View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3119R-Insertion-3 (Length: 903)

Name: NF3119R-Insertion-3
Description: NF3119R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3119R-Insertion-3
NF3119R-Insertion-3
[»] chr8 (40 HSPs)
chr8 (8-895)||(1423352-1424220)
chr8 (415-558)||(1977210-1977353)
chr8 (422-578)||(24055942-24056098)
chr8 (421-554)||(8903858-8903991)
chr8 (415-558)||(16983394-16983537)
chr8 (457-555)||(8914813-8914911)
chr8 (460-558)||(17499270-17499368)
chr8 (457-551)||(35797437-35797531)
chr8 (415-558)||(28413906-28414049)
chr8 (462-550)||(9952802-9952890)
chr8 (420-552)||(32072102-32072234)
chr8 (415-558)||(34861229-34861365)
chr8 (415-558)||(43506538-43506678)
chr8 (505-578)||(6098794-6098867)
chr8 (415-556)||(35151768-35151909)
chr8 (415-558)||(5979880-5980022)
chr8 (463-548)||(17741574-17741659)
chr8 (457-549)||(23685173-23685265)
chr8 (457-553)||(45246476-45246572)
chr8 (457-552)||(31301157-31301251)
chr8 (776-886)||(10711976-10712088)
chr8 (420-548)||(11962729-11962856)
chr8 (475-578)||(36804856-36804959)
chr8 (424-558)||(41727439-41727573)
chr8 (505-558)||(7493379-7493432)
chr8 (457-548)||(4674952-4675039)
chr8 (420-558)||(6387568-6387705)
chr8 (483-558)||(14236406-14236481)
chr8 (462-548)||(4319780-4319866)
chr8 (470-540)||(9192056-9192126)
chr8 (457-523)||(35689522-35689588)
chr8 (460-525)||(1961327-1961392)
chr8 (529-578)||(5095777-5095826)
chr8 (462-558)||(13407360-13407457)
chr8 (476-545)||(34952504-34952573)
chr8 (420-524)||(43026298-43026400)
chr8 (460-548)||(9193427-9193515)
chr8 (457-524)||(1205869-1205936)
chr8 (472-558)||(25915086-25915175)
chr8 (481-548)||(35819198-35819265)
[»] chr3 (53 HSPs)
chr3 (415-558)||(41451932-41452075)
chr3 (415-558)||(24734705-24734848)
chr3 (415-558)||(28529253-28529394)
chr3 (415-558)||(20493482-20493625)
chr3 (415-558)||(37776740-37776883)
chr3 (415-558)||(46450067-46450209)
chr3 (415-558)||(46160949-46161090)
chr3 (459-558)||(29588770-29588869)
chr3 (457-558)||(18427187-18427288)
chr3 (415-578)||(48351436-48351599)
chr3 (457-571)||(38414689-38414803)
chr3 (457-558)||(20791338-20791439)
chr3 (475-578)||(2419481-2419584)
chr3 (424-566)||(8825008-8825150)
chr3 (415-558)||(5452099-5452240)
chr3 (457-557)||(22604602-22604702)
chr3 (421-558)||(55452052-55452187)
chr3 (463-548)||(19345047-19345132)
chr3 (422-558)||(50156697-50156831)
chr3 (415-551)||(29755500-29755636)
chr3 (474-558)||(52123993-52124077)
chr3 (457-558)||(14236061-14236162)
chr3 (458-546)||(26310495-26310583)
chr3 (479-566)||(10948589-10948676)
chr3 (420-558)||(27243050-27243189)
chr3 (496-558)||(24429062-24429124)
chr3 (776-848)||(50056893-50056966)
chr3 (413-523)||(30624631-30624739)
chr3 (513-564)||(38138613-38138664)
chr3 (420-558)||(41387568-41387704)
chr3 (474-548)||(49072064-49072138)
chr3 (428-566)||(138778-138914)
chr3 (457-532)||(7419241-7419316)
chr3 (463-558)||(15790407-15790501)
chr3 (504-547)||(22856282-22856325)
chr3 (460-558)||(44844026-44844125)
chr3 (458-548)||(50661568-50661659)
chr3 (484-558)||(752461-752535)
chr3 (776-863)||(28095952-28096039)
chr3 (505-555)||(29388634-29388684)
chr3 (479-553)||(39186028-39186102)
chr3 (504-558)||(43016502-43016556)
chr3 (841-887)||(50057279-50057325)
chr3 (420-552)||(13809087-13809219)
chr3 (426-544)||(40702173-40702289)
chr3 (457-544)||(41707490-41707577)
chr3 (457-524)||(43657067-43657134)
chr3 (776-823)||(50061382-50061429)
chr3 (516-558)||(742057-742099)
chr3 (421-578)||(40715879-40716036)
chr3 (503-548)||(41607499-41607544)
chr3 (457-542)||(42340873-42340958)
chr3 (457-498)||(46237143-46237184)
[»] chr6 (24 HSPs)
chr6 (420-558)||(34905341-34905479)
chr6 (463-555)||(16852013-16852105)
chr6 (425-565)||(10133188-10133328)
chr6 (415-558)||(445818-445961)
chr6 (457-556)||(5106340-5106439)
chr6 (423-558)||(31116161-31116296)
chr6 (457-558)||(21987334-21987435)
chr6 (425-558)||(1392640-1392770)
chr6 (463-548)||(32122843-32122928)
chr6 (457-578)||(32598965-32599086)
chr6 (462-578)||(32112734-32112850)
chr6 (462-549)||(12780805-12780892)
chr6 (475-552)||(12784982-12785059)
chr6 (457-558)||(2675937-2676038)
chr6 (504-558)||(16187469-16187523)
chr6 (504-558)||(16187687-16187741)
chr6 (420-548)||(35128769-35128898)
chr6 (457-558)||(19090251-19090353)
chr6 (509-566)||(17144700-17144757)
chr6 (525-558)||(34882267-34882300)
chr6 (415-558)||(12753797-12753940)
chr6 (503-558)||(8441886-8441941)
chr6 (503-558)||(8450690-8450745)
chr6 (415-448)||(12753758-12753791)
[»] chr2 (40 HSPs)
chr2 (205-392)||(2816572-2816752)
chr2 (8-144)||(2816830-2816966)
chr2 (457-578)||(44274276-44274397)
chr2 (457-556)||(9470123-9470222)
chr2 (415-558)||(26767798-26767941)
chr2 (420-578)||(6980137-6980295)
chr2 (415-558)||(12989191-12989334)
chr2 (415-578)||(45554567-45554722)
chr2 (462-578)||(25238294-25238411)
chr2 (421-570)||(34142164-34142313)
chr2 (483-554)||(7919311-7919382)
chr2 (457-556)||(19639135-19639234)
chr2 (457-556)||(19837728-19837827)
chr2 (425-558)||(35316438-35316569)
chr2 (425-525)||(2476546-2476644)
chr2 (457-558)||(11539465-11539569)
chr2 (462-566)||(12098895-12099000)
chr2 (474-554)||(38464222-38464302)
chr2 (479-558)||(10981582-10981661)
chr2 (415-549)||(18511255-18511389)
chr2 (494-566)||(472192-472264)
chr2 (420-578)||(16719447-16719605)
chr2 (462-564)||(30849284-30849386)
chr2 (458-548)||(32701513-32701603)
chr2 (462-548)||(37652292-37652378)
chr2 (424-548)||(17188076-17188198)
chr2 (415-558)||(32856172-32856319)
chr2 (425-558)||(36471875-36472008)
chr2 (510-558)||(4552877-4552925)
chr2 (508-570)||(14489564-14489626)
chr2 (484-550)||(15884498-15884564)
chr2 (462-558)||(43414402-43414498)
chr2 (781-883)||(25476329-25476432)
chr2 (457-558)||(28898073-28898175)
chr2 (776-848)||(17508848-17508921)
chr2 (457-498)||(41805873-41805914)
chr2 (420-558)||(24895303-24895440)
chr2 (528-578)||(25730456-25730506)
chr2 (510-548)||(30718374-30718412)
chr2 (457-554)||(42182931-42183029)
[»] chr4 (49 HSPs)
chr4 (458-578)||(39471200-39471320)
chr4 (421-566)||(43771132-43771277)
chr4 (418-558)||(20454543-20454681)
chr4 (424-556)||(10169684-10169814)
chr4 (420-558)||(8108961-8109099)
chr4 (415-557)||(50164395-50164537)
chr4 (457-558)||(722199-722300)
chr4 (457-558)||(47009231-47009332)
chr4 (415-558)||(33653526-33653669)
chr4 (415-551)||(49077249-49077385)
chr4 (457-558)||(754617-754718)
chr4 (415-553)||(20225383-20225519)
chr4 (462-556)||(24834625-24834719)
chr4 (415-558)||(26361345-26361480)
chr4 (457-578)||(24938432-24938553)
chr4 (457-556)||(50481584-50481683)
chr4 (457-558)||(49242212-49242313)
chr4 (458-564)||(22542424-22542530)
chr4 (425-578)||(19937189-19937341)
chr4 (457-558)||(34129437-34129538)
chr4 (457-578)||(52671872-52671993)
chr4 (457-578)||(37451030-37451149)
chr4 (457-555)||(48339380-48339478)
chr4 (457-550)||(38636379-38636472)
chr4 (463-554)||(31250924-31251015)
chr4 (462-548)||(38537560-38537649)
chr4 (465-554)||(45310989-45311078)
chr4 (415-558)||(40991626-40991769)
chr4 (424-539)||(46242000-46242113)
chr4 (457-548)||(5044587-5044678)
chr4 (457-548)||(49682838-49682929)
chr4 (421-536)||(50571870-50571985)
chr4 (512-558)||(11895134-11895180)
chr4 (457-578)||(13069983-13070104)
chr4 (457-578)||(25719129-25719251)
chr4 (457-558)||(51206085-51206187)
chr4 (473-550)||(13520007-13520084)
chr4 (456-548)||(18421878-18421968)
chr4 (457-498)||(21776942-21776983)
chr4 (424-545)||(33995985-33996106)
chr4 (415-524)||(47237812-47237921)
chr4 (776-835)||(11393149-11393209)
chr4 (776-835)||(11402876-11402936)
chr4 (457-528)||(30866999-30867070)
chr4 (461-556)||(50652375-50652470)
chr4 (474-556)||(46536301-46536383)
chr4 (506-556)||(52279298-52279348)
chr4 (506-547)||(46287532-46287573)
chr4 (457-498)||(48608122-48608163)
[»] chr1 (50 HSPs)
chr1 (457-597)||(32211786-32211922)
chr1 (415-558)||(41958085-41958226)
chr1 (415-558)||(26980299-26980442)
chr1 (463-573)||(33193098-33193208)
chr1 (457-558)||(30678948-30679049)
chr1 (457-558)||(41948183-41948284)
chr1 (457-558)||(19101638-19101739)
chr1 (415-558)||(2225226-2225367)
chr1 (415-550)||(6325858-6325990)
chr1 (415-555)||(11987626-11987766)
chr1 (457-550)||(1093118-1093211)
chr1 (463-556)||(39499442-39499535)
chr1 (415-596)||(6133628-6133804)
chr1 (466-558)||(8899065-8899157)
chr1 (457-549)||(22540410-22540502)
chr1 (474-555)||(10659808-10659889)
chr1 (421-558)||(28218085-28218222)
chr1 (415-559)||(3872670-3872813)
chr1 (457-549)||(15523252-15523344)
chr1 (457-549)||(15531246-15531338)
chr1 (510-566)||(37552978-37553034)
chr1 (415-578)||(8741240-8741405)
chr1 (457-546)||(49730906-49730995)
chr1 (426-578)||(51732290-51732440)
chr1 (460-566)||(31866361-31866466)
chr1 (464-558)||(33114020-33114114)
chr1 (521-573)||(16948551-16948603)
chr1 (462-558)||(29673522-29673618)
chr1 (457-553)||(37525571-37525667)
chr1 (415-556)||(931374-931515)
chr1 (457-554)||(15468262-15468359)
chr1 (460-541)||(46335142-46335223)
chr1 (776-823)||(1286185-1286232)
chr1 (471-550)||(45179291-45179370)
chr1 (457-558)||(13114706-13114808)
chr1 (457-558)||(41918037-41918139)
chr1 (457-558)||(15928597-15928698)
chr1 (462-578)||(15906458-15906573)
chr1 (457-548)||(29418523-29418615)
chr1 (420-552)||(35336871-35336997)
chr1 (463-558)||(39974237-39974326)
chr1 (503-558)||(12767365-12767420)
chr1 (507-554)||(15906632-15906679)
chr1 (505-548)||(44272008-44272051)
chr1 (457-548)||(50539166-50539257)
chr1 (457-558)||(11135781-11135883)
chr1 (457-498)||(15660935-15660976)
chr1 (483-556)||(27570293-27570366)
chr1 (529-578)||(33113990-33114039)
chr1 (505-558)||(47644334-47644387)
[»] chr7 (44 HSPs)
chr7 (413-558)||(46517291-46517434)
chr7 (470-558)||(27888337-27888425)
chr7 (415-555)||(31502504-31502644)
chr7 (415-558)||(32205079-32205219)
chr7 (415-558)||(22189939-22190082)
chr7 (425-566)||(7459353-7459494)
chr7 (462-596)||(25686838-25686968)
chr7 (415-563)||(33008104-33008252)
chr7 (457-556)||(7775042-7775140)
chr7 (420-558)||(12263473-12263611)
chr7 (424-558)||(27949282-27949416)
chr7 (474-566)||(6442224-6442316)
chr7 (415-558)||(14795131-14795274)
chr7 (415-558)||(15242123-15242266)
chr7 (460-558)||(32212907-32213004)
chr7 (457-558)||(11692221-11692322)
chr7 (457-558)||(11824113-11824214)
chr7 (415-558)||(48374476-48374617)
chr7 (471-554)||(23564076-23564159)
chr7 (421-558)||(19422871-19423008)
chr7 (420-566)||(39254088-39254234)
chr7 (430-556)||(32178843-32178966)
chr7 (457-558)||(44350839-44350940)
chr7 (460-564)||(10933996-10934100)
chr7 (415-526)||(12270988-12271096)
chr7 (424-548)||(25092708-25092832)
chr7 (457-558)||(24539159-24539261)
chr7 (505-550)||(36845567-36845612)
chr7 (800-884)||(39364335-39364420)
chr7 (457-548)||(19494385-19494477)
chr7 (424-532)||(44510999-44511107)
chr7 (457-558)||(17749736-17749838)
chr7 (516-573)||(1316374-1316431)
chr7 (505-558)||(6580039-6580092)
chr7 (415-516)||(8073367-8073468)
chr7 (473-550)||(9648982-9649059)
chr7 (520-556)||(36845530-36845566)
chr7 (527-566)||(12167319-12167358)
chr7 (460-558)||(17354563-17354662)
chr7 (480-558)||(1688048-1688126)
chr7 (457-558)||(25428515-25428617)
chr7 (516-558)||(31874117-31874159)
chr7 (505-554)||(3855851-3855900)
chr7 (474-558)||(13919839-13919924)
[»] chr5 (34 HSPs)
chr5 (415-558)||(10142013-10142154)
chr5 (415-558)||(28490759-28490902)
chr5 (464-557)||(39246657-39246750)
chr5 (457-555)||(34368402-34368500)
chr5 (457-558)||(5413774-5413875)
chr5 (457-566)||(25710501-25710610)
chr5 (421-556)||(28090268-28090401)
chr5 (457-556)||(17537141-17537240)
chr5 (457-550)||(41330438-41330531)
chr5 (457-556)||(43405435-43405534)
chr5 (457-555)||(27592492-27592590)
chr5 (456-558)||(37455390-37455491)
chr5 (457-558)||(30325911-30326012)
chr5 (460-550)||(28434863-28434951)
chr5 (458-558)||(41105607-41105707)
chr5 (415-554)||(28611819-28611958)
chr5 (460-566)||(34384720-34384826)
chr5 (462-550)||(1923597-1923685)
chr5 (420-556)||(25630812-25630948)
chr5 (505-548)||(31885878-31885921)
chr5 (464-566)||(10666717-10666819)
chr5 (423-556)||(17434888-17435019)
chr5 (458-551)||(28155746-28155837)
chr5 (457-558)||(42224627-42224729)
chr5 (774-883)||(1678953-1679066)
chr5 (507-558)||(28223813-28223864)
chr5 (505-548)||(36337937-36337980)
chr5 (474-552)||(10950145-10950223)
chr5 (474-548)||(25919270-25919344)
chr5 (505-558)||(14553602-14553655)
chr5 (459-520)||(43541895-43541956)
chr5 (459-558)||(24915099-24915199)
chr5 (462-556)||(2525621-2525715)
chr5 (494-548)||(4427321-4427375)
[»] scaffold0018 (1 HSPs)
scaffold0018 (461-566)||(27858-27963)
[»] scaffold0204 (1 HSPs)
scaffold0204 (457-555)||(26902-27000)
[»] scaffold0543 (1 HSPs)
scaffold0543 (457-552)||(9706-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (457-552)||(11252-11347)
[»] scaffold0245 (1 HSPs)
scaffold0245 (776-823)||(12452-12499)


