View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3119A-Insertion-17 (Length: 825)
Name: NF3119A-Insertion-17
Description: NF3119A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3119A-Insertion-17 |
 | |
|
| [»] scaffold0257 (1 HSPs) |
| | |
|
| [»] scaffold0922 (1 HSPs) |
| | |
|
| [»] scaffold1147 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 535; Significance: 0; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 8 - 663
Target Start/End: Original strand, 8021275 - 8021928
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021275 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctctgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
8021374 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttc---atgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaa |
204 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021375 |
cattgagtagccgatacaagggttggttatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaa |
8021474 |
T |
|
| Q |
205 |
gccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttc |
304 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
8021475 |
gcctctctgaatttatcgagttattacaagatgtacacagttttccttttgataaggaatggttggatgatatcgaaaagcgtgctttgtttcatggttc |
8021574 |
T |
|
| Q |
305 |
gcaagtctctcaagatgcattgcaaaaattgttggactcaaaacacat-ttgacacaacgtgt-gaagtatcttaagcatcaattggcttcctctgaagc |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021575 |
gcaagtctctcaagatgcattgcaaaaattgttggactcaaaacacatcttgacacaacgtgtggaagtatcttaagcatcaattggcttcctctgaagc |
8021674 |
T |
|
| Q |
403 |
tgatttgcagagcatcactcaacaggaggtacaaattttacgaacacgggatgaaaggcctttaagtgatcctcttggttattagactannnnnnnncgt |
502 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |
|
|
| T |
8021675 |
tgatttgcagagcatcactcaacaggaggcacaaattttacgaacacgggatg------ctttaagtgatcctcttagttattagacta-tttttttcgt |
8021767 |
T |
|
| Q |
503 |
tgcattcaagttgttccctgcttttctttatccttcaatattttatttattgctcggacatacgttcctcattaataaattcatttagctgttcaaaaca |
602 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021768 |
tgcattcaatttgttccctgcttttctttatccttcaatattttatttattgctcggacatacgttcctcattaataaattcatttagctgttcaaaaca |
8021867 |
T |
|
| Q |
603 |
attgacaagttatagatacaaagttttagcggtaattaatctaattaagagaacctatgaa |
663 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
8021868 |
attgacaagttataaatacaaagttttagcgataattaatctaagtaagagaacctatgaa |
8021928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 669 - 825
Target Start/End: Original strand, 8021974 - 8022129
Alignment:
| Q |
669 |
gaaggtggcagagttcaaacctattaccacatgcttaaaagatttacacccccttaccacttttgacaaaatattgttggtaacttaacctaaattttaa |
768 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
8021974 |
gaaggtggcagagttcaaacctattaccacatgcttaaaagatttacacccc-ttaccacttt-gacaaaatattgttggtaacttaacctaaattttaa |
8022071 |
T |
|
| Q |
769 |
cctatatacaatcataaaaatatagaaataacacattctc-acctctatatatatctt |
825 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8022072 |
cctatatacaatcataaaaatatagaaataacacattctcaacctctatatatatctt |
8022129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 44 - 340
Target Start/End: Original strand, 22965811 - 22966106
Alignment:
| Q |
44 |
gagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaac |
143 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||| |||| ||| ||||| ||||| |||||||| |||||| |||||||| ||| |||| |||| |
|
|
| T |
22965811 |
gagaacttgtctttgttgactgatttctttgttaagtatccatcagttcttttaagggacacttcactgagtactagatacaagtgtt-atgcatacact |
22965909 |
T |
|
| Q |
144 |
tgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgca |
243 |
Q |
| |
|
|||||||| |||||||| ||||||| ||||| ||||||||| | |||||||||| |||||| || |||||||| | || || |||| || | |||| |
|
|
| T |
22965910 |
tgtctagctgagctattacaattcctccaaacccatagtgtgctagatgtgttagcttcaagtcattctgaattcgttaagctactacacaatttgcgca |
22966009 |
T |
|
| Q |
244 |
gttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttgga |
340 |
Q |
| |
|
| ||| |||||||||||| ||||||||| | | |||| | |||||||||| | | |||||||||||||||||||||||||| ||||||| |
|
|
| T |
22966010 |
gctttggttttgataaggattggttggatagtgttgaaagacgtgctttgttttcggatataaaagtctctcaagatgcattgcaaaaactgttgga |
22966106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 44 - 340
Target Start/End: Original strand, 22792345 - 22792633
Alignment:
| Q |
44 |
gagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaac |
143 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||| |||| ||| ||||| ||||| |||||||| |||||| ||||| || ||| |||| | | |
|
|
| T |
22792345 |
gagaacttgtctttgttgactgatttctttgttaagtatccatcagttcttttaagggacacttcactgagtactagatac-agtgtt-atgcat---ag |
22792439 |
T |
|
| Q |
144 |
tgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgca |
243 |
Q |
| |
|
||| || |||||||| ||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||| || || || |||| || | || | |
|
|
| T |
22792440 |
tgt---gctgagctattacaattcctccaaacccatagtgtgctggatgtgttaggttcaagtcactctgaattcattaagctactacacaatttgcgta |
22792536 |
T |
|
| Q |
244 |
gttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttgga |
340 |
Q |
| |
|
| ||| |||||||||||| ||||||||| | | |||| | |||||||||| | | |||||||||||||||||||||||||| ||||||| |
|
|
| T |
22792537 |
gctttggttttgataaggattggttggatagtgttgaaagacgtgctttgttttcggatataaaagtctctcaagatgcattgcaaaaactgttgga |
22792633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 96 - 340
Target Start/End: Original strand, 22400686 - 22400929
Alignment:
