffold0155 (1 HSPs)
scaffold0155 (181-219)||(3410-3448)
[»] scaffold0128 (1 HSPs)
scaffold0128 (183-217)||(44293-44327)
[»] scaffold0136 (1 HSPs)
scaffold0136 (186-219)||(1445-1478)
[»] scaffold0018 (1 HSPs)
scaffold0018 (182-219)||(182185-182222)


Alignment Details
Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 34404884 - 34405101
Alignment:
Q  7 tcgaagaatattacactggggccataaaacgcaaacaacatatcaatcagcaagaatacaaacaaaatcctaagattcattacactagaggaatactaaa 106  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34404884 tcgaaaaatattacactggggccataaaacgcaaacaacgtatcaatcagcaagaatacaaacaaaatcctaagattcattagactagaggaatactaaa 34404983  T
Q  107 ctagtgaatgaaatgtatattttgatagtgatgattataacnnnnnnnc-aaaccgcaaaggttcctttcatatatgggtttttctatcatgtgcaaatt 205  Q
    |||||||||||||||||||||||||||||||||||||||||       | |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34404984 ctagtgaatgaaatgtatattttgatagtgatgattataacaaaaaaaccaaactgcaaaggttcctttcatatatgggtttttctatcatgtgcaaatt 34405083  T
Q  206 t----gcacatgttaaga 219  Q
    |    |||||||||||||    
T  34405084 tatttgcacatgttaaga 34405101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 2161571 - 2161530
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2161571 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 2161530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 39024850 - 39024892
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  39024850 tatatgggtttttctatcatgtgcaaatttgcacatgataaga 39024892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 3306053 - 3306090
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3306053 gggtttttctatcatgtgcaaatttgcacatgttaaga 3306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 10129283 - 10129246
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10129283 gggtttttctatcatgtgcaaatttgcacatgttaaga 10129246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 15198896 - 15198933
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15198896 atgggtttttctatcatgtgcaaatttgcacatgttaa 15198933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 18567414 - 18567451
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18567414 gggtttttctatcatgtgcaaatttgcacatgttaaga 18567451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 26682248 - 26682211
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26682248 gggtttttctatcatgtgcaaatttgcacatgttaaga 26682211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 27874679 - 27874716
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27874679 gggtttttctatcatgtgcaaatttgcacatgttaaga 27874716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 28014856 - 28014893
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28014856 gggtttttctatcatgtgcaaatttgcacatgttaaga 28014893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 40225981 - 40226022
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  40225981 atatgagtttttctatcatgtgcaaatttgcacatgttaaga 40226022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 13496709 - 13496744
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaaga 13496744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 22838403 - 22838368
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  22838403 gtttttctatcatgtgcaaatttgcacatgttaaga 22838368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 38212944 - 38212979
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaaga 38212979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 5573467 - 5573429
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  5573467 tgggtttttctatcatgtgcaaatttgtacatgttaaga 5573429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 13327942 - 13327976
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaaga 13327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 39701802 - 39701836
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||||||||    
T  39701802 ggtttttctatcatgtgcaaatttgcacatgttaa 39701836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 1203781 - 1203744
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  1203781 gggtttttctatcatgtgcaaatttgcacatgataaga 1203744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 6818197 - 6818160
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||| |||||||||||    
T  6818197 gggtttttctatcatgtgcaaatttgtacatgttaaga 6818160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 7140457 - 7140494
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  7140457 gggtttttctatcatgtgcaaatttgcacatattaaga 7140494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 8284566 - 8284603
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8284566 gggtttttctatcatgtgcaaatttgtacatgttaaga 8284603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 9801848 - 9801811
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  9801848 gggtttttcaatcatgtgcaaatttgcacatgttaaga 9801811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 11946914 - 11946955
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  11946914 atatggatttttctatcatgtgtaaatttgcacatgttaaga 11946955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 14816124 - 14816161
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  14816124 gggtttttctatcatgtgcaaatttgcacatgataaga 14816161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 14829616 - 14829579
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  14829616 gggtttttctatcatgtgcaaatttgcacatgataaga 14829579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 14961661 - 14961698
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  14961661 gggtttttctatcatgtgcaaatttgcacatgctaaga 14961698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 26363988 - 26364025
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  26363988 gggtttttctatcatgtgcaaatttgcgcatgttaaga 26364025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 31812293 - 31812256
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  31812293 gggtttttctatcatgtgcaaatttgcacatattaaga 31812256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 43717550 - 43717587
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  43717550 gggtttttctatcatgtgcaaatttacacatgttaaga 43717587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 12189587 - 12189623
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12189587 ggtttttctatcatgtgcaaatttgcacatgataaga 12189623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 12434015 - 12434051
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12434015 ggtttttctatcatgtgcaaatttgcacatgataaga 12434051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 10543811 - 10543772
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  10543811 tatggatttttctaacatgtgcaaatttgcacatgttaag 10543772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 12958682 - 12958643
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  12958682 atgggtttttctatcatgtgcaaatttgtacatattaaga 12958643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 19343834 - 19343869
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||| |||||||||||||||||||||||||||    
T  19343834 gggtttttttatcatgtgcaaatttgcacatgttaa 19343869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 42781657 - 42781618
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  42781657 tatggatttttctaacatgtgcaaatttgcacatgttaag 42781618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 4080395 - 4080429
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||| |||||    
T  4080395 tttttctatcatgtgcaaatttgcacatgataaga 4080429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 4084544 - 4084578
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||| |||||    
T  4084544 tttttctatcatgtgcaaatttgcacatgataaga 4084578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 4102851 - 4102885
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||| |||||    
T  4102851 tttttctatcatgtgcaaatttgcacatgataaga 4102885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 31263077 - 31263043
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||||||||||| |||||||||||||||||||||    
T  31263077 gtttttctatcatatgcaaatttgcacatgttaag 31263043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 42195 - 42228
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  42195 tttttctaacatgtgcaaatttgcacatgttaag 42228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 9580107 - 9580144
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  9580107 gggtttttttatcatgtgcaaatttacacatgttaaga 9580144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 10543630 - 10543663
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  10543630 tttttctaacatgtgcaaatttgcacatgttaag 10543663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 12132163 - 12132126