Alignment Details
Target: chr8 (Bit Score: 672; Significance: 0; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 672; E-Value: 0
Query Start/End: Original strand, 8 - 895
Target Start/End: Original strand, 1423352 - 1424220
Alignment:
Q  8 agttaatatgtttcattcttggagctggatccctcattgcactaaacaacttgtggacaatgggagattactactaccaagtgttccctgtaagaatctc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1423352 agttaatatgtttcattcttggagctggatccctcattgcactaaacaacttgtggacaatgggagattactactaccaagtgtttcctgtaagaatctc 1423451  T
Q  108 atcatttcaaaaactatatatgaaccatctttcattctttaggttttgtatgatttaatttagagttaatagtgttcagatatttattttaaattaaaat 207  Q
    |||||||||||||||||    ||||||||| ||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||     ||    
T  1423452 atcatttcaaaaactat----gaaccatctctcattctttaggttttgtatgattta-----gagttaatagtgttcagatatttattttaaa-----at 1423537  T
Q  208 aaatatgatcataatatctttgaaagagtatacatgatccaaatagttaaatcatctactttt-gcttccaaaggatttgaattgttgcaatgaccgttt 306  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1423538 aaatatgatcataatatctcttaaagagtatacatgatcctaatagttaaatcatctactttttgcttccaaaggatttgaattgttgcaatgaccgttt 1423637  T
Q  307 cttcttcactgtatgagcactacaataattagaaatcttaaagcattgaatatgcaaaacttggaccaagaaagatcaaagatccaatatatatgtaaca 406  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1423638 cttcttcagtgtatgagcactgcaataattagaaatcttaaagcattgaatatgcaaaacttggaccaagaaagatcaaagatccaatatatatgtgaca 1423737  T
Q  407 tgttccatgaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagt 506  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1423738 tgttccatgaatactagcaacactcacttttcaacactctttagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagt 1423837  T
Q  507 tcaattttcaaagt---gtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaattaagagagtgttgctaattaatta 603  Q
    ||||||||||||||   ||||| ||||||||         ||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  1423838 tcaattttcaaagtgtagtagacccacaatg---------aataagagaatgaattttagagaaaatgtttaaaattaagagagtgttgctaattaatta 1423928  T
Q  604 gggacaataaatactcttataaagctttgccgatttcagttcaatcctatgacaagaataacatactcccctgccagtagcaaaatgattatagcta-tt 702  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  1423929 gggacaataagtactcttataaagctttgccgatttcagttcaatcctatgacaagaataacatactcccctgctagtagcaaaatgattatagctattt 1424028  T
Q  703 ttttatctccgtatgaatattttccccctgctagtagcaaaatgaatatttcttggggagctggatccctatatatataaacacattagtagttgtgcat 802  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||    
T  1424029 ttttatctccgtatgaatatttttcccctgctagtagcaaaatgaatatttcttggagagctggatccc--tatatataaacacattagtagttgtacat 1424126  T
Q  803 tttttatctctgaaatataatg-ttagttttcacgtggcatcagagctcctgatcttggggggtcttgtttccgcataaaccctagttgcagtc 895  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  1424127 tttttgtctctgaaatataatgtttagttttcacgtggcatcagagctcccgatcttgggaggtcttgtttccgcataaaccctagttgcagtc 1424220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 1977353 - 1977210
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| ||||||| |||||||||| ||||||||||  || | |  ||||||| | || ||| |||||||||||||||||||||||||||  | ||||||||    
T  1977353 gaatgctagcaatactcactttttaacactctctctagcact--cactcttctgttggatgaaatcaatgtatgtccaaccactttgtgtgggttcaatt 1977256  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  1977255 ttcaaagtgtagatccacaatgatttaaaccaataaaagagtgagt 1977210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 422 - 578
Target Start/End: Complemental strand, 24056098 - 24055942
Alignment:
Q  422 agcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    |||||||||||||||||||| ||||||  || | |  | ||||||||| |||| |||| ||||||||||| ||||||||||   ||||||||||||||||    
T  24056098 agcaacactcacttttcaacgctctctttagcact--cgctcttttatcagatgaaattaatgtatgtcccaccactttgtgtaagttcaattttcaaag 24056001  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    |||||| ||||||| |||||||||||||||||||||||| ||| ||||| |||| ||||    
T  24056000 tgtagacccacaattatttaaaccaataagagagtgagtgttagagaaagtgttcaaaa 24055942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 8903858 - 8903991
Alignment:
Q  421 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 518  Q
    |||||||||||| |||||||||||||||  |||| |  ||||  |||||| ||| |||||||||||||||| ||||||||||    ||||||||||||||    
T  8903858 tagcaacactcatttttcaacactctctctagtact--cacttgtttatttgatgaaatcaatgtatgtcccaccactttgtgtcggttcaattttcaaa 8903955  T
Q  519 gtgtagatccacaatgatttaaaccaataagagagt 554  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8903956 gtgtagacccacaatgatttaaaccaataagagagt 8903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 16983394 - 16983537
Alignment:
Q  415 gaatactagcaacactcacttttcaacactct--ctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||||||||||||||||||||||||||  |||| | |  ||||  |||||| |||||||||| | ||||||| | ||||||||  | ||||||||    
T  16983394 gaatgctagcaacactcacttttcaacactctatctagcact--cactgatttattggataaaatcattttatgtcccatcactttgtgggggttcaatt 16983491  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||  |||||||||||||||||||||||||||||||    
T  16983492 ttcaaagtgtagactcacaatgatttaaaccaataagagagtgagt 16983537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 457 - 555
Target Start/End: Original strand, 8914813 - 8914911
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||||| ||| ||||||| |||||||||||| ||||||||||  | ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  8914813 cactctttcattggataaaaccaatgtatgtcccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtg 8914911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 460 - 558
Target Start/End: Complemental strand, 17499368 - 17499270
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17499368 tcttttattggatgaaatcaatatatgtcccaccattttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 17499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 35797437 - 35797531
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagag 551  Q
    |||||||||||| |||||||||||||||||| | ||||||||||  |||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  35797437 cactcttttattggataaaatcaatgtatgttccaccactttgtgcgagttcaatttttaaagtgtaaatccacaatgatttaaatcaataagag 35797531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 28414049 - 28413906
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||| |||||||||||||||||||||||||        |||| ||||||| ||| |||||||||||||||| ||||||||||  ||||||||||||    
T  28414049 gaatgctaacaacactcacttttcaacactctctctagcgctcacttttttattcgatgaaatcaatgtatgtcccaccactttgtgtgagttcaatttt 28413950  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||| |||| ||| |||||||||||||||||| ||| |||||    
T  28413949 caaagtatagacccataatgatttaaaccaataaaagaatgagt 28413906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 9952890 - 9952802
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    ||||||| ||| ||||||||| |||||| ||||||||||  ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  9952890 ttttattggatgaaatcaatgcatgtcccaccactttgtgtgagttcaattttcaaagtgtaaacccacaatgatttaaaccaataaga 9952802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 420 - 552
Target Start/End: Original strand, 32072102 - 32072234
Alignment:
Q  420 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 517  Q
    ||||||||| |||||||||||||||||||  || | |  |||||||||||| ||| |||| ||||||||||| ||||||||||  | |||||||||| ||    
T  32072102 ctagcaacattcacttttcaacactctctctagcact--cactcttttattggatgaaatgaatgtatgtcccaccactttgtgtgggttcaatttttaa 32072199  T
Q  518 agtgtagatccacaatgatttaaaccaataagaga 552  Q
    |||||||| ||||||| ||||||| ||||||||||    
T  32072200 agtgtagacccacaattatttaaatcaataagaga 32072234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 34861365 - 34861229
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||| | |||||||||||||||||||||| | |  |||||||||||| ||| |||||||||||||||| ||||||||||    ||||||||||    
T  34861365 gaatgctagcacctctcacttttcaacactctctagcact--cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtaggttcaatttt 34861268  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||      ||||||| ||||||||||||||||||||||||    
T  34861267 caaagt-----cccacaataatttaaaccaataagagagtgagt 34861229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 43506538 - 43506678
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||| |||||||||||  | |  |||| ||||||| |||| ||||||||||||| | ||||||||||  | |||| | |||    
T  43506538 gaatgctagcaacactcacttttgaacactctctaacact--cact-ttttattggatataatcaatgtatgttccaccactttgtgtgggttctacttt 43506634  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||| ||||||| |||||||||||||| |||||||||||||||||    
T  43506635 caatgtgtagacccacaatgatttaagccaataagagagtgagt 43506678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 505 - 578
Target Start/End: Complemental strand, 6098867 - 6098794
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||| |||||||||||    
T  6098867 gttcaattttcaaagtgtagatccacaataatttaaatcaataagagagtgagtattagagagaatgtttaaaa 6098794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 415 - 556
Target Start/End: Complemental strand, 35151909 - 35151768
Alignment:
Q  415 gaatactagcaacactcacttttcaacactc--tctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    ||||||||||||||||||||||| |||||||  | ||| ||||  ||||||||||| ||| |||||||||||||||| |||| |||||  |  |||||||    
T  35151909 gaatactagcaacactcactttttaacactctttttagcattt--actcttttattggatgaaatcaatgtatgtcccaccattttgtggggattcaatt 35151812  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    || |||||||||| ||||||| ||| |||| ||||||| |||||    
T  35151811 tttaaagtgtagacccacaataattcaaactaataagaaagtga 35151768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 5979880 - 5980022
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||||||||||| |||||||||||||||||    |  |||||||| |||| ||| | |||||||||||||| ||||||||||  | ||||||||||    
T  5979880 gaatgctagcaacacttacttttcaacactctctctagtagacactcttctattggatgagatcaatgtatgtcccaccactttgtgtgggttcaatttt 5979979  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||  |  ||||||| ||| |||||||||||||||||||    
T  5979980 caaagtgtgaactcacaatggttt-aaccaataagagagtgagt 5980022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 17741659 - 17741574
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||||| ||| |||||||||||||||| |||| ||||| |||||||||||||||||||||||| | | |||| |||||||||||||    
T  17741659 tttattggatgaaatcaatgtatgtcccaccattttgtgagagttcaattttcaaagtgtagacctataatggtttaaaccaataa 17741574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 549
Target Start/End: Original strand, 23685173 - 23685265
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 549  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| |||||||||||| | ||||||||||||||||||||    
T  23685173 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagattcgcaatgatttaaaccaataag 23685265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 45246476 - 45246572
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagag 553  Q
    |||| ||||||| |||||||||||||||||||  |||||||| |  |||||| |||| |||||||||||||  |||||||||||| |||||||||||    
T  45246476 cactattttattggataaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagag 45246572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 31301157 - 31301251
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 552  Q
    |||||||||||| ||| |||||||||||||| | ||||||||||  |||||| |||||||| |||||||| || ||| ||||||||||||||||||    
T  31301157 cactcttttattggatgaaatcaatgtatgttccaccactttgtgtgagttctattttcaatgtgtagat-cataataatttaaaccaataagaga 31301251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 776 - 886
Target Start/End: Original strand, 10711976 - 10712088
Alignment:
Q  776 tatataaacacattagtagttgtgcatt-ttttatctctgaaatataatgtt-agttttcacgtggcatcagagctcctgatcttggggggtcttgtttc 873  Q
    |||||||| |||||||| | | | |||| |||||||||||| ||||||| || ||||||||| |||||||||| |||   ||||||||| ||||||||||    
T  10711976 tatataaatacattagtggatatacattattttatctctgacatataatattcagttttcacatggcatcagaactctcaatcttggggagtcttgtttc 10712075  T
Q  874 cgcataaacccta 886  Q
    |||||||||||||    
T  10712076 cgcataaacccta 10712088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 420 - 548
Target Start/End: Complemental strand, 11962856 - 11962729
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||| |||||||||||||||||| ||||   ||   ||||||||||||  |||||||||| |||| ||| |||| ||| |    |||||||||||||||    
T  11962856 ctagcgacactcacttttcaacacgctctttaatactcactcttttattgaataaaatcaaagtatatcccaccattttatgtaggttcaattttcaaag 11962757  T
Q  520 tgtagatccacaatgatttaaaccaataa 548  Q
    |||||||||| ||||||||||||||||||    
T  11962756 tgtagatcca-aatgatttaaaccaataa 11962729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 475 - 578
Target Start/End: Complemental strand, 36804959 - 36804856
Alignment:
Q  475 aatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgttt 574  Q
    ||||||||||||||| |||| |||||  | |||||||||||||| | || ||||||||| ||||||| |||||||||||| ||| ||| ||| ||||||     
T  36804959 aatcaatgtatgtcccaccattttgtgtgggttcaattttcaaaatatacatccacaataatttaaatcaataagagagtaagtattagagagaatgttg 36804860  T
Q  575 aaaa 578  Q
    ||||    
T  36804859 aaaa 36804856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 424 - 558
Target Start/End: Original strand, 41727439 - 41727573
Alignment:
Q  424 caacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 521  Q
    |||||||||||||| ||||||||||  || | |  ||||||||| ||||||||||||||||||||||| ||| ||||||    ||||  |||| || |||    
T  41727439 caacactcacttttgaacactctctttagcaat--cactcttttgttagataaaatcaatgtatgtcccaccgctttgtgtaggttctgtttttaatgtg 41727536  T
Q  522 tagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||  || ||||||||||||||| ||||||||||||    
T  41727537 tagactcataatgatttaaaccaacaagagagtgagt 41727573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 7493432 - 7493379
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7493432 gttctattttcaaagtgtagactcacaatgatttaaaccaataagagagtgagt 7493379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 4674952 - 4675039
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||||||||||||||| ||||||||||    || | ||||||||  ||||| ||||||||||||||||   |||||||||||||||||||||    
T  4674952 cactcttttattagatgaaatcaatgt----cctatcactttgtgtgagtttaattttcaaagtgtagtcacacaatgatttaaaccaataa 4675039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 420 - 558
Target Start/End: Original strand, 6387568 - 6387705
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    |||||||||||| |||||  ||||||||||  | |  |||||||||||| |||||||||||||||||||| |||| ||| |  | |||| |||| |||||    
T  6387568 ctagcaacactctcttttggacactctctaacact--cactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaag 6387665  T
Q  520 tgta-gatccacaatgatttaaaccaataagagagtgagt 558  Q
    | || || ||||| || ||||| ||||||||||| |||||    
T  6387666 tatacgacccacattgttttaacccaataagagaatgagt 6387705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 483 - 558
Target Start/End: Original strand, 14236406 - 14236481
Alignment:
Q  483 tatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| ||||||||||   ||||||||||| |||||||||   |||||| ||||||||||| ||||||||||||    
T  14236406 tatgtcccaccactttgtgtaagttcaattttgaaagtgtaggcgcacaataatttaaaccaacaagagagtgagt 14236481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 4319866 - 4319780
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||||||||||||||| |||||  | ||||||||  || || ||||||||||||||||| | ||| | ||||||| ||||||    
T  4319866 ttttattagataaaatcaatgcatgtctcatcactttgtgtgaatttaattttcaaagtgtagacctacactaatttaaatcaataa 4319780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 540
Target Start/End: Original strand, 9192056 - 9192126
Alignment:
Q  470 gataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaa 540  Q
    |||||||||||||||| ||| ||||||||||  | |||||||||| ||| ||||||  |||||||||||||    
T  9192056 gataaaatcaatgtatatcccaccactttgtgtgggttcaatttttaaattgtagactcacaatgatttaa 9192126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 523
Target Start/End: Original strand, 35689522 - 35689588
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 523  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||||||||||||    
T  35689522 cacttttttattggatgaaatcaatgtatgtcccaccactttatgtgagttccattttcaaagtgta 35689588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 525
Target Start/End: Original strand, 1961327 - 1961392
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga 525  Q
    ||||||||| ||||||||||| ||| |||| |||||||||   | |||||||||||||||||||||    
T  1961327 tcttttattggataaaatcaaggtacgtcccaccactttgcgtgggttcaattttcaaagtgtaga 1961392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 5095826 - 5095777
Alignment:
Q  529 acaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    |||||||||||||||||||||||||||||| ||| |||  ||||||||||    
T  5095826 acaatgatttaaaccaataagagagtgagtattagagaggatgtttaaaa 5095777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 462 - 558
Target Start/End: Complemental strand, 13407457 - 13407360
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| |||||||||||||||||||| |||| |||    | |||| |||||||||||||| || ||||| |||||||| ||||| ||||| |||||    
T  13407457 ttttattggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaacccaatgagagaatgagt 13407360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 476 - 545
Target Start/End: Original strand, 34952504 - 34952573
Alignment:
Q  476 atcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaa 545  Q
    |||||||||||||| |||| |||||  || ||||||||||||  |||||| || ||||||||||||||||    
T  34952504 atcaatgtatgtcccaccattttgtgggatttcaattttcaatatgtagacccgcaatgatttaaaccaa 34952573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 524
Target Start/End: Original strand, 43026298 - 43026400
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||||| || ||||| |||||||||||| | |  |||| ||||||||| ||||||||||||||||||  ||||||| |  | |||| |||| |||||    
T  43026298 ctagcaacattctcttttaaacactctctagcact--cacttttttattaggtaaaatcaatgtatgtcctgccactttatgtgggttccatttccaaag 43026395  T
Q  520 tgtag 524  Q
    |||||    
T  43026396 tgtag 43026400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 548
Target Start/End: Original strand, 9193427 - 9193515
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||| ||| |||| | ||||||||  || |||||||   |||||||||||||||||||||| | ||||| ||| ||||||||||    
T  9193427 tcttttatttgatgaaattagtgtatgtctcactactttgtgtaagttcaattttcaaagtgtagacctacaataattaaaaccaataa 9193515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 524
Target Start/End: Original strand, 1205869 - 1205936
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    |||||||||||||| |||||| ||||||||||  |||||||| || | |||| |||| ||||||||||    
T  1205869 cactcttttattaggtaaaattaatgtatgtctcaccactttatatgggttctatttccaaagtgtag 1205936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 558
Target Start/End: Original strand, 25915086 - 25915175
Alignment:
Q  472 taaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga---tccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||||||| || ||||| |  | |||| ||||||||||||||||   |||||| |||||| | ||||||| |||||||||    
T  25915086 taaaatcaatgtatgtcctactactttatttgggttccattttcaaagtgtagaggttccacattgatttcacccaataaaagagtgagt 25915175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 548
Target Start/End: Original strand, 35819198 - 35819265
Alignment:
Q  481 tgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||| |||| |||||  | | |||||||||||||| |||| |||||||||||||||| |||||    
T  35819198 tgtatgtcccaccattttgtgtgggctcaattttcaaagtatagacccacaatgatttaaactaataa 35819265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 41452075 - 41451932
Alignment:
Q  415 gaatactagcaacactcacttttcaacac--tctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||||||||||||||||||||||||||||  ||||||||| |  |||||||||||| ||| ||||||| |||||||| ||||||||||  | ||||||||    
T  41452075 gaatactagcaacactcacttttcaacacaatctctagtact--cactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaatt 41451978  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  41451977 ttcaaagagtagacccacaatgatttaaaccaataagagagtgagt 41451932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 24734705 - 24734848
Alignment:
Q  415 gaatactagcaacactcacttttcaacac--tctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||||||||||||||||||||||||||||  ||||||||| |  |||||||||||| ||| ||||||| |||||||| ||||||||||  | ||||||||    
T  24734705 gaatactagcaacactcacttttcaacacaatctctagtact--cactcttttattggatgaaatcaaagtatgtcccaccactttgtgtgggttcaatt 24734802  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| ||||  ||||||||||||||||||||||||||||||||    
T  24734803 ttcaaagagtaggcccacaatgatttaaaccaataagagagtgagt 24734848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 28529253 - 28529394
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||||||||||||||||||||||||||||  || | |  |||||||||||| ||| |||||||||||||||| |||||| |||  | ||||||||    
T  28529253 gaatgctagcaacactcacttttcaacactctctctagcact--cactcttttattggatgaaatcaatgtatgtcccaccactgtgt--gggttcaatt 28529348  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  28529349 ttcaaagtgtagacccacaatgatttaaaccaataagagagtgagt 28529394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 20493625 - 20493482
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||||||||||||||   |    ||||| |||||| ||| |||||||||||||||| ||||||||||  | ||||||| ||    
T  20493625 gaatgctagcaacactcacttttcaacactctctctaacactcactcatttattggatgaaatcaatgtatgtcctaccactttgtgggggttcaatatt 20493526  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  20493525 caaagtgtagacccacaatgatttaaaccaataagagagtgagt 20493482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 37776883 - 37776740
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| ||||||||||||||||||||||||| |||  || | |  |||||||||||||||| |||||||||||||||| ||||||||||  | ||||||||    
T  37776883 gaatgctagcaacactcacttttcaacactttctccagcact--cactcttttattagatgaaatcaatgtatgtcctaccactttgtgtgggttcaatt 37776786  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||    
T  37776785 ttcaaagtgtagacctacaatgatttaaaccactaagagagtgagt 37776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 46450067 - 46450209
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccacttt-gtaagagttcaattt 513  Q
    |||| |||||||||||||||||| |||||||||||| | |  ||||||||||||||||  ||||||||||||||| |||||||| ||  | |||| ||||    
T  46450067 gaatgctagcaacactcacttttgaacactctctagcact--cactcttttattagatggaatcaatgtatgtcccaccacttttgtgtgggttctattt 46450164  T
Q  514 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
     ||||||||||| ||||||||||||||||||||||||||||||||    
T  46450165 gcaaagtgtagacccacaatgatttaaaccaataagagagtgagt 46450209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 46160949 - 46161090
