View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3118_high_4 (Length: 463)

Name: NF3118_high_4
Description: NF3118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3118_high_4
NF3118_high_4
[»] chr8 (42 HSPs)
chr8 (298-448)||(17124314-17124465)
chr8 (298-449)||(14400361-14400514)
chr8 (298-448)||(25261328-25261478)
chr8 (298-451)||(16227659-16227812)
chr8 (1-150)||(14162393-14162542)
chr8 (299-399)||(17984647-17984747)
chr8 (69-149)||(23455277-23455357)
chr8 (73-150)||(14878574-14878651)
chr8 (73-150)||(17126555-17126632)
chr8 (73-150)||(22284665-22284742)
chr8 (90-149)||(24341760-24341819)
chr8 (67-150)||(27086365-27086447)
chr8 (88-150)||(18007802-18007864)
chr8 (73-150)||(21139358-21139435)
chr8 (364-441)||(23538939-23539016)
chr8 (96-149)||(24966940-24966993)
chr8 (67-150)||(17516086-17516168)
chr8 (88-150)||(18161676-18161738)
chr8 (73-131)||(42418827-42418885)
chr8 (73-142)||(1990804-1990873)
chr8 (73-150)||(6570813-6570890)
chr8 (69-142)||(17621093-17621165)
chr8 (58-147)||(19792534-19792623)
chr8 (69-150)||(20263103-20263183)
chr8 (69-150)||(21859132-21859213)
chr8 (73-150)||(22817928-22818005)
chr8 (69-150)||(23222310-23222391)
chr8 (69-142)||(25461394-25461467)
chr8 (67-142)||(6279430-6279505)
chr8 (67-130)||(29325063-29325125)
chr8 (96-150)||(14351995-14352049)
chr8 (330-399)||(21675502-21675574)
chr8 (69-147)||(38350226-38350304)
chr8 (69-142)||(13365914-13365987)
chr8 (69-142)||(17504418-17504491)
chr8 (69-150)||(21049732-21049812)
chr8 (69-150)||(21843321-21843402)
chr8 (69-150)||(23879547-23879627)
chr8 (69-150)||(25396658-25396739)
chr8 (69-130)||(39731003-39731064)
chr8 (69-142)||(45466420-45466493)
chr8 (90-150)||(22991017-22991076)
[»] chr3 (51 HSPs)
chr3 (298-451)||(40355388-40355542)
chr3 (1-150)||(11870080-11870230)
chr3 (28-150)||(8531615-8531739)
chr3 (1-150)||(42244793-42244942)
chr3 (69-150)||(40846491-40846572)
chr3 (86-150)||(8686221-8686285)
chr3 (67-149)||(3226556-3226637)
chr3 (67-149)||(4829775-4829856)
chr3 (69-150)||(16703476-16703557)
chr3 (89-150)||(41546120-41546181)
chr3 (58-134)||(17209356-17209431)
chr3 (67-150)||(12781866-12781948)
chr3 (67-150)||(13298110-13298192)
chr3 (58-150)||(13418078-13418171)
chr3 (67-142)||(24696585-24696659)
chr3 (88-150)||(3250428-3250490)
chr3 (88-150)||(14661136-14661198)
chr3 (73-142)||(2721641-2721710)
chr3 (96-149)||(19567377-19567430)
chr3 (96-149)||(22038591-22038644)
chr3 (72-149)||(27879934-27880011)
chr3 (96-147)||(13601402-13601453)
chr3 (88-150)||(3245404-3245466)
chr3 (67-149)||(14094635-14094716)
chr3 (67-149)||(15429599-15429680)
chr3 (69-150)||(11827727-11827808)
chr3 (69-142)||(13068487-13068560)
chr3 (69-150)||(13098042-13098123)
chr3 (89-150)||(14495169-14495230)
chr3 (96-149)||(25054690-25054743)
chr3 (96-149)||(25766071-25766124)
chr3 (66-150)||(20150228-20150311)
chr3 (67-142)||(3279529-3279603)
chr3 (67-150)||(19656392-19656474)
chr3 (2-36)||(8686084-8686118)
chr3 (88-150)||(17041426-17041488)
chr3 (69-147)||(53160859-53160937)
chr3 (73-150)||(2005652-2005728)
chr3 (69-142)||(4651138-4651211)
chr3 (69-150)||(7908215-7908296)
chr3 (96-149)||(11398547-11398600)
chr3 (69-142)||(12776331-12776404)
chr3 (69-150)||(13094240-13094321)
chr3 (69-150)||(13664807-13664887)
chr3 (77-150)||(14072040-14072113)
chr3 (69-142)||(14457612-14457685)
chr3 (69-150)||(17766408-17766489)
chr3 (69-146)||(27406906-27406983)
chr3 (69-150)||(50909189-50909270)
chr3 (106-150)||(13690938-13690982)
chr3 (89-149)||(34053936-34053996)
[»] chr7 (68 HSPs)
chr7 (299-448)||(20146690-20146838)
chr7 (298-429)||(16088418-16088549)
chr7 (14-150)||(17911284-17911421)
chr7 (25-150)||(4983388-4983515)
chr7 (349-448)||(18083406-18083506)
chr7 (58-134)||(4256916-4256992)
chr7 (69-150)||(1611720-1611801)
chr7 (90-147)||(4467339-4467396)
chr7 (69-146)||(30064299-30064376)
chr7 (58-150)||(5825748-5825839)
chr7 (91-150)||(4461071-4461130)
chr7 (90-149)||(11484189-11484248)
chr7 (306-451)||(16195122-16195268)
chr7 (67-149)||(23203497-23203578)
chr7 (67-149)||(23509624-23509705)
chr7 (67-149)||(23515406-23515487)
chr7 (67-149)||(41113139-41113220)
chr7 (69-150)||(4090400-4090481)
chr7 (58-150)||(21062919-21063010)
chr7 (67-150)||(545425-545507)
chr7 (87-150)||(4540903-4540966)
chr7 (88-150)||(649138-649200)
chr7 (88-150)||(14942080-14942142)
chr7 (88-150)||(15369673-15369735)
chr7 (88-150)||(15707592-15707654)
chr7 (88-150)||(16897638-16897700)
chr7 (67-149)||(18915640-18915721)
chr7 (90-147)||(680302-680359)
chr7 (96-149)||(1462229-1462282)
chr7 (69-150)||(12561617-12561698)
chr7 (69-150)||(12567351-12567432)
chr7 (69-150)||(16077117-16077198)
chr7 (69-150)||(41781473-41781554)
chr7 (313-397)||(8250038-8250122)
chr7 (96-148)||(21005837-21005889)
chr7 (67-150)||(538550-538632)
chr7 (88-147)||(33612620-33612679)
chr7 (88-150)||(4312894-4312956)
chr7 (96-150)||(9004289-9004343)
chr7 (88-150)||(9192478-9192540)
chr7 (103-149)||(9194375-9194421)
chr7 (96-150)||(10204345-10204399)
chr7 (96-150)||(16463585-16463639)
chr7 (88-146)||(19515731-19515789)
chr7 (88-150)||(48355941-48356003)
chr7 (69-150)||(783065-783146)
chr7 (69-150)||(4294308-4294389)
chr7 (88-149)||(8880357-8880418)
chr7 (73-150)||(9258953-9259030)
chr7 (73-150)||(9311223-9311300)
chr7 (69-150)||(16097704-16097785)
chr7 (69-150)||(19364138-19364219)
chr7 (69-142)||(34390348-34390421)
chr7 (90-147)||(46274052-46274109)
chr7 (67-150)||(12554637-12554719)
chr7 (87-150)||(13755316-13755379)
chr7 (88-150)||(25181321-25181383)
chr7 (103-149)||(48713133-48713179)
chr7 (362-395)||(4598614-4598647)
chr7 (69-142)||(5840392-5840465)
chr7 (105-150)||(15522683-15522728)
chr7 (353-429)||(20376582-20376659)
chr7 (353-429)||(20376925-20377002)
chr7 (69-142)||(20624301-20624374)
chr7 (69-142)||(20628178-20628251)
chr7 (69-142)||(23293989-23294062)
chr7 (73-150)||(39270856-39270933)
chr7 (89-149)||(6257835-6257895)
[»] chr6 (73 HSPs)
chr6 (298-448)||(23292621-23292772)
chr6 (299-446)||(12484438-12484584)
chr6 (58-150)||(4740675-4740766)
chr6 (329-436)||(16165932-16166041)
chr6 (1-150)||(17794176-17794327)
chr6 (68-150)||(23348487-23348569)
chr6 (58-150)||(4205931-4206022)
chr6 (6-135)||(28734389-28734519)
chr6 (6-150)||(25031458-25031603)
chr6 (56-146)||(26821574-26821664)
chr6 (69-150)||(15471450-15471531)
chr6 (69-150)||(22601658-22601739)
chr6 (58-147)||(24545916-24546004)
chr6 (58-150)||(3923365-3923457)
chr6 (90-150)||(12658299-12658359)
chr6 (90-150)||(12660791-12660851)
chr6 (1-150)||(29093253-29093403)
chr6 (69-147)||(20463990-20464068)
chr6 (58-150)||(18973326-18973418)
chr6 (69-148)||(15171884-15171963)
chr6 (67-149)||(1122835-1122916)
chr6 (350-399)||(12478701-12478750)
chr6 (1-147)||(25923632-25923779)
chr6 (69-149)||(15161876-15161956)
chr6 (324-396)||(19971417-19971489)
chr6 (299-398)||(24216851-24216949)
chr6 (67-150)||(25606636-25606718)
chr6 (88-147)||(25948982-25949041)
chr6 (71-150)||(30244954-30245033)
chr6 (67-149)||(23603601-23603682)
chr6 (69-150)||(12657616-12657697)
chr6 (69-150)||(18627122-18627202)
chr6 (69-150)||(19993289-19993370)
chr6 (90-147)||(20222182-20222239)
chr6 (90-147)||(22116166-22116223)
chr6 (88-149)||(29253648-29253709)
chr6 (90-150)||(24393245-24393305)
chr6 (67-150)||(17814278-17814360)
chr6 (88-147)||(19613102-19613161)
chr6 (67-150)||(24218459-24218541)
chr6 (67-150)||(25614974-25615056)
chr6 (58-149)||(26138376-26138467)
chr6 (69-147)||(8603206-8603284)
chr6 (100-150)||(13217638-13217688)
chr6 (89-150)||(23517657-23517719)
chr6 (89-150)||(23574982-23575044)
chr6 (88-150)||(25963579-25963641)
chr6 (88-150)||(25968226-25968288)
chr6 (69-147)||(29360020-29360098)
chr6 (69-142)||(2181699-2181772)
chr6 (96-149)||(5950011-5950064)
chr6 (69-150)||(18195816-18195897)
chr6 (69-150)||(18448471-18448552)
chr6 (69-150)||(25402750-25402831)
chr6 (88-149)||(25507306-25507367)
chr6 (67-131)||(210438-210501)
chr6 (89-149)||(18234146-18234206)
chr6 (90-150)||(31965921-31965980)
chr6 (67-150)||(16469879-16469961)
chr6 (73-147)||(6794661-6794735)
chr6 (69-147)||(14077547-14077625)
chr6 (96-150)||(32542914-32542968)
chr6 (69-142)||(12993609-12993682)
chr6 (69-150)||(18732053-18732134)
chr6 (69-150)||(18822592-18822673)
chr6 (69-142)||(19270182-19270254)
chr6 (69-150)||(23297712-23297793)
chr6 (69-150)||(35271151-35271231)
chr6 (89-149)||(17739335-17739395)
chr6 (90-150)||(18854348-18854408)
chr6 (348-451)||(23295401-23295503)
chr6 (58-149)||(26017621-26017713)
chr6 (58-149)||(26156994-26157086)
[»] scaffold0111 (1 HSPs)
scaffold0111 (318-448)||(35529-35658)
[»] chr4 (43 HSPs)
chr4 (15-150)||(5513895-5514032)
chr4 (58-150)||(22181329-22181421)
chr4 (69-150)||(9856898-9856979)
chr4 (319-442)||(19075883-19076007)
chr4 (58-147)||(11922721-11922810)
chr4 (90-150)||(9488704-9488764)
chr4 (90-150)||(16212678-16212738)
chr4 (58-150)||(21515717-21515808)
chr4 (67-149)||(10631089-10631170)
chr4 (67-149)||(10821719-10821800)
chr4 (67-149)||(20617884-20617965)
chr4 (69-150)||(40032-40113)
chr4 (73-150)||(7196912-7196989)
chr4 (69-150)||(16374936-16375017)
chr4 (88-149)||(24125572-24125633)
chr4 (58-149)||(5675124-5675215)
chr4 (67-150)||(16218115-16218197)
chr4 (67-150)||(16221435-16221517)
chr4 (67-150)||(18292276-18292359)
chr4 (88-150)||(11902977-11903039)
chr4 (88-149)||(13621996-13622057)
chr4 (69-150)||(18286712-18286793)
chr4 (67-146)||(21102529-21102607)
chr4 (88-150)||(15409707-15409769)
chr4 (89-147)||(38651853-38651911)
chr4 (88-150)||(45234048-45234110)
chr4 (69-142)||(16226738-16226811)
chr4 (69-142)||(17995837-17995910)
chr4 (69-150)||(18241929-18242009)
chr4 (69-142)||(25145940-25146013)
chr4 (67-131)||(6518116-6518179)
chr4 (67-142)||(20059467-20059541)
chr4 (69-147)||(16951619-16951697)
chr4 (1-35)||(33331245-33331279)
chr4 (97-150)||(11502081-11502134)
chr4 (69-142)||(12844631-12844704)
chr4 (69-150)||(17484708-17484788)
chr4 (350-399)||(18421018-18421067)
chr4 (69-150)||(26810853-26810933)
chr4 (69-150)||(33331366-33331447)
chr4 (69-142)||(48641373-48641446)
chr4 (90-150)||(3772558-3772618)
chr4 (348-448)||(12452951-12453048)
[»] scaffold0001 (4 HSPs)
scaffold0001 (58-150)||(520441-520533)
scaffold0001 (69-150)||(49637-49718)
scaffold0001 (69-142)||(425316-425389)
scaffold0001 (69-142)||(158768-158841)
[»] chr1 (31 HSPs)
chr1 (1-150)||(13799696-13799845)
chr1 (71-150)||(28764183-28764262)
chr1 (86-150)||(26191913-26191977)
chr1 (67-149)||(38045048-38045129)
chr1 (69-150)||(25726649-25726730)
chr1 (69-150)||(25735057-25735138)
chr1 (69-150)||(28206651-28206732)
chr1 (90-146)||(25405334-25405390)
chr1 (88-150)||(16431222-16431284)
chr1 (92-150)||(44537918-44537976)
chr1 (88-150)||(48255966-48256028)
chr1 (73-150)||(19364366-19364443)
chr1 (89-150)||(30819392-30819453)
chr1 (58-150)||(16148752-16148844)
chr1 (90-150)||(16382404-16382464)
chr1 (67-150)||(2385951-2386034)
chr1 (90-149)||(16385262-16385321)
chr1 (88-150)||(17716406-17716468)
chr1 (69-147)||(20861114-20861192)
chr1 (88-150)||(52236223-52236285)
chr1 (96-149)||(20411914-20411967)
chr1 (69-142)||(21792657-21792730)
chr1 (69-150)||(23495269-23495350)
chr1 (69-150)||(27911618-27911699)
chr1 (90-150)||(23298531-23298591)
chr1 (67-150)||(22135881-22135963)
chr1 (88-150)||(26134876-26134938)
chr1 (69-150)||(16485009-16485090)
chr1 (73-150)||(17986272-17986349)
chr1 (69-142)||(18885660-18885733)
chr1 (69-150)||(22660364-22660444)
[»] scaffold1559 (1 HSPs)
scaffold1559 (58-150)||(1096-1188)
[»] scaffold0074 (2 HSPs)
scaffold0074 (58-150)||(23093-23185)
scaffold0074 (69-118)||(54273-54320)
[»] chr5 (38 HSPs)
chr5 (58-147)||(22170481-22170570)
chr5 (6-150)||(12410220-12410365)
chr5 (69-138)||(20725157-20725226)
chr5 (69-150)||(24164954-24165035)
chr5 (298-428)||(20846724-20846856)
chr5 (90-150)||(24164693-24164753)
chr5 (58-150)||(31758426-31758517)
chr5 (67-149)||(28835205-28835286)
chr5 (67-149)||(41766042-41766123)
chr5 (67-150)||(20450116-20450198)
chr5 (67-141)||(20444635-20444708)
chr5 (88-150)||(20967424-20967486)
chr5 (67-149)||(24214453-24214534)
chr5 (73-150)||(21389368-21389445)
chr5 (73-150)||(34223435-34223512)
chr5 (88-148)||(15059111-15059171)
chr5 (90-150)||(23029969-23030028)
chr5 (67-150)||(21734882-21734965)
chr5 (91-150)||(23343897-23343956)
chr5 (90-148)||(16676793-16676851)
chr5 (73-150)||(22940792-22940869)
chr5 (69-150)||(23267401-23267482)
chr5 (69-150)||(23583235-23583316)
chr5 (69-150)||(23600432-23600513)
chr5 (96-149)||(25486059-25486112)
chr5 (69-149)||(24143520-24143600)
chr5 (67-150)||(3387724-3387806)
chr5 (67-150)||(24220084-24220166)
chr5 (67-150)||(25741386-25741468)
chr5 (67-150)||(42790132-42790214)
chr5 (88-150)||(2953857-2953919)
chr5 (103-149)||(20104312-20104358)
chr5 (73-138)||(17409034-17409099)
chr5 (73-142)||(20169769-20169838)
chr5 (69-150)||(20799441-20799522)
chr5 (73-138)||(21381988-21382053)
chr5 (69-150)||(29053312-29053392)
chr5 (330-399)||(26724875-26724946)
[»] scaffold0123 (2 HSPs)
scaffold0123 (1-146)||(13853-14000)
scaffold0123 (69-142)||(2236-2309)
[»] chr2 (38 HSPs)
chr2 (14-150)||(24321497-24321635)
chr2 (69-145)||(24177984-24178060)
chr2 (87-150)||(23257395-23257458)
chr2 (319-451)||(17739078-17739210)
chr2 (90-150)||(25337479-25337539)
chr2 (331-446)||(27498252-27498367)
chr2 (318-446)||(18928254-18928383)
chr2 (88-150)||(15583476-15583538)
chr2 (69-150)||(25144554-25144635)
chr2 (73-150)||(28496963-28497040)
chr2 (69-150)||(30949553-30949634)
chr2 (90-150)||(24371830-24371890)
chr2 (96-147)||(20851918-20851969)
chr2 (88-147)||(32441755-32441814)
chr2 (88-150)||(20281707-20281769)
chr2 (69-142)||(5500062-5500135)
chr2 (69-142)||(20635365-20635438)
chr2 (96-149)||(23140340-23140393)
chr2 (96-149)||(23552130-23552183)
chr2 (69-150)||(25043422-25043502)
chr2 (89-146)||(25858999-25859056)
chr2 (69-150)||(27744750-27744831)
chr2 (69-142)||(33181396-33181469)
chr2 (69-150)||(42767651-42767732)
chr2 (88-150)||(11390830-11390892)
chr2 (88-150)||(11407491-11407553)
chr2 (89-147)||(21344819-21344877)
chr2 (67-149)||(21468713-21468794)
chr2 (88-150)||(24506987-24507049)
chr2 (88-146)||(41653941-41653999)
chr2 (103-149)||(44997890-44997936)
chr2 (58-150)||(23699113-23699205)
chr2 (77-142)||(23703972-23704037)
chr2 (362-399)||(23781451-23781488)
chr2 (69-142)||(23798719-23798792)
chr2 (69-142)||(25370682-25370755)
chr2 (96-149)||(29568851-29568904)
chr2 (69-149)||(24825264-24825344)
[»] scaffold1225 (1 HSPs)
scaffold1225 (69-147)||(2027-2105)
[»] scaffold0161 (1 HSPs)
scaffold0161 (348-446)||(4803-4900)
[»] scaffold0113 (2 HSPs)
scaffold0113 (67-149)||(46876-46957)
scaffold0113 (94-150)||(550-606)
[»] scaffold0471 (1 HSPs)
scaffold0471 (88-149)||(10160-10221)
[»] scaffold0213 (2 HSPs)
scaffold0213 (88-149)||(26652-26713)
scaffold0213 (90-144)||(21360-21413)
[»] scaffold0264 (1 HSPs)
scaffold0264 (89-149)||(22729-22789)
[»] scaffold0031 (4 HSPs)
scaffold0031 (67-150)||(102142-102224)
scaffold0031 (73-147)||(77544-77618)
scaffold0031 (88-147)||(22943-23002)
scaffold0031 (96-147)||(100048-100099)
[»] scaffold0009 (3 HSPs)
scaffold0009 (67-150)||(238313-238395)
scaffold0009 (69-150)||(151166-151247)
scaffold0009 (69-149)||(154161-154240)
[»] scaffold0005 (1 HSPs)
scaffold0005 (67-150)||(300427-300509)
[»] scaffold0360 (1 HSPs)
scaffold0360 (88-150)||(75-137)
[»] scaffold0186 (1 HSPs)
scaffold0186 (350-432)||(10624-10704)
[»] scaffold0064 (1 HSPs)
scaffold0064 (88-150)||(48466-48528)
[»] scaffold0032 (2 HSPs)
scaffold0032 (319-399)||(80296-80377)
scaffold0032 (69-150)||(117491-117572)
[»] scaffold0098 (1 HSPs)
scaffold0098 (96-149)||(44608-44661)
[»] scaffold0347 (1 HSPs)
scaffold0347 (69-149)||(2376-2456)
[»] scaffold0916 (1 HSPs)
scaffold0916 (88-147)||(3169-3228)
[»] scaffold0894 (1 HSPs)
scaffold0894 (67-150)||(2704-2786)
[»] scaffold0757 (1 HSPs)
scaffold0757 (67-150)||(84-166)
[»] scaffold0138 (1 HSPs)
scaffold0138 (67-150)||(27098-27181)
[»] scaffold0713 (1 HSPs)
scaffold0713 (58-148)||(6963-7053)
[»] scaffold0447 (2 HSPs)
scaffold0447 (88-146)||(6120-6178)
scaffold0447 (88-146)||(10734-10792)
[»] scaffold0383 (1 HSPs)
scaffold0383 (88-146)||(8729-8787)
[»] scaffold0071 (1 HSPs)
scaffold0071 (67-149)||(32558-32639)
[»] scaffold0058 (1 HSPs)
scaffold0058 (88-150)||(61525-61587)
[»] scaffold0056 (1 HSPs)
scaffold0056 (69-147)||(36789-36867)
[»] scaffold0861 (1 HSPs)
scaffold0861 (69-142)||(1100-1173)
[»] scaffold0825 (1 HSPs)
scaffold0825 (69-150)||(2649-2730)
[»] scaffold0674 (1 HSPs)
scaffold0674 (69-142)||(2102-2175)
[»] scaffold0315 (1 HSPs)
scaffold0315 (69-150)||(14459-14540)
[»] scaffold0291 (1 HSPs)
scaffold0291 (69-150)||(1187-1268)
[»] scaffold0258 (1 HSPs)
scaffold0258 (69-142)||(21952-22025)
[»] scaffold0228 (2 HSPs)
scaffold0228 (69-150)||(17382-17463)
scaffold0228 (69-150)||(27334-27415)
[»] scaffold0218 (1 HSPs)
scaffold0218 (69-150)||(98-179)
[»] scaffold0192 (1 HSPs)
scaffold0192 (69-142)||(4247-4320)
[»] scaffold0162 (1 HSPs)
scaffold0162 (69-150)||(34900-34981)
[»] scaffold0116 (1 HSPs)
scaffold0116 (69-142)||(37541-37614)
[»] scaffold0092 (1 HSPs)
scaffold0092 (96-149)||(19891-19944)
[»] scaffold0051 (1 HSPs)
scaffold0051 (69-146)||(34235-34312)
[»] scaffold0014 (1 HSPs)
scaffold0014 (73-150)||(191470-191547)
[»] scaffold0351 (1 HSPs)
scaffold0351 (66-150)||(6376-6460)
[»] scaffold0115 (1 HSPs)
scaffold0115 (298-448)||(41559-41705)
[»] scaffold0500 (1 HSPs)
scaffold0500 (67-150)||(12544-12626)
[»] scaffold0142 (1 HSPs)
scaffold0142 (67-150)||(27144-27226)
[»] scaffold0006 (1 HSPs)
scaffold0006 (103-150)||(28800-28847)
[»] scaffold1092 (1 HSPs)
scaffold1092 (73-147)||(2001-2075)
[»] scaffold0371 (1 HSPs)
scaffold0371 (88-150)||(9442-9504)
[»] scaffold0037 (2 HSPs)
scaffold0037 (69-131)||(72369-72431)
scaffold0037 (69-131)||(84559-84621)
[»] scaffold0035 (1 HSPs)
scaffold0035 (361-395)||(64538-64572)
[»] scaffold1354 (1 HSPs)
scaffold1354 (69-142)||(681-754)
[»] scaffold1208 (1 HSPs)
scaffold1208 (69-150)||(2234-2315)
[»] scaffold0773 (1 HSPs)
scaffold0773 (73-150)||(809-886)
[»] scaffold0374 (1 HSPs)
scaffold0374 (69-150)||(4708-4789)
[»] scaffold0231 (1 HSPs)
scaffold0231 (73-150)||(21013-21089)
[»] scaffold0084 (1 HSPs)
scaffold0084 (69-134)||(31371-31435)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-150)||(22862-22943)
[»] scaffold0066 (1 HSPs)
scaffold0066 (69-150)||(61658-61739)
[»] scaffold0060 (1 HSPs)
scaffold0060 (69-150)||(73354-73435)
[»] scaffold0042 (1 HSPs)
scaffold0042 (69-142)||(22055-22128)
[»] scaffold0012 (1 HSPs)
scaffold0012 (69-150)||(101696-101777)
[»] scaffold0004 (1 HSPs)
scaffold0004 (69-150)||(356351-356432)
[»] scaffold0855 (1 HSPs)
scaffold0855 (106-150)||(3067-3111)
[»] scaffold0847 (1 HSPs)
scaffold0847 (106-150)||(3232-3276)
[»] scaffold0535 (1 HSPs)
scaffold0535 (69-141)||(669-741)
[»] scaffold0057 (1 HSPs)
scaffold0057 (103-147)||(20838-20882)


Alignment Details
Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 298 - 448
Target Start/End: Complemental strand, 17124465 - 17124314
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgaga-ttggagatttattttggtgatgtatta 396  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  17124465 ctgattaggatgtctgtcttttgttagttatgttttatgactttatgagatttatcactcagtttgttgagatttggagatttattttggtgatgtatga 17124366  T
Q  397 tgaaatatttggcatggctaccttgaagatttttattatatgttgatgagat 448  Q
    ||| |||| |||||||||||| ||| |||||||  |||| ||||||||||||    
T  17124365 tgatatatgtggcatggctactttggagattttatttatctgttgatgagat 17124314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 298 - 449
Target Start/End: Original strand, 14400361 - 14400514
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttat-tttttatgactttatgagatttatcactcagtttgttgagatt-ggagatttattttggtgatgtatt 395  Q