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  12132163 gggtttttctatcatctgcaaacttgcacatgttaaga 12132126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 16586723 - 16586756
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  16586723 tttttctaacatgtgcaaatttgcacatgttaag 16586756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 16586898 - 16586865
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  16586898 tttttctaacatgtgcaaatttgcacatgttaag 16586865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 26834741 - 26834704
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||| || ||||||    
T  26834741 gggtttttctatcatgtgcaaatttgcatatattaaga 26834704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 35678273 - 35678310
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  35678273 gggtttttttatcatgtgcaaatttgcacatgataaga 35678310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 38843884 - 38843847
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  38843884 gggtttttctatcatgtgtaaatttgcacatgctaaga 38843847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 42781476 - 42781509
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  42781476 tttttctaacatgtgcaaatttgcacatgttaag 42781509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 45006149 - 45006112
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||  |||||||||||||||||||||    
T  45006149 gggtttttctatcataagcaaatttgcacatgttaaga 45006112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Complemental strand, 29642783 - 29642747
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  29642783 gggtttttctatcatgtgcaaatttgcatatgataag 29642747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 31812100 - 31812148
Alignment:
Q  171 ctttcatatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||| ||||||||| |||| |||||||||  |||||||||||||||    
T  31812100 ctttcatgtatgggtttgtctaacatgtgcaacattgcacatgttaaga 31812148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 32089464 - 32089500
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||||||| || |||||||||||||||||||||    
T  32089464 gggtttttctattatatgcaaatttgcacatgttaag 32089500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 36967077 - 36967105
Alignment:
Q  191 tatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||    
T  36967077 tatcatgtgcaaatttgcacatgttaaga 36967105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 33072171 - 33072124
Alignment:
Q  172 tttcatatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  33072171 tttcatatatgggtttttctatcatgtgcaaatttgtacatgttaaga 33072124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 39757104 - 39757145
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39757104 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 39757145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 3561873 - 3561913
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3561873 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 3561913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 820537 - 820576
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  820537 atgggtttttctatcatgtgcaaatttgcacatgttaaga 820576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 33343170 - 33343131
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33343170 atgggtttttctatcatgtgcaaatttgcacatgttaaga 33343131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 34270443 - 34270404
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34270443 atgggtttttctatcatgtgcaaatttgcacatgttaaga 34270404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 4969953 - 4969916
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4969953 gggtttttctatcatgtgcaaatttgcacatgttaaga 4969916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 5833541 - 5833500
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  5833541 atatatggatttttctatcatgtgcaaatttgcacatgttaa 5833500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 9332141 - 9332104
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9332141 gggtttttctatcatgtgcaaatttgcacatgttaaga 9332104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 32117994 - 32117957
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32117994 gggtttttctatcatgtgcaaatttgcacatgttaaga 32117957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 46290190 - 46290153
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46290190 gggtttttctatcatgtgcaaatttgcacatgttaaga 46290153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 47457458 - 47457494
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||||||||||    
T  47457458 tgggtttttctatcatgtgcaaatttgcacatgttaa 47457494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 18102223 - 18102265
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  18102223 atatatgggtttt-ctatcatgtgcaaatttgcacatgttaaga 18102265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 23982751 - 23982790
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  23982751 atgggtttttctatcatgtgcaaatttgcacacgttaaga 23982790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 25709399 - 25709434
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  25709399 gtttttctatcatgtgcaaatttgcacatgttaaga 25709434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 26050462 - 26050496
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||    
T  26050462 tttttctatcatgtgcaaatttgcacatgttaaga 26050496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 26059821 - 26059855
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||    
T  26059821 tttttctatcatgtgcaaatttgcacatgttaaga 26059855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 7040250 - 7040287
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||| |||||||||||||||||||||||||||||    
T  7040250 gggtttttatatcatgtgcaaatttgcacatgttaaga 7040287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 7170182 - 7170145
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  7170182 gggtttttctatcatgtgcaaatttgcacatgataaga 7170145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 19889520 - 19889483
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  19889520 gggtttttctatcatgtgcaaatttgcacatgataaga 19889483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 24462953 - 24462990
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| |||||||||||||||||||||||||||||||||    
T  24462953 gggtatttctatcatgtgcaaatttgcacatgttaaga 24462990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 38798392 - 38798351
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  38798392 tatatggatttttctaacatgtgcaaatttgcacatgttaag 38798351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 5909277 - 5909317
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  5909277 tatgggtttttctatcatgtgtaaatttgcacatgataaga 5909317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 7899487 - 7899519
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaa 7899519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 8091311 - 8091347
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8091311 ggtttttctatcatgtgcaaatttacacatgttaaga 8091347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 22041725 - 22041761
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||| ||||||||    
T  22041725 ggtttttctatcatgtgcaaatttgcacttgttaaga 22041761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 36548459 - 36548495
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||| |||||||||||||||||||||||||||||    
T  36548459 ggtttttttatcatgtgcaaatttgcacatgttaaga 36548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 8595075 - 8595040
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8595075 gtttttctatcatgtgcaaatttacacatgttaaga 8595040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 29398134 - 29398169
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaaga 29398169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 29692540 - 29692575
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||| |||||||||||    
T  29692540 gtttttctatcatgtgcaaatttgtacatgttaaga 29692575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 42593389 - 42593428
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  42593389 tatggatttttctaacatgtgcaaatttgcacatgttaag 42593428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 45501637 - 45501602
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaaga 45501602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 384424 - 384465
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  384424 tatatgagtttttctatcat-tgcaaatttgcacatgttaaga 384465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 6587965 - 6587931