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||| |||||||||||| | |  |||||||||||| ||| ||||||||  |||||| ||||||||||    |||| ||||     
T  46160949 gaatgctagcaacactcacttttgaacactctctagcact--cactcttttattggatgaaatcaatacatgtccgaccactttgtgttggttctatttc 46161046  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  46161047 caaagtgtagatccataatgatttaaaccaataagagagtgagt 46161090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 459 - 558
Target Start/End: Complemental strand, 29588869 - 29588770
Alignment:
Q  459 ctcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||| ||||||||||||||||||||   |||||| |  ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  29588869 ctcttttattggataaaatcaatgtatgtcctttcactttatgtgagttcaattttcaaagtgtagacccacaatgatttaaatcaataagagagtgagt 29588770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 18427288 - 18427187
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||| |||||| ||| |||||||||||||||| |||| |||||  | |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18427288 cactcatttattggatgaaatcaatgtatgtcccaccattttgtgtgggttctattttcaaagtgtagacccacaatgatttaaaccaataagagagtga 18427189  T
Q  557 gt 558  Q
    ||    
T  18427188 gt 18427187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 415 - 578
Target Start/End: Original strand, 48351436 - 48351599
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||| ||||||||| |||| ||||||||||   |   ||||||||||||| |||||||||||| ||||||  || |||||||  | ||||||||||    
T  48351436 gaatgctaacaacactcagtttttaacactctctttaagacacactcttttattggataaaatcaatatatgtctcactactttgtgtgggttcaatttt 48351535  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    ||||||||| ||||| ||||||||||| ||||||||||  |||| ||| |||||||||| ||||    
T  48351536 caaagtgtatatccataatgatttaaatcaataagagaaagagtattagagaaaatgttcaaaa 48351599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 457 - 571
Target Start/End: Original strand, 38414689 - 38414803
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||| | ||||||||| |||||||||||||| |||| |||||  | ||| |||||| ||||||||||||||| || ||||||||||||||||||||||    
T  38414689 cactctctcattagataagatcaatgtatgtcccaccattttgtgtgggtttaatttttaaagtgtagatccacgataatttaaaccaataagagagtga 38414788  T
Q  557 gttttaaagaaaatg 571  Q
    || ||||||| ||||    
T  38414789 gtgttaaagagaatg 38414803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 20791338 - 20791439
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||| |||||    
T  20791338 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtga 20791437  T
Q  557 gt 558  Q
    ||    
T  20791438 gt 20791439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 475 - 578
Target Start/End: Complemental strand, 2419584 - 2419481
Alignment:
Q  475 aatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgttt 574  Q
    |||||||| |||||| ||||||||| | |||||| |||| ||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||     
T  2419584 aatcaatgcatgtcctaccactttgcatgagttctatttccaatgtgtagacccacaatgatttaaaccaataagaaagtgagtattaaagaaagtgttc 2419485  T
Q  575 aaaa 578  Q
    ||||    
T  2419484 aaaa 2419481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 424 - 566
Target Start/End: Complemental strand, 8825150 - 8825008
Alignment:
Q  424 caacactcacttttcaaca--ctctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 521  Q
    ||||||||||||||||||   |||||||||| |  ||| |||||||||||| |||||||| ||||||| |||| ||| |  | ||||||||||||||||     
T  8825150 caacactcacttttcaaccatctctctagtact--cacccttttattagatgaaatcaatatatgtcccaccattttatgcgggttcaattttcaaagtc 8825053  T
Q  522 tagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    || |  |||||| |||||||||||||||||||||||| |||||||    
T  8825052 tacactcacaataatttaaaccaataagagagtgagtattaaaga 8825008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 5452240 - 5452099
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||||||||||||||   |  | |||||||||||| ||| |||||||||||| ||| ||||||||||  |  |||||||||    
T  5452240 gaatgctagcaacactcacttttcaacactctctttaacattcactcttttattggatgaaatcaatgtatttcccaccactttgtgtggattcaatttt 5452141  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    | |||||||||  | ||| |||||||| ||||||||||| ||||    
T  5452140 ctaagtgtaga--cccaaggatttaaatcaataagagagcgagt 5452099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 457 - 557
Target Start/End: Original strand, 22604602 - 22604702
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||| |||||| |||||||| ||||||||||| |||| |||||  |||||||||||||||| ||||||  |||||||||||||||  ||||||||||||    
T  22604602 cactcatttattggataaaattaatgtatgtcccaccattttgtgggagttcaattttcaaaatgtagactcacaatgatttaaacttataagagagtga 22604701  T
Q  557 g 557  Q
    |    
T  22604702 g 22604702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 421 - 558
Target Start/End: Complemental strand, 55452187 - 55452052
Alignment:
Q  421 tagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 520  Q
    ||||||||||||||||| |||||||||| ||| |  |||||||||||| |||  |||  |||||||||| ||||||||||  | |||| |||| ||||||    
T  55452187 tagcaacactcacttttgaacactctctggtact--cactcttttattggatggaatacatgtatgtcccaccactttgtgtgggttctatttccaaagt 55452090  T
Q  521 gtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||  || |||||||||||||||| | |||||||||    
T  55452089 gtagactcataatgatttaaaccaatgaaagagtgagt 55452052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 463 - 548
Target Start/End: Complemental strand, 19345132 - 19345047
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||||| ||| |||||||||||||||| ||||||||||  | |||||||||||||| ||||||  |||||||||||||||||||||    
T  19345132 tttattggatgaaatcaatgtatgtcccaccactttgttggggttcaattttcaaattgtagactcacaatgatttaaaccaataa 19345047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 422 - 558
Target Start/End: Complemental strand, 50156831 - 50156697
Alignment:
Q  422 agcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 521  Q
    |||||||||||||||||||||| ||||  || ||||  |  ||||||  || |||| ||||||||| | || ||||||   | |||||||||| ||||||    
T  50156831 agcaacactcacttttcaacacactctgatacttac--ttatttattgaatgaaattaatgtatgttccacaactttgcgggggttcaattttaaaagtg 50156734  T
Q  522 tagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||| ||||||||||||||||||||||||||||||||    
T  50156733 tagacccacaatgatttaaaccaataagagagtgagt 50156697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 551
Target Start/End: Original strand, 29755500 - 29755636
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||||||||||||||||||||||| |||||   |    |||||||||||   ||| ||||||| |||||   || |||||||  | ||||||||||    
T  29755500 gaatgctagcaacactcacttttcaacattctctttaacacccactcttttatcgaatagaatcaatatatgtttcactactttgtgtgggttcaatttt 29755599  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagag 551  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29755600 caaagtgtagatcaacaatgatttaaaccaataagag 29755636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 558
Target Start/End: Complemental strand, 52124077 - 52123993
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||| ||||||||||| || | |||||  | ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  52124077 aaattaatgtatgtcccactattttgtgggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagaaagtgagt 52123993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 14236061 - 14236162
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| |||||||| ||||||| |||||||| |  |||||| |||| ||||||||||||||||||| ||||| |||||||| | |||||    
T  14236061 cactattttattggatgaaatcaatatatgtcccaccactttatgcgagttctatttccaaagtgtagatccacaataatttagaccaataaaaaagtga 14236160  T
Q  557 gt 558  Q
    ||    
T  14236161 gt 14236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 458 - 546
Target Start/End: Complemental strand, 26310583 - 26310495
Alignment:
Q  458 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaat 546  Q
    ||||||||||| ||| |||||||||||||||| |||| ||| |    ||||||||||||||||||||| ||| ||||||||||||||||    
T  26310583 actcttttattggatgaaatcaatgtatgtcccaccattttttgttggttcaattttcaaagtgtagacccataatgatttaaaccaat 26310495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 479 - 566
Target Start/End: Complemental strand, 10948676 - 10948589
Alignment:
Q  479 aatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    ||||||||| | ||||||||||    |||||||||| |||||||| | |||||||||||||||||||||| ||||||||| |||||||    
T  10948676 aatgtatgttccaccactttgtgtttgttcaatttttaaagtgtaaacccacaatgatttaaaccaataaaagagtgagtattaaaga 10948589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 420 - 558
Target Start/End: Original strand, 27243050 - 27243189
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    |||||||||||| ||||| ||||||||||   |    |||||||||||| ||||||||||||| |||||| |||||||| |  | |||| |||| |||||    
T  27243050 ctagcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaag 27243149  T
Q  520 tgta-gatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||| || ||||| |||||||| ||||| |||||||||||    
T  27243150 tgtatgacccacattgatttaacccaatgagagagtgagt 27243189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 496 - 558
Target Start/End: Complemental strand, 24429124 - 24429062
Alignment:
Q  496 tttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||||||| | |||||||    
T  24429124 tttgtgagggttcaatttttaaagtgtagatccacaatgatttaaaccaataaaatagtgagt 24429062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 776 - 848
Target Start/End: Original strand, 50056893 - 50056966
Alignment:
Q  776 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtt-agttttcacgtggcatcagagc 848  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||| || ||||||||| ||| ||||||||    
T  50056893 tatataaacacattagtggttgtacattatttatctctgaaatataatattcagttttcacatggtatcagagc 50056966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 413 - 523
Target Start/End: Original strand, 30624631 - 30624739
Alignment:
Q  413 atgaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||||| |||||||||||||||||| | |||||||||  | |  ||||||||||||  ||||||| |||||||||   ||||||||||  ||||||||||    
T  30624631 atgaatgctagcaacactcacttttgagcactctctaacact--cactcttttattgaataaaattaatgtatgtttcaccactttgtgtgagttcaatt 30624728  T
Q  513 ttcaaagtgta 523  Q
    |||||| ||||    
T  30624729 ttcaaaatgta 30624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 513 - 564
Target Start/End: Complemental strand, 38138664 - 38138613
Alignment:
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaa 564  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  38138664 ttcaaagtatagatccacaatgatttaaaccaataagagagtaagtattaaa 38138613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 420 - 558
Target Start/End: Original strand, 41387568 - 41387704
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||||||||| | ||||||||||||||| | |  ||||| |||||| ||| ||||| |||||| ||  || | |||||  | ||| |||||||||||    
T  41387568 ctagcaacactcattattcaacactctctagcact--cactcatttattggattaaatcgatgtatatcacactattttgtgtgggtttaattttcaaag 41387665  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    || ||| |||||||||||||| | ||||||||| |||||    
T  41387666 tgcagacccacaatgatttaatcaaataagagattgagt 41387704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 49072064 - 49072138
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||| ||| ||||||  ||||||||||| |||||  |||||||||||||||| ||||||| ||||||||||||||    
T  49072064 aaattaatttatgtctcaccactttgtatgagttatattttcaaagtgtagacccacaataatttaaaccaataa 49072138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 428 - 566
Target Start/End: Original strand, 138778 - 138914
Alignment:
Q  428 actcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatc 527  Q
    ||||| ||||||| ||||||||| | |  ||||||||||||  || |||||||||||||||  |||| |||||| |  ||||||||| ||| |||| |      
T  138778 actcagttttcaagactctctagcact--cactcttttattgaatgaaatcaatgtatgtctcaccattttgtatgtattcaatttttaaaatgtaaact 138875  T
Q  528 cacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
     ||||||||||||| |||||| ||||| ||| |||||||    
T  138876 tacaatgatttaaatcaataaaagagtaagtattaaaga 138914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 532
Target Start/End: Complemental strand, 7419316 - 7419241
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaa 532  Q
    ||||||||||||||||||||| ||| |||||||  | | |||||  |||||| |||| ||||||||||||||||||    
T  7419316 cactcttttattagataaaataaatatatgtccctctattttgtgtgagttctatttccaaagtgtagatccacaa 7419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 558
Target Start/End: Complemental strand, 15790501 - 15790407
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||| |||||||||||||||||||  |||| ||| |    |  |||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  15790501 tttattggataaaatcaatgtatgtctcaccattttatggtgggacaattttcaaagtgtagg-ccataatgatttaaaccaataagagagtgagt 15790407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 504 - 547
Target Start/End: Complemental strand, 22856325 - 22856282
Alignment:
Q  504 agttcaattttcaaagtgtagatccacaatgatttaaaccaata 547  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  22856325 agtttaattttcaaagtgtagatccacaattatttaaaccaata 22856282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 558
Target Start/End: Original strand, 44844026 - 44844125
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||  ||||||| ||||||||||| |||| ||  |  |||||||||||| |||||||| || |||||||||||||| ||||||| | |||||||    
T  44844026 tcttttattgaataaaataaatgtatgtcccaccatttcatgtgagttcaatttttaaagtgtatgacccacaatgatttaatccaataaaaaagtgagt 44844125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 458 - 548
Target Start/End: Complemental strand, 50661659 - 50661568
Alignment:
Q  458 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataa 548  Q
    ||||||||||||||||||||||||| |||||| |||||||| |  | |||| |||| |||| |||| || ||||| |||||||| |||||||    
T  50661659 actcttttattagataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaaatgtatgacccacattgatttaacccaataa 50661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 558
Target Start/End: Original strand, 752461 - 752535
Alignment:
Q  484 atgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||| ||||||||||  | |||| ||||  |||||||||| |||||||||||||||| ||||||||| |||||    
T  752461 atgtcccaccactttgtgtgggttctatttctaaagtgtagacccacaatgatttaaactaataagagaatgagt 752535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 776 - 863
Target Start/End: Complemental strand, 28096039 - 28095952
Alignment:
Q  776 tatataaacacattagtagttgtgcatt-ttttatctctgaaatataat-gttagttttcacgtggcatcagagctcctgatcttggggg 863  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||||||||  || |||||||| ||||||  ||||||| |||||||||||    
T  28096039 tatataaacacattagtggttgtaaattattttatctctgaaatataatattttgttttcacatggcat--gagctcccgatcttggggg 28095952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 555
Target Start/End: Complemental strand, 29388684 - 29388634
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||    
T  29388684 gttcaattttcaaagtgtagactcacaatgatttaagtcaataagagagtg 29388634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 553
Target Start/End: Original strand, 39186028 - 39186102
Alignment:
Q  479 aatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagag 553  Q
    ||||||||||  |||||||| |  |||||| |||| |||||||||||||  |||||||||||| |||||||||||    
T  39186028 aatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaatcaataagagag 39186102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 558
Target Start/End: Original strand, 43016502 - 43016556
Alignment:
Q  504 agttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||| ||||| ||||| || ||||||||||| ||||||||||||||||    
T  43016502 agttcaatttttaaagtatagattcataatgatttaaatcaataagagagtgagt 43016556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 841 - 887
Target Start/End: Original strand, 50057279 - 50057325
Alignment:
Q  841 atcagagctcctgatcttggggggtcttgtttccgcataaaccctag 887  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  50057279 atcagagctcccgatcttggggggtgttgcttccgcataaaccctag 50057325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 420 - 552
Target Start/End: Original strand, 13809087 - 13809219
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    |||||||||||| |||||  |||||||||   | || |||||||||||| |||||||||||||||||||| |||| ||| |  | |||| |||| |||||    
T  13809087 ctagcaacactctcttttacacactctctctaactt-cactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaag 13809185  T
Q  520 tgta-gatccacaatgatttaaaccaataagaga 552  Q
    | || || ||||| || ||||| |||||||||||    
T  13809186 tatatgacccacattgttttaacccaataagaga 13809219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 426 - 544
Target Start/End: Complemental strand, 40702289 - 40702173
Alignment:
Q  426 acactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga 525  Q
    ||||||||||||||||||||||||| | ||  ||||||||||  ||| |||| ||||||||  | | |||||| |  | |||||||||| ||||| | ||    
T  40702289 acactcacttttcaacactctctagcactt--actcttttatatgatgaaattaatgtatgatccatcactttatgtgggttcaatttttaaagttttga 40702192  T
Q  526 tccacaatgatttaaacca 544  Q
    |||||| | ||||||||||    
T  40702191 tccacagtaatttaaacca 40702173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 544
Target Start/End: Complemental strand, 41707577 - 41707490
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaacca 544  Q
    |||||| | ||| ||||||||||||||||||   | ||||||||  | |||||||||| ||||| |||| ||||||| ||||||||||    
T  41707577 cactctctcattggataaaatcaatgtatgtttcatcactttgtgtgggttcaatttttaaagtatagacccacaataatttaaacca 41707490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 524
Target Start/End: Complemental strand, 43657134 - 43657067
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| ||||||||||    
T  43657134 cactattttatttgatgaaatcaatgtatgtcccaccactttatgtgagttccatttccaaagtgtag 43657067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 776 - 823
Target Start/End: Original strand, 50061382 - 50061429
Alignment:
Q  776 tatataaacacattagtagttgtgcattttttatctctgaaatataat 823  Q
    ||||||||||||||||| ||| | |||| |||||||||||||||||||    
T  50061382 tatataaacacattagtcgttctacattatttatctctgaaatataat 50061429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 742057 - 742099
Alignment:
Q  516 aaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  742057 aaagtgtagacccacaatgatttaaactaataagagaatgagt 742099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 421 - 578
Target Start/End: Complemental strand, 40716036 - 40715879
Alignment:
Q  421 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 518  Q
    ||||||||||||||||||||||||||||  || | |  |||||||||||  | | |||| |||||||| |  | ||||||||  | |||||||||| |||    
T  40716036 tagcaacactcacttttcaacactctctctagcact--cactcttttatatggtgaaattaatgtatgactcatcactttgtgtgggttcaatttttaaa 40715939  T
Q  519 gtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
     ||| ||   |||||||||||||| |||| |||| ||| | ||||| || ||||||||||    
T  40715938 atgttgacatacaatgatttaaactaataggagattgaatattaaaaaatatgtttaaaa 40715879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 548
Target Start/End: Original strand, 41607499 - 41607544
Alignment:
Q  503 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||| ||||||||||||||||||||||| | ||||||| ||||||    
T  41607499 gagtttaattttcaaagtgtagatccacagttatttaaatcaataa 41607544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 542
Target Start/End: Original strand, 42340873 - 42340958
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaac 542  Q
    |||||||||||||||  | || |||| |||||  |||||||||||   | | ||||||||||||| ||| ||||||||||||||||    
T  42340873 cactcttttattagaagatataaatgcatgtctcaccactttgtattggcttaattttcaaagtgcagacccacaatgatttaaac 42340958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 46237184 - 46237143
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccacttt 498  Q
    |||||||||||| ||| |||||||||||||||| ||||||||    
T  46237184 cactcttttattggatgaaatcaatgtatgtcccaccacttt 46237143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 2e-36; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 420 - 558
Target Start/End: Original strand, 34905341 - 34905479
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||||||||| |||||||||||||||   |    |||||||||||| ||| |||||||||||||||| ||||||||||  | |||||||||||||||    
T  34905341 ctagcaacactcatttttcaacactctctctaacactcactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaag 34905440  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  34905441 tgtagacccacaatgatttaaaccaataagagagtgagt 34905479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 463 - 555
Target Start/End: Complemental strand, 16852105 - 16852013
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||||||| |||| ||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16852105 tttattagatgaaataaatgtatgtcccaccactttgtaggggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtg 16852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 425 - 565
Target Start/End: Complemental strand, 10133328 - 10133188
Alignment:
Q  425 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    ||||||||||||||||||||||||   |    ||||| |||||| ||| |||| | ||||||||| |||||||| |  | ||||||||||||||||||||    
T  10133328 aacactcacttttcaacactctctctaacactcactcatttattggatgaaattattgtatgtcccaccactttatgggggttcaattttcaaagtgtag 10133229  T
Q  525 atccacaatgatttaaaccaataagagagtgagttttaaag 565  Q
    | |||||||||||||||||||||| ||||||||| ||||||    
T  10133228 aaccacaatgatttaaaccaataaaagagtgagtattaaag 10133188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 445818 - 445961
Alignment:
Q  415 gaatactagcaacactcacttttcaacact--ctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| ||||||| ||||| |||||||||||  |||||| | |  |||| ||||||| ||| |||||||||||||||  ||||||||||  | ||||||||    
T  445818 gaatgctagcaatactcatttttcaacactatctctagcact--cacttttttattggatgaaatcaatgtatgtcacaccactttgtgtgggttcaatt 445915  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||| ||||  ||||||||||||||||||||||||| |||||    
T  445916 ttcaaagtctagagtcacaatgatttaaaccaataagagaatgagt 445961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 457 - 556
Target Start/End: Original strand, 5106340 - 5106439
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| |||||||||||||||||||| ||||||||||  | | ||||||||||||||||| | |||||| ||||||||||||||| |||||||    
T  5106340 cacttttttattggataaaatcaatgtatgtcccaccactttgtgtgggatcaattttcaaagtgtacacccacaaggatttaaaccaataatagagtga 5106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 423 - 558
Target Start/End: Complemental strand, 31116296 - 31116161
Alignment:
Q  423 gcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgt 522  Q
    ||||||||||||||| ||||||||||   |  | ||||||| |||| ||| |||||||||||||||| || |||||||  | |||| |||| ||| ||||    
T  31116296 gcaacactcacttttgaacactctctctaacattcactcttctattggatgaaatcaatgtatgtcccactactttgtgtgtgttctatttccaatgtgt 31116197  T
Q  523 agatccacaatgatttaaaccaataagagagtgagt 558  Q