| Q |
96 |
taaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgt |
195 |
Q |
| |
|
||||| |||||||| |||||| |||||||| ||| |||| |||| |||||||| || ||||| ||||||| ||||| ||||||||| | ||||||| |
|
|
| T |
22400686 |
taagggacacttcactgagtactagatacaagtgtt-atgcatacacttgtctagctgatctattacaattcctccaaacccatagtgtgctagatgtgt |
22400784 |
T |
|
| Q |
196 |
taggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtt |
295 |
Q |
| |
|
|||||||||| ||||||||||| | || || |||| || | ||||| ||| |||||||||||| ||||||||| | | |||| | ||||||||| |
|
|
| T |
22400785 |
taggttcaagtcactctgaattcgttaagctactacacaatttgcgcagctttggttttgataaggattggttggatagtgttgaaagacgtgctttgtt |
22400884 |
T |
|
| Q |
296 |
tcatggttcgcaagtctctcaagatgcattgcaaaaattgttgga |
340 |
Q |
| |
|
| | | |||||||||||||||||||||||||| ||||||| |
|
|
| T |
22400885 |
ttcggatataaaagtctctcaagatgcattgcaaaaactgttgga |
22400929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0257 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold0257
Description:
Target: scaffold0257; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 51 - 565
Target Start/End: Original strand, 19586 - 20094
Alignment:
| Q |
51 |
tgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctag |
150 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| ||| | | | | ||||||||||||||| | |||||||||||| |||||||||| || |||| |
|
|
| T |
19586 |
tgtctttgttgactgatttctttgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcctag |
19684 |
T |
|
| Q |
151 |
ccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcc |
250 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||| |||| | | |
|
|
| T |
19685 |
ctgagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttactacaagatgtgcgcaaatgtgg |
19784 |
T |
|
| Q |
251 |
ttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttggactcaaaacac |
350 |
Q |
| |
|
|||||||||| |||||||||||||| | ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19785 |
ttttgataagaaatggttggatgatgtggaaaagcgcgctttgtttcctggttcacaagtctctcaagatgcattgcaaaaattgttggactcaaaacac |
19884 |
T |
|
| Q |
351 |
at-ttgacacaacgtgtgaagtatcttaagcatcaattggcttcctctgaagctgatttgcagagcatcactcaacaggaggtacaaattttacgaacac |
449 |
Q |
| |
|
|| ||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| ||| | |
|
|
| T |
19885 |
atcttgacgcaacatgtgaaggatcttaagcatcaattggcttcctctgaagctgttttgcagagcatcactcaacaagaggcacaaattttacaaactc |
19984 |
T |
|
| Q |
450 |
gggatgaaaggcctttaagtgatcctcttggttattagactannnnnnnncgttgcattcaagttgttccctgcttttctttatccttcaatattttatt |
549 |
Q |
| |
|
||| || |||||||||||||| |||||||||| |||| |||||||||| || |||||||| |||||||||||||| ||||||||||| |
|
|
| T |
19985 |
ggggtg------ctttaagtgatcctattggttattaaactattttttttcgttgcattctagcagttccctgattttctttatccttgaatattttatt |
20078 |
T |
|
| Q |
550 |
tattgctcggacatac |
565 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
20079 |
tattgctcgaacatac |
20094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 253; Significance: 1e-140; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 17 - 491
Target Start/End: Complemental strand, 17744186 - 17743718
Alignment:
| Q |
17 |
ctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagta |
116 |
Q |
| |
|
||||| |||||||| ||||| | | |||||| |||||||| |||||||||||| ||||||||||||||||| ||||| ||| | ||||||||||||||| |
|
|
| T |
17744186 |
ctagtctccaagaagcatttcgattatgagaacttgtcttttttgactgatttctttgttaagcatccttcaattcttttaaaggacacttcattgagta |
17744087 |
T |
|
| Q |
117 |
gccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaat |
216 |
Q |
| |
|
| |||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17744086 |
acagatacaagggtt-atgcctacaattgcctagctgagctattgaaattccttcaaactcgtagtgtgttggatgtgttaggttcaagcaactctgaat |
17743988 |
T |
|
| Q |
217 |
ttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctca |
316 |
Q |
| |
|
|| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| | | ||||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
17743987 |
ttgtcgagttattacaagatgtgcgcagatttccttttgataagaaatggttggatggtgttgaaaagcgcgctttgtttcctggtttacaagtctctca |
17743888 |
T |
|
| Q |
317 |
agatgcattgcaaaaattgttggactcaaaacaca-tttgacacaacgtgtgaagtatcttaagcatcaattggcttcctctgaagctgatttgcagagc |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||| ||||| | |||||||||||||||||| |||||||||||||| |||||||| | |
|
|
| T |
17743887 |
agatgcattgcaaaaattgttggactcaaaacatattttgacacaacatgtgatggatcttaagcatcaattggattcctctgaagctgttttgcagaac |
17743788 |
T |
|
| Q |
416 |
atcactcaacaggaggtacaaattttacgaacacgggatgaaaggcctttaagtgatcctcttggttattagacta |
491 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| || | || |||||||||||||| |||| |||||||||| |
|
|
| T |
17743787 |
atcactcaacaggaggcacaaattttacaaactcgagctg------ctttaagtgatcctattggctattagacta |
17743718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 17 - 491
Target Start/End: Complemental strand, 19045506 - 19045038
Alignment:
| Q |
17 |
ctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagta |
116 |
Q |
| |
|
||||| |||||||| ||||| | | |||||| |||||||| |||||||||||| ||||||||||||||||| ||||| ||| | ||||||||||||||| |
|
|
| T |
19045506 |
ctagtctccaagaagcatttcgattatgagaacttgtcttttttgactgatttctttgttaagcatccttcaattcttttaaaggacacttcattgagta |
19045407 |
T |
|
| Q |
117 |
gccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaat |
216 |
Q |
| |
|
| |||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19045406 |
acagatacaagggtt-atgcctacaattgcctagctgagctattgaaattccttcaaactcgtagtgtgttggatgtgttaggttcaagcaactctgaat |