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||| ||||    
T  6587965 ggtttttctatcatgtgcaaatttgcacatattaa 6587931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 12085929 - 12085959
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacat 212  Q
    |||||||||||||||||||||||||||||||    
T  12085929 gggtttttctatcatgtgcaaatttgcacat 12085959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 28061504 - 28061466
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  28061504 atggatttttctaacatgtgcaaatttgcacatgttaag 28061466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Original strand, 38798066 - 38798104
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  38798066 atggatttttctaacatgtgcaaatttgcacatgttaag 38798104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 213
Target Start/End: Complemental strand, 44807078 - 44807048
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatg 213  Q
    |||||||||||||||||||||||||||||||    
T  44807078 ggtttttctatcatgtgcaaatttgcacatg 44807048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 45645549 - 45645511
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  45645549 atggatttttctaacatgtgcaaatttgcacatgttaag 45645511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 26037269 - 26037236
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||| |||||||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaaga 26037236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 36032537 - 36032578
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||| ||||| |||||| ||||||||||||    
T  36032537 atatgggtttttctattatgtgaaaattttcacatgttaaga 36032578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 41331458 - 41331491
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||| |||||    
T  41331458 ttttctatcatgtgcaaatttgcacatgataaga 41331491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 42593570 - 42593537
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  42593570 tttttctaacatgtgcaaatttgcacatgttaag 42593537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 425602 - 425566
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgtta 216  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  425602 atgggtttttctatcatgtgcaaacttgcatatgtta 425566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 28061324 - 28061356
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||| ||||||||||||||||||||||||    
T  28061324 tttttctaacatgtgcaaatttgcacatgttaa 28061356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 35999940 - 35999982
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35999940 tatatgggtttttctatcatgtgcaaatttgcacatgttaaga 35999982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 47326884 - 47326927
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  47326884 atatatgagtttttctatcatgtgcaaatttgcacatgttaaga 47326927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 47341680 - 47341723
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  47341680 atatatgagtttttctatcatgtgcaaatttgcacatgttaaga 47341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 51691526 - 51691484
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  51691526 tatatgggtttttctatcatgtgtaaatttgcacatgttaaga 51691484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 4779430 - 4779471
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  4779430 atatgagtttttctatcatgtgcaaatttgcacatgttaaga 4779471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 16667378 - 16667419
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  16667378 atatggatttttctatcatgtgcaaatttgcacatgttaaga 16667419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 17410008 - 17409967
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  17410008 atatgggtttttctatcatgtgcaaatttgcacatgataaga 17409967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 18882265 - 18882302
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18882265 gggtttttctatcatgtgcaaatttgcacatgttaaga 18882302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 27362571 - 27362534
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27362571 gggtttttctatcatgtgcaaatttgcacatgttaaga 27362534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 54495635 - 54495672
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  54495635 gggtttttctatcatgtgcaaatttgcacatgttaaga 54495672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 29190815 - 29190851
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  29190815 ggtttttctatcatgtgcaaatttgcacatgttaaga 29190851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 9759138 - 9759177
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  9759138 atgggtttttctatcatgtacaaatttgcacatgttaaga 9759177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 19450896 - 19450935
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  19450896 atgggtttttctattatgtgcaaatttgcacatgttaaga 19450935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 49228836 - 49228797
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  49228836 atgggtttttctatcatgtgcaaatttgcacgtgttaaga 49228797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 32459324 - 32459366
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  32459324 atatatggatttttctaacatgtgcaaatttgcacatgttaag 32459366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 49181253 - 49181215
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  49181253 tgggtttttctatcatgtgcaaatttgcacctgttaaga 49181215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 3085850 - 3085813
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  3085850 gggtttttctatcatgtgcaaatttgcacattttaaga 3085813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 4329776 - 4329739
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4329776 atgggtttttctatcatgtgcaaatttgcatatgttaa 4329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 13214410 - 13214451
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  13214410 atattggtttttctattatgtgcaaatttgcacatgttaaga 13214451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 19468374 - 19468337
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||| |||||||||||||||||||||||||    
T  19468374 gggtttttctattatgtgcaaatttgcacatgttaaga 19468337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 23051380 - 23051417
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  23051380 gggtttttctatcatgtgcaaatttgcacatgataaga 23051417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 23545654 - 23545621
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||||||||||    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaa 23545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 33632199 - 33632236
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  33632199 atgggtttttctatcatgtgcgaatttgcacatgttaa 33632236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 39877010 - 39876973
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||| |||||||||||||||||||    
T  39877010 gggtttttctatcatgtgtaaatttgcacatgttaaga 39876973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 40049738 - 40049701
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||| |||||||||||||||||||||||||    
T  40049738 gggtttttctattatgtgcaaatttgcacatgttaaga 40049701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 42479894 - 42479927
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||    
T  42479894 ttttctatcatgtgcaaatttgcacatgttaaga 42479927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 50352482 - 50352445
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  50352482 gggtttttctatcatatgcaaatttgcacatgttaaga 50352445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 23553747 - 23553715
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||||||    
T  23553747 tttttctatcatgtgcaaatttgcacatgttaa 23553715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 219
Target Start/End: Complemental strand, 24685012 - 24684980
Alignment:
Q  187 tttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaaga 24684980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 34941461 - 34941421
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  34941461 tatgggtttttctatcatgtgcgaatttgcacatgataaga 34941421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 46803984 - 46803944
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  46803984 tatatgagtttttctatcatgtgcaaatttgcacatattaa 46803944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 213
Target Start/End: Complemental strand, 20098650 - 20098619
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatg 213  Q
    ||||||||||||||||||||||||||||||||    