    | | ||||||||||||||||||||||||||||||||    
T  31116196 aaacccacaatgatttaaaccaataagagagtgagt 31116161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 21987334 - 21987435
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| |||||||||||| ||| |||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||| |||||    
T  21987334 cactattttattggatgaaatcaatgtatatcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataagaaagtga 21987433  T
Q  557 gt 558  Q
    ||    
T  21987434 gt 21987435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 425 - 558
Target Start/End: Original strand, 1392640 - 1392770
Alignment:
Q  425 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    ||||||||||||| |||||||||||| | |  |  | ||||||| ||| |||||||||||||||  || |||||||| | |||||||||| ||| |||||    
T  1392640 aacactcactttttaacactctctagcact--ctattttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtag 1392737  T
Q  525 atccacaatgatttaaaccaataagagagtgagt 558  Q
      ||||||||||||||||||||||||||||||||    
T  1392738 c-ccacaatgatttaaaccaataagagagtgagt 1392770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 463 - 548
Target Start/End: Original strand, 32122843 - 32122928
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||||| ||| |||||||| ||||||| |||| |||||  ||||||||||||||||||||||| |||||||||||||| |||||||    
T  32122843 tttattggatgaaatcaatatatgtcccaccattttgtgggagttcaattttcaaagtgtagacccacaatgatttaagccaataa 32122928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 578
Target Start/End: Complemental strand, 32599086 - 32598965
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| |||  |||  ||||||||||  |||||||||  | || | |||| |||||||||||| |||||||||||||| |||||| |||||||    
T  32599086 cactcttttattggatggaatacatgtatgtcccgccactttgtgtgggtgctatttccaaagtgtagattcacaatgatttaaatcaataaaagagtga 32598987  T
Q  557 gttttaaagaaaatgtttaaaa 578  Q
    || ||||||| |||||||||||    
T  32598986 gtattaaagagaatgtttaaaa 32598965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 462 - 578
Target Start/End: Complemental strand, 32112850 - 32112734
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 561  Q
    ||||||| ||| ||||||||| |||||  |||| |||||  | |||  |||||||||||||||||||||||||||||||| |||||||||||||| | ||    
T  32112850 ttttattggatgaaatcaatgcatgtcacaccattttgtgtgggttttattttcaaagtgtagatccacaatgatttaaaacaataagagagtgaatatt 32112751  T
Q  562 aaagaaaatgtttaaaa 578  Q
    | ||| |||||| ||||    
T  32112750 agagagaatgttcaaaa 32112734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 462 - 549
Target Start/End: Complemental strand, 12780892 - 12780805
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 549  Q
    ||||||||| |  ||||||||||||||  || |||||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  12780892 ttttattaggtggaatcaatgtatgtctcactactttgtgttggttcaattttcaaagtgtagatccacaatgatttaaaccaataag 12780805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 475 - 552
Target Start/End: Complemental strand, 12785059 - 12784982
Alignment:
Q  475 aatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 552  Q
    ||||||||||||||  || ||||| |   |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12785059 aatcaatgtatgtcttactactttatgttagttcaattttcaaagtgtagatccataatgatttaaaccaataagaga 12784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 2675937 - 2676038
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||||||||  || || ||||||||||||| ||||||||||    ||| |||||||||| |||||| |||||||| ||||||||||||| | |||||    
T  2675937 cactcttttattgaatgaattcaatgtatgtcccaccactttgtttaggtttaattttcaaaatgtagacccacaatggtttaaaccaataaaaaagtga 2676036  T
Q  557 gt 558  Q
    ||    
T  2676037 gt 2676038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 558
Target Start/End: Complemental strand, 16187523 - 16187469
Alignment:
Q  504 agttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||    
T  16187523 agttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagt 16187469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 558
Target Start/End: Complemental strand, 16187741 - 16187687
Alignment:
Q  504 agttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||    
T  16187741 agttcaattttcaaagtgtagacctacaattatttaaaccaataagcgagtgagt 16187687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 420 - 548
Target Start/End: Complemental strand, 35128898 - 35128769
Alignment:
Q  420 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 517  Q
    |||||||||||| ||||| ||||||||||  || | |  |||||||||||| | |||||||||||||||||| |||||||| |  | |||| ||||||||    
T  35128898 ctagcaacactctcttttgaacactctctctagcagt--cactcttttattgggtaaaatcaatgtatgtcccaccactttatgtgggttccattttcaa 35128801  T
Q  518 agtgtagatcc-acaatgatttaaaccaataa 548  Q
    ||||||| ||| ||| |||||| | |||||||    
T  35128800 agtgtaggtcctacattgatttcacccaataa 35128769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 19090353 - 19090251
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| ||| || ||||||||| ||||||    
T  19090353 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgaattcaaccaataaaagagtg 19090254  T
Q  556 agt 558  Q
    |||    
T  19090253 agt 19090251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 566
Target Start/End: Complemental strand, 17144757 - 17144700
Alignment:
Q  509 aattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    ||||||||||||||||| |||||||||||||||| |||||  |||| ||| |||||||    
T  17144757 aattttcaaagtgtagacccacaatgatttaaactaataaaggagtaagtattaaaga 17144700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 558
Target Start/End: Complemental strand, 34882300 - 34882267
Alignment:
Q  525 atccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||||||||||||||||||||||||    
T  34882300 atccacaatgatttaaaccaataagagagtgagt 34882267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 12753940 - 12753797
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 513  Q
    |||| |||||||||||||||||| |||||||| || ||   | |||||||| ||| ||||||||  ||| |||||| ||||||||||  | |||| ||||    
T  12753940 gaatgctagcaacactcacttttgaacactcttta-tagcaatcactctttcattggataaaatacatgcatgtcccaccactttgtgtgggttctattt 12753842  T
Q  514 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||  ||||| |  ||||||||||||||| ||||| |||| ||||    
T  12753841 tcagggtgtacactcacaatgatttaaactaataaaagagcgagt 12753797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 558
Target Start/End: Complemental strand, 8441941 - 8441886
Alignment:
Q  503 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||||||||||||| |  |||| || ||||||||||| |||||||||    
T  8441941 gagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagt 8441886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 558
Target Start/End: Complemental strand, 8450745 - 8450690
Alignment:
Q  503 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||||||||||||| |  |||| || ||||||||||| |||||||||    
T  8450745 gagttcaattttcaaagtgtagaccttcaataatctaaaccaataaaagagtgagt 8450690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 12753758 - 12753791
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct 448  Q
    ||||||||||||||||| ||||||||||||||||    
T  12753758 gaatactagcaacactctcttttcaacactctct 12753791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 2e-36; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 205 - 392
Target Start/End: Complemental strand, 2816752 - 2816572
Alignment:
Q  205 aataaatatgatcataatatctttgaaagagtatacatgatccaaatagttaaatcatctacttttgcttccaaaggatttgaattgttgcaatgaccgt 304  Q
    |||||||| ||||| ||||||||||||||||  |   | |||||| ||||||||||||  ||||||||||||| ||||||||||||||||| ||||        
T  2816752 aataaatacgatcacaatatctttgaaagagagtg--tcatccaagtagttaaatcatacacttttgcttccagaggatttgaattgttgctatga---a 2816658  T
Q  305 ttcttcttcactgtatgagcactacaataattagaaatcttaaagcattgaatatgcaaaacttggaccaagaaagatcaaagatcca 392  Q
    ||||||||||||||||||||| |||||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  2816657 ttcttcttcactgtatgagcattacaataattag-aatc-tcaagtattgaatatgcaaaacttggaccaacaaagatcaaagctcca 2816572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 2816966 - 2816830
Alignment:
Q  8 agttaatatgtttcattcttggagctggatccctcattgcactaaacaacttgtggacaat----gggagattactactaccaagtgttccctgtaagaa 103  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    ||||||||||||||||| |||||||||||||||||    
T  2816966 agtttatatgtttcattcttggagttggatccctcattgccctaaacaacatgtggacaatatatgggagattactactacctagtgttccctgtaagaa 2816867  T
Q  104 tctcatcatttcaaaaactatatatgaaccatctttcattc 144  Q
    |||| | |||||||||||    |||||||||||||||||||    
T  2816866 tctcttgatttcaaaaac----tatgaaccatctttcattc 2816830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 457 - 578
Target Start/End: Original strand, 44274276 - 44274397
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  44274276 cactctttcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaactttcaaagtgtagatccacaatgatttaaaccaataacagagtga 44274375  T
Q  557 gttttaaagaaaatgtttaaaa 578  Q
    || ||| ||| ||| |||||||    
T  44274376 gtgttagagagaatatttaaaa 44274397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 457 - 556
Target Start/End: Original strand, 9470123 - 9470222
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||  | ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9470123 cactcttttattggatgaaatcaatgtatgtcccaccactttgtttgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagtga 9470222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 26767941 - 26767798
Alignment:
Q  415 gaatactagcaacactcacttttcaaca--ctctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||||||||||||||||||||||  |||||||| | ||||  ||||||| | ||| |||||||||||||||| |||||||||| || ||||||||    
T  26767941 gaatgctagcaacactcacttttcaacattctctctagcacttac--tcttttactggatgaaatcaatgtatgtcccaccactttgtgagggttcaatt 26767844  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||| ||||||  ||||||||||||||||||||| |||||||||    
T  26767843 ttcaaattgtagactcacaatgatttaaaccaataaaagagtgagt 26767798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 420 - 578
Target Start/End: Complemental strand, 6980295 - 6980137
Alignment:
Q  420 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 517  Q
    ||||||||| |||||||||||||||||||  || | |  |||||||||||| ||| ||||||| |||||| | ||||||||||  |||||||||||||||    
T  6980295 ctagcaacattcacttttcaacactctctctagcact--cactcttttattggatgaaatcaaggtatgttctaccactttgtgtgagttcaattttcaa 6980198  T
Q  518 agtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    ||| |||| |||||||||||| ||| ||||||||||||||| ||| ||||| |||| ||||    
T  6980197 agtatagacccacaatgatttcaactaataagagagtgagtattagagaaagtgttcaaaa 6980137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 12989191 - 12989334
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||||||||||||||        |||||||| ||| ||| |||||||||||||||| ||||||||||| |  ||| ||||     
T  12989191 gaatgctagcaacactcacttttcaacactctctttctcactcactctttcattggatgaaatcaatgtatgtcccaccactttgtatggattctatttc 12989290  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    | ||||||||| ||||||||||||||||||||||||||||||||    
T  12989291 cgaagtgtagacccacaatgatttaaaccaataagagagtgagt 12989334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 415 - 578
Target Start/End: Original strand, 45554567 - 45554722
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||||||||||||||||||||||||||||  || | |  |||||||||||| ||| |||||||||||||||| |||||||||        |||||    
T  45554567 gaatgctagcaacactcacttttcaacactctctctagcact--cactcttttattggatgaaatcaatgtatgtcccaccactttg--------caatt 45554656  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    ||| ||||||||| |||||||||||||||||||||||| ||||||| ||| ||| |||||| ||||    
T  45554657 ttccaagtgtagacccacaatgatttaaaccaataagaaagtgagtattagagagaatgttcaaaa 45554722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 462 - 578
Target Start/End: Complemental strand, 25238411 - 25238294
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactt-tgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttt 560  Q
    |||||||||||||||||||||||||||  | ||||| | |  | |||| ||||||||||||||||||||||||||||||||||||||| | |||||||      
T  25238411 ttttattagataaaatcaatgtatgtctcatcacttctttgtgggttctattttcaaagtgtagatccacaatgatttaaaccaataaaaaagtgagtgc 25238312  T
Q  561 taaagaaaatgtttaaaa 578  Q
    || ||||| |||||||||    
T  25238311 tagagaaagtgtttaaaa 25238294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 421 - 570
Target Start/End: Complemental strand, 34142313 - 34142164
Alignment:
Q  421 tagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 520  Q
    |||||||||| ||||||||||| |||||   |  | |||| ||||||| ||| ||||  |||||||||  || |||||||  | ||||||||||||||||    
T  34142313 tagcaacacttacttttcaacaatctctcaaacattcacttttttattggatgaaattcatgtatgtctcactactttgtgtgggttcaattttcaaagt 34142214  T
Q  521 gtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaat 570  Q
    |||||  ||||||| ||||||||||||||||||||| | |||||||||||    
T  34142213 gtagagtcacaatggtttaaaccaataagagagtgaatattaaagaaaat 34142164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 7919382 - 7919311
Alignment:
Q  483 tatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    ||||||| ||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7919382 tatgtcccaccactttgtgtggattcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 7919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 556
Target Start/End: Original strand, 19639135 - 19639234
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||||||| |||||||||||||||  | ||| | ||  ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  19639135 cactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtga 19639234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 556
Target Start/End: Original strand, 19837728 - 19837827
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||||||| |||||||||||||||  | ||| | ||  ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  19837728 cactattttattagatgaaatcaatgtatgtctcatcacatagtgtgagttcaattttcaaagtgcagacctacaatgatttaaaccaataagagagtga 19837827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 425 - 558
Target Start/End: Complemental strand, 35316569 - 35316438
Alignment:
Q  425 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    |||||| | ||||||||| |||||| || |  ||||||||||||||||||||| ||||||||||| |||| ||| |     ||||||||| ||| |||||    
T  35316569 aacacttatttttcaacattctctattact--cactcttttattagataaaattaatgtatgtcccaccattttatgttgattcaatttttaaattgtag 35316472  T
Q  525 atccacaatgatttaaaccaataagagagtgagt 558  Q
    | ||||||||||||||| ||||||||||||||||    
T  35316471 acccacaatgatttaaatcaataagagagtgagt 35316438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 425 - 525
Target Start/End: Original strand, 2476546 - 2476644
Alignment:
Q  425 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    |||||||||||||||||| ||||||| | ||||  |||||||||||||||||||||||||||||| || |||||||   | ||||||||||||| |||||    
T  2476546 aacactcacttttcaacattctctagcacttac--tcttttattagataaaatcaatgtatgtcccactactttgtgtaacttcaattttcaaaatgtag 2476643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 11539465 - 11539569
Alignment:
Q  457 cactcttttattagataaaatcaat--gtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaa-tgatttaaaccaataagagag 553  Q
    |||||||||||| ||| ||||||||  |||||| | | ||||||||  |||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  11539465 cactcttttattggatgaaatcaatatgtatgttccatcactttgtgtgagttctattttcaaagtgtagatccagaattgatttaaaccaataagagag 11539564  T
Q  554 tgagt 558  Q
    |||||    
T  11539565 tgagt 11539569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 462 - 566
Target Start/End: Complemental strand, 12099000 - 12098895
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccac-aatgatttaaaccaataagagagtgagttt 560  Q
    ||||||| ||| ||||||| |||||||   |||||||||| ||||||||||||||||||||| |  ||| |||||||||||| ||||||||||||||| |    
T  12099000 ttttatttgatgaaatcaaagtatgtctcgccactttgtatgagttcaattttcaaagtgtaaactcacaaatgatttaaactaataagagagtgagtat 12098901  T
Q  561 taaaga 566  Q
    ||||||    
T  12098900 taaaga 12098895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 474 - 554
Target Start/End: Original strand, 38464222 - 38464302
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    |||||||||||||||  | |||||||   | ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38464222 aaatcaatgtatgtctcatcactttgcgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagagt 38464302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 479 - 558
Target Start/End: Original strand, 10981582 - 10981661
Alignment:
Q  479 aatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||| ||||||||||  | |||| |||| ||| ||||||| ||||||||||||||||||||||||||||||||    
T  10981582 aatgtatgtcccaccactttgtgtgggttctatttccaatgtgtagacccacaatgatttaaaccaataagagagtgagt 10981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 415 - 549
Target Start/End: Complemental strand, 18511389 - 18511255
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 513  Q
    |||| |||||||||||||||||| ||||||||| | |||    |||||||||||| |||||||||||||||||||| || | ||| |  | |||||||||    
T  18511389 gaatgctagcaacactcactttttaacactctc-actatcactcactcttttattggataaaatcaatgtatgtcccactattttatgtgggttcaattt 18511291  T
Q  514 tcaaagtgtagatccacaatgatttaaaccaataag 549  Q
    |||||||| ||| | |||||| ||||||||||||||    
T  18511290 tcaaagtgaagacctacaatgttttaaaccaataag 18511255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 472264 - 472192
Alignment:
Q  494 actttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    |||||||  |||||||||||||||| | || ||||||||||||||||||||||||||||| |||| |||||||    
T  472264 actttgtgtgagttcaattttcaaaatatatatccacaatgatttaaaccaataagagagcgagtattaaaga 472192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 420 - 578
Target Start/End: Complemental strand, 16719605 - 16719447
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||||||||||||||||||||| |||       | ||||||||||||||| |||||||||||| ||| |||| ||  |    ||||||||||||||     
T  16719605 ctagcaacactcacttttcaacactgtctttagcacatactcttttattagatgaaatcaatgtatatcccaccatttcatgtaggttcaattttcaaaa 16719506  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    |||||| || ||||||||||||||||||  | | ||||| ||||| |||||||| ||||    
T  16719505 tgtagacccgcaatgatttaaaccaatacaaaaatgagtattaaacaaaatgttaaaaa 16719447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 30849284 - 30849386
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 561  Q
    ||||||||||| ||||||||||| |||| |||| |||||| | |||| ||||| ||||  || ||||||||||||||||| |||||||| |||| || ||    
T  30849284 ttttattagatgaaatcaatgtacgtcccaccaatttgtatgggttctatttttaaaggataaatccacaatgatttaaatcaataagaaagtgcgtatt 30849383  T
Q  562 aaa 564  Q
    |||    
T  30849384 aaa 30849386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 458 - 548
Target Start/End: Original strand, 32701513 - 32701603
Alignment:
Q  458 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||||| |||||||||||||||| ||| |||||||| |    |||||||||| || ||||| ||||| ||||||||||||||||||    
T  32701513 actcttttattggataaaatcaatgtatatcccaccactttatgtatgttcaatttttaacgtgtaaatccataatgatttaaaccaataa 32701603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 37652378 - 37652292
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||||| |||||||||||||| | ||| ||||||    ||||||||| ||| |||||||| |||||||||||||||||||||    
T  37652378 ttttattagatgaaatcaatgtatgttccacccctttgtgtatgttcaatttccaacgtgtagattcacaatgatttaaaccaataa 37652292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 424 - 548
Target Start/End: Original strand, 17188076 - 17188198
Alignment:
Q  424 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 523  Q
    |||||||||||||||||| |||||||  | |  |||| ||||||| ||| |||||||||| | ||  ||||||||||  ||  |||||||||||||||||    
T  17188076 caacactcacttttcaactctctctatcact--cactattttattggatgaaatcaatgtgtatctcaccactttgtgtgaactcaattttcaaagtgta 17188173  T
Q  524 gatccacaatgatttaaaccaataa 548  Q
    |  ||| ||||||||||||||||||    
T  17188174 ggcccagaatgatttaaaccaataa 17188198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 32856319 - 32856172
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttac--actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaa 510  Q
    |||| ||| |||||||||||||| ||||||||||  ||||   ||  ||||||||||  ||| |||| ||| |||||   ||||||||||  | ||| ||    
T  32856319 gaatgctaacaacactcacttttgaacactctctccagtacgcactgactcttttatcggatgaaattaatatatgtttcaccactttgtgtgggttgaa 32856220  T
Q  511 ttttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||||||||| | |||||||||||||||||||| |||||    
T  32856219 ttttcaaagtgtagatccatagtgatttaaaccaataagagattgagt 32856172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 425 - 558
Target Start/End: Complemental strand, 36472008 - 36471875
Alignment:
Q  425 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    ||||||||||||||||||||||||   |    || ||| ||||| ||| ||||||| |||||||  |||||||| || |  ||||||||||||| ||||     
T  36472008 aacactcacttttcaacactctctctgacactcaatctcttattggatgaaatcaaagtatgtctcaccactttttatggattcaattttcaaaatgtaa 36471909  T
Q  525 atccacaatgatttaaaccaataagagagtgagt 558  Q
    |  ||||||||||||||||||||| |||||||||    
T  36471908 actcacaatgatttaaaccaataaaagagtgagt 36471875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 510 - 558
Target Start/End: Complemental strand, 4552925 - 4552877
Alignment:
Q  510 attttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  4552925 attttcaatgtgtagacccacaatgatttaaaccaataagagagtgagt 4552877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 508 - 570
Target Start/End: Complemental strand, 14489626 - 14489564
Alignment:
Q  508 caattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaat 570  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||| ||||| ||| |||||||    
T  14489626 caatttttaaagtgtagatccacaataatttaaaccaataaaagaatgagtattagagaaaat 14489564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 15884498 - 15884564
Alignment:
Q  484 atgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    |||||| ||||||||||  | |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  15884498 atgtcccaccactttgtgtgggttcaattttcaaaatgtagacccacaattatttaaaccaataaga 15884564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 462 - 558
Target Start/End: Original strand, 43414402 - 43414498
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| ||| |||||||||||||| | |||| ||||    ||| | ||||||| ||| |||||||||||||||||||||||| ||||| ||||||    
T  43414402 ttttattggatgaaatcaatgtatgttctaccattttgcgtaagtgctattttcagagtatagatccacaatgatttaaaccaagaagagggtgagt 43414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 781 - 883
Target Start/End: Complemental strand, 25476432 - 25476329
Alignment:
Q  781 aaacacattagtagttgtgcattttttatctctgaaatataatgtt-agttttcacgtggcatcagagctcctgatcttggggggtcttgtttccgcata 879  Q