19045308 |
T |
|
| Q |
217 |
ttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctca |
316 |
Q |
| |
|
|| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| | | ||||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
19045307 |
ttgtcgagttattacaagatgtgcgcagatttccttttgataagaaatggttggatggtgttgaaaagcgcgctttgtttcctggtttacaagtctctca |
19045208 |
T |
|
| Q |
317 |
agatgcattgcaaaaattgttggactcaaaacaca-tttgacacaacgtgtgaagtatcttaagcatcaattggcttcctctgaagctgatttgcagagc |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||| ||||| | |||||||||||||||||| |||||||||||||| |||||||| | |
|
|
| T |
19045207 |
agatgcattgcaaaaattgttggactcaaaacatattttgacacaacatgtgatggatcttaagcatcaattggattcctctgaagctgttttgcagaac |
19045108 |
T |
|
| Q |
416 |
atcactcaacaggaggtacaaattttacgaacacgggatgaaaggcctttaagtgatcctcttggttattagacta |
491 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| || | || |||||||||||||| |||| |||||||||| |
|
|
| T |
19045107 |
atcactcaacaggaggcacaaattttacaaactcgagctg------ctttaagtgatcctattggctattagacta |
19045038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 50 - 491
Target Start/End: Original strand, 28187144 - 28187579
Alignment:
| Q |
50 |
ttgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtcta |
149 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||||| ||||||||||||| ||| |
|
|
| T |
28187144 |
ttgtctttgttgactgatttctttgttaagcatccttcggttcttttaaacgacacttcattgagtaacagatacaagggtt-atgcctacaactgccta |
28187242 |
T |
|
| Q |
150 |
gccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttc |
249 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| ||| |
|
|
| T |
28187243 |
gctgagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatttg |
28187342 |
T |
|
| Q |
250 |
cttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttggactcaaaaca |
349 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28187343 |
gttttgataaggaatggttggatgatattgaaaaacgcgctttgttgcctggtttacaagtctctcaagatgcattgcaaaaattgttggactcaaaaca |
28187442 |
T |
|
| Q |
350 |
ca-tttgacacaacgtgtgaagtatcttaagcatcaattggcttcctctgaagctgatttgcagagcatcactcaacaggaggtacaaattttacgaaca |
448 |
Q |
| |
|
|| ||||||||||| |||| || |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || |
|
|
| T |
28187443 |
cattttgacacaacatgtggaggatcttaagcatcaattggcttcctgtgaagctgttttgcagaacatcactcaacaggaggcacaaattttacatact |
28187542 |
T |
|
| Q |
449 |
cgggatgaaaggcctttaagtgatcctcttggttattagacta |
491 |
Q |
| |
|
|||| || |||||||||||||| |||| |||||||||| |
|
|
| T |
28187543 |
cgggctg------ctttaagtgatcctattggctattagacta |
28187579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 8 - 452
Target Start/End: Original strand, 28163092 - 28163536
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
|||||| | ||||| |||||||| ||||| | | ||| || ||||||||||||||||||||| ||||||||||||||| ||||| ||| |||||| |
|
|
| T |
28163092 |
cttgagcaactagtctccaagaagcatttcgattatgataacttgtctttgttgactgatttctttgttaagcatcctttggttcttttaaacgacactt |
28163191 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
||||||||| | |||||||||||| || ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28163192 |
cattgagtaacagatacaagggtt-atacctacaattgtctagcggagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagcc |
28163290 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgca |
307 |
Q |
| |
|
||||||||||| | |||||| ||||||||| |||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||| | ||||| || |
|
|
| T |
28163291 |
actctgaatttgttgagttactacaagatgcacgcagatttccatttcataaggaatggttggatgatatcgaaaagcgcgctttgttgcctggtttaca |
28163390 |
T |
|
| Q |
308 |
agtctctcaagatgcattgcaaaaattgttggactcaaaacaca-tttgacacaacgtgtgaagtatcttaagcatcaattggcttcctctgaagctgat |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| | ||||||||||||||||||||||||||||||||| | |
|
|
| T |
28163391 |
agtctctcaagatgcattgcaaaaattgttggactcaaaacacattttgactcaacatgtggcggatcttaagcatcaattggcttcctctgaagctgtt |
28163490 |
T |
|
| Q |
407 |
ttgcagagcatcactcaacaggaggtacaaattttacgaacacggg |
452 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
28163491 |
ttgcagaacatcactcaacaggaggcacaaattttacaaactcggg |
28163536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 8 - 442
Target Start/End: Original strand, 11421667 - 11422101
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||| |
|
|
| T |
11421667 |
cttgagaatctagtttccaagaaccatttggctattgagaacttgtctttgttgactgaattccttgttaagcatccgtctgttcttctaagggacactt |
11421766 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||| || ||||| ||||||||||||||||| || || ||||||||||| || |||||||||||||| |
|
|
| T |
11421767 |
cattgagtagcagatacaagggtt-atgcctacaattgcctagctgagctattgaaattcctccagacccatagtgtgttagacgtgttaggttcaagaa |
11421865 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgca |
307 |
Q |
| |
|
||||| |||| | |||||| |||||||||| || || ||||||||||| || ||||||||||||| | | ||||||| |||||||||| ||||| || |
|
|
| T |
11421866 |
actctacatttgttgagttaatacaagatgtgcgtagatttccttttgacaaagaatggttggatggtgttgaaaagcgcgctttgtttcctggtttaca |
11421965 |
T |
|
| Q |
308 |
agtctctcaagatgcattgcaaaaattgttggactcaaaacaca-tttgacacaacgtgtgaagtatcttaagcatcaattggcttcctctgaagctgat |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||| |||||| |||| ||| || ||||||||||||||||||||||||| ||||||| | |
|
|
| T |
11421966 |
agtctctcaagatgcattgcaaaaattgttgaactcaaaatacattttgactcaacacgtggaggatcttaagcatcaattggcttcctccgaagctgtt |
11422065 |
T |
|
| Q |
407 |