T  20098650 gggtttttctatcatgtgcaaatttgcacatg 20098619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 27019440 - 27019405
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||| |||||||    
T  27019440 gggtttttctatcatgtgcaaatttgcatatgttaa 27019405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 41887751 - 41887712
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  41887751 tatggatttttctaacatgtgcaaatttgcacatgttaag 41887712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 44916641 - 44916676
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||||||| ||||    
T  44916641 gggtttttctatcatgtgcaaatttgcacatattaa 44916676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 53961500 - 53961465
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||| ||||||||||||||||||||||||    
T  53961500 gtttttctatcgtgtgcaaatttgcacatgttaaga 53961465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 52391475 - 52391441
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaaga 52391441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 53376393 - 53376443
Alignment:
Q  169 tcctttcatatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||| | ||| |||||||| ||||||||| |||||||||||||||||||    
T  53376393 tcctttaaaataagggtttttttatcatgtgaaaatttgcacatgttaaga 53376443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 8736809 - 8736846
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  8736809 gggtttttctatcgtgtgtaaatttgcacatgttaaga 8736846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 23438335 - 23438302
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgtt 215  Q
    |||||||||||| |||||||||||||||||||||    
T  23438335 gggtttttctattatgtgcaaatttgcacatgtt 23438302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 32459507 - 32459474
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  32459507 tttttctaacatgtgcaaatttgcacatgttaag 32459474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 41887570 - 41887603
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  41887570 tttttctaacatgtgcaaatttgcacatgttaag 41887603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 19838684 - 19838724
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||| |||||| ||||||||| |||||||||||||||||    
T  19838684 tatatgagtttttttatcatgtgaaaatttgcacatgttaa 19838724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 213
Target Start/End: Original strand, 20098610 - 20098638
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatg 213  Q
    |||||||||||||||||||||||||||||    
T  20098610 tttttctatcatgtgcaaatttgcacatg 20098638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 214
Target Start/End: Original strand, 35645014 - 35645042
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgt 214  Q
    |||||||||||||||||||||||||||||    
T  35645014 ttttctatcatgtgcaaatttgcacatgt 35645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 34692538 - 34692497
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34692538 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 34692497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 3853125 - 3853086
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3853125 atgggtttttctatcatgtgcaaatttgcacatgttaaga 3853086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 14228122 - 14228161
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14228122 atgggtttttctatcatgtgcaaatttgcacatgttaaga 14228161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 17552585 - 17552622
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17552585 gggtttttctatcatgtgcaaatttgcacatgttaaga 17552622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 28943767 - 28943804
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28943767 gggtttttctatcatgtgcaaatttgcacatgttaaga 28943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 2830676 - 2830716
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  2830676 tatgggtttttctatcatgtacaaatttgcacatgttaaga 2830716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 29863301 - 29863337
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  29863301 ggtttttctatcatgtgcaaatttgcacatgttaaga 29863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 31568298 - 31568254
Alignment:
Q  173 ttcatatatgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||    
T  31568298 ttcatttataggtttttctatcatgtgcaaatttgcacatgttaa 31568254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 10887207 - 10887172
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaaga 10887172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 18332684 - 18332723
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  18332684 atgggtttttctatcatgtgcaaattttcacatgttaaga 18332723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 24979149 - 24979184
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  24979149 gtttttctatcatgtgcaaatttgcacatgttaaga 24979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 218
Target Start/End: Complemental strand, 28470036 - 28470001
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  28470036 ggtttttctatcatgtgcaaatttgcacatgttaag 28470001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 13391855 - 13391818
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  13391855 gggtttttctatcatgtgcaaatttgcgcatgttaaga 13391818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 31169759 - 31169796
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||| |||||||||||||||||    
T  31169759 atgggtttttctatcatgtgtaaatttgcacatgttaa 31169796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 6017033 - 6017001
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||||||    
T  6017033 tttttctatcatgtgcaaatttgcacatgttaa 6017001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 17596524 - 17596484
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||| ||||| |||||    
T  17596524 tatgggtttttctatcatgtgcaaatttgtacatgataaga 17596484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 31503737 - 31503777
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  31503737 atatggatttttctaacatgtgcaaatttgcacatgttaag 31503777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 32614943 - 32614979
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||| ||||||||||||||||||||    
T  32614943 ggtttttctatcatgtacaaatttgcacatgttaaga 32614979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 3261258 - 3261223
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||| ||||||||||    
T  3261258 gggtttttctatcatgtgcaaatttacacatgttaa 3261223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 219
Target Start/End: Complemental strand, 20979146 - 20979115
Alignment:
Q  188 ttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||    
T  20979146 ttctatcatgtgcaaatttgcacatgttaaga 20979115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 22284785 - 22284750
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22284785 gtttttctatcatgtgcaaatttgcacatgtcaaga 22284750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 27819627 - 27819662
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| ||||||||||||||||||||    
T  27819627 gtttttctatcatgtacaaatttgcacatgttaaga 27819662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 28247140 - 28247171
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatg 213  Q
    ||||||||||||||||||||||||||||||||    
T  28247140 gggtttttctatcatgtgcaaatttgcacatg 28247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 30591163 - 30591198
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||| ||||||||||||    
T  30591163 gtttttctatcatgtgcaaatttacacatgttaaga 30591198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 31069578 - 31069617
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  31069578 atggatttttctatcatgtgcaaatttacacatgttaaga 31069617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 33017904 - 33017869
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||| |||||||||||||||||||||||    
T  33017904 gggtttttctattatgtgcaaatttgcacatgttaa 33017869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 29065424 - 29065458
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||| |||||||||||||    
T  29065424 ggtttttctatcatgtgcaaacttgcacatgttaa 29065458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 29120277 - 29120311
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||| |||||||||||||    
T  29120277 ggtttttctatcatgtgcaaacttgcacatgttaa 29120311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 8467833 - 8467796
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  8467833 gggtttttctatcatatgcaaatttgtacatgttaaga 8467796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 28469859 - 28469892