    ||||||| ||||| ||||||||||| ||||| ||||||| || ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  14400361 ctgattatgatgtatgtctgttgttttttatgtttttatcacattatgagatttatcactcaatttgttgagatttggagatttattttggtgatgtatt 14400460  T
Q  396 atgaaatatttggcatggctaccttgaagatttttattatatgttgatgagata 449  Q
    |||| |||| || ||||||||| ||  | |||||||||||||||||||||||||    
T  14400461 atgagatatgtgacatggctactttagatatttttattatatgttgatgagata 14400514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 298 - 448
Target Start/End: Complemental strand, 25261478 - 25261328
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtattat 397  Q
    ||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||| | ||| | || |||||||||||||||||||||||||||||||    
T  25261478 ctgattaggatgtatgtctgtcgttatttatgttttatgtctttatgagatttatcatttagtatattcagattggagatttattttggtgatgtattat 25261379  T
Q  398 gaaatatttggcatggctaccttgaagatttttattatatgttgatgagat 448  Q
    || |||  || ||||||||| ||| ||||||||||||| |||| |||||||    
T  25261378 gagatacatgtcatggctactttgtagatttttattatctgttaatgagat 25261328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 451
Target Start/End: Complemental strand, 16227812 - 16227659
Alignment:
Q  298 ctgattaggatgtctgtctgt-tgttatttat-tttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtatt 395  Q
    ||||||||||||| ||| ||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16227812 ctgattaggatgtatgtttgtctgttgtttatgtttttatgactttatgagatttatcactcagtatgttgagattggagatttattttggtgatgtatt 16227713  T
Q  396 atgaaatatttggcatggctaccttgaagatttttattatatgttgatgagatatt 451  Q
    |||| |||| ||||||| ||| |||  ||| ||||||||| ||||||||| |||||    
T  16227712 atgatatatgtggcatgtcta-cttagaga-ttttattatctgttgatgatatatt 16227659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 14162393 - 14162542
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactc 98  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||| ||||  |  |||| |||||| ||  |||||| ||||||||||||||||||| |||    
T  14162393 cacgaccgtgtggctggtggcacgggccgtgccaag-cttctgacttgggggagtcatatttttgtattgaatctttgtattttcaacccgaatcagctc 14162491  T
Q  99 caaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||||||||||||||| |||| ||||||||  ||||||||||||||    
T  14162492 caaatc-cctttcttttgctccaagactcaatctttagaatatttgttcctg 14162542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 299 - 399
Target Start/End: Original strand, 17984647 - 17984747
Alignment:
Q  299 tgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgaga-ttggagatttattttggtgatgtattat 397  Q
    |||||| ||||||||||| | ||||||||| ||||||||||| |||||||| |||| |||||||||||||| ||||||||||||||||||  ||||||||    
T  17984647 tgattaagatgtctgtct-tagttatttatgttttatgacttcatgagattcatcattcagtttgttgagatttggagatttattttggtcttgtattat 17984745  T
Q  398 ga 399  Q
    ||    
T  17984746 ga 17984747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 23455357 - 23455277
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||| |||| |||||| ||||| ||| ||||||    
T  23455357 aatcttcgtattttcaacccgaatcagctccaaatcctctttcttttgctccaagactcaatctatcaaacattcgttcct 23455277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 14878574 - 14878651
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||| |||| ||||  |||||||||||||| |||| |||||  |||||||||| ||||||    
T  14878574 ttcgtattttcaacccgaatcagctcctaatcctctttcttttgctccaagactcaatccatcaaatatttattcctg 14878651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 17126632 - 17126555
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||| |||| ||||  |||||||||||||| |||| |||||  ||||||||| |||||||    
T  17126632 ttcgtattttcaacccgaatcagctcctaatcctctttcttttgctccaagactcaatccatcaaatattcgttcctg 17126555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 22284742 - 22284665
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||| |||| ||||  |||||||||||||| |||| |||||  ||||||||| |||||||    
T  22284742 ttcgtattttcaacccgaatcagctcctaatcctctttcttttgctccaagactcaatccatcaaatattcgttcctg 22284665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 24341819 - 24341760
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||| ||||||||||| ||||||||||||  |||| |||||||||||||||||||||||    
T  24341819 aatcagctccaaatctcatttcttttgctctaagactcaatctttcaaatatttgttcct 24341760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 27086447 - 27086365
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||||||||| ||| ||||||||||||||| |||| |||||  |||||||| ||||||||    
T  27086447 caaatcttcgtattttcgtaccgaatcaactccagatc-cctttcttttgctccaagactcaatccatcaaatatctgttcctg 27086365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 18007864 - 18007802
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||| |||| ||||||||||||||| |||| |||||||| |||||||||||||||    
T  18007864 cgaatcagctccgaatcacctttcttttgctccaagactcaatctttgaaatatttgttcctg 18007802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 21139435 - 21139358
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| |||  ||||  |||||||||||||| |||| |||||| ||||||||| |||||||    
T  21139435 ttcgtattttcatcccgaatcagctcataatcctctttcttttgctccaagactcaatctatcaaatattcgttcctg 21139358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 441
Target Start/End: Complemental strand, 23539016 - 23538939
Alignment:
Q  364 ttgagattggagatttattttggtgatgtattatgaaatatttggcatggctaccttgaagatttttattatatgttg 441  Q
    |||||||| ||| ||||||||||||||||||||||| |||| || ||||||||| ||| |||||| | |||| |||||    
T  23539016 ttgagatttgagttttattttggtgatgtattatgatatatgtgacatggctactttggagatttattttatctgttg 23538939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 24966993 - 24966940
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  24966993 ctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcct 24966940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 17516086 - 17516168
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  17516086 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 17516168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 18161738 - 18161676
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||| || |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  18161738 cgaatcagctcaaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 18161676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 42418827 - 42418885
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatc 131  Q
    |||||||||||||||||||||| |||| ||||  |||||||||||||| |||| |||||    
T  42418827 ttcgtattttcaacccgaatcagctcctaatcctctttcttttgctccaagactcaatc 42418885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 1990804 - 1990873
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||| ||||||||| || | ||||  |||||||||||||| |||| |||||| |||||||||    
T  1990804 ttcgtattttcatcccgaatcagcttctaatcctctttcttttgctccaagactcaatctatcaaatatt 1990873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 6570813 - 6570890
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||| |||| ||||  |||||||||| | | |||| |||||  ||||||||| |||||||    
T  6570813 ttcgtattttcaacccgaatcagctcctaatcctctttcttttgtttcaagactcaatccatcaaatattcgttcctg 6570890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 17621165 - 17621093
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||| ||||||||  |||||||| ||||||||| ||||||||||||||| |||| |||||  |||||||||    
T  17621165 aatcttcctattttcataccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatatt 17621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 19792534 - 19792623
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||| ||||||||| |||||| |  |||||||| |||| ||||| |||||||||||||  |||| ||||||||  |||||| ||||    
T  19792534 tttttgcaccaaatcttcatatttttagtccgaatcagctccgaatcttctttcttttgctctaagactcaatctttagaatattcgttc 19792623  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 20263183 - 20263103
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||| ||||||||| |||||||    
T  20263183 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctccaagactcaatctatcaaatattcgttcctg 20263103  T

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Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 21859132 - 21859213
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  21859132 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 21859213  T

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Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 22818005 - 22817928
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| |||| ||||  |||||||||||||| |||  |||||| ||||| ||| |||||||    
T  22818005 ttcgtattttcatcccgaatcagctcctaatcctctttcttttgctccaagattcaatctatcaaacattcgttcctg 22817928  T

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Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 23222310 - 23222391
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||| | |||||| |||| | ||  |||| ||||||||| |||| ||||||||||| |||| |||||||    
T  23222310 aatcttcgtattttcaatctgaatcagctcctagtcctctttattttgctccaagactcaatctttcaattattcgttcctg 23222391  T

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Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 25461467 - 25461394
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  25461467 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 25461394  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 6279505 - 6279430
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||||   |||||||| ||||||| | | ||||||||||||| |||| |||||  |||||||||    
T  6279505 caaatcttcgtattttcgttccgaatcagctccaaaccccttttcttttgctccaagactcaatccatcaaatatt 6279430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 29325125 - 29325063
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaat 130  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| ||||    
T  29325125 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaat 29325063  T

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Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 14351995 - 14352049
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||||| |||||||||||| |||| ||||||||  ||||||||||||||    
T  14351995 ctccaattctcccttcttttgctccaagactcaatctttagaatatttgttcctg 14352049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 21675574 - 21675502
Alignment:
Q  330 ttttatgactttatgagattt---atcactcagtttgttgagattggagatttattttggtgatgtattatga 399  Q
    |||||||||||  ||||||||   |||||| ||| |||||||||||||| ||||| ||||| |||||||||||    
T  21675574 ttttatgacttgttgagatttttaatcactgagtatgttgagattggagttttatcttggtcatgtattatga 21675502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 38350226 - 38350304
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||||   |||||||| |||| || | ||||||||||||||| |||| |||||  ||||||||| ||||    
T  38350226 aatcttcgtattttcgcaccgaatcagctcccaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 38350304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 13365914 - 13365987
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||| |||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  13365914 aatcttcatattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 13365987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 17504418 - 17504491
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||| | |||| |||||  |||||||||    
T  17504418 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgcttcaagactcaatccatcaaatatt 17504491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 21049812 - 21049732
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  21049812 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 21049732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 21843321 - 21843402
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||| |||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  21843321 aatcttcgtatattcgttccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 21843402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 23879627 - 23879547
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  23879627 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 23879547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 25396739 - 25396658
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||  ||| |||||| |||| ||||  ||| |||||||||| |||| |||||| ||||| ||| |||||||    
T  25396739 aatcttcgtatttttcacctgaatcagctcctaatcctcttccttttgctccaagactcaatctatcaaacattcgttcctg 25396658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 39731003 - 39731064
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaat 130  Q
    ||||||||||||||    |||||||||||||||| | ||||||||||||||| |||| ||||    
T  39731003 aatcttcgtatttttgcaccgaatcaactccaaaacccctttcttttgctccaagactcaat 39731064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 45466493 - 45466420
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  45466493 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 45466420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 22991076 - 22991017
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||||| ||||||||||||||| |||| |||||| || |||||| |||||||    
T  22991076 aatcagctccaaatc-cctttcttttgctccaagactcaatctatccaatattcgttcctg 22991017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 1e-48; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 298 - 451
Target Start/End: Original strand, 40355388 - 40355542
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttattttttatgactttatgagatttat-cactcagtttgttgagattggagatttattttggtgatgtatta 396  Q
    ||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  40355388 ctgattatgatgtttgtctgttgttatttacattttatgactttatgagatttattcactcaatatgttgagattggagatttattttggtgatgtatta 40355487  T
Q  397 tgaaatatttggcatggctaccttgaagatttttattatatgttgatgagatatt 451  Q
    ||| |||| ||||||| |||| ||||||||||||||||| | |||||||||||||    
T  40355488 tgagatatgtggcatgactactttgaagatttttattattttttgatgagatatt 40355542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11870080 - 11870230
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctgattggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactcc 99  Q
    ||||||||||   |||||||||  | |||||||||| |||||| | | | | ||||| |||||||| ||||||||||||||||   ||||||||| ||||    
T  11870080 cacgaccgtgccactggaggcacagtccgtgccaagccttctggtggttagcttcatatttttgcaccaaatcttcgtatttttggcccgaatcagctcc 11870179  T
Q  100 aaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    | ||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  11870180 agatctcctttcttttgctccaagactcaatctttgaaatatttgttcctg 11870230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 8531739 - 8531615
Alignment:
Q  28 cgtgccaagtcttctgattggttgt-ttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagac 125  Q
    ||||||||| ||||||||||||||  ||||| |||||| | ||||||||||||||||   ||| ||||  ||||||||||||||||||||||||| | ||    
T  8531739 cgtgccaagccttctgattggttggcttcatatttttgtaccaaatcttcgtatttttggcccaaatcgcctccaaatctcctttcttttgctccaaaac 8531640  T
Q  126 gcaatctttcaaatatttgttcctg 150  Q
     ||||||||||||||||||||||||    
T  8531639 tcaatctttcaaatatttgttcctg 8531615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42244793 - 42244942
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactc 98  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||| ||||  |  |||| |||||| ||  |||||||||||||||||||||||||| ||     
T  42244793 cacgaccgtgtggctggtggcacaggccgtgccaag-cttctgacttgggggagtcatatttttgtattgaatcttcgtattttcaacccgaatcagctt 42244891  T
Q  99 caaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||||||||||||||| |||| ||||||||  ||||||||||||||    
T  42244892 caaatc-cctttcttttgctccaagactcaatctttagaatatttgttcctg 42244942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 40846572 - 40846491
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||| ||||||||| |||| ||||  |||||||||||||| |||| |||||| |||||||||||||||||    
T  40846572 aatcttcgtattttcatcccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaatatttgttcctg 40846491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 8686221 - 8686285
Alignment:
Q  86 cccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||| ||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||    
T  8686221 cccgaatcagctccaaatcacctttcttttgctccaggacacaatctttcaaatatttgttcctg 8686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 3226637 - 3226556
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  3226637 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatcaatcaaatattcgttcct 3226556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 4829856 - 4829775
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  4829856 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 4829775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 16703557 - 16703476
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||| || | ||||||||| |||||||||||||||||||| |||| |||| |||||||  |||||||||||||||    
T  16703557 aatcttcatatgtttaccccgaatcagctccaaatctcctttcttttactccaagactcaatcttagaaatatttgttcctg 16703476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 41546120 - 41546181
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  41546120 gaatcagctcaaaatctcctttcttttgctccaagactaaatctttcaaatatttgttcctg 41546181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 17209431 - 17209356
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatcttt 134  Q
    |||||||| | ||||||||||||||||  |||||||| ||||||||| ||||||||||||||| |||| ||||||||    
T  17209431 tttttgcaccgaatcttcgtattttcattccgaatcagctccaaatc-cctttcttttgctccaagactcaatcttt 17209356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 12781866 - 12781948
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||  |||||||    
T  12781866 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatatccgttcctg 12781948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 13298192 - 13298110
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| ||||  ||||  |||||||||||||||||    
T  13298192 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagacttaatccatcaaatatttgttcctg 13298110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 13418171 - 13418078
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctc--ctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||  |||||||||||||||| ||||||||| |||||||||| |||||||||||||   || || ||||||||  ||||||||||||||    
T  13418171 tttttgcattgaatcttcgtattttcagcccgaatcagctccaaatct-ctttcttttgctctaatatactcaatctttagaatatttgttcctg 13418078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 24696659 - 24696585
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  |||||||||    
T  24696659 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatatt 24696585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 3250428 - 3250490
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  3250428 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 3250490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 14661136 - 14661198
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  14661136 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 14661198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 2721710 - 2721641
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||||||||| |||  ||||  |||||||||||||| |||| |||||| |||||||||    
T  2721710 ttcgtattttcaacccgaatcagctcataatcctctttcttttgctccaagactcaatctatcaaatatt 2721641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 19567377 - 19567430
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  19567377 ctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcct 19567430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 22038644 - 22038591
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  22038644 ctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcct 22038591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 27880011 - 27879934
Alignment:
Q  72 cttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||  |||||||||| |||| ||||  |||||||||||||| |||| |||||| ||||||||| ||||||    
T  27880011 cttcgtatttttcacccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaatattcgttcct 27879934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 13601453 - 13601402
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||||||||    
T  13601453 ctccaattctcctttcttttgctccaagactccatctttcaaatatttgttc 13601402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 3245404 - 3245466
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| ||||||||||||| |||| |||| ||||||||  ||||||||||||||    
T  3245404 cgaatcagctccaattctcctttcttttactccaagactcaatctttagaatatttgttcctg 3245466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 14094716 - 14094635
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  14094716 caaatcttcgtattttcgtaccgaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 14094635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 15429680 - 15429599
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  15429680 caaatctccgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 15429599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 11827727 - 11827808
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||| ||| | | || ||||||||||||||  |||||||||||||| ||||  |||||||  ||||||||||||||    
T  11827727 aatcttcgtactttaagcacggatcaactccaaatcctctttcttttgctccaagaccgaatctttagaatatttgttcctg 11827808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 13068560 - 13068487
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  13068560 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 13068487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 13098123 - 13098042
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  13098123 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 13098042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 14495169 - 14495230
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| |||||| |||| ||||||||||||| |||| ||||||||  ||||||||||||||    
T  14495169 gaatcagctccaattctcgtttcttttgctccaagactcaatctttagaatatttgttcctg 14495230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 25054743 - 25054690
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||| |||| ||||||||  |||||||||||||    
T  25054743 ctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcct 25054690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 25766071 - 25766124
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||| | |||| | |||||||||||||||||||||    
T  25766071 ctccaattctcctttcttttgcttcaagactccatctttcaaatatttgttcct 25766124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 20150311 - 20150228
Alignment:
Q  66 tcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||   |||||||| ||||||| | ||||||||||| ||| |||| |||||  ||||||||| |||||||    
T  20150311 tcaaatcttcgtattttcgcaccgaatcagctccaaacc-cctttcttttgttccaagactcaatccatcaaatattcgttcctg 20150228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 3279603 - 3279529
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||| |||| ||||    
T  3279603 caaatcttcgtattttcgttccgaatcagctccaaacc-cctttcttttgctccaagactcaatctatcaattatt 3279529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 19656392 - 19656474
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||| ||||||||| |||| |||||  || |||||| |||||||    
T  19656392 caaatcttcgtattttcgtaccgaatcagctccaaatc-ccttttttttgctccaagactcaatccatccaatattcgttcctg 19656474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 36
Target Start/End: Original strand, 8686084 - 8686118
Alignment:
Q  2 acgaccgtgtggctggaggcaagggccgtgccaag 36  Q
    ||||||||||||||||||||| |||||||||||||    
T  8686084 acgaccgtgtggctggaggcacgggccgtgccaag 8686118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 17041488 - 17041426
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||||||  |||||||||||||| |||| ||||||||  |||||||| |||||    
T  17041488 cgaatcagctccaaatcctctttcttttgctccaagactcaatctttagaatatttgatcctg 17041426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 53160859 - 53160937
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||||   |||||||| ||||||| | ||||| ||||||||| |||| |||||  ||||||||| ||||    
T  53160859 aatcttcgtattttcgtaccgaatcagctccaaaacccctttattttgctccaagactcaatccatcaaatattcgttc 53160937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 2005728 - 2005652
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||| |||||| |||| ||||  ||| ||||| |||| |||| |||||  |||||||||||||||||    
T  2005728 ttcgtattttcaacctgaatcagctcctaatcctcttcctttt-ctccaagactcaatccatcaaatatttgttcctg 2005652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 4651211 - 4651138
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||| |||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  4651211 aatcttcatattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 4651138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 7908296 - 7908215
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||| | |  |||||| |||||||||  ||||||||| |||  |||| ||||||||  ||||||||||||||    
T  7908296 aatcttcgtattttaagcatgaatcagctccaaatcctctttcttttactcgaagactcaatctttagaatatttgttcctg 7908215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 11398600 - 11398547
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||| |||| |||||| |  |||||||||||||    
T  11398600 ctccaattctcctttcttttgctccaagactcaatctatagaatatttgttcct 11398547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 12776331 - 12776404
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||| |||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  12776331 aatcttcatattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 12776404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 13094240 - 13094321
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  13094240 aatcttcatattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 13094321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 13664887 - 13664807
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||||||||||    
T  13664887 aatcttcatattttcgttccaaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatatttgttcctg 13664807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 14072040 - 14072113
Alignment:
Q  77 tattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||| |||| ||||   ||| ||||||||| |||| |||||| ||||| ||| |||||||    
T  14072040 tattttcaacccgaatcagctcctaatcctattttttttgctccaagactcaatctatcaaacattcgttcctg 14072113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 14457612 - 14457685
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  14457612 aatcttcgtattttcgcaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 14457685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 17766489 - 17766408
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  17766489 aatcttcgtatttttgcaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 17766408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 27406983 - 27406906
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    |||||||||||||| |   ||||||| |||||||||   ||||||||||||| ||||  ||||||| |||||||||||    
T  27406983 aatcttcgtattttaagtacgaatcagctccaaatcctttttcttttgctccaagactgaatctttaaaatatttgtt 27406906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 50909189 - 50909270
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||||   |||| ||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  50909189 aatcttcatattttcgtaccgattcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 50909270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 13690982 - 13690938
Alignment:
Q  106 cctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||| |||| |||||  |||||||||||||||||    
T  13690982 cctttcttttgctccaagactcaatccatcaaatatttgttcctg 13690938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 34053936 - 34053996
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||| |||| |||| ||| |||| |||| | |||||||||||||||||||||    
T  34053936 gaatcagctccaattctcatttccttttctccaagactccatctttcaaatatttgttcct 34053996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 299 - 448
Target Start/End: Complemental strand, 20146838 - 20146690
Alignment:
Q  299 tgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtattatg 398  Q
    |||||||||||||||| | ||||||||||| ||||||||||| |||| |||||||||||||| ||||||||||| ||||||||||| || ||||||||||    
T  20146838 tgattaggatgtctgtgttttgttatttatgttttatgacttcatgaaatttatcactcagtatgttgagattgaagatttatttttgtaatgtattatg 20146739  T
Q  399 aaatatttggcatggctaccttgaagatttttattatatgttgatgagat 448  Q
    | |||| |||||||||||  ||| ||| ||||||||| ||||||||||||    
T  20146738 atatatgtggcatggctaatttggaga-ttttattatctgttgatgagat 20146690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 429
Target Start/End: Complemental strand, 16088549 - 16088418
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtattat 397  Q
    ||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||     
T  16088549 ctgattagggtgtctgtctgttgatatttatgttttatgaccttatgagatttaccactcagtatgttgagattggagatttaatttggtgatgtattac 16088450  T
Q  398 gaaatatttggcatggctaccttgaagatttt 429  Q
    || |||| |||||||| ||| ||| |||||||    
T  16088449 gagatatgtggcatggatactttggagatttt 16088418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 17911421 - 17911284
Alignment:
Q  14 ctggaggcaagggccgtgccaagtcttctgattggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttct 112  Q
    ||||||||| ||||||||||||| |||||| | |   | ||||| |||||||| ||||||||||||||||   ||||||||| ||||||||||| |||||    
T  17911421 ctggaggcacgggccgtgccaagccttctggtggtaggcttcatatttttgcaccaaatcttcgtatttttggcccgaatcagctccaaatctcgtttct 17911322  T
Q  113 tttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  17911321 tttgctccaagactcaatctttcaaatatttgttcctg 17911284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 4983388 - 4983515
Alignment:
Q  25 ggccgtgccaagtcttctgattggttgt-ttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctccta 122  Q
    ||||||||||||  |||||||||||||  ||||| |||||||| ||||||||||||||||   ||||||||| |||||||||||||||||||| |||  |    
T  4983388 ggccgtgccaagcgttctgattggttggcttcatatttttgcaccaaatcttcgtatttttttcccgaatcagctccaaatctcctttctttttctcaaa 4983487  T
Q  123 gacgcaatctttcaaatatttgttcctg 150  Q
    ||| ||||||||||||||||||||||||    
T  4983488 gactcaatctttcaaatatttgttcctg 4983515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 349 - 448
Target Start/End: Original strand, 18083406 - 18083506
Alignment:
Q  349 ttatcactcagtttgttgagattggagatttat-tttggtgatgtattatgaaatatttggcatggctaccttgaagatttttattatatgttgatgaga 447  Q
    |||||||||||| |||||||||| ||||||||| |||||||||||||||||| |||||| ||||| |||| |||| |||||||||||| ||||||| |||    
T  18083406 ttatcactcagtatgttgagatttgagatttatatttggtgatgtattatgatatattttgcatgactactttgaggatttttattatctgttgataaga 18083505  T
Q  448 t 448  Q
    |    
T  18083506 t 18083506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 4256916 - 4256992
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatcttt 134  Q
    |||||||||  |||||||||||||||| | ||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  4256916 tttttgcattcaatcttcgtattttcagcacgaatcagctccaaatctcctttcttttgctccaagactcaatcttt 4256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 1611801 - 1611720
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||||||| ||| |||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  1611801 aatcttcgtattttcaacccgaatcagctctaaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 1611720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 4467339 - 4467396
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  4467339 aatcagctccaaatctcctttcttttgctcaaagacgcaatctttcaaatatttgttc 4467396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 30064299 - 30064376
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||| ||||||   ||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||||||    
T  30064299 aatcttcatatttttggcccgaatcaactcaaaatctcctttcttttgctccaagactcaatctttaaaatatttgtt 30064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 5825839 - 5825748
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||| | ||||||||||||||| |||| |||| |||  ||||||||||||||    
T  5825839 tttttgcaccgaatcttcgtattttcatcccgaatcagctccaaa-cccctttcttttgctccaagactcaatttttagaatatttgttcctg 5825748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 4461071 - 4461130
Alignment:
Q  91 atcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  4461071 atcagctccaattctcctttcttttgctccaagacgcaatctttgaaatatttgttcctg 4461130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 11484189 - 11484248
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||    
T  11484189 aatcagctccaaatctcctttcttttgctctgagactcaatctttcaaatatttgttcct 11484248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 451
Target Start/End: Complemental strand, 16195268 - 16195122
Alignment:
Q  306 gatgtctgtctgttgttatttattttttatgactttatgagattta-tcactcagtttgttgagattggagatttatttt-ggtgatgtattatgaaata 403  Q
    ||||| |||||||  || ||||| |||||||||||||||||||||| ||||||||| || |||||||| |||||| |||| ||||||||||||||  |||    
T  16195268 gatgtttgtctgtcattgtttatattttatgactttatgagatttattcactcagtatgctgagattgaagattttttttgggtgatgtattatggtata 16195169  T
Q  404 tttggcatggctaccttgaagatttttattatatgttgatgagatatt 451  Q
    | || |||| | | |||| |||||||  |||  |||||||||||||||    
T  16195168 tgtgacatgac-aacttggagattttatttaattgttgatgagatatt 16195122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 23203578 - 23203497
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  23203578 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatcaatcaaatattcgttcct 23203497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 23509705 - 23509624
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  23509705 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatcaatcaaatattcgttcct 23509624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 23515487 - 23515406
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  23515487 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatcaatcaaatattcgttcct 23515406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 41113139 - 41113220
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  41113139 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 41113220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 4090481 - 4090400
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||| |||||| ||||||||   |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  4090481 aatcttcgtattttcaacctgaatcagctccaaattctctttcttttgctccaagactcaatctatcaaacattcgttcctg 4090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 21062919 - 21063010
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| | |||||||||||||||| ||||||| | ||||||||| ||||||||||||||| ||   ||||||||  ||||||||||||||    
T  21062919 tttttgcaccgaatcttcgtattttcatcccgaataagctccaaatc-cctttcttttgctccaagtatcaatctttagaatatttgttcctg 21063010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 545425 - 545507
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  545425 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 545507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 4540966 - 4540903
Alignment:
Q  87 ccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| ||||||||||| ||||||||||||| ||||  |||||||||||||||| ||||||    
T  4540966 ccgaatcagctccaaatctcttttcttttgctccaagactaaatctttcaaatatttattcctg 4540903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 649138 - 649200
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  649138 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 649200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 14942080 - 14942142
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  14942080 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 14942142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 15369673 - 15369735
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  15369673 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 15369735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 15707592 - 15707654
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  15707592 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 15707654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 16897638 - 16897700
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||| |||||||||||||||||| ||||  |||||||  ||||||||||||||    
T  16897638 cgaatcaactccaattctcctttcttttgctccaagactaaatcttttgaatatttgttcctg 16897700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 18915721 - 18915640
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| | ||||||||||||| |||| |||||  ||||||||| ||||||    
T  18915721 caaatcttcgtattttcgtaccgaatcaactccaaatc-catttcttttgctccaagactcaatccatcaaatattcgttcct 18915640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 680302 - 680359
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||| ||||||||| ||||||||||||||| |||| |||||||||| ||||||||||    
T  680302 aatcagctccaaatcccctttcttttgctccaagactcaatctttcatatatttgttc 680359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 1462282 - 1462229
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  1462282 ctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcct 1462229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 12561698 - 12561617
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  12561698 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 12561617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 12567432 - 12567351
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  12567432 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 12567351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 16077117 - 16077198
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  16077117 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 16077198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 41781554 - 41781473
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  41781554 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 41781473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 397
Target Start/End: Complemental strand, 8250122 - 8250038
Alignment:
Q  313 gtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtattat 397  Q
    |||| |||| ||||| |||| ||| ||||||||||||| | ||||| | ||||||||||| ||||||  ||||||||||||||||    
T  8250122 gtcttttgtcatttacttttaatgtctttatgagatttgttactcattatgttgagattgaagattttatttggtgatgtattat 8250038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 21005837 - 21005889
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcc 148  Q
    |||||| |||||||||||||||||| |||| | ||||||||||||||||||||    
T  21005837 ctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcc 21005889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 538550 - 538632
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||    ||||||||||||||||| |||||||||||||||| |||| |||||  || |||||| |||||||    
T  538550 caaatcttcgtatttttgtaccgaatcaactccaaat-tcctttcttttgctccaagactcaatccatccaatattcgttcctg 538632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 33612620 - 33612679
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||| |||| ||||||||||||| |||| ||||||||  |||||||||||    
T  33612620 cgaatcaactccaattctcatttcttttgctccaagactcaatctttagaatatttgttc 33612679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 4312956 - 4312894
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| | |||||||||||||||| |||| ||||||||  ||||||||||||||    
T  4312956 cgaatcagctccaattttcctttcttttgctccaagactcaatctttagaatatttgttcctg 4312894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 9004343 - 9004289
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||| ||||||||||| || |||| ||||||||||||||||||||||||    