    |||||||||||| |||||  ||| ||||||| ||||||||||| || ||||||||| ||||||||||||||  ||||    |||| |||| |||||||||    
T  25476432 aaacacattagtggttgtaaattatttatctttgaaatataatcttcagttttcacatggcatcagagctctcgatcactaggggccttgcttccgcata 25476333  T
Q  880 aacc 883  Q
    ||||    
T  25476332 aacc 25476329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 28898175 - 28898073
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||  |||| |||||||||||||| ||| |||||| | ||||||| ||||||    
T  28898175 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaagtgtagatcctacattgatttcatccaataaaagagtg 28898076  T
Q  556 agt 558  Q
    |||    
T  28898075 agt 28898073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 776 - 848
Target Start/End: Original strand, 17508848 - 17508921
Alignment:
Q  776 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtt-agttttcacgtggcatcagagc 848  Q
    ||||||||||||||||| ||||| |||| ||||| ||||||||||||| || | ||||||| ||| ||||||||    
T  17508848 tatataaacacattagtggttgtacattatttatttctgaaatataatattcaattttcacatggtatcagagc 17508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 41805914 - 41805873
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccacttt 498  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  41805914 cactcttttattggataaaatcaatgtatgtcccaccacttt 41805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 420 - 558
Target Start/End: Complemental strand, 24895440 - 24895303
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    |||||||||||| |||||  ||| |||||| || |  |||||||||| | |||||||||||||||| | | |||| ||| |  |||||| |||| |||||    
T  24895440 ctagcaacactctcttttggacagtctctaatact--cactcttttaatggataaaatcaatgtatattccaccattttatgtgagttccatttccaaag 24895343  T
Q  520 tgta-gatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||| || ||||| |||||||| ||||| | |||||||||    
T  24895342 tgtatgacccacattgatttaacccaatgaaagagtgagt 24895303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 528 - 578
Target Start/End: Complemental strand, 25730506 - 25730456
Alignment:
Q  528 cacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    |||| |||||||||||||||| ||||||| | ||||| |||||||||||||    
T  25730506 cacagtgatttaaaccaataaaagagtgaatattaaaaaaaatgtttaaaa 25730456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 510 - 548
Target Start/End: Complemental strand, 30718412 - 30718374
Alignment:
Q  510 attttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  30718412 attttcaaagtgtagactcacaatgatttaaaccaataa 30718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 42182931 - 42183029
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagt 554  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| |||||    
T  42182931 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagt 42183029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 458 - 578
Target Start/End: Original strand, 39471200 - 39471320
Alignment:
Q  458 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 557  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  39471200 actcttttattagatgaaatcaatgtatgtcccaccactttgtgttggttcaatcttcaaagtgtagacccacaatgatttaaaccaataagagagtgag 39471299  T
Q  558 ttttaaagaaaatgtttaaaa 578  Q
    | ||| ||| |||||||||||    
T  39471300 tattagagagaatgtttaaaa 39471320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 421 - 566
Target Start/End: Original strand, 43771132 - 43771277
Alignment:
Q  421 tagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||||||||||||| ||||||||||  |||    |||||||||||| ||| |||||||||||||||| |||||| |||  | |||||||||||||||    
T  43771132 tagcaacactcacttttgaacactctctc-tatgactcactcttttattggatgaaatcaatgtatgtcccaccactctgtgtgggttcaattttcaaag 43771230  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||    
T  43771231 tgtagacccacaatgatttaaaccaataagagagtgagtattaaaga 43771277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 418 - 558
Target Start/End: Original strand, 20454543 - 20454681
Alignment:
Q  418 tactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttc 515  Q
    ||||||||||||| |||||||||||||||||  || | |  ||||||||||||||||||||||||||||||||||  ||||||||    |||||||||||    
T  20454543 tactagcaacacttacttttcaacactctctctagcact--cactcttttattagataaaatcaatgtatgtcca--cactttgtgttggttcaattttc 20454638  T
Q  516 aaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  20454639 aaagtgtagatccacaatgatttaaatcaataacagagtgagt 20454681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 424 - 556
Target Start/End: Complemental strand, 10169814 - 10169684
Alignment:
Q  424 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 523  Q
    ||||| |||||||||||||||||||| ||||  |||||| ||||| ||| |||||||| ||||||| ||||||||||  ||||||||||||||||   ||    
T  10169814 caacattcacttttcaacactctctaatatt--cactctattattggatgaaatcaatatatgtcctaccactttgtgtgagttcaattttcaaaacata 10169717  T
Q  524 gatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||| ||||||||||||||||||||||    
T  10169716 gatccacaattatttaaaccaataagagagtga 10169684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 420 - 558
Target Start/End: Original strand, 8108961 - 8109099
Alignment:
Q  420 ctagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaa 517  Q
    |||||||||||||||||||||||||||||  || | |  |||||||||||| | | |||||||||||||||| || | |||||    |||||||||||||    
T  8108961 ctagcaacactcacttttcaacactctctctagcact--cactcttttattgggtgaaatcaatgtatgtcccactaatttgtgtttgttcaattttcaa 8109058  T
Q  518 agtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  8109059 agtgtagacccacaatgatttaaaccaataagaaagtgagt 8109099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 415 - 557
Target Start/End: Original strand, 50164395 - 50164537
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    ||||||||| ||||||||||||| ||||||||||  || | |  ||||| |||||| |||||||||||||||| ||| |||| |||||  | ||||||||    
T  50164395 gaatactagtaacactcactttttaacactctctctagcact--cactcatttattggataaaatcaatgtatctcccaccattttgtgggggttcaatt 50164492  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 557  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||    
T  50164493 ttcaaagtgtagactcacaatgatttaaaccaataagaaagtgag 50164537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 722199 - 722300
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| ||||||| |||||||| ||||||||||   ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  722199 cacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtga 722298  T
Q  557 gt 558  Q
    ||    
T  722299 gt 722300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 47009231 - 47009332
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| |||||||| ||||| ||||  ||| ||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  47009231 cactcttttattggataaaattaatgtttgtctcaccgctttgtgtgagttcaattttcaaagtgtagatacacaatgatttaaaccaataagaaagtga 47009330  T
Q  557 gt 558  Q
    ||    
T  47009331 gt 47009332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 33653669 - 33653526
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 513  Q
    |||| ||||||||||||| |||||||||||||||  |||| | ||||| |||||| ||| |||||||||||||||| |||| |||||  |  ||||||||    
T  33653669 gaatgctagcaacactcagttttcaacactctctc-tattaatcactcatttatttgatgaaatcaatgtatgtcccaccattttgtggggtttcaattt 33653571  T
Q  514 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||| | | ||||||||||||||||||||||||||| |||||||    
T  33653570 tcaaaatattgatccacaatgatttaaaccaataagaaagtgagt 33653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 415 - 551
Target Start/End: Original strand, 49077249 - 49077385
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| ||||||||||||| ||||||||| |||||  || | |  || |||||||||||||||||| ||| ||||||| ||||||||||  | ||||||||    
T  49077249 gaatgctagcaacactcagttttcaacattctctttagcact--cattcttttattagataaaattaatatatgtcccaccactttgtgtgggttcaatt 49077346  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagag 551  Q
    || |||||||||| |||||||||||||||||||||||||    
T  49077347 tttaaagtgtagacccacaatgatttaaaccaataagag 49077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 754718 - 754617
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| || |||| |||||||| ||||||||||   ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  754718 cacttttttattggatgaactcaaagtatgtcccaccactttgtgtaagttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtga 754619  T
Q  557 gt 558  Q
    ||    
T  754618 gt 754617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 415 - 553
Target Start/End: Complemental strand, 20225519 - 20225383
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||| |||||||||||| | |  |||||||||||| |||  |||| ||| |||||| |||||||| |  | |||| ||||     
T  20225519 gaatgctagcaacactcacttttgaacactctctagcact--cactcttttattggatggaatccatgcatgtcccaccactttttgtgggttctatttc 20225422  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagag 553  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  20225421 caaagtgtagactcacaatgatttaaaccaataagagag 20225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 462 - 556
Target Start/End: Original strand, 24834625 - 24834719
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||| |||  ||||||||||||||| |||| |||||  | ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24834625 ttttattggatggaatcaatgtatgtcccaccattttgtgtgggttcaattttcaaagtgtagacccacaataatttaaaccaataagagagtga 24834719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 26361480 - 26361345
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||||||||||||         ||||||||||||| ||| || |||||||||| || |||| |||||  | ||||||| ||    
T  26361480 gaatgctagcaacactcacttttcaacactcta--------acactcttttattggatgaagtcaatgtatgacccaccattttgtgtgggttcaatatt 26361389  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||    
T  26361388 caaagtgtagacccataatgatttaaaccaataagtgagtgagt 26361345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 457 - 578
Target Start/End: Complemental strand, 24938553 - 24938432
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| |||  ||||||||||||||| |||| |||||  |  ||||||||| |||||||||| | |||||||||||||||||||||||||| |    
T  24938553 cactcttttattggatgtaatcaatgtatgtcccaccattttgtttggattcaatttttaaagtgtagacctacaatgatttaaaccaataagagagtaa 24938454  T
Q  557 gttttaaagaaaatgtttaaaa 578  Q
    || ||| ||||| |||| ||||    
T  24938453 gtattagagaaagtgttgaaaa 24938432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 556
Target Start/End: Complemental strand, 50481683 - 50481584
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||| ||||||| |||||||  ||||||||||| |  ||| ||||||||||||||||  |||||| ||||||||||||||||||||||    
T  50481683 cactcttttattggatgaaatcaaagtatgtctcaccactttgtatggtttctattttcaaagtgtagacacacaatcatttaaaccaataagagagtga 50481584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 49242212 - 49242313
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||| ||| ||| |||||||| ||||||| | ||||||||  | ||||||||||||| |||||||| ||||||||||||||||||||||||| |||    
T  49242212 cactttttaattggatgaaatcaatatatgtcccatcactttgtgtgggttcaattttcaatgtgtagattcacaatgatttaaaccaataagagaatga 49242311  T
Q  557 gt 558  Q
    ||    
T  49242312 gt 49242313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 458 - 564
Target Start/End: Original strand, 22542424 - 22542530
Alignment:
Q  458 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 557  Q
    |||||||||||  || ||||||| |||||| | ||||||||||  | |||||||||||||||  |||  |||||||||||||||| ||||||||||||||    
T  22542424 actcttttattgaatgaaatcaaagtatgttccaccactttgtgtgggttcaattttcaaagaatagtcccacaatgatttaaactaataagagagtgag 22542523  T
Q  558 ttttaaa 564  Q
    | |||||    
T  22542524 tattaaa 22542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 425 - 578
Target Start/End: Complemental strand, 19937341 - 19937189
Alignment:
Q  425 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    ||||||||||||| ||  |||||||| ||||| | | ||| ||| |||| ||||||||||||||| |||| | | |  |||||| ||||||||||| |||    
T  19937341 aacactcacttttaaattctctctagcattta-attttttaattggatacaatcaatgtatgtcccaccattatatgtgagttctattttcaaagtatag 19937243  T
Q  525 atccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    ||| ||||||||| ||||||| || ||||||||  ||||||| | |||||||||    
T  19937242 atcgacaatgattcaaaccaacaaaagagtgagaattaaagagagtgtttaaaa 19937189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 34129538 - 34129437
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||| |||| ||| | |||||||||| ||| ||||||||||  | |||||||||||||||||| ||  ||||||| ||||||||||||| |||||||    
T  34129538 cactcttctattggatgagatcaatgtatatcccaccactttgtgtgtgttcaattttcaaagtgtggactcacaatggtttaaaccaataaaagagtga 34129439  T
Q  557 gt 558  Q
    ||    
T  34129438 gt 34129437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 457 - 578
Target Start/End: Original strand, 52671872 - 52671993
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| |||| ||||||||||| |||| ||| |   ||||||||||| |||||||| || | ||||||||||||| ||||||| |||||    
T  52671872 cacttttttattggatgaaataaatgtatgtcccaccattttatgtaagttcaatttttaaagtgtaaattctcaatgatttaaactaataagatagtga 52671971  T
Q  557 gttttaaagaaaatgtttaaaa 578  Q
    || ||||||| | |||||||||    
T  52671972 gtattaaagagagtgtttaaaa 52671993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 457 - 578
Target Start/End: Complemental strand, 37451149 - 37451030
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| |||| |||| |||||  ||  |||| |||||  |||||| ||||||||||||||||  | ||||||||||||||||||| |||||||    
T  37451149 cactcttttattggatagaatccatgtacatcttaccaatttgt--gagttctattttcaaagtgtagactcgcaatgatttaaaccaataaaagagtga 37451052  T
Q  557 gttttaaagaaaatgtttaaaa 578  Q
    || ||| ||||  |||||||||    
T  37451051 gtattagagaaggtgtttaaaa 37451030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 48339478 - 48339380
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||| ||||| ||  |||||||||||||| | ||||||||||  | ||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  48339478 cactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtg 48339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 550
Target Start/End: Original strand, 38636379 - 38636472
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    |||||||||||| |||||||||||||||||||  || ||||| |  | ||  |||||| |||||||||||||||||||||||| | ||||||||    
T  38636379 cactcttttatttgataaaatcaatgtatgtctcactactttatgtgggtctaatttttaaagtgtagatccacaatgatttatatcaataaga 38636472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 31251015 - 31250924
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    |||||| ||| |||||||||||||||| |||| ||| |    |||||||||||||| |||||| ||||||||||||||| |||||| |||||    
T  31251015 tttattggatgaaatcaatgtatgtcccaccattttatggacgttcaattttcaaaatgtagacccacaatgatttaaatcaataaaagagt 31250924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 38537649 - 38537560
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt---caaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||| ||| |||||||||||||||  || |||||||| ||||||||||||   |||||||||||| || ||||||||||| ||||||    
T  38537649 ttttatttgatgaaatcaatgtatgtcttactactttgtatgagttcaattttcaacaaagtgtagattcataatgatttaaatcaataa 38537560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 465 - 554
Target Start/End: Complemental strand, 45311078 - 45310989
Alignment:
Q  465 tattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    |||| ||| |||||||| ||||||| ||||||||||  |  |||||||||||||||| |||   ||||||||||||| ||||||||||||    
T  45311078 tattggatgaaatcaatatatgtcccaccactttgtggggattcaattttcaaagtgaagacttacaatgatttaaatcaataagagagt 45310989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 40991769 - 40991626
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 513  Q
    |||| |||||||||||||||||||||||||||||  |||    |||||||| ||| ||| |||||||| ||||||| ||| | |||||   |  | ||||    
T  40991769 gaatgctagcaacactcacttttcaacactctctc-tatcactcactctttcattggatgaaatcaatatatgtcccaccccattgtattggcactattt 40991671  T
Q  514 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
       ||||||||| |||||||||||||||||||||| |||||||||    
T  40991670 ctgaagtgtagacccacaatgatttaaaccaataaaagagtgagt 40991626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 539
Target Start/End: Complemental strand, 46242113 - 46242000
Alignment:
Q  424 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 523  Q
    |||||||||||||| |||||||||||| | | |||||  |||||  ||| |||||| ||||||||| |||| |||||    |||||||||||||| | ||    
T  46242113 caacactcactttttaacactctctagaactcacact--tttatgggatgaaatcattgtatgtcccaccattttgtgtaggttcaattttcaaaatata 46242016  T
Q  524 gatccacaatgattta 539  Q
    || |||||||||||||    
T  46242015 gacccacaatgattta 46242000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 5044678 - 5044587
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||| ||||||| ||| |||||||| ||||||  || | |||||  |||||||||||| ||| |||||| |||||| |||||||||||||||    
T  5044678 cacttttttattggatgaaatcaatatatgtcacactattttgtgtgagttcaatttttaaaatgtagacccacaacgatttaaaccaataa 5044587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 49682929 - 49682838
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||| ||||||  ||| |||||||||||| ||  |||||||| |  || |||||||||||||||||||| |||||  |||||||||||||||    
T  49682929 cacttttttatcggatgaaatcaatgtatatctcaccactttatttgaattcaattttcaaagtgtagagccacatcgatttaaaccaataa 49682838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 421 - 536
Target Start/End: Original strand, 50571870 - 50571985
Alignment:
Q  421 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 518  Q
    |||||||| |||||||||||||||||||  || | ||||  ||||||||||||| ||||||||||||| || | || ||| |  |  |||||||||||||    
T  50571870 tagcaacagtcacttttcaacactctctctagcacttac--tcttttattagatgaaatcaatgtatgccccatcaatttatgtggcttcaattttcaaa 50571967  T
Q  519 gtgtagatccacaatgat 536  Q
    ||||||| || |||||||    
T  50571968 gtgtagacccgcaatgat 50571985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 512 - 558
Target Start/End: Original strand, 11895134 - 11895180
Alignment:
Q  512 tttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||    
T  11895134 tttcaaagtgtagacccacaatgatttgaacgaataagagagtgagt 11895180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 578
Target Start/End: Original strand, 13069983 - 13070104
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    |||||||||||| | | |||||||||||||| | |||||||| |  | |||| ||||||||||||||| ||| ||| |||||| |  |||||| ||||||    
T  13069983 cactcttttattgg-tgaaatcaatgtatgttccaccactttatgtgggttccattttcaaagtgtaggtcctacattgattttactcaataaaagagtg 13070081  T
Q  556 agttttaaagaaaatgtttaaaa 578  Q
    ||| ||| |||||||||| ||||    
T  13070082 agtgttagagaaaatgttcaaaa 13070104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 578
Target Start/End: Complemental strand, 25719251 - 25719129
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag-atccacaatgatttaaaccaataagagagtg 555  Q
    |||||| ||||| | | |||||||||||||||| |||||||| |  | |||  |||| |||| ||||| | |||||||||||||| ||||| ||||||||    
T  25719251 cactctcttattggttgaaatcaatgtatgtcccaccactttatgtgggtttcatttccaaaatgtaggacccacaatgatttaacccaatcagagagtg 25719152  T
Q  556 agttttaaagaaaatgtttaaaa 578  Q
    ||| ||| ||||| |||| ||||    
T  25719151 agtattagagaaattgttcaaaa 25719129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 51206085 - 51206187
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    ||||| |||||||||| |||||||||||||||| | |||||| |  |||||  ||||||||| ||||| ||| ||| |||||| | ||||||| ||||||    
T  51206085 cactcatttattagatgaaatcaatgtatgtcccatcactttatgtgagtttcattttcaaaatgtaggtcctacattgatttcacccaataaaagagtg 51206184  T
Q  556 agt 558  Q
    |||    
T  51206185 agt 51206187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 550
Target Start/End: Original strand, 13520007 - 13520084
Alignment:
Q  473 aaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    ||||||||||||||| | ||||||||||  | ||||  ||| ||| ||||| | ||||||||||||||||||||||||    
T  13520007 aaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 13520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 548
Target Start/End: Complemental strand, 18421968 - 18421878
Alignment:
Q  456 acactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||| ||||||||||| |||||||||||||||| |||||| |||  | ||| |||||| ||||| |  ||  ||||||||||||||||||||    
T  18421968 acacttttttattagatgaaatcaatgtatgtcccaccactgtgt--gtgtttaatttttaaagtatgtatttacaatgatttaaaccaataa 18421878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 498
Target Start/End: Complemental strand, 21776983 - 21776942
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccacttt 498  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  21776983 cactcttttattggataaaatcaatgtatgtcctaccacttt 21776942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 424 - 545
Target Start/End: Complemental strand, 33996106 - 33995985
Alignment:
Q  424 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 523  Q
    |||||||| ||||||||||| ||||   |  | ||||||||||||| || |||||||||||||||  |||||||| |  | |||||||||||||| | ||    
T  33996106 caacactctcttttcaacacactctctaacattcactcttttattaaatcaaatcaatgtatgtctcaccactttttgtgggttcaattttcaaaattta 33996007  T
Q  524 gatccacaatgatttaaaccaa 545  Q
     |  ||||||| ||||||||||    
T  33996006 aactcacaatggtttaaaccaa 33995985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 524
Target Start/End: Complemental strand, 47237921 - 47237812
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| ||| |||||||| ||||| ||||||||||  || |||  |||||||||||| ||| |||||||| ||||||| |||||||| ||  ||||  |||    
T  47237921 gaatgctatcaacactctcttttgaacactctctctagcatt--cactcttttattggatgaaatcaatatatgtcccaccactttatataagtttcatt 47237824  T
Q  513 ttcaaagtgtag 524  Q
    ||||||||||||    
T  47237823 ttcaaagtgtag 47237812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 835
Target Start/End: Original strand, 11393149 - 11393209
Alignment:
Q  776 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtt-agttttcac 835  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||||||| || |||||||||    
T  11393149 tatataaacacatcagtggttgtacattatttatctctgaaatataatattaagttttcac 11393209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 776 - 835
Target Start/End: Original strand, 11402876 - 11402936
Alignment:
Q  776 tatataaacacattagtagttgtgcattttttatctctgaaatataatgtt-agttttcac 835  Q
    ||||||||||||| ||| ||||| |||| ||||||||||||||||||| || |||||||||    
T  11402876 tatataaacacatcagtggttgtacattatttatctctgaaatataatattaagttttcac 11402936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 528
Target Start/End: Complemental strand, 30867070 - 30866999
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc 528  Q
    |||| ||||||| ||| |||| ||||||||||| |||||||| |  | |||| |||||||||||||||||||    
T  30867070 cacttttttattggattaaattaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcc 30866999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 461 - 556
