View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3119A-Insertion-9 (Length: 274)
Name: NF3119A-Insertion-9
Description: NF3119A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3119A-Insertion-9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 7 - 274
Target Start/End: Original strand, 4561213 - 4561480
Alignment:
| Q |
7 |
actctcaacacatcctcaaccaaaacatccctctcaaacatataaacacacatacattaataaatatacacacaaacaagttctaagaaaggattgaata |
106 |
Q |
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| T |
4561213 |
actctcaacacatcctcaaccaaaacatccctctcaaacatataaacacacatacattaataaatatacacacaaacaagttctaagaaaggattgaata |
4561312 |
T |
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| Q |
107 |
agattgcaacgaaagaaagactaaccagaatcaagaggaatataataaagtgaaccgacagtaacattatcaggaccatcaaggccattcacaccctcaa |
206 |
Q |
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| T |
4561313 |
agattgcaacgaaagaaagactaaccagaatcaagaggaatataataaagtgaaccgacagtaacattatcaggaccatcaaggccattcacaccctcaa |
4561412 |
T |
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| Q |
207 |
tactatccatactaaccccaaatctactagccaaagattcaacactatccccatctctcaacacataa |
274 |
Q |
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| T |
4561413 |
tactatccatactaaccccaaatctactagccaaagattcaacactatccccatctctcaacacataa |
4561480 |
T |
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