T  9004343 ctccaattcttctttcttttgccccaagactcaatctttcaaatatttgttcctg 9004289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 9192540 - 9192478
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| ||| |||||||||||||| |||| ||||||||  ||||||||||||||    
T  9192540 cgaatcagctccaattcttctttcttttgctccaagactcaatctttagaatatttgttcctg 9192478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 9194375 - 9194421
Alignment:
Q  103 tctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||    
T  9194375 tctcctttcttttgctccaagactccatctttcaaatatttgttcct 9194421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 10204399 - 10204345
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  10204399 ctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 10204345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 16463585 - 16463639
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  16463585 ctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 16463639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 19515731 - 19515789
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||| |||||| | |||||||||||||||| |||| | ||||||||||||||||||    
T  19515731 cgaatcagctccaattatcctttcttttgctccaagactccatctttcaaatatttgtt 19515789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 48355941 - 48356003
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| | |||||||||||||||| |||| ||||||||  ||||||||||||||    
T  48355941 cgaatcagctccaattatcctttcttttgctccaagactcaatctttagaatatttgttcctg 48356003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 783065 - 783146
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  783065 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 783146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 4294389 - 4294308
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | | ||||||||||||| |||| |||||  ||||||||| |||||||    
T  4294389 aatcttcgtattttcgtaccgaatcagctccaaaacccatttcttttgctccaagactcaatccatcaaatattcgttcctg 4294308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 8880357 - 8880418
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||| |||| ||||||||||||| |||| ||||||||  |||||||||||||    
T  8880357 cgaatcagctccaattctcttttcttttgctccaagactcaatctttagaatatttgttcct 8880418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 9258953 - 9259030
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| || |||||| |||| ||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  9258953 ttcgtattttcatcctgaatcagctcctaatcctctttcttttgctccaagactcaatctgtcaaacattcgttcctg 9259030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 9311300 - 9311223
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| || |||||| |||| ||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  9311300 ttcgtattttcatcctgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 9311223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 16097704 - 16097785
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| | || |||||  ||||||||| |||||||    
T  16097704 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaaaactcaatccatcaaatattcgttcctg 16097785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 19364219 - 19364138
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  19364219 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 19364138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 34390421 - 34390348
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  34390421 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 34390348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 46274109 - 46274052
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||| |||||||||||||||||| ||||  |||||||  |||||||||||    
T  46274109 aatcaactccaattctcctttcttttgctccaagactaaatcttttgaatatttgttc 46274052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 12554637 - 12554719
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||||||||||   |||||||| |||||| || ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  12554637 caaatcatcgtattttcgtaccgaatcagctccaagtc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 12554719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 13755316 - 13755379
Alignment:
Q  87 ccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  13755316 ccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 13755379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 25181321 - 25181383
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||| ||||||||||||| | || ||||||||  ||||||||||||||    
T  25181321 cgaatcagctccaattctcatttcttttgctccaaaactcaatctttagaatatttgttcctg 25181383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 48713179 - 48713133
Alignment:
Q  103 tctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||| ||||||||||||| |||| | |||||||||||||||||||||    
T  48713179 tctcttttcttttgctccaagactccatctttcaaatatttgttcct 48713133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 395
Target Start/End: Original strand, 4598614 - 4598647
Alignment:
Q  362 tgttgagattggagatttattttggtgatgtatt 395  Q
    |||||||||||||||||||||| |||||||||||    
T  4598614 tgttgagattggagatttatttgggtgatgtatt 4598647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 5840465 - 5840392
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||| ||||||||  || ||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  5840465 aatcttcatattttcataccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 5840392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 15522728 - 15522683
Alignment:
Q  105 tcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| ||||||| |||| |||||||||| |||||||||||||    
T  15522728 tcctttctcttgctccaagactcaatctttcatatatttgttcctg 15522683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 429
Target Start/End: Original strand, 20376582 - 20376659
Alignment:
Q  353 cactcagtttgttgagattggagatttat-tttggtgatgtattatgaaatatttggcatggctaccttgaagatttt 429  Q
    |||||||| |||||||| | ||||||||| |||||||||||||||||| | || ||| |||||||  ||| |||||||    
T  20376582 cactcagtatgttgagacttgagatttatatttggtgatgtattatgatacatgtggaatggctattttggagatttt 20376659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 429
Target Start/End: Original strand, 20376925 - 20377002
Alignment:
Q  353 cactcagtttgttgagattggagatttat-tttggtgatgtattatgaaatatttggcatggctaccttgaagatttt 429  Q
    |||||||| |||||||| | ||||||||| |||||||||||||||||| | || ||| |||||||  ||| |||||||    
T  20376925 cactcagtatgttgagacttgagatttatatttggtgatgtattatgatacatgtggaatggctattttggagatttt 20377002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 20624374 - 20624301
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||| |||||||||   |||||||| ||||||| | ||||||||||||||| | || |||||| |||||||||    
T  20624374 aatctgcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaatactcaatctatcaaatatt 20624301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 20628251 - 20628178
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||| |||||||||   |||||||| ||||||| | ||||||||||||||| | || |||||| |||||||||    
T  20628251 aatctgcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaatactcaatctatcaaatatt 20628178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 23293989 - 23294062
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  23293989 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagacccaatccatcaaatatt 23294062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 39270933 - 39270856
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||  ||||||||| || | ||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  39270933 ttcgtattttcgtcccgaatcagcttctaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 39270856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 6257835 - 6257895
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||| |||||||||| ||||| | |||  | |||||||||||||||||||||    
T  6257835 gaatcagctccaagtctcctttctattgctgcaagattccatctttcaaatatttgttcct 6257895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 298 - 448
Target Start/End: Complemental strand, 23292772 - 23292621
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtattat 397  Q
    ||||||||||||| ||||||| ||||||||| ||||||| |||||||||||| |||||||||| || ||||||||  |||||||||| ||||||||||||    
T  23292772 ctgattaggatgtatgtctgtcgttatttatgttttatgtctttatgagattaatcactcagtatgatgagattgaggatttattttagtgatgtattat 23292673  T
Q  398 gaaatatttggcatggctaccttgaag-atttttattatatgttgatgagat 448  Q
    || |||| || ||||||||||||| || ||| ||||||| ||||||||||||    
T  23292672 gagatatgtgtcatggctaccttggagaattcttattatctgttgatgagat 23292621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 299 - 446
Target Start/End: Complemental strand, 12484584 - 12484438
Alignment:
Q  299 tgattaggatgtctgtctgttgttatttattttttatgactttatgagatttat-cactcagtttgttgagattggagatttattttggtgatgtattat 397  Q
    |||||| ||||| ||||||| |||||||||   ||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||    
T  12484584 tgattatgatgtatgtctgtcgttatttataccttatgactttacgagatttattcactcaatatgttgagattggagatttattttggtgatgtattat 12484485  T
Q  398 gaaatatttggcatggctaccttgaagatttttattatatgttgatgag 446  Q
    |   ||| |||||||||||| ||| ||| ||||||||||||||||||||    
T  12484484 g-tttatgtggcatggctactttggaga-ttttattatatgttgatgag 12484438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 4740766 - 4740675
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||||||| ||||  ||||||||||||||    
T  4740766 tttttgcatcaaatcttcgtattttcatcccgaatcagctccaaatc-cctttcttttgctccaagacgcaacctttagaatatttgttcctg 4740675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 436
Target Start/End: Original strand, 16165932 - 16166041
Alignment:
Q  329 tttttatgactttatgagattt-atcactcagtttgttgagatt-ggagatttattttggtgatgtattatgaaatatttggcatggctaccttgaagat 426  Q
    |||||||||| | ||||||||| ||||| |||||| |||||||| ||| |||||||||||||||||||||||| |||| |||||||||||| ||| ||||    
T  16165932 tttttatgacatgatgagattttatcacccagtttattgagatttggaaatttattttggtgatgtattatgatatatgtggcatggctactttggagat 16166031  T
Q  427 ttttattata 436  Q
    ||||||||||    
T  16166032 ttttattata 16166041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 17794176 - 17794327
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgt-ttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaact 97  Q
    |||| |||||||||| |||||| |||||||||||| ||| |||| ||||| |  ||||| |||||||| |||||||| ||||||| | ||| ||| | ||    
T  17794176 cacggccgtgtggctcgaggcacgggccgtgccaactct-ctgacttggtagggttcatatttttgcaccaaatctttgtatttttagcccaaattagct 17794274  T
Q  98 ccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  17794275 ccaaatctcctttcttttgctccaagactaaatctttcaaatatttgttcctg 17794327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 23348487 - 23348569
Alignment:
Q  68 aaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||| |||| |||| ||| |||||||||||||||    
T  23348487 aaatctttgtattttcaacccgaatcagctccaaatctcatttcttttgctccaagactcaatttttgaaatatttgttcctg 23348569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 4206022 - 4205931
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||||||||||| ||||||||| || |||||| ||||| ||||||||| |||||||| ||||  ||||||||||||||    
T  4206022 tttttgcatcaaatcttcgtattttcatcccgaatcagcttcaaatc-ccttttttttgctccaagacgcaacctttagaatatttgttcctg 4205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 28734389 - 28734519
Alignment:
Q  6 ccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaat 103  Q
    |||||||||||| |||| | ||||||||||| ||||||| ||||   || ||| |||||||||  |||||||||||||||| ||||||||| ||||||||    
T  28734389 ccgtgtggctggtggcacgtgccgtgccaag-cttctgacttggggattacatatttttgcattcaatcttcgtattttcagcccgaatcagctccaaat 28734487  T
Q  104 ctcctttcttttgctcctagacgcaatctttc 135  Q
    ||||||||||||||||| ||||  ||||||||    
T  28734488 ctcctttcttttgctccaagactaaatctttc 28734519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 25031458 - 25031603
Alignment:
Q  6 ccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaat 103  Q
    |||||||||||  |||| ||||||||||||| ||||||| ||||  | ||||| |||||||| |||||||||||||||| |  | |||||| ||||||||    
T  25031458 ccgtgtggctgatggcacgggccgtgccaag-cttctgacttgggggattcatatttttgcaccaaatcttcgtatttttagtctgaatcagctccaaat 25031556  T
Q  104 ctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||| ||||||||||| | |||| |||||||| |||||||| ||||||    
T  25031557 ctcatttcttttgctgcaagactcaatctttaaaatatttattcctg 25031603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 26821664 - 26821574
Alignment:
Q  56 attttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    |||||||| | ||||||||||| |||||||||||||||| ||||||||| | ||||||||||||| | || |||||||| |||||||||||    
T  26821664 attttttgtaccaaatcttcgtcttttcaacccgaatcagctccaaatcacatttcttttgctccaaaacacaatctttaaaatatttgtt 26821574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 15471450 - 15471531
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||||||   ||||||||||||||||||||||||||||||||||| |||| |||||||| || ||||||||||||    
T  15471450 aatcttcatatttttggcccgaatcaactccaaatctcctttcttttgctccgagactcaatctttgaactatttgttcctg 15471531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 22601658 - 22601739
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||| ||| |||||||    
T  22601658 aatcttcatattttcaacccgaatcagctccaaatcctctttcttttgctcctagactcaatctatcaaacattcgttcctg 22601739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 24545916 - 24546004
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |||| ||||||||  |||||||||||    
T  24545916 tttttgcaccgaatcttcgtattttcatcccgaatcagctccaaatc-cctttcttttgctccaagactcaatctttagaatatttgttc 24546004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 3923457 - 3923365
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| |||||||||||||||| |   ||||||| ||||||||||| ||||||||||||| |||| ||||||||  ||||||||||||||    
T  3923457 tttttgcaccaaatcttcgtatttttagttcgaatcagctccaaatctcatttcttttgctccaagactcaatctttagaatatttgttcctg 3923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 12658299 - 12658359
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12658299 aatcagctccaaatctcctttcttttgctccaagactcaatctttcaaatatttgttcctg 12658359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 12660791 - 12660851
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  12660791 aatcagctccaaatctcctttcttttgctccaagactcaatctttcaaatatttgttcctg 12660851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 29093403 - 29093253
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactc 98  Q
    ||||||||||||||||| ||||  |||||||||||| ||||||| ||||  |  || | ||||||  | ||||||||||||||||||||||||||| |||    
T  29093403 cacgaccgtgtggctggtggcacaggccgtgccaag-cttctgacttgggggaatcgtatttttgtcttaaatcttcgtattttcaacccgaatcagctc 29093305  T
Q  99 caaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    | ||||  |||||||||||||| |||| |||| |||||| |||| |||||||    
T  29093304 ctaatcctctttcttttgctccaagactcaatttttcaattattcgttcctg 29093253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 20464068 - 20463990
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||| ||||||   ||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  20464068 aatcttcatatttttggcccgaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttc 20463990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 18973418 - 18973326
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||  ||||||| ||||||   ||| ||||| ||| ||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  18973418 tttttgcatagaatcttcatatttttggcccaaatcagctcgaaatcacctttcttttgctccaagacgcaatctttcgaatatttgttcctg 18973326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 15171963 - 15171884
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcc 148  Q
    ||||||| ||||||   ||||||||||||||||||||| ||||||||||||| |||| |||||||| || ||||||||||    
T  15171963 aatcttcatatttttggcccgaatcaactccaaatctcatttcttttgctccgagactcaatctttgaactatttgttcc 15171884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 1122916 - 1122835
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  1122916 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 1122835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 12478701 - 12478750
Alignment:
Q  350 tatcactcagtttgttgagattggagatttattttggtgatgtattatga 399  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  12478701 tatcactcagcatgttgagattggagatttattttggtgatgtattatga 12478750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 25923632 - 25923779
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtt-tcat-tttttgcatcaaatcttcgtattttcaacccgaatcaact 97  Q
    |||| |||||||||||| |||| ||||||||||||| ||||||| ||||  | | |||| |||||| | | |||||| ||||||||||||||||||| ||    
T  25923632 cacggccgtgtggctggtggcacgggccgtgccaag-cttctgacttgggggatgtcatatttttgtaccgaatctttgtattttcaacccgaatcacct 25923730  T
Q  98 ccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||| | ||||||||||||||  |||| ||||||||  |||||||||||    
T  25923731 ccaaa-cccctttcttttgctctaagactcaatctttagaatatttgttc 25923779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 15161956 - 15161876
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||| | || ||||||||||||||||||| |||||||| ||| |||| |||||||| || |||||||||||    
T  15161956 aatcttcatatttttagcctgaatcaactccaaatctccgttcttttgttccaagactcaatctttgaactatttgttcct 15161876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 324 - 396
Target Start/End: Original strand, 19971417 - 19971489
Alignment:
Q  324 tttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtatta 396  Q
    ||||||||| ||| ||||||||||||| |||||||  ||| |||||||||||||||  |||||||||||||||    
T  19971417 tttatttttcatgtctttatgagatttttcactcatattgatgagattggagattttatttggtgatgtatta 19971489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 398
Target Start/End: Complemental strand, 24216949 - 24216851
Alignment:
Q  299 tgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtattatg 398  Q
    |||||||| |||| |||| ||||  ||| ||||||||| ||||||||||||| ||||||| | |||||||||| |||||||  |||||| ||||||||||    
T  24216949 tgattagggtgtcggtcttttgtcgttt-ttttttatgtctttatgagatttgtcactcattatgttgagatttgagattttatttggttatgtattatg 24216851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 25606718 - 25606636
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   | |||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  25606718 caaatcttcgtattttcgtacagaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 25606636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 25949041 - 25948982
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||  |||||||||||    
T  25949041 cgaatcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 25948982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 30245033 - 30244954
Alignment:
Q  71 tcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||  |||||||||| |||| ||||  |||||||||||||| |||| |||||| ||||||||| |||||||    
T  30245033 tcttcgtatttttcacccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaatattcgttcctg 30244954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 23603601 - 23603682
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   ||||||||||| ||||| |||||||||||||||| |||| |||||  ||||||||| ||||||    
T  23603601 caaatcttcgtattttcgtaccgaatcaacttcaaat-tcctttcttttgctccaagactcaatccatcaaatattcgttcct 23603682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 12657616 - 12657697
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| |||||||  |||||||||||||||| |||| |||||  ||||||||| |||||||    
T  12657616 aatcttcgtattttcgtaccgaatcagctccaaaattcctttcttttgctccaagactcaatccatcaaatattcgttcctg 12657697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 18627202 - 18627122
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||| ||||||| | ||||||||| ||||||||||||||| |||  ||||||||  ||||||| ||||||    