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  28469859 tttttctaacatgtgcaaatttgcacatgttaag 28469892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 29074438 - 29074471
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||| |||||||||||||    
T  29074438 gtttttctatcatgtgcaaacttgcacatgttaa 29074471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 29079202 - 29079235
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||| |||||||||||||    
T  29079202 gtttttctatcatgtgcaaacttgcacatgttaa 29079235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 29107011 - 29107044
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||| |||||||||||||    
T  29107011 gtttttctatcatgtgcaaacttgcacatgttaa 29107044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 34733702 - 34733735
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  34733702 tttttctaacatgtgcaaatttgcacatgttaag 34733735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 34733877 - 34733844
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  34733877 tttttctaacatgtgcaaatttgcacatgttaag 34733844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 2795707 - 2795666
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2795707 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 2795666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 3398405 - 3398363
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  3398405 tataagggtttttctatcatgtgcaaatttgcacatgttaaga 3398363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 4047592 - 4047555
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4047592 gggtttttctatcatgtgcaaatttgcacatgttaaga 4047555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 30839961 - 30839924
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30839961 gggtttttctatcatgtgcaaatttgcacatgttaaga 30839924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 36597759 - 36597722
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36597759 gggtttttctatcatgtgcaaatttgcacatgttaaga 36597722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 217
Target Start/End: Complemental strand, 6863736 - 6863701
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||||||||||||    
T  6863736 gggtttttctatcatgtgcaaatttgcacatgttaa 6863701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 32019984 - 32020019
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  32019984 gtttttctatcatgtgcaaatttgcacatgttaaga 32020019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 12332523 - 12332481
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  12332523 atatatggatttttctaacatgtgcaaatttgcacatgttaag 12332481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 13515921 - 13515959
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  13515921 tatgggtttttctatcatgtgtaaatttgcacatgttaa 13515959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 8103578 - 8103615
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  8103578 gggtttttctatcatgtgcaaatttgcacatgataaga 8103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 11636911 - 11636874
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  11636911 gggtttttctatcatgtgcaaatttgcacatgataaga 11636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 30893805 - 30893772
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaaga 30893772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 31705118 - 31705073
Alignment:
Q  173 ttcatatatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||    
T  31705118 ttcatttatggatttttctaacatgtgcaaatttgcacatgttaag 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 29766346 - 29766310
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||| ||||||||||||||||    
T  29766346 ggtttttctatcatgtgcaagtttgcacatgttaaga 29766310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 12641993 - 12642028
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||| |||||||||||||||||||||||||    
T  12641993 gtttttctataatgtgcaaatttgcacatgttaaga 12642028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 14466486 - 14466529
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||| ||||||||||||||||||||||  |||||||||||    
T  14466486 atatatggatttttctatcatgtgcaaatttagacatgttaaga 14466529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 29855893 - 29855932
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  29855893 atggatttttctatcatgtgtaaatttgcacatgttaaga 29855932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 31365950 - 31365985
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||| |||||||||||    
T  31365950 gtttttctatcatgtgcaaatttgtacatgttaaga 31365985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 40454243 - 40454205
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  40454243 atggatttttctaacatgtgcaaatttgcacatgttaag 40454205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 41350379 - 41350345
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| |||||||||||||||||||||||||||||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaaga 41350345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 42239632 - 42239598
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgtta 216  Q
    ||||||||||||||||||||||||||| |||||||    
T  42239632 gggtttttctatcatgtgcaaatttgcgcatgtta 42239598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 12332339 - 12332372
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  12332339 tttttctaacatgtgcaaatttgcacatgttaag 12332372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 13761672 - 13761705
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  13761672 tttttctaacatgtgcaaatttgcacatgttaag 13761705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 15240950 - 15240983
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||| |||||||||    
T  15240950 gtttttctatcatgtgcaaatttgtacatgttaa 15240983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 19743247 - 19743280
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||| |||||||||    
T  19743247 gtttttctatcatgtgcaaatttgtacatgttaa 19743280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 31613150 - 31613183
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  31613150 tttttctaacatgtgcaaatttgcacatgttaag 31613183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 31613325 - 31613292
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  31613325 tttttctaacatgtgcaaatttgcacatgttaag 31613292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 31704931 - 31704964
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  31704931 tttttctaacatgtgcaaatttgcacatgttaag 31704964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 34333175 - 34333208
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgca 209  Q
    ||||| ||||||||||||||||||||||||||||    
T  34333175 atataagggtttttctatcatgtgcaaatttgca 34333208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 35469732 - 35469699
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||| |||||||||||||||||    
T  35469732 gtttttctatcatgtgtaaatttgcacatgttaa 35469699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 40454063 - 40454096
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  40454063 tttttctaacatgtgcaaatttgcacatgttaag 40454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 40980551 - 40980518
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||||| ||||    
T  40980551 gtttttctatcatgtgcaaatttgcacatattaa 40980518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 34578188 - 34578156
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||| |||||||||||||||||||||||||||    
T  34578188 tttttttatcatgtgcaaatttgcacatgttaa 34578156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 38812923 - 38812883
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38812923 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 38812883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 313931 - 313892
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  313931 atgggtttttctatcatgtgcaaatttgcacatgttaaga 313892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 34802149 - 34802110
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34802149 atgggtttttctatcatgtgcaaatttgcacatgttaaga 34802110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 6569982 - 6570020
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6569982 tgggtttttctatcatgtgcaaatttgcacatgttaaga 6570020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 1502718 - 1502755
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1502718 gggtttttctatcatgtgcaaatttgcacatgttaaga 1502755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 6180366 - 6180329
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6180366 gggtttttctatcatgtgcaaatttgcacatgttaaga 6180329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 23576412 - 23576449