ttgcagagcatcactcaacaggaggtacaaatttta |
442 |
Q |
| |
|
|| |||||||||||||| ||||||| |||| ||||| |
|
|
| T |
11422066 |
ttacagagcatcactcagcaggaggcacaattttta |
11422101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 8 - 332
Target Start/End: Original strand, 28152095 - 28152418
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
28152095 |
cttgagaatctagtctccaataatcatttggctattgagaaattgtctttgttgactgacttccttgttaagcatccttcagttcttctaagggacactt |
28152194 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28152195 |
cattgagtagcagatacaagggtt-atgcctacaacagcctagcagagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagca |
28152293 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgca |
307 |
Q |
| |
|
||||||||||| | ||||||||||||||||| || || ||||| ||||||||||| |||||||||||| | |||| || |||||||||| || || || |
|
|
| T |
28152294 |
actctgaatttgttgagttattacaagatgtgcgtagatttccgtttgataaggagtggttggatgatgttgaaatgcgcgctttgtttcctgatttaca |
28152393 |
T |
|
| Q |
308 |
agtctctcaagatgcattgcaaaaa |
332 |
Q |
| |
|
| |||||||| |||||||||||||| |
|
|
| T |
28152394 |
attctctcaaaatgcattgcaaaaa |
28152418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 51 - 388
Target Start/End: Original strand, 28057671 - 28058008
Alignment:
| Q |
51 |
tgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctag |
150 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| ||| | | | | ||||||||||||||| | |||||||||||| |||||||||| || |||| |
|
|
| T |
28057671 |
tgtctttgttgactgatttctttgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcctag |
28057769 |
T |
|
| Q |
151 |
ccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcc |
250 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| ||| |
|
|
| T |
28057770 |
ctgagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatttgg |
28057869 |
T |
|
| Q |
251 |
ttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttggactcaaaacac |
350 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | | |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28057870 |
ttttgataaggaatggttggatgatattgaaaaacgcgttttgttgcctggtttacaagtctctcaagatgcattgcaaaaattgttggactcaaaacac |
28057969 |
T |
|
| Q |
351 |
a-tttgacacaacgtgtgaagtatcttaagcatcaattg |
388 |
Q |
| |
|
| |||||| |||| |||| || ||||||||||||||||| |
|
|
| T |
28057970 |
attttgactcaacatgtggaggatcttaagcatcaattg |
28058008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 51 - 388
Target Start/End: Original strand, 28068096 - 28068433
Alignment:
| Q |
51 |
tgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctag |
150 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||| ||| | | | | ||||||||||||||| | |||||||||||| |||||||||| || |||| |
|
|
| T |
28068096 |
tgtctttgttgactgatttctttgttaaacatccttctgttcgtttgaaggacacttcattgagtaacagatacaagggtt-atgcctacaattgcctag |
28068194 |
T |
|
| Q |
151 |
ccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcc |
250 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||| ||| |
|
|
| T |
28068195 |
ctgagctattgaaattcctccaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttgttgagttattacaagatgtgcgcaaatttgg |
28068294 |
T |
|
| Q |
251 |
ttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttggactcaaaacac |
350 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | | |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28068295 |
ttttgataaggaatggttggatgatattgaaaaacgcgttttgttgcctggtttacaagtctctcaagatgcattgcaaaaattgttggactcaaaacac |
28068394 |
T |
|
| Q |
351 |
a-tttgacacaacgtgtgaagtatcttaagcatcaattg |
388 |
Q |
| |
|
| |||||| |||| |||| || ||||||||||||||||| |
|
|
| T |
28068395 |
attttgactcaacatgtggaggatcttaagcatcaattg |
28068433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 160; E-Value: 8e-85
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 27920650 - 27920972
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
27920650 |
cttgagaatctagtctccaagaagcatttggctattgagaacttgtctttgttgactgacttccttgttaagcatccttcagttcttctaagggacactt |
27920749 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
|| |||||||| |||||||||||| || |||||||||| ||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27920750 |
cactgagtagcagatacaagggtt-attcctacaactgcctagctgagctattgcgattcctccaaactcatagtgcgttggatgtgttaggttcaagcc |
27920848 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgca |
307 |
Q |
| |
|
||||||||||| | || |||||||||||||| ||||| | | ||||||||| || |||||||||| | | ||||||| ||||||| ||||| | || |
|
|
| T |
27920849 |
actctgaatttgttgatttattacaagatgtgcgcagatgtggttttgataaagattggttggatggtgttgaaaagcgcgctttgtctcatgaattaca |
27920948 |
T |
|
| Q |
308 |
agtctctcaagatgcattgcaaaa |
331 |
Q |
| |
|
| ||||| || ||||||||||||| |
|
|
| T |
27920949 |
attctctgaaaatgcattgcaaaa |
27920972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 27430664 - 27430403
Alignment:
| Q |
11 |
gagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcat |
110 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| | ||| | || |||||| |
|
|
| T |
27430664 |
gagaatctagtctccaagaatcatttggctatcgagaacttgtctttgttgactgatttccttgttaagcatccttctgttcatttaaaggacccttcat |
27430565 |
T |
|
| Q |
111 |
tgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccact |
210 |
Q |
| |
|
|||||| | |||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||| | |||| ||||||||||||| ||||||||||||||| |
|
|
| T |
27430564 |
tgagtaacagatacaagggtt-atgcctacaactgcctagctgagctattgaaattcctccaaccacataatgtgttggatgtggtaggttcaagccact |
27430466 |
T |