T  18627202 aatcttcgtattttcagcccgaattagctccaaatc-cctttcttttgctccaagattcaatctttagaatatttattcctg 18627122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 19993370 - 19993289
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||| | | ||||||||| |||||||  |||||||||||||| ||||  |||||||  ||||||||||||||    
T  19993370 aatcttcgtattttaagcacgaatcaacaccaaatcctctttcttttgctccaagactgaatctttagaatatttgttcctg 19993289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 20222239 - 20222182
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||| ||||||||||| ||||||||||||| |||| |||||||||| ||||||||||    
T  20222239 aatcagctccaaatctcatttcttttgctccaagactcaatctttcatatatttgttc 20222182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 22116223 - 22116166
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||| ||||||||||| ||||||||||||| |||| |||||||||| ||||||||||    
T  22116223 aatcagctccaaatctcatttcttttgctccaagactcaatctttcatatatttgttc 22116166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 29253709 - 29253648
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||| | |||||||||||||||| |||| | |||||||||||||||||||||    
T  29253709 cgaatcagctccaattatcctttcttttgctccaagactccatctttcaaatatttgttcct 29253648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 24393245 - 24393305
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||||| | ||||||||||||| |||||| ||||||| ||||||||||||||    
T  24393245 aatcagctccaaatcacatttcttttgctccaagacgctatctttcgaatatttgttcctg 24393305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 17814360 - 17814278
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  17814360 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 17814278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 19613102 - 19613161
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||| |||||||||  |||||||||||||| ||||| ||||||| ||||||||||||    
T  19613102 cgaatcagctccaaatcagctttcttttgctccaagacgtaatctttgaaatatttgttc 19613161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 24218541 - 24218459
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  24218541 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 24218459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 25615056 - 25614974
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   | |||||| ||||||||| ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  25615056 caaatcttcgtattttcgtactgaatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 25614974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 26138467 - 26138376
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||| |||||| ||||||   | ||||| | ||| || |||||||||||||||||| |||| | |||||||||||||||||||||    
T  26138467 tttttgtatcagatcttcatatttttggcacgaattagctcaaattctcctttcttttgctccaagactccatctttcaaatatttgttcct 26138376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 8603284 - 8603206
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||||||||||  |||||||||| |||| ||||  |||||||||||||  |||| |||||| ||||||||| ||||    
T  8603284 aatcttcgtatttttcacccgaatcagctcctaatcctctttcttttgctcaaagactcaatctatcaaatattcgttc 8603206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 13217638 - 13217688
Alignment:
Q  100 aaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  13217638 aaatctcctttcttttgctccaagactaaatctttgaaatatttgttcctg 13217688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 23517657 - 23517719
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatc-tttcaaatatttgttcctg 150  Q
    |||||| |||||| | |||||||||||||||| |||| ||||| |||||||||||||||||||    
T  23517657 gaatcagctccaattatcctttcttttgctccaagactcaatcttttcaaatatttgttcctg 23517719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 23574982 - 23575044
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatc-tttcaaatatttgttcctg 150  Q
    |||||| |||||| ||||||||||| |||||| |||| ||||| |||||||||||||||||||    
T  23574982 gaatcagctccaattctcctttcttctgctccaagactcaatcttttcaaatatttgttcctg 23575044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 25963641 - 25963579
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||  |||| ||||||||  ||||||||||||||    
T  25963641 cgaatcagctccaattctcctttcttttgctctaagactcaatctttagaatatttgttcctg 25963579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 25968288 - 25968226
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||  |||| ||||||||  ||||||||||||||    
T  25968288 cgaatcagctccaattctcctttcttttgctctaagactcaatctttagaatatttgttcctg 25968226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 29360098 - 29360020
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||||||||||  |||||||||| |||  ||||  |||||||||||||| ||||  ||||| ||||||||||||||    
T  29360098 aatcttcgtatttttcacccgaatcagctcataatcctctttcttttgctccaagacttaatctatcaaatatttgttc 29360020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 2181772 - 2181699
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  2181772 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 2181699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 5950011 - 5950064
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||| | |||| | |||||||||||||||||||||    
T  5950011 ctccaattctcctttcttttgcttcaagactccatctttcaaatatttgttcct 5950064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 18195816 - 18195897
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  18195816 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 18195897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 18448552 - 18448471
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    || ||||| ||||||| | |||||||||||||||||||| |||||  ||||||||| |||||||    
T  18448552 aatcttcgtatttttgctccaaatcagctccaaaacccctttcttttgctcctagactcaatccatcaaatattcgttcctg 18448471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 25402750 - 25402831
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||  |||| |||||  ||||||||| |||||||    
T  25402750 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctcaaagactcaatccatcaaatattcgttcctg 25402831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 25507367 - 25507306
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||| ||||||||||||| |||| |||| | ||||||||||||||| |||||    
T  25507367 cgaatcagctccaattctcctttctttttctccaagactccatctttcaaatattttttcct 25507306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 210438 - 210501
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatc 131  Q
    ||||||||||||||||||  |||||||| ||||||||| ||||||||||| ||| |||| |||||    
T  210438 caaatcttcgtattttcataccgaatcagctccaaatc-cctttcttttgatccaagactcaatc 210501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 18234146 - 18234206
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||| |||| |||| |||||||| |||| | |||||||||||||||||||||    
T  18234146 gaatcagctccaattctcttttcctttgctccaagactccatctttcaaatatttgttcct 18234206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 31965921 - 31965980
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||| |||||||||| |||  |||| ||||| |||||||||||||    
T  31965921 aatcaactccaaatctcctt-cttttgctccaagattcaatttttcatatatttgttcctg 31965980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 16469879 - 16469961
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||    ||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  16469879 caaatcttcgtattttcgtatcgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 16469961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 6794735 - 6794661
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||| || |||||| || | ||||  |||||||||||||| |||| |||||| ||||||||| ||||    
T  6794735 ttcgtattttcatcctgaatcagcttctaatcctctttcttttgctccaagactcaatctatcaaatattcgttc 6794661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 14077547 - 14077625
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| ||||    
T  14077547 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 14077625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 32542968 - 32542914
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| |||||||||||||||||| ||||  |||||||  ||||||||||||||    
T  32542968 ctccaattctcctttcttttgctccaagactaaatctttagaatatttgttcctg 32542914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 12993609 - 12993682
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||  |||| |||||| |||||||||    
T  12993609 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctcaaagactcaatctatcaaatatt 12993682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 18732134 - 18732053
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| |||||||   ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  18732134 aatcttcgtatttttgcaccgaatcagctccaaaatccctttcttttgctccaagactcaatccatcaaatattcgttcctg 18732053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 18822673 - 18822592
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  18822673 aatcttcgtatttttgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 18822592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 19270182 - 19270254
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||| |||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  |||||||||    
T  19270182 aatcttcctattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccgtcaaatatt 19270254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 23297712 - 23297793
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||  ||||| || ||||||| |   ||||||||||||| |||| |||||  ||||||||| |||||||    
T  23297712 aatcttcgtattttcataccgaaacagctccaaaaccattttcttttgctccaagactcaatccatcaaatattcgttcctg 23297793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 35271231 - 35271151
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   | ||||||||||||| || ||||||||||||||| |||| |||||  || |||||| |||||||    
T  35271231 aatcttcgtattttcgtactgaatcaactccaagtc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 35271151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 17739395 - 17739335
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||| |||||||| |||||||||||||||||| ||||  |||| ||  |||||||||||||    
T  17739395 gaattaactccaattctcctttcttttgctccaagactaaatcctttgaatatttgttcct 17739335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 18854408 - 18854348
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  18854408 aatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 18854348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 451
Target Start/End: Original strand, 23295401 - 23295503
Alignment:
Q  348 tttatcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggctaccttgaagattttta-ttatatgttgatgag 446  Q
    ||||||||||| | ||||||| ||  ||||||||| ||  ||||||||||| | ||| |||||| |||| |||| ||||||||| |||| ||||||||||    
T  23295401 tttatcactcaatatgttgaggtttcagatttattctgtagatgtattatg-attatgtggcatagcta-cttggagatttttatttatctgttgatgag 23295498  T
Q  447 atatt 451  Q
    |||||    
T  23295499 atatt 23295503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 26017713 - 26017621
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttctttt-gctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||| |||||| ||||||   | ||||| | |||||| |||||||| |||| ||||| |||| | |||||||||||||||||||||    
T  26017713 tttttgtatcagatcttcatatttttggcacgaattagctccaattctcctttttttttgctccaagactccatctttcaaatatttgttcct 26017621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 26157086 - 26156994
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttctttt-gctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||| |||||| ||||||   | ||||| | |||||| |||||||| |||| ||||| |||| | |||||||||||||||||||||    
T  26157086 tttttgtatcagatcttcatatttttggcacgaattagctccaattctcctttttttttgctccaagactccatctttcaaatatttgttcct 26156994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 318 - 448
Target Start/End: Original strand, 35529 - 35658
Alignment:
Q  318 ttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggctac 417  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| ||     
T  35529 ttgttatttatgtttcatgactttatgagatttatcacccagtttgttgagattagagatttattttggtgatgtattatgatatatgtggcatggata- 35627  T
Q  418 cttgaagatttttattatatgttgatgagat 448  Q
    ||||||||||||  |||  ||||||||||||    
T  35628 cttgaagattttatttaactgttgatgagat 35658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 5513895 - 5514032
Alignment:
Q  15 tggaggcaagggccgtgccaagtcttctgattggttgt-ttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttct 112  Q
    ||||| || ||||||||||||| |||||| |||||||  ||||| |||||||||||||| ||| ||||||   ||||||||| ||| ||||||| |||||    
T  5513895 tggagacacgggccgtgccaagccttctggttggttggcttcatatttttgcatcaaattttcttatttttggcccgaatcagctctaaatctcatttct 5513994  T
Q  113 tttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  5513995 tttgctccaagactcaatctttcaaatatttgttcctg 5514032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 22181329 - 22181421
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| ||||||||||||||||   ||||||||| |||| |||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  22181329 tttttgcaccaaatcttcgtatttttggcccgaatcagctccgaatctcctttcttttgctccaagactcaatctttgaaatatttgttcctg 22181421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 9856979 - 9856898
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||  ||| |||||| ||||| ||| |||||||    
T  9856979 aatcttcgtattttcaacccgaatcagctccaaatcttctttcttttgctccatgactcaatctatcaaacattcgttcctg 9856898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 19076007 - 19075883
Alignment:
Q  319 tgttatttattttttatgactttatgagattta--tcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggcta 416  Q
    |||||||||  |||||||||||  ||||||||   ||||| ||| ||||||||||||||||||||||||||||||||| ||| | | |||| ||| ||||    
T  19076007 tgttatttacattttatgacttgttgagattttattcacttagtatgttgagattggagatttattttggtgatgtatcatg-attgtttgacatagcta 19075909  T
Q  417 ccttgaagatttttattatatgttga 442  Q
    | ||| ||||||||||||| ||||||    
T  19075908 ctttggagatttttattatctgttga 19075883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 11922721 - 11922810
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||| ||||||||| ||||||   || |||| ||||||||||||||||||||||||||| | || |||||||| ||||||||||||    
T  11922721 tttttgcaccaaatcttcatatttttggcctgaataaactccaaatctcctttcttttgctccaatacacaatctttgaaatatttgttc 11922810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 9488704 - 9488764
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  9488704 aatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttcctg 9488764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 16212678 - 16212738
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||| |||||||||||||    
T  16212678 aatcaactccaaatttcctttcttttgctccaagactcaatctttcatatatttgttcctg 16212738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 21515808 - 21515717
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| | |||||||||||||||||||||||||| |||||||||| || ||||||||| | |||| ||||| ||  ||||||||||||||    
T  21515808 tttttgcaccgaatcttcgtattttcaacccgaatcagctccaaatct-ctctcttttgctgcaagactcaatcattagaatatttgttcctg 21515717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 10631170 - 10631089
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  10631170 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 10631089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 10821800 - 10821719
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  10821800 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 10821719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 20617965 - 20617884
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  20617965 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatcaatcaaatattcgttcct 20617884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 40032 - 40113
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||||||| |||  ||||  |||||||||||||  |||| |||||| ||||||||| |||||||    
T  40032 aatcttcgtattttcaacccgaatcagctcataatcctctttcttttgctcaaagactcaatctatcaaatattcgttcctg 40113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 7196989 - 7196912
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| |||| ||||  ||||||||||||||||||| |||||| ||||| ||| |||||||    
T  7196989 ttcgtattttcatcccgaatcagctcctaatcctctttcttttgctcctagactcaatctatcaaacattcgttcctg 7196912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 16374936 - 16375017
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| ||||||||||||||||| |||| |||||  ||||||||| |||||||    
T  16374936 aatcttcgtattttcgtaccgaatcatctccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttcctg 16375017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 24125572 - 24125633
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||| |||||||||||||||||| |||| |||||||| ||||||||||||||    
T  24125572 cgaatcagctccaattctcctttcttttgctccaagactcaatctttaaaatatttgttcct 24125633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 5675215 - 5675124
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||  ||||||| ||||||   | ||||||| || ||||| || ||||||||||||| |||| |||||||||||||||||||||||    
T  5675215 tttttgcatagaatcttcatatttttgccgcgaatcagcttcaaatttcatttcttttgctccaagactcaatctttcaaatatttgttcct 5675124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 16218115 - 16218197
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  16218115 caaatcttcgtattttcgtaccgaatcatctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 16218197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 16221435 - 16221517
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  16221435 caaatcttcgtattttcgtaccgaatcatctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 16221517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 18292359 - 18292276
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  18292359 caaatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 18292276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 11902977 - 11903039
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  11902977 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 11903039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 13622057 - 13621996
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  |||||||||||||    
T  13622057 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcct 13621996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 18286793 - 18286712
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  18286793 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 18286712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 21102529 - 21102607
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  || ||||||||||    
T  21102529 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatatttgtt 21102607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 15409769 - 15409707
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||| || |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  15409769 cgaatcagctcaaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 15409707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 38651911 - 38651853
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||| |||||| |||||||||||||||||| |||| ||||||||  |||||||||||    
T  38651911 gaatcagctccaattctcctttcttttgctccaagactcaatcttttgaatatttgttc 38651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 45234048 - 45234110
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||| ||||||||| |||| ||||||||  ||||||||||||||    
T  45234048 cgaatcagctccaattctccttttttttgctccaagactcaatctttagaatatttgttcctg 45234110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 16226811 - 16226738
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||||||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  16226811 aatcttcgtatttttgcaccgaatcaactccaaaacccctttcttttgctccaagactcaatccatcaaatatt 16226738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 17995910 - 17995837