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23576412 gggtttttctatcatgtgcaaatttgcacatgttaaga 23576449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 25465338 - 25465301
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25465338 gggtttttctatcatgtgcaaatttgcacatgttaaga 25465301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 30172059 - 30172022
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30172059 gggtttttctatcatgtgcaaatttgcacatgttaaga 30172022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 30187600 - 30187563
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30187600 gggtttttctatcatgtgcaaatttgcacatgttaaga 30187563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 35512905 - 35512868
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35512905 gggtttttctatcatgtgcaaatttgcacatgttaaga 35512868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 23591876 - 23591841
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  23591876 gtttttctatcatgtgcaaatttgcacatgttaaga 23591841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 39150315 - 39150362
Alignment:
Q  172 tttcatatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| |||| |||||||||||||||||||||||||||||||| |||||    
T  39150315 tttcttataagggtttttctatcatgtgcaaatttgcacatgataaga 39150362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 39310784 - 39310819
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||||||||||||    
T  39310784 gggtttttctatcatgtgcaaatttgcacatgttaa 39310819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 5875216 - 5875250
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||    
T  5875216 tttttctatcatgtgcaaatttgcacatgttaaga 5875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 6754652 - 6754614
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  6754652 tgggtttttctatcatgtgcaaatttgcacatgataaga 6754614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 35438892 - 35438858
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaaga 35438858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 36490960 - 36490922
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  36490960 tgggtttttctatcatgagcaaatttgcacatgttaaga 36490922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 41676561 - 41676595
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||    
T  41676561 tttttctatcatgtgcaaatttgcacatgttaaga 41676595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 6307682 - 6307645
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||| |||||||||||||||||||||||||||||    
T  6307682 gggtttttatatcatgtgcaaatttgcacatgttaaga 6307645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 44918204 - 44918167
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  44918204 gggtttttctatcatgtgcaaatttacacatgttaaga 44918167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 51382494 - 51382457
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  51382494 gggtttttctatcatgtgcaactttgcacatgttaaga 51382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 51920431 - 51920464
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||||||||||    
T  51920431 gtttttctatcatgtgcaaatttgcacatgttaa 51920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 5879102 - 5879138
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5879102 ggtttttctatcatgtgtaaatttgcacatgttaaga 5879138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 13322055 - 13322019
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13322055 ggtttttctatcatgtgcaaatttgcatatgttaaga 13322019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 30288863 - 30288899
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||| ||||||||||||    
T  30288863 ggtttttctatcatgtgcaaatttacacatgttaaga 30288899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 30362992 - 30363024
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatg 213  Q
    |||||||||||||||||||||||||||||||||    
T  30362992 tgggtttttctatcatgtgcaaatttgcacatg 30363024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 3168066 - 3168101
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||| |||||    
T  3168066 gggtttttctatcatgtgcaaatttgcacacgttaa 3168101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 22167521 - 22167478
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||    
T  22167521 atataagggttttcctatcatgtgcaaatttgcacatgataaga 22167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 9516758 - 9516724
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  9516758 tttttctatcatgtgtaaatttgcacatgttaaga 9516724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 13241934 - 13241900
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  13241934 tttttctatcatgtgaaaatttgcacatgttaaga 13241900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Complemental strand, 17919633 - 17919603
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacat 212  Q
    |||||||||||||||||||||||||||||||    
T  17919633 gggtttttctatcatgtgcaaatttgcacat 17919603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 39781524 - 39781486
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  39781524 tatgggattttctatcatgtgcatatttgcacatgttaa 39781486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 3096395 - 3096358
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatg 213  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  3096395 atataagggtttttctattatgtgcaaatttgcacatg 3096358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 9661898 - 9661931
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  9661898 tttttctaacatgtgcaaatttgcacatgttaag 9661931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 9662073 - 9662040
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  9662073 tttttctaacatgtgcaaatttgcacatgttaag 9662040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 41625009 - 41624972
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  41625009 gggtttttctatcatgtgcaaatttgcatatgataaga 41624972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 42589174 - 42589207
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  42589174 tttttctaacatgtgcaaatttgcacatgttaag 42589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 42589349 - 42589316
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  42589349 tttttctaacatgtgcaaatttgcacatgttaag 42589316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 44012927 - 44012960
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  44012927 tttttctaacatgtgcaaatttgcacatgttaag 44012960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 44013102 - 44013069
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  44013102 tttttctaacatgtgcaaatttgcacatgttaag 44013069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 10896532 - 10896496
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  10896532 ggtttttctatcatgtgtaaaattgcacatgttaaga 10896496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 52775 - 52814
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  52775 atgggtttttctatcatgtgcaaatttgcacatgttaaga 52814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 145859 - 145820
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  145859 atgggtttttctatcatgtgcaaatttgcacatgttaaga 145820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 3863510 - 3863472
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3863510 tgggtttttctatcatgtgcaaatttgcacatgttaaga 3863472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 2571448 - 2571411
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2571448 gggtttttctatcatgtgcaaatttgcacatgttaaga 2571411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 10307946 - 10307909
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10307946 gggtttttctatcatgtgcaaatttgcacatgttaaga 10307909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 23523126 - 23523089
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23523126 gggtttttctatcatgtgcaaatttgcacatgttaaga 23523089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 33474467 - 33474508
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  33474467 atatgagtttttctatcatgtgcaaatttgcacatgttaaga 33474508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 38389627 - 38389590
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38389627 gggtttttctatcatgtgcaaatttgcacatgttaaga 38389590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 38757889 - 38757852
Alignment:
Q  177 tatatgggtttttctatcatgtgcaaatttgcacatgt 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38757889 tatatgggtttttctatcatgtgcaaatttgcacatgt 38757852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 50204583 - 50204546