|
| Q |
211 |
ctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatg |
273 |
Q |
| |
|
|||||||| | ||||||||||||||||| || || |||||||||||||||||||||||||||| |
|
|
| T |
27430465 |
ctgaatttgttgagttattacaagatgtgcgtagatttccttttgataaggaatggttggatg |
27430403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 23 - 339
Target Start/End: Original strand, 27954634 - 27954949
Alignment:
| Q |
23 |
tccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgat |
122 |
Q |
| |
|
||||| || ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||| ||| |
|
|
| T |
27954634 |
tccaataagcatttggctattgagaacttgtctttgttgactgatttcctagttaagcatccttcatttcttacaagggacacttcatggagtagcagat |
27954733 |
T |
|
| Q |
123 |
acaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcg |
222 |
Q |
| |
|
||||||||| || |||||||||| ||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | | |
|
|
| T |
27954734 |
acaagggtt-attcctacaactgcctagctgagctattgcgattcctccaaactcatagtgcgttggatgtgttaggttcaagccactctgaatttgttg |
27954832 |
T |
|
| Q |
223 |
agttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgc |
322 |
Q |
| |
|
| |||||||||||||| ||||| | | ||||||||| || |||||||||| | | ||||||| ||||||| | ||| | ||| |||||||| |||| |
|
|
| T |
27954833 |
atttattacaagatgtgcgcagatgtggttttgataaagattggttggatggtgttgaaaagcacgctttgtcttatgaattacaattctctcaaaatgc |
27954932 |
T |
|
| Q |
323 |
attgcaaaaattgttgg |
339 |
Q |
| |
|
|||||||||| |||||| |
|
|
| T |
27954933 |
attgcaaaaactgttgg |
27954949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 8 - 331
Target Start/End: Complemental strand, 8538800 - 8538478
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
||||| |||||||| |||||||||||||| |||||||| || |||| |||||||| ||||||||||||| ||||||||| ||||| ||| | || ||| |
|
|
| T |
8538800 |
cttgaaaatctagtctccaagaatcatttggctattgataacatgtccttgttgaccaatttccttgttaaccatccttcaattcttttaacggacgctt |
8538701 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
|| | |||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
8538700 |
cactaagtaacagatacaagggtt-atgcctacaactgtctagctgagctattgaaattcctccaaactcatattgtgttggatgtgttaggttcaagcc |
8538602 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgca |
307 |
Q |
| |
|
| ||||||||| | ||||||||||||||||| || | | | |||||||||||| ||||||||| | | ||||||| |||||||||| || || || |
|
|
| T |
8538601 |
aatctgaatttgttgagttattacaagatgtgcgaaaatgtggttttgataaggattggttggatcgtgttgaaaagcgcgctttgtttcctgatttaca |
8538502 |
T |
|
| Q |
308 |
agtctctcaagatgcattgcaaaa |
331 |
Q |
| |
|
| |||||||| ||||||||||||| |
|
|
| T |
8538501 |
attctctcaaaatgcattgcaaaa |
8538478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 7 - 331
Target Start/End: Original strand, 28037954 - 28038277
Alignment:
| Q |
7 |
acttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacact |
106 |
Q |
| |
|
||||||||||||||| || ||||| ||||| |||||||| || ||||||||||||||||||||| |||||||||||||||| || | ||| | ||||| |
|
|
| T |
28037954 |
acttgagaatctagtctctaagaagcatttggctattgataatttgtctttgttgactgatttctttgttaagcatccttctggtcgtttaaaggacact |
28038053 |
T |
|
| Q |
107 |
tcattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagc |
206 |
Q |
| |
|
| |||||||| |||||||| ||| |||| |||||||| |||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
28038054 |
taattgagtaaaagatacaagagtt-atgcttacaactgcctagtcgatctattgaaattcctccaaacgcatagtgtgttggatgtgttaggttcaagc |
28038152 |
T |
|
| Q |
207 |
cactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgc |
306 |
Q |
| |
|
||| |||||||| | ||||| ||||||||||| ||||| | | ||| ||||| || ||||| |||| | ||||||||| ||||||||||| || || |
|
|
| T |
28038153 |
cacactgaatttgttgagttgttacaagatgtgcgcagatgtagtttcgataaagattggtttgatggtgtcgaaaagcgtgctttgtttcctgatttaa |
28038252 |
T |
|
| Q |
307 |
aagtctctcaagatgcattgcaaaa |
331 |
Q |
| |
|
|| |||||||| ||||||||||||| |
|
|
| T |
28038253 |
aattctctcaaaatgcattgcaaaa |
28038277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 30993781 - 30994007
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||| || |||| |||||||| |||||||||||||| ||||||||| ||||||||||| ||| || |
|
|
| T |
30993781 |
cttgagaatctagtctccaagaagtatttagctattgataacttgtacttgttgacggatttccttgttaatcatccttcaattcttctaaggaacagtt |
30993880 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
|| ||||| | |||| ||||||| ||||||||||||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
30993881 |
caccgagtaacagatataagggtt-atgcctacaactgtctagctgatctattgaaattcctccaaacgcattgtgtgttggatgtgttaggttcaagcc |
30993979 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaaga |
235 |
Q |
| |
|
||||||||||| | ||||||||| |||| |
|
|
| T |
30993980 |
actctgaatttgttgagttattagaaga |
30994007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 43 - 236
Target Start/End: Complemental strand, 18078881 - 18078689
Alignment:
| Q |
43 |
tgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaa |
142 |
Q |
| |
|
|||||| || |||||||||||||||||| |||||||| |||||||| |||| ||| | ||||||||||||||| | |||||||||||| |||||||||| |
|
|
| T |
18078881 |
tgagaacttttctttgttgactgatttctttgttaagaatccttcagttctcttaaaggacacttcattgagtaacagatacaagggtt-atgcctacaa |
18078783 |
T |
|
| Q |
143 |
ctgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagat |
236 |
Q |
| |
|
|| ||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
18078782 |
ttgcctagctgagctattgaaattcctccaaacgcataatgtgttggatgtgttaggttcaagccattctgaatttgttgagttattacaagat |
18078689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 43 - 296