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  17995910 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 17995837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 18242009 - 18241929
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    || ||||||||||||| | ||||||||||||||| |||| |||||| ||||||||| |||||||    
T  18242009 aatcttcgtatttttgctccaaatcaactccaaacc-cctttcttttgctccaagactcaatctatcaaatattcgttcctg 18241929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 25146013 - 25145940
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  25146013 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 25145940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 6518179 - 6518116
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatc 131  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||    
T  6518179 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatc 6518116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 20059467 - 20059541
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||||    ||||||| ||||||| | ||||||||||||||| |||| |||||| |||||||||    
T  20059467 caaatcttcgtattttcgttacgaatcagctccaaacc-cctttcttttgctccaagactcaatctatcaaatatt 20059541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 16951697 - 16951619
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||||   |||||||| ||||||| |  |||||||||||||| |||| |||||  ||||||||| ||||    
T  16951697 aatcttcgtattttcgtaccgaatcagctccaaaacctctttcttttgctccaagactcaatccatcaaatattcgttc 16951619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 33331245 - 33331279
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaa 35  Q
    |||||||||||||||||||||| ||||||||||||    
T  33331245 cacgaccgtgtggctggaggcacgggccgtgccaa 33331279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 11502081 - 11502134
Alignment:
Q  97 tccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||||||||||||||||| |||| |||||  ||||||||| |||||||    
T  11502081 tccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttcctg 11502134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 12844704 - 12844631
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||| |||||||   |||||||| ||||||||| | ||||||||||||| |||| |||||  |||||||||    
T  12844704 aatcttcatattttcgtaccgaatcagctccaaatcccttttcttttgctccaagactcaatccatcaaatatt 12844631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 17484708 - 17484788
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    || ||||||||||||| ||| ||||||||||||| |||| |||||  ||||||||| |||||||    
T  17484708 aatcttcgtatttttgctccaaatcaactccaaacctc-tttcttttgctccaagactcaatccatcaaatattcgttcctg 17484788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 18421018 - 18421067
Alignment:
Q  350 tatcactcagtttgttgagattggagatttattttggtgatgtattatga 399  Q
    ||||||||||| ||||||||||||| ||||  |||||||| |||||||||    
T  18421018 tatcactcagtatgttgagattggatattttatttggtgaagtattatga 18421067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 26810933 - 26810853
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  26810933 aatcttcgtatttttgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 26810853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 33331366 - 33331447
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||||||   ||| ||||| ||||||||||| ||||||||||||| ||||   |||||| ||||| |||||||||    
T  33331366 aatcttcatatttttggccctaatcagctccaaatctcatttcttttgctccaagacttgatctttaaaatacttgttcctg 33331447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 48641446 - 48641373
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||||||||||| | || |||||||||||| |||| |||||  |||||||||    
T  48641446 aatcttcgtatttttgctccgaatcaactccaaaacccccttcttttgctccaagactcaatccatcaaatatt 48641373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 3772558 - 3772618
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| |||||| |||| ||||||||||||| ||||  |||||||  ||||||||||||||    
T  3772558 aatcagctccaattctcttttcttttgctccaagactaaatcttttgaatatttgttcctg 3772618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 448
Target Start/End: Original strand, 12452951 - 12453048
Alignment:
Q  348 tttatcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggctaccttgaagatttttattatatgttgatgaga 447  Q
    ||||||||||||| ||||||| |   ||||||| ||||| ||||||||||| | ||| ||||||||||| |||| |||||||| |||  |||||||||||    
T  12452951 tttatcactcagtatgttgaggtgtcagattta-tttggagatgtattatg-attatgtggcatggcta-cttgtagattttttttaactgttgatgaga 12453047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 61; Significance: 5e-26; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 520533 - 520441
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| || ||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  520533 tttttgtattaaatcttcgtattttcagcccgaatcagccccaaatctcctttcttttgctccaagactcaatctttaaaatatttgttcctg 520441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 49637 - 49718
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  49637 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 49718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 425316 - 425389
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  425316 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 425389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 158841 - 158768
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||| ||||||||| |||| |||||  |||||||||    
T  158841 aatcttcgtattttcgcaccgaatcagctccaaaacccctttgttttgctccaagactcaatccatcaaatatt 158768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 13799696 - 13799845
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactc 98  Q
    ||||||||||||||||| |||| ||||||||||||| ||||||| ||||  |  |||| |||||| ||  |||||| ||||||||||||||||||| |||    
T  13799696 cacgaccgtgtggctggtggcacgggccgtgccaag-cttctgacttgggggagtcatatttttgtattgaatctttgtattttcaacccgaatcagctc 13799794  T
Q  99 caaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| ||||||||||||||| |||| ||||||||  ||||||||||||||    
T  13799795 caaatc-cctttcttttgctccaagactcaatctttataatatttgttcctg 13799845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 28764183 - 28764262
Alignment:
Q  71 tcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||||| | |||||||  |||||||||||||| | || ||||||||||| ||||||||||||    
T  28764183 tcttcgtattttcaacccgaatcagccccaaatcctctttcttttgctccaaaactcaatctttcaattatttgttcctg 28764262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 26191977 - 26191913
Alignment:
Q  86 cccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||||||||| |||||||||||||    
T  26191977 cccgaatcacctccaaatcttctttcttttgctccaagactcaatctttcatatatttgttcctg 26191913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 38045129 - 38045048
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  38045129 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatcaatcaaatattcgttcct 38045048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 25726730 - 25726649
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||||||| || ||||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  25726730 aatcttcgtattgtcaacccgaatcagcttcaaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 25726649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 25735138 - 25735057
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||||||| || ||||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  25735138 aatcttcgtattgtcaacccgaatcagcttcaaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 25735057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 28206651 - 28206732
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| ||||||||||||||||| |||| |||||  ||||||||| |||||||    
T  28206651 aatcttcgtattttcgtaccgaatcagctccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttcctg 28206732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 25405334 - 25405390
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||    
T  25405334 aatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgtt 25405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 16431284 - 16431222
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  16431284 cgaatcagctccaattctcctttcttttgctccaagacccaatctttagaatatttgttcctg 16431222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 44537976 - 44537918
Alignment:
Q  92 tcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  44537976 tcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 44537918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 48256028 - 48255966
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||| || |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  48256028 cgaatcaactctaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 48255966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 19364443 - 19364366
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| |||| ||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  19364443 ttcgtattttcatcccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 19364366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 30819392 - 30819453
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||| |||||| |||| ||||||||||||  |||| ||||||||||||||||||||||||    
T  30819392 gaatcagctccaattctcatttcttttgctctaagactcaatctttcaaatatttgttcctg 30819453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 16148752 - 16148844
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||  ||| ||||||||||| |  |||||||| ||||||||||| ||||||||| ||| |||| || |||||  ||||||||||||||    
T  16148752 tttttgcacaaaaccttcgtatttttagtccgaatcagctccaaatctcatttcttttgttccaagactcattctttagaatatttgttcctg 16148844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 16382404 - 16382464
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||||||| ||||||||||||| |||| |||||||| |||||||| ||||||    
T  16382404 aatcagctccaaatctcatttcttttgctccaagactcaatctttgaaatattttttcctg 16382464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 2386034 - 2385951
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  2386034 caaatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 2385951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 16385262 - 16385321
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||| ||||||| ||| ||||||||||||| |||| |||||||| ||||||||||||||    
T  16385262 aatcagctccaaacctcatttcttttgctccaagactcaatctttaaaatatttgttcct 16385321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 17716468 - 17716406
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| || ||||||||||||||| |||| ||||||||  ||||||||||||||    
T  17716468 cgaatcagctccaattcgcctttcttttgctccaagactcaatctttagaatatttgttcctg 17716406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 20861114 - 20861192
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||| ||||||   ||||||||| ||| |||| || ||||||||||||| |||| |||||||| ||||||||||||    
T  20861114 aatcttcatatttttggcccgaatcagctcaaaatatcatttcttttgctccaagactcaatctttaaaatatttgttc 20861192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 52236223 - 52236285
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| ||||  |||||||  ||||||||||||||    
T  52236223 cgaatcagctccaattctcctttcttttgctccaagactgaatctttagaatatttgttcctg 52236285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 20411967 - 20411914
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||| ||||||||||||| |||| | |||||||||||||||||||||    
T  20411967 ctccaattctcgtttcttttgctccaagactccatctttcaaatatttgttcct 20411914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 21792657 - 21792730
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  21792657 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 21792730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 23495269 - 23495350
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||| | |||| |||||  ||||||||| |||||||    
T  23495269 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctacaagactcaatccatcaaatattcgttcctg 23495350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 27911618 - 27911699
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  27911618 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 27911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 23298591 - 23298531
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||| ||||||||||||||||||||| |||  |||||||| ||||||| |||||||    
T  23298591 aatcagctctaaatctcctttcttttgctccaagattcaatcttttaaatattcgttcctg 23298531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 22135963 - 22135881
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||   ||||||| ||||||||| | ||||||||||||| |||| |||||  || |||||| |||||||    
T  22135963 caaatcttcgtattttcataacgaatcagctccaaatc-cttttcttttgctccaagactcaatccatccaatattcgttcctg 22135881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 26134876 - 26134938
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||| || |||||||||||||||||  |||| ||||||||  ||||||||||||||    
T  26134876 cgaatcagctcaaattctcctttcttttgctctaagactcaatctttagaatatttgttcctg 26134938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 16485090 - 16485009
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || |||||  |||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  16485090 aatcttcgtattttcgtaccaaatcagttccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 16485009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 17986349 - 17986272
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||| | |||  ||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  17986349 ttcgtattttcatcccgaattagctcataatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 17986272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 18885660 - 18885733
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  18885660 aatcttcgtatttttgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 18885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 22660364 - 22660444
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  22660364 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 22660444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 1188 - 1096
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| ||||||||||||||||   | ||||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  1188 tttttgcaccaaatcttcgtatttttggctcgaatcagctccaaatctcctttcttttgctccaagactcaatctttgaaatatttgttcctg 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 23093 - 23185
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||| |||||||| ||||||   ||||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  23093 tttttgcataaaatcttcatatttttggcccgaatcagctccaaatcacctttcttttgctccaagacgcaatctttcgaatatttgttcctg 23185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 54273 - 54320
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgct 118  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||||    
T  54273 aatcttcgtattttcagcc-gaatcaactccaaatc-cctttcttttgct 54320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 8e-22; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 58 - 147
Target Start/End: Complemental strand, 22170570 - 22170481
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||| |||| |||| |||  |||||||||||    
T  22170570 tttttgcaccaaatcttcgtattttctgtccgaatcaactccaaatctcctttcttttgctccaagactcaatatttagaatatttgttc 22170481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 12410365 - 12410220
Alignment:
Q  6 ccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgtttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaat 103  Q
    |||||||||||| |||| ||||||||||||| ||||||| ||||  |  |||| |||||||||  |||||||||||||||| | ||||||| ||||||||    
T  12410365 ccgtgtggctggtggcacgggccgtgccaag-cttctgacttgggggaatcatatttttgcattcaatcttcgtattttcagcacgaatcagctccaaat 12410267  T
Q  104 ctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |  ||||||||||| || | || ||||||||  ||||||||||||||    
T  12410266 cctctttcttttgcgccaaaactcaatctttagaatatttgttcctg 12410220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 20725157 - 20725226
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaa 138  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||| |||| |||||| |||||    
T  20725157 aatcttcgtattttcaacccgaatcagctccaaatcctctttcttttgctccaagactcaatctatcaaa 20725226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 24165035 - 24164954
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||||||| |||| |||||| || |||||| |||||||    
T  24165035 aatcttcgtattttcaacccgaatcaactcctaatcctctttctattgctccaagactcaatctatcgaatattcgttcctg 24164954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 428
Target Start/End: Original strand, 20846724 - 20846856
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttattttttatgactttatgagattt-atcactcagtttgttgagattggagatttatttt-ggtgatgtatt 395  Q
    ||||||||||| | |||| || |||  |||| ||||||| || ||||| |||| |||||||||| |||||||||| || ||||||||| |||||||||||    
T  20846724 ctgattaggatatatgtccgtcgttgcttatattttatgtctgtatgaaattttatcactcagtatgttgagattagatatttatttttggtgatgtatt 20846823  T
Q  396 atgaaatatttggcatggctaccttgaagattt 428  Q
     ||| || | |||||||||||| ||||||||||    
T  20846824 gtgatatctatggcatggctactttgaagattt 20846856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 24164753 - 24164693
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||| |||||||||||||    
T  24164753 aatcatctccaaatctcctttcttttgctccaagactcaatctttcatatatttgttcctg 24164693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 31758426 - 31758517
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| | |||||||||||||||| ||||||||| ||||||||| ||||||||||||||| | || ||||||||  ||||||| ||||||    
T  31758426 tttttgcaccgaatcttcgtattttcatcccgaatcagctccaaatc-cctttcttttgctccaaaactcaatctttagaatatttattcctg 31758517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 28835205 - 28835286
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||  |||| |||||  ||||||||| ||||||    
T  28835205 caaatcttcgtattttcataccgaatcaactccaaatc-cctttcttttgctcaaagactcaatcaatcaaatattcgttcct 28835286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 41766042 - 41766123
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  41766042 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 41766123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 20450116 - 20450198
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||  |||||||    
T  20450116 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatatccgttcctg 20450198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 20444635 - 20444708
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatat 141  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||    
T  20444635 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatat 20444708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 20967486 - 20967424
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  20967486 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 20967424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 24214534 - 24214453
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  || |||||| ||||||    
T  24214534 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcct 24214453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 21389445 - 21389368
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| |||| ||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  21389445 ttcgtattttcatcccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 21389368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 34223435 - 34223512
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| || | ||||  |||||||||||||| |||| |||||| ||||||||| |||||||    