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50204583 gggtttttctatcatgtgcaaatttgcacatgttaaga 50204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 51618227 - 51618190
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51618227 gggtttttctatcatgtgcaaatttgcacatgttaaga 51618190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 29686503 - 29686463
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  29686503 tatgggtttttctatcatgtgcaaatttgcacatgataaga 29686463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 8165828 - 8165789
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  8165828 atggatttttctatcatgtgcaaatttgcacatgttaaga 8165789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 40930229 - 40930194
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  40930229 gtttttctatcatgtgcaaatttgcacatgttaaga 40930194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 11611156 - 11611119
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  11611156 gggtttttctatcatgtgcaaatttgcacatgataaga 11611119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 16875023 - 16875060
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  16875023 gggtttttctatcgtgtgcaaatttgcacatgttaaga 16875060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 51567821 - 51567854
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||||||||||||||||||||||||||||||||    
T  51567821 tttttctatcatgtgcaaatttgcacatgttaag 51567854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 12515472 - 12515507
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||| |||||||||||||||||    
T  12515472 gggtttttctatcatgtgtaaatttgcacatgttaa 12515507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 20938235 - 20938200
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||| |||||    
T  20938235 gtttttctatcatgtgcaaatttgcacatgataaga 20938200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 35414809 - 35414844
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||| ||||||||||||    
T  35414809 gtttttctatcatgtgcaaatttacacatgttaaga 35414844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Complemental strand, 40497229 - 40497190
Alignment:
Q  180 atgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  40497229 atggatttttctatcatgtgcaaatttgcacatgataaga 40497190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 31318818 - 31318784
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  31318818 tttttctatcatgtgaaaatttgcacatgttaaga 31318784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 32553547 - 32553509
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  32553547 tgggtttttctatcatgtgtaaatttacacatgttaaga 32553509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 42180229 - 42180195
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||| |||||||||||||||||||    
T  42180229 tttttctatcatgtgtaaatttgcacatgttaaga 42180195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 46845144 - 46845178
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||| |||||||||||    
T  46845144 tttttctatcatgtgcaaatttgtacatgttaaga 46845178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 54527707 - 54527741
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||| |||||||||||||||||||||||||    
T  54527707 tttttctattatgtgcaaatttgcacatgttaaga 54527741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 2566661 - 2566628
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgtta 216  Q
    |||||||||||||||||||||||| |||||||||    
T  2566661 ggtttttctatcatgtgcaaatttacacatgtta 2566628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 15269154 - 15269195
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| ||||||||||||| || |||||||||||||||||||    
T  15269154 atatgagtttttctatcatatgtaaatttgcacatgttaaga 15269195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 25633178 - 25633141
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||| || ||||||||    
T  25633178 gggtttttctatcatgtgcaaatttgaacttgttaaga 25633141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 29932353 - 29932386
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  29932353 tttttctaacatgtgcaaatttgcacatgttaag 29932386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 29932528 - 29932495
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  29932528 tttttctaacatgtgcaaatttgcacatgttaag 29932495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 29981507 - 29981540
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  29981507 tttttctaacatgtgcaaatttgcacatgttaag 29981540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 29981682 - 29981649
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  29981682 tttttctaacatgtgcaaatttgcacatgttaag 29981649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 45983686 - 45983649
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  45983686 gggtttttttatcatgtgcaaatttgcacaggttaaga 45983649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 51401620 - 51401583
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  51401620 gggtttttctattatgtacaaatttgcacatgttaaga 51401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 13495292 - 13495328
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||| |||| |||||||||||||||||||||||||    
T  13495292 gggtttgtctaacatgtgcaaatttgcacatgttaag 13495328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 219
Target Start/End: Original strand, 23803049 - 23803081
Alignment:
Q  187 tttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||| ||||||||||||||||||||||    
T  23803049 tttctatcatatgcaaatttgcacatgttaaga 23803081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 27549721 - 27549689
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||| |||||||||||||||||||||||    
T  27549721 tttttctattatgtgcaaatttgcacatgttaa 27549689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 36426408 - 36426444
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  36426408 ggtttttctatcatgtgtaaatttacacatgttaaga 36426444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 54016169 - 54016201
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||| ||||    
T  54016169 tttttctatcatgtgcaaatttgcacattttaa 54016201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 37112 - 37149
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37112 gggtttttctatcatgtgcaaatttgcacatgttaaga 37149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 5853457 - 5853498
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  5853457 atatgagtttttctatcatgtgcaaatttgcacatgttaaga 5853498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 6109569 - 6109532
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  6109569 gggtttttctatcatgtgcaaatttgcacatgttaaga 6109532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 8065303 - 8065266
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8065303 gggtttttctatcatgtgcaaatttgcacatgttaaga 8065266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 16126557 - 16126594
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16126557 gggtttttctatcatgtgcaaatttgcacatgttaaga 16126594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 16493526 - 16493567
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  16493526 atatgagtttttctatcatgtgcaaatttgcacatgttaaga 16493567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 24729575 - 24729612
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24729575 gggtttttctatcatgtgcaaatttgcacatgttaaga 24729612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 29157827 - 29157864
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29157827 gggtttttctatcatgtgcaaatttgcacatgttaaga 29157864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 38248418 - 38248455
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38248418 gggtttttctatcatgtgcaaatttgcacatgttaaga 38248455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 43388479 - 43388516
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43388479 gggtttttctatcatgtgcaaatttgcacatgttaaga 43388516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 11660894 - 11660929
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||||    
T  11660894 gtttttctatcatgtgcaaatttgcacatgttaaga 11660929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 22704723 - 22704680
Alignment:
Q  176 atatatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  22704723 atatatgagtttttctatcatgtgcaaatttgcacatcttaaga 22704680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 9747498 - 9747460
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  9747498 tgggtttttctatcatgtgcaaattttcacatgttaaga 9747460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 5583556 - 5583593