Target Start/End: Original strand, 27777019 - 27777271
Alignment:
| Q |
43 |
tgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaa |
142 |
Q |
| |
|
|||||| |||||||||||||||||||| |||| ||| ||||||| ||||| | ||| |||||||| |||||| |||||||| ||| || ||||||| |
|
|
| T |
27777019 |
tgagaacttgtctttgttgactgattttcttgataacaatccttctgttcttttgagggacacttcactgagtaatagatacaagagtt-attcctacaa |
27777117 |
T |
|
| Q |
143 |
ctgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgc |
242 |
Q |
| |
|
|||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |
|
|
| T |
27777118 |
ctgtcttgctgagctattgaaattcctccaaaaccatagtgtgttggatgtgttaggttcaagccgctctgagtttgatgagttattacaagatgtacgc |
27777217 |
T |
|
| Q |
243 |
agttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgttt |
296 |
Q |
| |
|
|| | | ||||||||| || |||||||||| | | ||||| | |||||||||| |
|
|
| T |
27777218 |
agatgtggttttgataaagattggttggatggtgttgaaaaacgtgctttgttt |
27777271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 43 - 272
Target Start/End: Complemental strand, 27458477 - 27458249
Alignment:
| Q |
43 |
tgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaa |
142 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||| ||||| ||| | |||| ||| |||||| |||||||||||| |||| ||| |
|
|
| T |
27458477 |
tgagaacttgtctttgttgactgatttccttgttaagcacccttcacttcttttaaaggacacatcactgagtaatagatacaagggtt-atgcttacgg |
27458379 |
T |
|
| Q |
143 |
ctgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgc |
242 |
Q |
| |
|
|||||| || ||||| || |||| |||||||| ||||||||||| |||||||| |||||||||| |||| ||||| | |||||||||||||||||||| |
|
|
| T |
27458378 |
ctgtctcgctgagctgttacaatttcttcaaacccatagtgtgtttgatgtgttgggttcaagccgctctaaatttgttaagttattacaagatgtacgc |
27458279 |
T |
|
| Q |
243 |
agttttccttttgataaggaatggttggat |
272 |
Q |
| |
|
|| ||| |||||||||||| ||||||||| |
|
|
| T |
27458278 |
agctttgcttttgataaggcttggttggat |
27458249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 28479540 - 28479276
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
|||||| | ||||| |||||||||||||| | | |||||| |||||||||||||||| ||||||||||| | ||||||| ||| | ||| | ||| | |
|
|
| T |
28479540 |
cttgaggaactagtctccaagaatcatttggattgtgagaacttgtctttgttgactgctttccttgttaggaatccttctgttcgtttaaaggacattg |
28479441 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
|| |||||| |||||||||||| ||||||||| | |||||||| ||||||||||||||| |||| |||||||||||||| || || || | ||| |
|
|
| T |
28479440 |
cactgagtaatagatacaagggttg-tgcctacaatttactagccgaactattgaaattccttgaaacccatagtgtgttggaagtattggggccgtgcc |
28479342 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatg |
273 |
Q |
| |
|
||||| ||||| | |||||||||||||||| ||||| ||| ||| |||||||| |||||||||| |
|
|
| T |
28479341 |
actctaaatttgtggagttattacaagatgcgcgcagctttggtttagataaggattggttggatg |
28479276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 28508723 - 28508459
Alignment:
| Q |
8 |
cttgagaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacactt |
107 |
Q |
| |
|
|||||| | ||||| ||||||||| |||| | | |||||| |||||||||||||||| ||||||||||||| ||||||| ||| | | | | ||||| |
|
|
| T |
28508723 |
cttgagcaactagtctccaagaattatttggattgtgagaacttgtctttgttgactgttttccttgttaagaatccttctgttcatttgaaggacactg |
28508624 |
T |
|
| Q |
108 |
cattgagtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagcc |
207 |
Q |
| |
|
|| | |||| |||||||||||| ||||||||| | ||||| || ||||||||||||||| |||| |||||| ||||||| || || || || ||| |
|
|
| T |
28508623 |
cacttagtaatagatacaagggttg-tgcctacaatttactagctgaactattgaaattccttgaaacccatagtatgttggaagtattggggtcgtgcc |
28508525 |
T |
|
| Q |
208 |
actctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatg |
273 |
Q |
| |
|
||||| ||||| | |||||| ||||||||| ||||| ||| |||||||||||| |||||||||| |
|
|
| T |
28508524 |
actctaaatttgtggagttaatacaagatgcgcgcagctttggttttgataaggattggttggatg |
28508459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 53 - 340
Target Start/End: Complemental strand, 26204263 - 26203977
Alignment:
| Q |
53 |
tctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagcc |
152 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| | | | ||| |||||||| | |||| |||||||||||| ||||||||| | ||||| |
|
|
| T |
26204263 |
tctttgttgactgatttctttgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcctacaatttactagct |
26204165 |
T |
|
| Q |
153 |
gagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcctt |
252 |
Q |
| |
|
|| |||||||||||||| |||| |||| ||| ||||| || ||||| ||| ||||||||||||| | |||||||||||||||| | ||| ||| || |
|
|
| T |
26204164 |
gaactattgaaattcctcaaaacccataatgtattggaagtattaggctcattccactctgaatttctggagttattacaagatgcgcacagctttggtt |
26204065 |
T |
|
| Q |
253 |
ttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttgga |
340 |
Q |
| |
|
|||||||||| |||||||||| | |||||| || |||||||| | || | ||||| || |||||||| ||||| ||||| ||||| |
|
|
| T |
26204064 |
ttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttgcagaaattattgga |
26203977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 50 - 340
Target Start/End: Complemental strand, 26109974 - 26109685
Alignment:
| Q |
50 |
ttgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtcta |
149 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| | | | ||| |||||||| | |||| |||||||||||| ||||||||| | ||| |
|
|
| T |
26109974 |
ttgtctttgttgactgatttctttgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcctacaatttacta |
26109876 |
T |
|
| Q |
150 |
gccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttc |
