View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3119R-Insertion-23 (Length: 169)
Name: NF3119R-Insertion-23
Description: NF3119R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3119R-Insertion-23 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 2e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 2e-81
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 39514416 - 39514256
Alignment:
| Q |
9 |
tgaacaaccttagaatcacaatatgcacaagcatagtgcagtgcataggcatcatcaagagtcacactagattcgtctaaaagaagcttcagtaactcga |
108 |
Q |
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| T |
39514416 |
tgaacaaccttagaatcacaatatgcacaagcatagtgcagtgcataggcatcatcaagagtcacactagattcgtctaaaagaagcttcagtaactcga |
39514317 |
T |
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| Q |
109 |
cgtcgtcagggtccaatgccttaaggattttcctgatactcttatcactcacaatcacagg |
169 |
Q |
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|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39514316 |
cgtcatcagagtccaatgccttaaggattttcctgatactcttatcactcacaatcacagg |
39514256 |
T |
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