Target Start/End: Complemental strand, 50652470 - 50652375
Alignment:
Q  461 cttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||||  ||||||||||||||| ||  ||||||||||    |||||||||||||| ||||||   ||||| ||||||| |||||||| |||||    
T  50652470 cttttattgcataaaatcaatgtatatctcaccactttgtgtaggttcaattttcaaaatgtagacgtacaataatttaaatcaataagaaagtga 50652375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 474 - 556
Target Start/End: Complemental strand, 46536383 - 46536301
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||| ||||||  ||||||||||    ||||||||||||||||||| | ||||| |  |||||| ||||||||||||||    
T  46536383 aaatcaatatatgtcataccactttgtgtatgttcaattttcaaagtgtaaacccacactattttaaagcaataagagagtga 46536301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 506 - 556
Target Start/End: Complemental strand, 52279348 - 52279298
Alignment:
Q  506 ttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||||||||||| |||| ||||||||||||| | ||||| ||||||||    
T  52279348 ttcaattttcaaagtttagacccacaatgatttagatcaataggagagtga 52279298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 506 - 547
Target Start/End: Original strand, 46287532 - 46287573
Alignment:
Q  506 ttcaattttcaaagtgtagatccacaatgatttaaaccaata 547  Q
    ||||||||||||||||| ||  ||||||||||||||||||||    
T  46287532 ttcaattttcaaagtgttgactcacaatgatttaaaccaata 46287573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 48608122 - 48608163
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccacttt 498  Q
    |||||||||||| |||||||| ||||||||||| ||||||||    
T  48608122 cactcttttattggataaaattaatgtatgtcccaccacttt 48608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 1e-34; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 457 - 597
Target Start/End: Complemental strand, 32211922 - 32211786
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  32211922 cactcttttattagatgaaatcaatgtatgtccaactactttgtgtgagttcaatttttaaggtgtagacccacaatgatttaaaccaataagagagtga 32211823  T
Q  557 gttttaaagaaaatgtttaaaattaagagagtgttgctaat 597  Q
       ||||||||| |||| ||    |||||||||||||||||    
T  32211822 tcattaaagaaagtgttgaa----aagagagtgttgctaat 32211786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 41958085 - 41958226
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||| ||||||||||||||||||||||| || | |  ||||| |||||| ||| |||||||||||||||| |||| |||||  | ||||||||||    
T  41958085 gaatgctagtaacactcacttttcaacactctcaagcact--cactcatttattggatgaaatcaatgtatgtcccaccattttgtgggggttcaatttt 41958182  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||    
T  41958183 caaagtgtagacccacagtgatttaaaccaataagagagtgagt 41958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 26980442 - 26980299
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||| |||||||||||||||||||||||||   ||   |||||| ||||| ||| |||||||||||||||| |||| |||||  ||||||||||||    
T  26980442 gaatgctaacaacactcacttttcaacactctctctaatactcactctattattggatgaaatcaatgtatgtcccaccattttgtgtgagttcaatttt 26980343  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||| | || ||||||||||||||||| ||||||||||||||||    
T  26980342 caaaatatacatccacaatgatttaaatcaataagagagtgagt 26980299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 463 - 573
Target Start/End: Original strand, 33193098 - 33193208
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttta 562  Q
    |||||| ||| |||||||||||||| | |||| ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  33193098 tttattggatgaaatcaatgtatgtgccaccattttgtgagggttcaattttcaaagtgtagacccacaatgatttaaaccaataagagaatgagtatta 33193197  T
Q  563 aagaaaatgtt 573  Q
     ||||| ||||    
T  33193198 gagaaagtgtt 33193208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 30679049 - 30678948
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||| | | |||||||||||||||||||| ||||||||||  | |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  30679049 cactctttcaatggataaaatcaatgtatgtcccaccactttgtgtgggttcaattttcaaagtgtagactcacaatgatttaagccaataagagagtga 30678950  T
Q  557 gt 558  Q
    ||    
T  30678949 gt 30678948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 41948284 - 41948183
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| |||||||||||||||| | | ||||||||||    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  41948284 cactcttttattggataaaatcaatgtatattctaccactttgtgttggttcaattttcaaagtgtaaatccacaatgatttaaatcaataagagagtga 41948185  T
Q  557 gt 558  Q
    ||    
T  41948184 gt 41948183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 19101739 - 19101638
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||||||||||||||||  ||||||||||||||||||||| |||||    
T  19101739 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctattttcaaagtgtagatctgcaatgatttaaaccaataagaaagtga 19101640  T
Q  557 gt 558  Q
    ||    
T  19101639 gt 19101638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 2225226 - 2225367
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||| |||||||| ||||||||||||||||| |    |||||||||||| ||| |||||||||||||||| ||||||||||  | ||||  |||     
T  2225226 gaatgctagtaacactcaattttcaacactctctagcacc--cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcggttta 2225323  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||| | ||| |||||||||||||||||| |||||||    
T  2225324 caaagtgtagaccgacagtgatttaaaccaataagaaagtgagt 2225367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 550
Target Start/End: Complemental strand, 6325990 - 6325858
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    ||||||||||||| ||||||||| ||||||||||| || |  ||||| ||||||| ||||||||||||||||||| |||| |||||  ||||||  ||||    
T  6325990 gaatactagcaacgctcacttttgaacactctctaataat--cactcatttattaaataaaatcaatgtatgtcccaccattttgtgtgagttc-ttttt 6325894  T
Q  515 caaagtgtagatccacaatgatttaaaccaataaga 550  Q
    ||||||||| | |||||||||| |||||||| ||||    
T  6325893 caaagtgtaaacccacaatgatgtaaaccaacaaga 6325858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 555
Target Start/End: Original strand, 11987626 - 11987766
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||||||| |||||||||||||||||||||||||   |  |  | || |||||| ||| |||| ||||||||| | ||||||| ||  | ||||||||||    
T  11987626 gaatactaacaacactcacttttcaacactctctccaacatttattcatttattggatgaaattaatgtatgttccaccacttagtgcgggttcaatttt 11987725  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  11987726 caaagtgtagacccacaatgatttaaaccattaagagagtg 11987766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 1093211 - 1093118
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    ||||| |||||||||| |||||||||||||| | ||||||||||| |||||  |||| |||||||||| ||||||||||||||||| |||||||    
T  1093211 cactcgtttattagatgaaatcaatgtatgttccaccactttgtatgagttatatttccaaagtgtagttccacaatgatttaaactaataaga 1093118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 463 - 556
Target Start/End: Original strand, 39499442 - 39499535
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||||||||||||||||||||||  | |||||| |  |||||||||||||||| |||||||||||||||||||||  |||||||| |||||    
T  39499442 tttattagataaaatcaatgtatgtcatatcactttttgtgagttcaattttcaaaatgtagatccacaatgatttaattcaataagaaagtga 39499535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 415 - 596
Target Start/End: Complemental strand, 6133804 - 6133628
Alignment:
Q  415 gaatactagcaacactcacttttcaaca--ctctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||||||||||||||||||||||  |||||||| | |  ||| |||||||| ||| |||||||| ||||||| ||||  ||||  | ||||||||    
T  6133804 gaatgctagcaacactcacttttcaacaatctctctagcact--cacccttttattggatgaaatcaatatatgtcccaccatattgtgtgggttcaatt 6133707  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaattaagagagtgttgctaa 596  Q
    |||||||| || | ||||||||| |||||||||||||||||||||| ||| |||  ||||| ||    ||||||||||||||||    
T  6133706 ttcaaagtctacacccacaatga-ttaaaccaataagagagtgagtattagagaggatgttcaa----aagagagtgttgctaa 6133628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 466 - 558
Target Start/End: Original strand, 8899065 - 8899157
Alignment:
Q  466 attagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| |||| || |||||||| ||| ||||||  | |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  8899065 attagatgaaataaaggtatgtcccacccctttgtgtgggttcaattttcaaagtgtaggtccacaataatttaaaccaataagagagtgagt 8899157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 457 - 549
Target Start/End: Original strand, 22540410 - 22540502
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 549  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| |||| |||||||||||||| ||||||||||||||||||||    
T  22540410 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttccaaagtgtagatccgcaatgatttaaaccaataag 22540502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 474 - 555
Target Start/End: Complemental strand, 10659889 - 10659808
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    ||||||||| |||||| ||||||||||    ||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  10659889 aaatcaatggatgtccgaccactttgtgtaggttcaattttcaaagtgtagacccacgatgatttaaaccaataagagagtg 10659808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 421 - 558
Target Start/End: Complemental strand, 28218222 - 28218085
Alignment:
Q  421 tagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 518  Q
    |||||||||||| |||||||| ||||||  || |||  |||||||||||| ||| |||||||||||||||  ||||||||||  |  |||||||||||||    
T  28218222 tagcaacactcatttttcaaccctctctttagcatt--cactcttttattggatgaaatcaatgtatgtctcaccactttgtgtggattcaattttcaaa 28218125  T
Q  519 gtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| ||||| | |||||||  ||||||| |||||||    
T  28218124 gtgtagaaccacagtaatttaaattaataagatagtgagt 28218085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 559
Target Start/End: Complemental strand, 3872813 - 3872670
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||||||||||||||||||||||||||||  || | |  ||||||| ||||| ||||| ||||| ||||||  ||||||||||    ||||||||    
T  3872813 gaatgctagcaacactcacttttcaacactctctctagcact--cactcttctattaaataaa-tcaatatatgtcacaccactttgtgtaggttcaatt 3872717  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 559  Q
    | ||||||||||| ||||||||||| |||||||||| |||| |||||    
T  3872716 tccaaagtgtagacccacaatgattcaaaccaataaaagagagagtt 3872670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 549
Target Start/End: Original strand, 15523252 - 15523344
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 549  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||  ||||||||||||| ||||||||||||||||||||    
T  15523252 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag 15523344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 549
Target Start/End: Original strand, 15531246 - 15531338
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataag 549  Q
    |||| ||||||| ||| |||||||||||||||| |||||||| |  |||||| ||||  ||||||||||||| ||||||||||||||||||||    
T  15531246 cactattttattggatgaaatcaatgtatgtcccaccactttatgcgagttctatttctaaagtgtagatccgcaatgatttaaaccaataag 15531338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 510 - 566
Target Start/End: Complemental strand, 37553034 - 37552978
Alignment:
Q  510 attttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  37553034 attttcaaagtgtagatccacaatgatttaaatcaataagagagtgagtattaaaga 37552978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 415 - 578
Target Start/End: Complemental strand, 8741405 - 8741240
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct----agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaa 510  Q
    |||| ||||||||||||||||||||| |||||||    |||  |  |||| ||||||| ||| |||||||||||||||  || | |||||  | ||||||    
T  8741405 gaatgctagcaacactcacttttcaaaactctctctttagtggt--cacttttttattggatgaaatcaatgtatgtctcactaatttgtgtgggttcaa 8741308  T
Q  511 ttttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    |||||||||| || |  ||||||||||||||| ||||||||||||||| ||| ||||| |||| ||||    
T  8741307 ttttcaaagtataaacacacaatgatttaaactaataagagagtgagtattagagaaattgttcaaaa 8741240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 457 - 546
Target Start/End: Original strand, 49730906 - 49730995
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaat 546  Q
    |||||||||||||||| |||  ||| ||||||  || |||||||  | ||||||||||||||||||||| ||||||||||||||||||||    
T  49730906 cactcttttattagattaaactaatatatgtcacactactttgtgtgggttcaattttcaaagtgtagacccacaatgatttaaaccaat 49730995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 426 - 578
Target Start/End: Original strand, 51732290 - 51732440
Alignment:
Q  426 acactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtaga 525  Q
    |||||||||||||||| |||||||  |||  |||| ||||||| ||| |||| ||||||| | | || ||||| |  ||||| |||||||||||| || |    
T  51732290 acactcacttttcaacgctctctaacatt--cacttttttatttgatgaaattaatgtattttccactactttatgtgagtttaattttcaaagtataaa 51732387  T
Q  526 tccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
     ||||||| |||||||||||||| ||||||||| ||| |||||| ||| ||||    
T  51732388 cccacaataatttaaaccaataaaagagtgagtattagagaaaacgttcaaaa 51732440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 460 - 566
Target Start/End: Original strand, 31866361 - 31866466
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 559  Q
    |||||| || ||| |||||||||||||||| || | ||| | |  |||||||||| |||||||| |||||||||||||||||| ||||||| |||||||     
T  31866361 tcttttgttggatgaaatcaatgtatgtcccactattttttgaaggttcaatttttaaagtgta-atccacaatgatttaaactaataagaaagtgagta 31866459  T
Q  560 ttaaaga 566  Q
    |||||||    
T  31866460 ttaaaga 31866466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 464 - 558
Target Start/End: Original strand, 33114020 - 33114114
Alignment:
Q  464 ttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| | |||||| ||||||||| |||| ||| |    ||||||||||||||||||||||||| |||||||||||||||||| | |||||||    
T  33114020 ttattagtttaaatcattgtatgtcccaccattttatgtaggttcaattttcaaagtgtagatccagaatgatttaaaccaataaaaaagtgagt 33114114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 521 - 573
Target Start/End: Complemental strand, 16948603 - 16948551
Alignment:
Q  521 gtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtt 573  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  16948603 gtagatccacaatgatttaaatcaataagagagtgagtattagagaaaatgtt 16948551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 462 - 558
Target Start/End: Original strand, 29673522 - 29673618
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| |||||||||||| ||||||| |||| |||||     |||||||||||||||||||| | ||||| |||||||||||||| | |||||||    
T  29673522 ttttattggataaaatcaatatatgtcccaccattttgtgtagtttcaattttcaaagtgtagaactacaattatttaaaccaataaaaaagtgagt 29673618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 37525571 - 37525667
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagag 553  Q
    |||||||| ||| ||||||| | |||||||| | |||| ||| |  | |||||||||||||||| |||||| |||||||||||||| ||||||||||    
T  37525571 cactctttcattggataaaacccatgtatgttccaccattttatgtgggttcaattttcaaagtctagatctacaatgatttaaactaataagagag 37525667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 415 - 556
Target Start/End: Original strand, 931374 - 931515
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||||||| || |||   ||   ||||||||||||  ||  || |||||||||||| | || ||| |  | ||||||||||    
T  931374 gaatgctagcaacactcacttttcaactctatctctaatactcactcttttattgaatggaagcaatgtatgtcccatcattttttgtgggttcaatttt 931473  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| | || | |||||||||||||||||||||| |||||||    
T  931474 caaaatatacacccacaatgatttaaaccaataaaagagtga 931515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 15468262 - 15468359
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    ||||||||||||| ||| ||||||||||||||  |  |||||||  | |||||||||||| |||||||| ||||||| |||||||  ||||| |||||    
T  15468262 cactcttttattaaatagaatcaatgtatgtctcattactttgtgtgggttcaattttcatagtgtagacccacaataatttaaattaataaaagagt 15468359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 460 - 541
Target Start/End: Original strand, 46335142 - 46335223
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaa 541  Q
    ||||||||| ||| |||||||| ||| ||| |||||||||| ||||||  |||||||| || |||| |||||||||||||||    
T  46335142 tcttttattggatgaaatcaatctatatcctaccactttgtcagagttatattttcaatgtatagacccacaatgatttaaa 46335223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 776 - 823
Target Start/End: Complemental strand, 1286232 - 1286185
Alignment:
Q  776 tatataaacacattagtagttgtgcattttttatctctgaaatataat 823  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  1286232 tatataaacacattagtggttgtacattatttatctctgaaatataat 1286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 471 - 550
Target Start/End: Complemental strand, 45179370 - 45179291
Alignment:
Q  471 ataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    ||||||||||||||||| | | |||||||| || ||||||||||||||||||| | ||||||| | |||||  |||||||    
T  45179370 ataaaatcaatgtatgttccatcactttgtgagggttcaattttcaaagtgtaaacccacaataacttaaattaataaga 45179291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 13114808 - 13114706
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtg 555  Q
    ||||||||||||||||||||||||| ||||||| |||||||| || |  ||| |||| |||| ||||  | ||||| |||||||| ||||| ||| ||||    
T  13114808 cactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtataacccacattgatttaacccaatgagatagtg 13114709  T
Q  556 agt 558  Q
    |||    
T  13114708 agt 13114706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 41918037 - 41918139
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  |  ||| ||||||||||||||| ||| ||| |||||| | ||||||| ||||||    
T  41918037 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtggattccattttcaaagtgtaggtcctacattgattttacccaataaaagagtg 41918136  T
Q  556 agt 558  Q
    |||    
T  41918137 agt 41918139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 15928597 - 15928698
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| |||  |||  |||||||||  |||| |||||  |||||| |||||||| |||||||   ||| |||||||||||||||| |||||||    
T  15928597 cactcttttatttgatggaattcatgtatgtctcaccattttgtgtgagttctattttcaaggtgtagacttacagtgatttaaaccaataaaagagtga 15928696  T
Q  557 gt 558  Q
    ||    
T  15928697 gt 15928698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 578
Target Start/End: Original strand, 15906458 - 15906573
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 561  Q
    |||||||  |||||||||||||||||||| | |||||||  ||  ||||||| |||| |||||||  ||||||||||||| ||||||  || ||||| ||    
T  15906458 ttttattgcataaaatcaatgtatgtccatc-actttgtgtgaactcaatttacaaaatgtagatttacaatgatttaaatcaataaacgaatgagtatt 15906556  T
Q  562 aaagaaaatgtttaaaa 578  Q
    | ||| |||||| ||||    
T  15906557 agagataatgttaaaaa 15906573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 29418523 - 29418615
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataa 548  Q
    |||||||||||| |||||||| ||||||| ||  |||||||| |  |||||| |||| |||||||||||||| ||| |||||| | |||||||    
T  29418523 cactcttttattggataaaattaatgtatatctcaccactttatgtgagttctatttccaaagtgtagatcctacattgatttcacccaataa 29418615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 420 - 552
Target Start/End: Original strand, 35336871 - 35336997
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    |||||||||||||||||||||||  |||||| | |  || | ||||||| ||| |||||||||| |     ||||||||||  | |||||||||||  |     
T  35336871 ctagcaacactcacttttcaacatcctctagcact--cattattttattggatgaaatcaatgtctc----accactttgtgtgggttcaattttcttaa 35336964  T
Q  520 tgtagatccacaatgatttaaaccaataagaga 552  Q
    ||||||  |||||||||||||||||||||||||    
T  35336965 tgtagacacacaatgatttaaaccaataagaga 35336997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 463 - 558
Target Start/End: Complemental strand, 39974326 - 39974237
Alignment:
Q  463 tttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||| ||||||||| |||| | |||| |||||| | ||||||      ||||| ||||  ||||||||||||||||||||||||||||||    
T  39974326 tttattagatgaaatcaatggatgttccaccattttgtatgggttcaa------aagtgcagatttacaatgatttaaaccaataagagagtgagt 39974237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 558
Target Start/End: Complemental strand, 12767420 - 12767365
Alignment:
Q  503 gagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||| ||||| ||||||||||  || |||||||||||||||||| |||||||||    
T  12767420 gagttctatttttaaagtgtagactcataatgatttaaaccaataaaagagtgagt 12767365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 15906632 - 15906679
Alignment:
Q  507 tcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    ||||||||||||||||||||| ||||| |||||||  |||||||||||    
T  15906632 tcaattttcaaagtgtagatctacaataatttaaattaataagagagt 15906679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 548
Target Start/End: Original strand, 44272008 - 44272051
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||    
T  44272008 gttcaattttcaaagtgtagaacaacaatgatttaaatcaataa 44272051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 50539166 - 50539257
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||||||||||| ||| ||||||| |||||| | |||||||| |  | |||||||||||  ||||||||  | ||||||||||||| |||||    
T  50539166 cactcttttattggatgaaatcaaagtatgttccaccactttatgtgggttcaattttctcagtgtagacacgcaatgatttaaactaataa 50539257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 11135781 - 11135883
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    |||| ||||||| | | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| ||||||    
T  11135781 cactattttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtg 11135880  T
Q  556 agt 558  Q
    |||    
T  11135881 agt 11135883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 498
Target Start/End: Original strand, 15660935 - 15660976
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccacttt 498  Q
    |||||||||||| ||||||||||||| |||||| ||||||||    
T  15660935 cactcttttattggataaaatcaatgcatgtcccaccacttt 15660976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 556
Target Start/End: Original strand, 27570293 - 27570366
Alignment:
Q  483 tatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||| |||| |||||  ||||| |||||| |||||||| | |||||||||||| ||| ||||||| |||||    
T  27570293 tatgtcccaccaatttgtgtgagtttaatttttaaagtgtaaacccacaatgatttgaactaataagaaagtga 27570366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 33114039 - 33113990
Alignment:
Q  529 acaatgatttaaaccaataagagagtgagttttaaagaaaatgtttaaaa 578  Q
    |||||||||||||| ||||||| ||||||| ||||||||| | |||||||    
T  33114039 acaatgatttaaactaataagaaagtgagtattaaagaaagtatttaaaa 33113990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 47644387 - 47644334
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||| |||||||| ||||| | ||||||||||||||| ||||||||||| ||||    
T  47644387 gttctattttcaatgtgtaaacccacaatgatttaaatcaataagagagcgagt 47644334  T