249 |
Q |
| |
|
|| || |||||||||||||| |||| |||| | | ||||| | ||||| ||| ||||||||||||||| |||||||||||||||| | ||| ||| |
|
|
| T |
26109875 |
gctgaactattgaaattcctcaaaacccataatatattggaagaattaggatcataccactctgaatttatggagttattacaagatgcgcacagctttg |
26109776 |
T |
|
| Q |
250 |
cttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttgga |
340 |
Q |
| |
|
|||||||||||| |||||||||| | |||||| || |||||||| | || | ||||| || |||||||| ||||| ||||| ||||| |
|
|
| T |
26109775 |
gttttgataaggattggttggatggtgtcgaaaggcgggctttgttccctgatatacaagtatcacaagatgccttgcagaaattattgga |
26109685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 26138885 - 26138612
Alignment:
| Q |
23 |
tccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttct-tctaaggcacacttcattgagtagccga |
121 |
Q |
| |
|
|||||||||||||| | | || ||| ||||||||||||||||||||| |||||||||||||||| | ||| | ||| |||||||| | |||| | |
|
|
| T |
26138885 |
tccaagaatcatttggattgtgggaatttgtctttgttgactgatttctttgttaagcatccttc-tatctgtttaaaagacacttcacttagtaataca |
26138787 |
T |
|
| Q |
122 |
tacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatc |
221 |
Q |
| |
|
|||||||||| |||||||||| ||||| | |||||||||||||| |||| |||||| | ||||| || || || || ||||||||||||| | |
|
|
| T |
26138786 |
tacaagggttg-tgcctacaacgtactagctaaactattgaaattcctcaaaacccatagtatattggaagtattgggcacattccactctgaatttgtg |
26138688 |
T |
|
| Q |
222 |
gagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttc |
297 |
Q |
| |
|
|||||||||||||||| ||| || ||| |||||||||||| |||||||||| | |||||| || |||||||||| |
|
|
| T |
26138687 |
gagttattacaagatgcacgaagctttggttttgataaggattggttggatggtgtcgaaaggcgggctttgtttc |
26138612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 28060218 - 28060286
Alignment:
| Q |
384 |
aattggcttcctctgaagctgatttgcagagcatcactcaacaggaggtacaaattttacgaacacggg |
452 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
28060218 |
aattggcttcctctgaagctgttttgcagaacatcactcaacaggaggcacaaattttacaaactcggg |
28060286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 28070643 - 28070711
Alignment:
| Q |
384 |
aattggcttcctctgaagctgatttgcagagcatcactcaacaggaggtacaaattttacgaacacggg |
452 |
Q |
| |
|
||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
28070643 |
aattggcttcctctgaagctgttttgcagaacatcactcaacaggaggcacaaattttacaaactcggg |
28070711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 55 - 282
Target Start/End: Complemental strand, 26232313 - 26232087
Alignment:
| Q |
55 |
tttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccga |
154 |
Q |
| |
|
|||||||| ||||||| |||||||| ||||||| | | | ||| |||||||| | |||| |||||||||||| ||||||||| | |||| || |
|
|
| T |
26232313 |
tttgttgaatgatttctttgttaagaatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcctacaatttattagctga |
26232215 |
T |
|
| Q |
155 |
gctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcctttt |
254 |
Q |
| |
|
||| |||||||||| ||||||||||||||||||| || || || ||| ||||||||||||| |||||||||||||||| ||| || ||| |||| |
|
|
| T |
26232214 |
actactgaaattcctcaaaactcatagtgtgttggaagtattgggctcattccactctgaatttgaggagttattacaagatgcacgaaggtttggtttt |
26232115 |
T |
|
| Q |
255 |
gataaggaatggttggatgatatcgaaa |
282 |
Q |
| |
|
|||||||| |||||||||| | |||||| |
|
|
| T |
26232114 |
gataaggattggttggatggtgtcgaaa |
26232087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 153 - 272
Target Start/End: Original strand, 28136904 - 28137023
Alignment:
| Q |
153 |
gagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcctt |
252 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||| ||||| ||| |||||||||||||| | || || ||| ||||| |||| ||| || |
|
|
| T |
28136904 |
gagctattgaaattccttgaaactcatagtgtcttggatgtattaggctcatgccactctgaatttgtggatctactactagatgcgcgcaactttggtt |
28137003 |
T |
|
| Q |
253 |
ttgataaggaatggttggat |
272 |
Q |
| |
|
|||||||||| ||||||||| |
|
|
| T |
28137004 |
ttgataaggattggttggat |
28137023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 282
Target Start/End: Complemental strand, 26126746 - 26126520
Alignment:
| Q |
55 |
tttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattgagtagccgatacaagggttcatgcctacaactgtctagccga |
154 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| | | | ||| |||||||| | |||| |||||||||||| ||| ||||| | ||||| || |
|
|
| T |
26126746 |
tttgttgaatgatttctttgttaagcatccttctgtccgtttaaaagacacttcacttagtaatagatacaagggttg-tgcttacaatttactagctga |
26126648 |
T |
|
| Q |
155 |
gctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttcctttt |
254 |
Q |
| |
|
|| |||||||| || |||| || ||||||||||| || || || ||| ||||||||||||| |||||||||||||||| ||| || ||| |||| |
|
|
| T |
26126647 |
actgttgaaatttctcaaaacccacagtgtgttggaagtattggggtcattccactctgaatttgaggagttattacaagatgcacgaaggtttggtttt |
26126548 |
T |
|
| Q |
255 |
gataaggaatggttggatgatatcgaaa |
282 |
Q |
| |
|
|||||||| |||||||||| | |||||| |
|
|
| T |
26126547 |
gataaggattggttggatggtgtcgaaa |
26126520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 26176694 - 26176571
Alignment:
| Q |
159 |
ttgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgata |
258 |
Q |
| |
|
||||||||||| |||| || ||||||||||| || || || ||| ||||||||||||| |||||||||||||||| ||| || ||| |||||||| |
|
|
| T |
26176694 |
ttgaaattcctcaaaacccacagtgtgttggaagtattgggctcattccactctgaatttgaggagttattacaagatgcacgaaggtttggttttgata |
26176595 |
T |
|
| Q |
259 |
aggaatggttggatgatatcgaaa |
282 |
Q |
| |
|
|||| |||||||||| | |||||| |
|
|
| T |
26176594 |
aggattggttggatggtgtcgaaa |