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5583556 gggtttttctatcatgcgcaaatttgcacatgttaaga 5583593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 7757784 - 7757821
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  7757784 gggtttttctatcatgtgcaaatttacacatgttaaga 7757821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 9450437 - 9450400
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9450437 gggtttttctatcatgtgcaaatctgcacatgttaaga 9450400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 12016846 - 12016809
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  12016846 gggtttttctatcatgtgcaaatttgcacatattaaga 12016809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 19228601 - 19228568
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaaga 19228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 26003348 - 26003381
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||||||||    
T  26003348 ttttctatcatgtgcaaatttgcacatgttaaga 26003381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 27665042 - 27665079
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||| |||||    
T  27665042 gggtttttctatcatgtgcaaatttgcacatgataaga 27665079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 15232014 - 15231974
Alignment:
Q  179 tatgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  15232014 tatgagtttttctattatgtgcaaatttgcacatgttaaga 15231974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 43942037 - 43941997
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  43942037 atatggatttttctaacatgtgcaaatttgcacatgttaag 43941997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 14707009 - 14707044
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgtta 216  Q
    |||||||||||||||||||||||||| |||||||||    
T  14707009 tgggtttttctatcatgtgcaaatttacacatgtta 14707044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 20566017 - 20566052
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||| ||||||||||||    
T  20566017 gtttttctatcatgtgcaaatttacacatgttaaga 20566052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 43806544 - 43806505
Alignment:
Q  178 atatgggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  43806544 atatgggtttttctatcgtgtgtaaatttgcacatgttaa 43806505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 45062376 - 45062341
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45062376 gtttttctatcatgtgcaaatttgcacatattaaga 45062341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 8770887 - 8770921
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||| |||||||||||||||||||||||||||||    
T  8770887 tttttttatcatgtgcaaatttgcacatgttaaga 8770921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 16123455 - 16123421
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||||||||||||| |||||    
T  16123455 tttttctatcatgtgcaaatttgcacatgataaga 16123421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 25295851 - 25295885
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgtta 216  Q
    ||||||||||||||| |||||||||||||||||||    
T  25295851 gggtttttctatcatttgcaaatttgcacatgtta 25295885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Original strand, 34213950 - 34213984
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||| ||||||||||||||||||||||||    
T  34213950 tttttctatcgtgtgcaaatttgcacatgttaaga 34213984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 3286497 - 3286530
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  3286497 tttttctaacatgtgcaaatttgcacatgttaag 3286530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 3286672 - 3286639
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  3286672 tttttctaacatgtgcaaatttgcacatgttaag 3286639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 3951252 - 3951285
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  3951252 tttttctaacatgtgcaaatttgcacatgttaag 3951285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 3951427 - 3951394
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  3951427 tttttctaacatgtgcaaatttgcacatgttaag 3951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 4576324 - 4576361
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  4576324 gggtttttctatcatgtgcaaattcgcatatgttaaga 4576361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 4821456 - 4821419
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  4821456 gggtttttctattatgtgcaaatttgcacatgataaga 4821419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Complemental strand, 7720293 - 7720260
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||||||||||||||||||||||| ||||||    
T  7720293 gtttttctatcatgtgcaaatttgcacgtgttaa 7720260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Complemental strand, 8847964 - 8847931
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  8847964 tttttctaacatgtgcaaatttgcacatgttaag 8847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 217
Target Start/End: Original strand, 9047893 - 9047926
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    ||||||| ||||||||||||||||||||||||||    
T  9047893 gtttttccatcatgtgcaaatttgcacatgttaa 9047926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 15411624 - 15411657
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||| ||||||||||||||||||||||||||    
T  15411624 ttttctaacatgtgcaaatttgcacatgttaaga 15411657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 17265584 - 17265547
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  17265584 gggtttttctatcatgtccaaatttgcacttgttaaga 17265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 29142254 - 29142221
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgtt 215  Q
    ||||||||||||||||||||||||| ||||||||    
T  29142254 gggtttttctatcatgtgcaaatttacacatgtt 29142221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 34817925 - 34817888
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||| || ||||||||||||    
T  34817925 gggtttttctatcatgtgcaaacttacacatgttaaga 34817888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 36731360 - 36731323
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  36731360 gggtttttctatcatgtgtaaatttacacatgttaaga 36731323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 43941855 - 43941888
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaag 218  Q
    |||||||| |||||||||||||||||||||||||    
T  43941855 tttttctaacatgtgcaaatttgcacatgttaag 43941888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 8847790 - 8847822
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaag 218  Q
    ||||||| |||||||||||||||||||||||||    
T  8847790 ttttctaacatgtgcaaatttgcacatgttaag 8847822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 13264 - 13228
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  13264 ggtttttctatcatgtgcaaatttgcacatgttaaga 13228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 16533 - 16570
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||| |||||||||||||||||||||||||||||    
T  16533 gggtttttatatcatgtgcaaatttgcacatgttaaga 16570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 5868 - 5836
Alignment:
Q  185 tttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||||||    
T  5868 tttttctatcatgtgcaaatttgcacatgttaa 5836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 213
Target Start/End: Original strand, 47302 - 47333
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatg 213  Q
    ||||||||||||||||||||||||||||||||    
T  47302 gggtttttctatcatgtgcaaatttgcacatg 47333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Original strand, 94018 - 94053
Alignment:
Q  184 gtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||||||||||| |||||||||    
T  94018 gtttttctatcatgtgcaaatttgcatatgttaaga 94053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 3410 - 3448
Alignment:
Q  181 tgggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  3410 tgggtttttctatcatgtgtaaatttgcacatattaaga 3448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 44293 - 44327
Alignment:
Q  183 ggtttttctatcatgtgcaaatttgcacatgttaa 217  Q
    |||||||||||||||||||||||||||||| ||||    
T  44293 ggtttttctatcatgtgcaaatttgcacatattaa 44327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 1445 - 1478
Alignment:
Q  186 ttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||| |||||||||||||||||||||||||||||    
T  1445 ttttttatcatgtgcaaatttgcacatgttaaga 1478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 182222 - 182185
Alignment:
Q  182 gggtttttctatcatgtgcaaatttgcacatgttaaga 219  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  182222 gggtttttctatcatgtgtaaatttgtacatgttaaga 182185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University