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Target: chr7 (Bit Score: 71; Significance: 1e-31; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 413 - 558
Target Start/End: Original strand, 46517291 - 46517434
Alignment:
Q  413 atgaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||||| |||||||||||||||||| |||||||||||| | |  ||||| |||||| |||||||||||||||| ||| |||| | |||  | ||||||||    
T  46517291 atgaatgctagcaacactcactttttaacactctctagcact--cactcatttattggataaaatcaatgtatatcccaccattctgtgggggttcaatt 46517388  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||    
T  46517389 ttcaaagtgtagactcacaatgatttaaaccaataagagaatgagt 46517434  T

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Target: chr7; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 470 - 558
Target Start/End: Original strand, 27888337 - 27888425
Alignment:
Q  470 gataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||||||||| ||||||||||  | |||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  27888337 gataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgtagacccacaatgatttaaaccaataagagagtgagt 27888425  T

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Target: chr7; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 415 - 555
Target Start/End: Complemental strand, 31502644 - 31502504
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||||||||||||||||||||||| |||||   |    |||||||||||| ||| ||||||| |||||||| |||| |||||  | ||||||||||    
T  31502644 gaatgctagcaacactcacttttcaacagtctctctaacactcactcttttattggatgaaatcaaggtatgtcccaccattttgtgtgcgttcaatttt 31502545  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  31502544 caaagtgtagactcacaatgatttaaaccaataagagagtg 31502504  T