26176571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 26126365 - 26126306
Alignment:
| Q |
373 |
tcttaagcatcaattggcttcctctgaagctgatttgcagagcatcactcaacaggaggt |
432 |
Q |
| |
|
|||||||||||||||||| |||||| |||||| |||| |||| |||| |||||| ||||| |
|
|
| T |
26126365 |
tcttaagcatcaattggcatcctctcaagctgttttggagagtatcaatcaacaagaggt |
26126306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 26176416 - 26176357
Alignment:
| Q |
373 |
tcttaagcatcaattggcttcctctgaagctgatttgcagagcatcactcaacaggaggt |
432 |
Q |
| |
|
|||||||||||||||||| |||||| |||||| |||| |||| |||| |||||| ||||| |
|
|
| T |
26176416 |
tcttaagcatcaattggcatcctctcaagctgttttggagagtatcaatcaacaagaggt |
26176357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 372 - 427
Target Start/End: Original strand, 28152501 - 28152556
Alignment:
| Q |
372 |
atcttaagcatcaattggcttcctctgaagctgatttgcagagcatcactcaacag |
427 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||| ||| |||| ||||||| |
|
|
| T |
28152501 |
atcttaagcatcaattgacatcctctgaagctgatttggagactatcattcaacag |
28152556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 27356982 - 27357015
Alignment:
| Q |
307 |
aagtctctcaagatgcattgcaaaaattgttgga |
340 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
27356982 |
aagtctctcaagatgcattgcaaaaactgttgga |
27357015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 433
Target Start/End: Complemental strand, 28508296 - 28508235
Alignment:
| Q |
372 |
atcttaagcatcaattggcttcctctgaagctgatttgcagagcatcactcaacaggaggta |
433 |
Q |
| |
|
|||||||||| |||||| | ||||||||||||| |||| |||| |||| |||||| |||||| |
|
|
| T |
28508296 |
atcttaagcaacaattgacatcctctgaagctgttttggagagtatcattcaacaagaggta |
28508235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0922 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0922
Description:
Target: scaffold0922; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 442
Target Start/End: Original strand, 2189 - 2615
Alignment:
| Q |
13 |
gaatctagtttccaagaatcatttagctattgagaaattgtctttgttgactgatttccttgttaagcatccttcatttcttctaaggcacacttcattg |
112 |
Q |
| |
|
||||||||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||| |||| ||||||||||| |
|
|
| T |
2189 |
gaatctagtttccgagaattatttggctattgagaacttgtctttgttgactgatttcctagttaagaatccttcagttct---aagggacacttcattg |
2285 |
T |
|
| Q |
113 |
agtagccgatacaagggttcatgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactct |
212 |
Q |
| |
|
|||| | ||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||| |
|
|
| T |
2286 |
agtaacagattcaagggtt-atgcctacaactgtctagctgagctattgaaattcctccaaaagcattacctgttggatgtgttaggttcaagccattct |
2384 |
T |
|
| Q |
213 |
gaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaaaagcttgctttgtttcatggttcgcaagtct |
312 |
Q |
| |
|
|||||| | ||| ||||||||||| | || || |||||||||||||| ||||||||||||| | | |||||||| || ||||||| ||||| ||||||| |
|
|
| T |
2385 |
gaatttgttgagctattacaagatatgcgtagatttccttttgataaagaatggttggatggtgttgaaaagctcgccttgtttcctggtttacaagtct |
2484 |
T |
|
| Q |
313 |
ctcaagatgcattgcaaaaattgttggactcaaaacaca-tttgacacaacgtgtgaagtatcttaagcatcaattggcttcctctgaagctgatttgca |
411 |
Q |
| |
|
||||| |||| ||||||| || |||||||||||||||| |||||| |||| |||| || ||||||| |||||||||||||||| |||||||| |||||| |
|
|
| T |
2485 |
ctcaaaatgcgctgcaaaattttttggactcaaaacacattttgactcaacatgtggaggatcttaaacatcaattggcttcctttgaagctgttttgca |
2584 |
T |
|
| Q |
412 |
gagcatcactcaacaggaggtacaaatttta |
442 |
Q |
| |
|
|| ||||||||||||||||| ||| |||||| |
|
|
| T |
2585 |
gaacatcactcaacaggaggcacagatttta |
2615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1147 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold1147
Description:
Target: scaffold1147; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 182 - 385
Target Start/End: Original strand, 888 - 1092
Alignment:
| Q |
182 |
tgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaagatgtacgcagttttccttttgataaggaatggttggatgatatcgaa |
281 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| | |||||| | |||||||| | || ||| ||||||| ||||| |||| |||| | ||||| |
|
|
| T |
888 |
tgtgttggatgtgttaggttcaagcaactctaaattggttgagttaatccaagatgtgcacatatttgcttttgacaaggatcggttagatggtgtcgaa |
987 |
T |
|
| Q |
282 |
aagcttgctttgtttcatggttcgcaagtctctcaagatgcattgcaaaaattgttggactcaaaacaca-tttgacacaacgtgtgaagtatcttaagc |
380 |
Q |
| |
|
|| | ||||||||| | ||| |||||||||| |||| ||||||||||||||||||||| |||||||| |||||| |||| |||| || ||||||||| |
|
|
| T |
988 |
aaacacactttgtttcctagtttacaagtctctctagatacattgcaaaaattgttggacttaaaacacattttgactcaacatgtggaggatcttaagc |
1087 |
T |
|
| Q |
381 |
atcaa |
385 |
Q |
| |
|
||||| |
|
|
| T |
1088 |
atcaa |
1092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 134 - 272
Target Start/End: Complemental strand, 8692582 - 8692444
Alignment:
| Q |
134 |
tgcctacaactgtctagccgagctattgaaattccttcaaactcatagtgtgttggatgtgttaggttcaagccactctgaatttatcgagttattacaa |
233 |
Q |
| |
|
||||||||||| || || |||||||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||||| | ||| || ||| | |
|
|
| T |
8692582 |
tgcctacaacttactggctgagctattgaaattccttgaaactcatagtgtcttggatgtattaggttcatgccactctgaatttgtggagctactacta |
8692483 |
T |
|
| Q |
234 |
gatgtacgcagttttccttttgataaggaatggttggat |
272 |
Q |
| |
|
|||| |||| ||| |||||||||||| ||||||||| |
|
|
| T |
8692482 |
gatgcgcgcaactttggttttgataaggattggttggat |
8692444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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