T  34223435 ttcgtattttcatcccgaatcagcttctaatcctctttcttttgctccaagactcaatctatcaaatattcgttcctg 34223512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 15059171 - 15059111
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcc 148  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||    
T  15059171 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcc 15059111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 23029969 - 23030028
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| || |||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  23029969 aatcagctacaaatctcctttcttttgctccaagactcaatctttc-aatatttgttcctg 23030028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 21734882 - 21734965
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   || |||||  |||||| ||||||||||||||||| |||| |||||  ||||||||| |||||||    
T  21734882 caaatcttcgtattttcgtaccaaatcagttccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttcctg 21734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 23343897 - 23343956
Alignment:
Q  91 atcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  23343897 atcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 23343956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 16676851 - 16676793
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcc 148  Q
    ||||| || |||||| | ||||||||||||| |||| ||||||||||||||||||||||    
T  16676851 aatcagcttcaaatcccttttcttttgctccaagactcaatctttcaaatatttgttcc 16676793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 22940869 - 22940792
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| || | ||||  |||||||||||||| | || |||||| ||||||||| |||||||    
T  22940869 ttcgtattttcatcccgaatcagcttctaatcctctttcttttgctccaatactcaatctatcaaatattcgttcctg 22940792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 23267482 - 23267401
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||| | |||| |||||  ||||||||| |||||||    
T  23267482 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgcttcaagactcaatccatcaaatattcgttcctg 23267401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 23583235 - 23583316
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  23583235 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 23583316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 23600432 - 23600513
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  23600432 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 23600513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 25486059 - 25486112
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||  |||| | |||||||||||||||||||||    
T  25486059 ctccaattctcctttcttttgctcaaagactccatctttcaaatatttgttcct 25486112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 24143520 - 24143600
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||||||||||   | ||||||| |||||||||  |||||||||||||| ||||  |||||||  |||||||||||||    
T  24143520 aatcttcgtattttacgcacgaatcagctccaaatcctctttcttttgctccaagactgaatctttagaatatttgttcct 24143600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 3387806 - 3387724
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||| |||||   |||||||| ||||||||| ||||||||||||||| |||| ||||   | |||||||||||||||    
T  3387806 caaatcttcgttttttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaattcataaaatatttgttcctg 3387724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 24220166 - 24220084
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| | ||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  24220166 caaatcttcgtattttcgtaccgaatcagcgccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 24220084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 25741468 - 25741386
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||| | |||| |||||  || |||||| |||||||    
T  25741468 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgcttcaagactcaatccatccaatattcgttcctg 25741386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 42790132 - 42790214
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||| |||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  42790132 caaatcttcatattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 42790214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 2953857 - 2953919
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||| ||| ||||  |||||||  ||||||||||||||    
T  2953857 cgaatcagctccaattctcctttcttttgttccaagactaaatcttttgaatatttgttcctg 2953919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 20104312 - 20104358
Alignment:
Q  103 tctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||| |||| | ||||||||||||||| |||||    
T  20104312 tctcctttcttttgctccaagactccatctttcaaatatttattcct 20104358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 17409034 - 17409099
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaa 138  Q
    |||||||||||| ||||||||| |||| ||||  ||||||||| |||| |||| |||||| |||||    
T  17409034 ttcgtattttcatcccgaatcagctcctaatcatctttctttttctccaagactcaatctatcaaa 17409099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Original strand, 20169769 - 20169838
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||| ||||||||| || | ||||  |||| ||||||||| |||| |||||| |||||||||    
T  20169769 ttcgtattttcatcccgaatcagcttctaatcctctttattttgctccaagactcaatctatcaaatatt 20169838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 20799522 - 20799441
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||| ||||||||| |||| |||||  ||||||||| |||||||    
T  20799522 aatcttcgtattttcgtaccaaatcagctccaaaacccctttgttttgctccaagactcaatccatcaaatattcgttcctg 20799441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 21382053 - 21381988
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaa 138  Q
    |||||||||||| |||| ||||||||  ||||  |||||||||||||| |||| |||||| |||||    
T  21382053 ttcgtattttcatcccggatcaactcataatcctctttcttttgctccaagactcaatctatcaaa 21381988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 29053312 - 29053392
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| |||||| || ||||||||||||||| |||| |||||  || |||||| |||||||    
T  29053312 aatcttcgtattttcgtaccgaatcagctccaagtc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 29053392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 26724946 - 26724875
Alignment:
Q  330 ttttatgactttatgagattt--atcactcagtttgttgagattggagatttattttggtgatgtattatga 399  Q
    |||||||||||  ||||||||  ||||||| || |||||||||   ||||||||| ||||||||||||||||    
T  26724946 ttttatgacttgttgagatttttatcactcggtatgttgagatgttagatttattatggtgatgtattatga 26724875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 14000 - 13853
Alignment:
Q  1 cacgaccgtgtggctggaggcaagggccgtgccaagtcttctga-ttggttgt-ttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaact 97  Q
    |||||||||||||||||||||| |||||||||||| ||| || | ||||| |  ||||| |||||||| ||||||||||| |||| | ||  ||||| ||    
T  14000 cacgaccgtgtggctggaggcacgggccgtgccaactct-ctcacttggtaggcttcatatttttgcaccaaatcttcgtgtttttagccaaaatcagct 13902  T
Q  98 ccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||||||||||||||||||| |||   |||||||||||||||||||    
T  13901 ccaaatctcctttcttttgctccaagaataaatctttcaaatatttgtt 13853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 2309 - 2236
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||| |||||||||    
T  2309 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatctatcaaatatt 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 24321635 - 24321497
Alignment:
Q  14 ctggaggcaagggccgtgccaagtcttctgattggttgt-ttcat-tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttc 111  Q
    ||||||||| |||| |||||||| |||||| |||||||  ||||| |||||||| | ||||||| |||||     |||||||| ||||||||||||||||    
T  24321635 ctggaggcacgggctgtgccaagccttctggttggttggcttcatatttttgcacctaatcttcatatttgtgggccgaatcagctccaaatctcctttc 24321536  T
Q  112 ttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| | |||| ||| ||||||||||||||||||||    
T  24321535 ttttgctgcaagactcaacctttcaaatatttgttcctg 24321497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 24177984 - 24178060
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgt 145  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||||| | ||| ||||||    
T  24177984 aatcttcgtattttcaacccgaatcaactccaaatcctctttcttttgctccaagactcaatctataaaacatttgt 24178060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 23257395 - 23257458
Alignment:
Q  87 ccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||| ||||||||||||||||| |||| |||| |||||||| |||||||||||||||    
T  23257395 ccgaatcaacttcaaatctcctttcttttactccaagactcaatctttgaaatatttgttcctg 23257458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 451
Target Start/End: Complemental strand, 17739210 - 17739078
Alignment:
Q  319 tgttatttattttttatgactttatgagatttat-cactcagtttgttgagatt-ggagatttattttggtgatgtattatgaaatatttggcatggcta 416  Q
    |||||||||  |||||||||||||| ||| |||| ||||||||| ||||||||| |||||||||||||| ||||||| |||| | ||| || ||||||||    
T  17739210 tgttatttacattttatgactttataagacttattcactcagtt-gttgagatttggagatttattttgttgatgtagtatg-attatgtgacatggcta 17739113  T
Q  417 ccttgaagatttttattatatgttgatgagatatt 451  Q
    | ||| ||  |||| |||||||||| |||||||||    
T  17739112 ctttggaggattttgttatatgttgttgagatatt 17739078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 25337479 - 25337539
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| |||||||||||| |||||||||||| |||| |||||||| |||||||||||||||    
T  25337479 aatcagctccaaatctccattcttttgctccaagactcaatcttttaaatatttgttcctg 25337539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 446
Target Start/End: Complemental strand, 27498367 - 27498252
Alignment:
Q  331 tttatgactttatgagattt-atcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggctaccttgaagatttt 429  Q
    ||||||||||||||| |||| |||||||| | |||||||| ||||||||  || ||||||||||||||| | | | || |||| | || |||| ||||||    
T  27498367 tttatgactttatgatattttatcactcattatgttgagaatggagattgtttatggtgatgtattatg-attgtatgacatgacaactttgatgatttt 27498269  T
Q  430 tattatatgttgatgag 446  Q
    |||||||||||||||||    
T  27498268 tattatatgttgatgag 27498252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 446
Target Start/End: Complemental strand, 18928383 - 18928254
Alignment:
Q  318 ttgttatttattttttatgactttatgagattta--tcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggct 415  Q
    ||||||||||  |||||||| ||  ||||||||   ||||||||| |||||||||||||||||  || ||||||||||||||| | ||| || |||||||    
T  18928383 ttgttatttacattttatgatttgttgagattttattcactcagtatgttgagattggagattatttatggtgatgtattatg-actatgtgacatggct 18928285  T
Q  416 accttgaagatttttattatatgttgatgag 446  Q
    |  ||| ||||||||||||| || |||||||    
T  18928284 attttggagatttttattatctgctgatgag 18928254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 15583538 - 15583476
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||| ||||||||| ||| ||||||||| |||||||||||||||    
T  15583538 cgaatcagctccaattctcctttattttgctccaagatgcaatctttgaaatatttgttcctg 15583476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 25144554 - 25144635
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  25144554 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 25144635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 28496963 - 28497040
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||| |||| ||||  |||||||||||||| ||||  ||||  ||||||||| |||||||    
T  28496963 ttcgtattttcaacccgaatcagctcctaatcctctttcttttgctccaagacttaatccatcaaatattcgttcctg 28497040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 30949553 - 30949634
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||  |||||||||| |||| ||||  |||||||||||||| |||| |||||| ||| ||||| |||||||    
T  30949553 aatcttcgtatttttcacccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcacatattcgttcctg 30949634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 24371830 - 24371890
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||| |||||||||||||||||||| |||| |||| |||||||||| ||| |||||||||    
T  24371830 aatcagctccaaatctcctttctttttctccaagactcaatctttcatatacttgttcctg 24371890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 20851969 - 20851918
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||| |||||||||||| |||| |||||||| ||||||||||||    
T  20851969 ctccaaatctcccttcttttgctccaagactcaatctttgaaatatttgttc 20851918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 32441755 - 32441814
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  |||||||||||    
T  32441755 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 32441814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 20281769 - 20281707
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| |||| |||  ||||||||||||||    
T  20281769 cgaatcagctccaattctcctttcttttgctccaagactcaatgtttagaatatttgttcctg 20281707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 5500062 - 5500135
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||| ||||||| ||||||||||||||||| |||| |||||  |||||||||    
T  5500062 aatcttcgtatttttgtaccgaatcagctccaaaactcctttcttttgctccaagactcaatccatcaaatatt 5500135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 20635438 - 20635365
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  20635438 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 20635365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 23140340 - 23140393
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||| ||||||||||||| |||| | |||||||||||||||||||||    
T  23140340 ctccaattctcatttcttttgctccaagactccatctttcaaatatttgttcct 23140393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 23552130 - 23552183
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||| ||||||||||||| |||| | |||||||||||||||||||||    
T  23552130 ctccaattctcatttcttttgctccaagactccatctttcaaatatttgttcct 23552183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 25043422 - 25043502
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||||||||||    
T  25043422 aatcttcgtatttttgctccgaatcagctccaaacc-cctttcttttgctccaagactcaatccatcaaatatttgttcctg 25043502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 25858999 - 25859056
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    |||||| || ||| |||||||||||||||||| |||| | ||||||||||||||||||    
T  25858999 gaatcagcttcaattctcctttcttttgctccaagactccatctttcaaatatttgtt 25859056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 27744831 - 27744750
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||   |||||||||| |||| ||||  |||||||||||||| |||| |||||| ||||| ||| |||||||    
T  27744831 aatcttcgtatttatcacccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaacattcgttcctg 27744750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 33181469 - 33181396
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  33181469 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 33181396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 42767651 - 42767732
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  42767651 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 42767732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 11390892 - 11390830
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||| ||||||||||||| |||| ||||||||  ||||| ||||||||    
T  11390892 cgaatcagctccaattctcttttcttttgctccaagactcaatctttagaatatctgttcctg 11390830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 11407553 - 11407491
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||| ||||||||||||| |||| ||||||||  ||||| ||||||||    
T  11407553 cgaatcagctccaattctcttttcttttgctccaagactcaatctttagaatatctgttcctg 11407491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 21344819 - 21344877
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||| |||||||||  |||||||||||||||||||  |||||||  |||||||||||    
T  21344819 gaatcagctccaaatcctctttcttttgctcctagactgaatctttagaatatttgttc 21344877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 21468713 - 21468794
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||||||   |||||||| || |||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  21468713 caaatctccgtattttcgtaccgaatcagcttcaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 21468794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 24507049 - 24506987
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||| ||||||||||||  |||| ||||||||  ||||||||||||||    
T  24507049 cgaatcagctccaattctcttttcttttgctcaaagactcaatctttagaatatttgttcctg 24506987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 41653941 - 41653999
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||| |||||||||  |||||||||||||| |||| ||||||||  ||||||||||    
T  41653941 cgaatcagctccaaatcctctttcttttgctccaagactcaatctttagaatatttgtt 41653999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 44997936 - 44997890
Alignment:
Q  103 tctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||  |||| | |||||||||||||||||||||    
T  44997936 tctcctttcttttgctcaaagactccatctttcaaatatttgttcct 44997890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 23699113 - 23699205
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgct-cctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||| | |||||||||||||||   |||||||| |||||| || ||||||||||||| || |||| ||||||||  ||||||| ||||||    
T  23699113 tttttgcaccgaatcttcgtattttcgttccgaatcagctccaattc-cctttcttttgctcccaagactcaatctttagaatattttttcctg 23699205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 23704037 - 23703972
Alignment:
Q  77 tattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||| ||||||||| |||| ||||  |||||||||||||| |||| |||| | |||||||||    
T  23704037 tattttcatcccgaatcagctcctaatcctctttcttttgctccaagactcaatttatcaaatatt 23703972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Original strand, 23781451 - 23781488
Alignment:
Q  362 tgttgagattggagatttattttggtgatgtattatga 399  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  23781451 tgttgagactggagatttactttggtgatgtattatga 23781488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 23798719 - 23798792
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  23798719 aatcttcgtatttttgctccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 23798792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 25370682 - 25370755
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  25370682 aatcttcgtatttttgctccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 25370755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 29568851 - 29568904
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| ||||||||| |||||||  |||| | |||||||||||||||||||||    
T  29568851 ctccaattctcctttcctttgctcgaagactccatctttcaaatatttgttcct 29568904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 24825264 - 24825344
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||    |||||||  |||||| | ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  24825264 aatcttcgtattttcgtatcgaatcaggtccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcct 24825344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 2105 - 2027
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||||||||||||||| |||| ||||  |||||||||||||| |||| ||||||||||| |||| ||||    
T  2105 aatcttcgtattttcaacccgaatcagctcctaatcctctttcttttgctccaagactcaatctttcaattattcgttc 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 446
Target Start/End: Original strand, 4803 - 4900
Alignment:
Q  348 tttatcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggctaccttgaagatttttattatatgttgatgag 446  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||| |||||  ||| ||||||| |||| ||| ||| ||||||||| ||||| ||||    
T  4803 tttatcactcagtatgttgagattgaagatttattttggtgatgtactatgatttatgtggcatgactactttggaga-ttttattatgtgttgttgag 4900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 46876 - 46957
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  46876 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 46957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 606 - 550
Alignment:
Q  94 aactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  606 aactccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 10160 - 10221
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||| |||||||||||||||||| |||| |||||||| ||||||||||||||    
T  10160 cgaatcagctccaattctcctttcttttgctccaagactcaatctttaaaatatttgttcct 10221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 26713 - 26652
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||  |||||||||||||    
T  26713 cgaatcaactccaattctcctttcttttgctccaagactcaatctttagaatatttgttcct 26652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 21413 - 21360
Alignment:
Q  90 aatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttg 144  Q
    |||||||||||| |||||||||||||||||| |||| |||||||| |||||||||    
T  21413 aatcaactccaa-tctcctttcttttgctccaagactcaatcttttaaatatttg 21360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 22729 - 22789
Alignment:
Q  89 gaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| ||||||||||||||||||||||||  |||| | |||||||||||||||||||||    
T  22729 gaatcagctccaaatctcctttcttttgctcaaagactccatctttcaaatatttgttcct 22789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 102224 - 102142
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||||| ||||||||||||| |||| |||||  ||||||||| |||||||    
T  102224 caaatcttcgtattttcgtaccgaatcagctccaaatctc-tttcttttgctccaagactcaatccatcaaatattcgttcctg 102142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 77618 - 77544
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||| ||||||||| |||| ||||  |||||||||||||| |||| |||||| ||||| ||| ||||    
T  77618 ttcgtattttcatcccgaatcagctcctaatcctctttcttttgctccaagactcaatctatcaaacattcgttc 77544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 23002 - 22943
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||| || ||| |||||||||||||||||| |||| ||||||||  |||||||||||    
T  23002 cgaatcagctgcaattctcctttcttttgctccaagactcaatctttagaatatttgttc 22943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 100099 - 100048
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||| |||||||||||||||||| |||| ||||||||  |||||||||||    
T  100099 ctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 100048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 238395 - 238313
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||||||| |||| |||||  ||||||||  |||||||    
T  238395 caaatcttcgtattttcgtaccgaatcaactccaaatc-cctttcttttgctccaagactcaatccatcaaatatccgttcctg 238313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 151166 - 151247
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  151166 aatcttcgtatttttgctccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 151247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 154161 - 154240
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||||||||||||  |||||||| |||||| || ||||||||||||||  |||| |||||  || |||||| ||||||    
T  154161 aatcttcgtattttcataccgaatcagctccaagtc-cctttcttttgctctaagactcaatccatctaatattcgttcct 154240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 300427 - 300509
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| ||||||||||  |||||||| ||||||||| ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  300427 caaatctccgtattttcataccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 300509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 75 - 137
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  75 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 10704 - 10624
Alignment:
Q  350 tatcactcagtttgttgagattggagatttattttggtgatgtattatgaaatatttggcatggctaccttgaagatttttat 432  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||| | || || ||||||||| ||||| ||||||||    
T  10704 tatcactcagtatgttgagattagagatttattttggtgatgtattgtgata-atgtgacatggctactttgaa-atttttat 10624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 48528 - 48466
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  48528 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttcctg 48466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 319 - 399
Target Start/End: Complemental strand, 80377 - 80296
Alignment:
Q  319 tgttatttattttttatgactttatgagatttat-cactcagtttgttgagatt-ggagatttattttggtgatgtattatga 399  Q
    ||||||||||  ||||||||||||||| |||| | ||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  80377 tgttatttatactttatgactttatgatatttgttcactcagtt-gttgagatttggagatttattttggtgatgtaatatga 80296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 117572 - 117491
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || |||||  |||||| ||||||||||||||||| |||| |||||  ||||||||| |||||||    
T  117572 aatcttcgtattttcgtaccaaatcagttccaaaactcctttcttttgctccaagactcaatccatcaaatattcgttcctg 117491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 44608 - 44661
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  44608 ctccaattctcctttcttttgctccaagactccatctttcaaatatttgttcct 44661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 2376 - 2456
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  2376 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcct 2456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 3228 - 3169
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  |||||||||||    
T  3228 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgttc 3169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 2704 - 2786
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  2704 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 2786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 84 - 166
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  || |||||| |||||||    
T  84 caaatcttcgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatccaatattcgttcctg 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 27181 - 27098
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  27181 caaatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 27098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 6963 - 7053
Alignment:
Q  58 tttttgcatcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcc 148  Q
    |||||| |||| |||||| ||||||   | ||||| | |||||| |||||||||||||||||  |||| | ||||||||||||||||||||    
T  6963 tttttgtatcagatcttcatattttttgcacgaattagctccaattctcctttcttttgctctaagactccatctttcaaatatttgttcc 7053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 6178 - 6120
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||    
T  6178 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtt 6120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 10792 - 10734
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||    
T  10792 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtt 10734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 8787 - 8729
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||| |||||| |||||||||||||||||| |||| ||||||||  ||||||||||    
T  8787 cgaatcagctccaattctcctttcttttgctccaagactcaatctttagaatatttgtt 8729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 32558 - 32639
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    ||||||| |||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  ||||||||| ||||||    
T  32558 caaatctccgtattttcgtaccgaatcagctccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcct 32639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 61587 - 61525
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||| |||||||||||||||||| |||| |||||||   ||||||||||||||    
T  61587 cgaatcagctccaattctcctttcttttgctccaagactcaatcttcagaatatttgttcctg 61525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 36867 - 36789
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| ||||    
T  36867 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttc 36789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 1173 - 1100
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  1173 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 2649 - 2730
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||  |||||||| ||||||| | ||||||||||||||  | || |||||  ||||||||| |||||||    
T  2649 aatcttcgtattttcataccgaatcagctccaaaacccctttcttttgctctaaaactcaatccatcaaatattcgttcctg 2730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 2102 - 2175
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  2102 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 14459 - 14540
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| ||||   ||||||||| |||||||    
T  14459 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatgcatcaaatattcgttcctg 14540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 1187 - 1268
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||| | |||| |||||  ||||||||| |||||||    
T  1187 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgcttcaagactcaatccatcaaatattcgttcctg 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 21952 - 22025
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||| ||||||||   |||||||| ||||||||| ||||||||||||||| |||| |||||  |||||||||    
T  21952 aatctttgtattttcgtaccgaatcagctccaaatcccctttcttttgctccaagactcaatccatcaaatatt 22025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 17463 - 17382
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| |||||||||||| |||| |||| |||||  ||||||||| |||||||    
T  17463 aatcttcgtatttttgctccgaatcagctccaaaactcctttctttttctccaagactcaatccatcaaatattcgttcctg 17382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 27415 - 27334
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||    |||||||| ||||||| |||||||||||| |||| |||| |||||  ||||||||| |||||||    
T  27415 aatcttcgtatttttgctccgaatcagctccaaaactcctttctttttctccaagactcaatccatcaaatattcgttcctg 27334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 98 - 179
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  || |||||| |||||||    
T  98 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatccaatattcgttcctg 179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 4320 - 4247
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  4320 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 4247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 34900 - 34981
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  || |||||| |||||||    
T  34900 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatccaatattcgttcctg 34981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 37541 - 37614
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  37541 aatcttcgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 37614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 19891 - 19944
Alignment:
Q  96 ctccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcct 149  Q
    |||||| ||||||||||||| |||| |||| | |||||||||||||||||||||    
T  19891 ctccaattctcctttctttttctccaagactccatctttcaaatatttgttcct 19944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 34235 - 34312
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgtt 146  Q
    ||||||||||||||  | |||||| | ||||||| | ||||||||||||||| |||| |||||  |||||||||||||    
T  34235 aatcttcgtattttagaaccgaataagctccaaaacccctttcttttgctccaagactcaatccatcaaatatttgtt 34312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 191470 - 191547
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||||||| |||| ||||  |||||| || |||| |||| |||||  ||||||||| |||||||    
T  191470 ttcgtattttcaacccgaatcagctcctaatcctctttctcttactccaagactcaatccatcaaatattcgttcctg 191547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 6460 - 6376
Alignment:
Q  66 tcaaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||||||   || ||||| ||||||| | ||||||||||||| | |||| |||||  ||||||||| |||||||    
T  6460 tcaaatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgcttcaagactcaatccatcaaatattcgttcctg 6376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 448
Target Start/End: Original strand, 41559 - 41705
Alignment:
Q  298 ctgattaggatgtctgtctgttgttatttattttttatgactttatgagatttatcactcagtttgttgagattggagatttat-tttggtgatgtatta 396  Q
    ||||||||| |||| |||| || | |||||||||| |||  || |||||||| |||||||||| |||| |  || ||||||||| |||||||||||||||    
T  41559 ctgattagg-tgtcagtcttttttcatttatttttcatgttttgatgagatt-atcactcagtatgttaaagtttgagatttatatttggtgatgtatta 41656  T
Q  397 tgaaatatttggcatggctaccttgaagatttttattatatgttgatgagat 448  Q
    ||  |||  || ||||||||| ||| ||| ||||||||| ||||||||||||    
T  41657 tg--atacatgacatggctactttggaga-ttttattatttgttgatgagat 41705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 12626 - 12544
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   || |||||  |||||||| ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  12626 caaatcttcgtattttcgtaccaaatcagatccaaatc-cctttcttttgctccaagactcaatccatcaaatattcgttcctg 12544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 27144 - 27226
Alignment:
Q  67 caaatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||   |||||||| ||||||||  ||||||||||||||| |||| |||||  || |||||| |||||||    
T  27144 caaatcttcgtattttcgtaccgaatcagctccaaat-acctttcttttgctccaagactcaatccatctaatattcgttcctg 27226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 28847 - 28800
Alignment:
Q  103 tctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  28847 tctcctttcttttgctccaagactcaatctttagaatatttgttcctg 28800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 2001 - 2075
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||| ||||||||| || | ||||  |||||||||||||| |||| |||||| ||||| ||| ||||    
T  2001 ttcgtattttcatcccgaatcagcttctaatcctctttcttttgctccaagactcaatctatcaaacattcgttc 2075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 9442 - 9504
Alignment:
Q  88 cgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||| ||||||||||||| || | |||| ||||||||  ||||||| ||||||    
T  9442 cgaatcaactccaattctcctttctttttctgcaagactcaatctttagaatatttattcctg 9504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 72369 - 72431
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatc 131  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||    
T  72369 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatc 72431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 84559 - 84621
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatc 131  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||    
T  84559 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctccaagactcaatc 84621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 64538 - 64572
Alignment:
Q  361 ttgttgagattggagatttattttggtgatgtatt 395  Q
    |||||||||||||||||||||||||||| ||||||    
T  64538 ttgttgagattggagatttattttggtgttgtatt 64572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1354 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1354
Description:

Target: scaffold1354; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 681 - 754
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||||||||||||   |||||||| ||||||| | ||||||||||||||  |||| |||||  |||||||||    
T  681 aatcttcgtattttcgcaccgaatcagctccaaaacccctttcttttgctcgaagactcaatccatcaaatatt 754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 2234 - 2315
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||| ||||||||| |||| |||||  ||||||||| |||||||    
T  2234 aatcttcgtattttcgtaccaaatcagctccaaaacccctttattttgctccaagactcaatccatcaaatattcgttcctg 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0773 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0773
Description:

Target: scaffold0773; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 886 - 809
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||| ||||||||| || | ||||  ||||||||| |||| |||| |||||| ||||| ||| |||||||    
T  886 ttcgtattttcatcccgaatcagcttctaatcctctttcttttactccaagactcaatctatcaaacattcgttcctg 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 4789 - 4708
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| | || |||||  ||||||||| |||||||    
T  4789 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaatactcaatccatcaaatattcgttcctg 4708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 21089 - 21013
Alignment:
Q  73 ttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||  | |||||| ||||||| | | ||||||||||||| |||| ||||||||  ||||||||||||||    
T  21089 ttcgtattttcattctgaatcagctccaaacc-cttttcttttgctccaagactcaatctttagaatatttgttcctg 21013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 31435 - 31371
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatcttt 134  Q
    ||||||||||||||||| || ||||| || ||||| | |||||||||||||| |||| ||||||||    
T  31435 aatcttcgtattttcaagccaaatcagcttcaaat-tgctttcttttgctccaagactcaatcttt 31371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 22943 - 22862
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   |||||||| ||||||| | | ||| ||||||||| |||| |||||  ||||||||| |||||||    
T  22943 aatcttcgtattttcgtaccgaatcagctccaaaacccattttttttgctccaagactcaatccatcaaatattcgttcctg 22862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 61739 - 61658
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||| |||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  61739 aatcttcatattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 61658  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 73435 - 73354
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||    ||||||| ||||||| | ||||||||||||||| | || |||||  ||||||||| |||||||    
T  73435 aatcttcgtattttcgtagcgaatcagctccaaaacccctttcttttgctccaaaactcaatccatcaaatattcgttcctg 73354  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 22055 - 22128
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatt 142  Q
    |||||| ||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  |||||||||    
T  22055 aatctttgtattttcgtaccgaatcagctccaaaacccctttcttttgctccaagactcaatccatcaaatatt 22128  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 101777 - 101696
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || |||||  |||||| | ||||||||||||||| |||| |||||  ||||||||| |||||||    
T  101777 aatcttcgtattttcgtaccaaatcagttccaaaacccctttcttttgctccaagactcaatccatcaaatattcgttcctg 101696  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 356351 - 356432
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    |||||||||||||||   || ||||| ||||||| | ||||||||||||||| |||| |||||  || |||||| |||||||    
T  356351 aatcttcgtattttcgtaccaaatcagctccaaaacccctttcttttgctccaagactcaatccatccaatattagttcctg 356432  T

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Target: scaffold0855 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 3111 - 3067
Alignment:
Q  106 cctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||| |||| |||||||||| |||||| ||||||    
T  3111 cctttcttttgctccaagactcaatctttcatatatttcttcctg 3067  T

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Target: scaffold0847 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 3276 - 3232
Alignment:
Q  106 cctttcttttgctcctagacgcaatctttcaaatatttgttcctg 150  Q
    ||||||||||||||| |||| |||||||||| |||||| ||||||    
T  3276 cctttcttttgctccaagactcaatctttcatatatttcttcctg 3232  T

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Target: scaffold0535 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 669 - 741
Alignment:
Q  69 aatcttcgtattttcaacccgaatcaactccaaatctcctttcttttgctcctagacgcaatctttcaaatat 141  Q
    |||||| ||||||||   |||||||| ||||||| | ||||||||||||||| |||| |||||  ||||||||    
T  669 aatcttagtattttcgcaccgaatcatctccaaaacccctttcttttgctccaagactcaatccatcaaatat 741  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 20882 - 20838
Alignment:
Q  103 tctcctttcttttgctcctagacgcaatctttcaaatatttgttc 147  Q
    |||||||||||||||||| |||| ||||||||  |||||||||||    
T  20882 tctcctttcttttgctccaagactcaatctttagaatatttgttc 20838  T

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