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Target: chr7; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 32205079 - 32205219
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||| ||||||||||  || |  |||||||||||| ||| |||||||||||||||| |||| |||||  | ||||||||||    
T  32205079 gaatgctagcaacactcacttttgaacactctctc-tact--cactcttttattggatgaaatcaatgtatgtcctaccattttgtgtgggttcaatttt 32205175  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
     ||||| ||| || |||||||||||||| |||||||||||||||    
T  32205176 taaagtataggtctacaatgatttaaactaataagagagtgagt 32205219  T

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Target: chr7; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 22189939 - 22190082
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||| |||||||| |||||||||||||||  || | |  |||||||||||| ||| ||||||||||||| || ||||||||||  | ||||||||    
T  22189939 gaatgctagaaacactcatttttcaacactctctctagcact--cactcttttattggatgaaatcaatgtatggcccaccactttgtgtgggttcaatt 22190036  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||| || |||||||||||||||||||  ||||||||    
T  22190037 ttcaaagtgtagacccgcaatgatttaaaccaataaacgagtgagt 22190082  T

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Target: chr7; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 425 - 566
Target Start/End: Original strand, 7459353 - 7459494
Alignment:
Q  425 aacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtag 524  Q
    ||||||||||||| |||| ||||||  ||   || ||||||||| |||||||||||||||| | | |||||||| |  ||| |||||||||||| | |||    
T  7459353 aacactcactttttaacattctctataatactcattcttttattcgataaaatcaatgtatattccaccactttatgtgagctcaattttcaaaatatag 7459452  T
Q  525 atccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    ||||||||| |||||||||||||| ||||||||| |||||||    
T  7459453 atccacaataatttaaaccaataaaagagtgagtattaaaga 7459494  T

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Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 462 - 596
Target Start/End: Complemental strand, 25686968 - 25686838
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtttt 561  Q
    ||||||| ||| |||||||||||||||  |||||||| || | ||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||    
T  25686968 ttttatttgatgaaatcaatgtatgtcataccactttttatgggttcaattttcaaagtgtagacccacaatgatttaaaccaataagataatgagtatt 25686869  T
Q  562 aaagaaaatgtttaaaattaagagagtgttgctaa 596  Q
    | | | |||||| ||    ||||||||||||||||    
T  25686868 agaaagaatgttcaa----aagagagtgttgctaa 25686838  T

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Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 415 - 563
Target Start/End: Original strand, 33008104 - 33008252
Alignment:
Q  415 gaatactagcaacactcacttttcaacact--ctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| |||||||||||||||||| ||||||  |||||| | |  |||||||||||| ||| |||||| ||||||||| ||||||||||  | |||| |||    
T  33008104 gaatgctagcaacactcacttttgaacactatctctagcact--cactcttttattggatgaaatcattgtatgtcccaccactttgtgtgggttctatt 33008201  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaa 563  Q
    | ||| ||||||| |||||||||||||||||||||| |||| |||| ||||    
T  33008202 tccaatgtgtagacccacaatgatttaaaccaataaaagagagagtattaa 33008252  T

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Target: chr7; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 457 - 556
Target Start/End: Original strand, 7775042 - 7775140
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||  |||||||||||||||||||| || ||| |||||||||||| |||||| ||||||    
T  7775042 cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgagttcaattttcaaagtgtgga-ccagaatgatttaaacaaataagtgagtga 7775140  T

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Target: chr7; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 420 - 558
Target Start/End: Complemental strand, 12263611 - 12263473
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatt-tacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaa 518  Q
    ||||||||||| |||||||||||||||||  |||  | |||||||||||  |||  ||||||||||||||| | ||||||||    | ||||||||||||    
T  12263611 ctagcaacacttacttttcaacactctctc-tatcatccactcttttatcggatggaatcaatgtatgtcccatcactttgtgtaggatcaattttcaaa 12263513  T
Q  519 gtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  12263512 gtgtagacccacaatgatttaaaccaataagatagtgagt 12263473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 424 - 558
Target Start/End: Original strand, 27949282 - 27949416
Alignment:
Q  424 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 523  Q
    |||||||||||||| ||||||||||   |    ||||||| |||| ||| |||||||  ||||||| |||| |||||  |||||||| ||||||||||||    
T  27949282 caacactcactttttaacactctctctaacactcactcttgtattggatgaaatcaagttatgtcctaccattttgtgtgagttcaaatttcaaagtgta 27949381  T
Q  524 gatccacaatgatttaaaccaataagagagtgagt 558  Q
    || |||||||||||||||| |||||||||||||||    
T  27949382 gacccacaatgatttaaactaataagagagtgagt 27949416  T

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Target: chr7; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 474 - 566
Target Start/End: Original strand, 6442224 - 6442316
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    |||||||||||||| | |||| |||||  |  |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  6442224 aaatcaatgtatgttccaccattttgtggggattcaattttcaaagtgtagacccacaatgatttaaaccaataaaagagtgagtattaaaga 6442316  T

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Target: chr7; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 14795131 - 14795274
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 513  Q
    |||| |||||||||||||||||||||||||||||  |||    |||| ||||||| ||| |||||||||||||||| |||| ||| |    |||||||||    
T  14795131 gaatgctagcaacactcacttttcaacactctctc-tatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaattt 14795229  T
Q  514 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    | |||||||| ||||| |||||||||||| |||||||||||||||    
T  14795230 ttaaagtgtatatccataatgatttaaactaataagagagtgagt 14795274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 415 - 558
Target Start/End: Original strand, 15242123 - 15242266
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattt 513  Q
    |||| |||||||||||||||||||||||||||||  |||    |||| ||||||| ||| |||||||||||||||| |||| ||| |    |||||||||    
T  15242123 gaatgctagcaacactcacttttcaacactctctc-tatcagtcacttttttattggatgaaatcaatgtatgtcccaccaatttttgttggttcaattt 15242221  T
Q  514 tcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    | |||||||| ||||| |||||||||||| |||||||||||||||    
T  15242222 ttaaagtgtatatccataatgatttaaactaataagagagtgagt 15242266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 460 - 558
Target Start/End: Complemental strand, 32213004 - 32212907
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||| ||| |||||||||||||||  || |||||||| | |||||||||| ||| |||||  ||||||||||||||||||||||||||||||||    
T  32213004 tcttttattggatgaaatcaatgtatgtctcactactttgtatgtgttcaatttttaaaatgtagc-ccacaatgatttaaaccaataagagagtgagt 32212907  T

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Target: chr7; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 11692221 - 11692322
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||    ||||||||||||||||||| |  |||| |||||||||| |||| ||||||||    
T  11692221 cactcttttattggatgaaatcaatgtatgtcctaccactttgtgtaggttcaattttcaaagtgtaaactcacagtgatttaaactaatatgagagtga 11692320  T
Q  557 gt 558  Q
    ||    
T  11692321 gt 11692322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 11824113 - 11824214
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||| |||||||||||||||| |||| |||||     |||||||||||||||||| | ||||||||||||||| |||||||| |||||    
T  11824113 cactcttttattggatgaaatcaatgtatgtcccaccattttgtgtagcttcaattttcaaagtgtaaacccacaatgatttaaatcaataagaaagtga 11824212  T
Q  557 gt 558  Q
    ||    
T  11824213 gt 11824214  T

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Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 48374617 - 48374476
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| |||||||||||||||||| |||||||||||||| |  ||||||||||||  ||  |||  ||| |||||| |||||||| || | |||| ||||     
T  48374617 gaatgctagcaacactcacttttgaacactctctagtact--cactcttttattgaatggaattcatgcatgtcccaccactttctatgggttctatttc 48374520  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||| |  |||||| ||||||||||| ||||||||||||    
T  48374519 caaagtgtatactcacaataatttaaaccaacaagagagtgagt 48374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 471 - 554
Target Start/End: Complemental strand, 23564159 - 23564076
Alignment:
Q  471 ataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    ||||||| ||||||||||  ||||||||||| |||||| |||||||||||||||||||||  | |||||||||||||| |||||    
T  23564159 ataaaattaatgtatgtcgcaccactttgtatgagttctattttcaaagtgtagatccactgtaatttaaaccaataaaagagt 23564076  T

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Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 421 - 558
Target Start/End: Complemental strand, 19423008 - 19422871
Alignment:
Q  421 tagcaacactcacttttcaacactctctagtattta-cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||||||||||||||||||||||||  |||    |||||||| ||| ||| |||||||||||||||| ||| | |||||      | |||||| |||    
T  19423008 tagcaacactcacttttcaacactctctc-tatcactcactctttcattggatgaaatcaatgtatgtcccaccccattgtattgtcactattttcgaag 19422910  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  19422909 tgtagatccacaatgatttaaaccaataaaagagtgagt 19422871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 420 - 566
Target Start/End: Original strand, 39254088 - 39254234
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||||| ||||||||||||| ||||||       ||||||||||||  ||||||| |||||||||   ||||||||||    |||||||||| |||     
T  39254088 ctagcaacattcacttttcaacattctctatagcactcactcttttattgaataaaattaatgtatgtttcaccactttgtgttggttcaatttttaaaa 39254187  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    |||||| ||||||| ||||||| |||||||||||||||| |||||||    
T  39254188 tgtagacccacaataatttaaatcaataagagagtgagtgttaaaga 39254234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 430 - 556
Target Start/End: Complemental strand, 32178966 - 32178843
Alignment:
Q  430 tcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcca 529  Q
    ||||||||||||||||||||| | ||||  | ||||||| ||| |||| ||||||||| | |||||| |||   | |||||||||||||||||| |  ||    
T  32178966 tcacttttcaacactctctagcacttac--tattttattggatgaaattaatgtatgttccaccactctgtttta-ttcaattttcaaagtgtatacaca 32178870  T
Q  530 caatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||||||||||||||    
T  32178869 caatgatttaaatcaataagagagtga 32178843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 44350940 - 44350839
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| |||||||||||||||    ||||||||    |||||||||||||||||||||  |||||||||||||||||| || |||||||    
T  44350940 cacttttttattggatcaaatcaatgtatgtctcgtcactttgtttaggttcaattttcaaagtgtagactcacaatgatttaaaccaacaaaagagtga 44350841  T
Q  557 gt 558  Q
    ||    
T  44350840 gt 44350839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 460 - 564
Target Start/End: Complemental strand, 10934100 - 10933996
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 559  Q
    ||||||||| |||||||| ||| ||||||  ||||||||||| |  ||| |||| |||||| || | |||||||||||||||| ||||||||| |||||     
T  10934100 tcttttattggataaaattaatatatgtctcaccactttgtatggtttctatttccaaagtataaacccacaatgatttaaactaataagagattgagta 10934001  T
Q  560 ttaaa 564  Q
    |||||    
T  10934000 ttaaa 10933996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 415 - 526
Target Start/End: Original strand, 12270988 - 12271096
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||||||||||  ||||||||||||||||||     | ||||||||||| |||| |||||||||||||||| ||||||||||  | |||| |||||    
T  12270988 gaatgctagcaacac--acttttcaacactctctatagcatccactcttttatcagatgaaatcaatgtatgtcccaccactttgtgtg-gttctatttt 12271084  T
Q  515 caaagtgtagat 526  Q
    ||||||||||||    
T  12271085 caaagtgtagat 12271096  T

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Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 424 - 548
Target Start/End: Complemental strand, 25092832 - 25092708
Alignment:
Q  424 caacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta 523  Q
    |||||||||||||||||||||||||        |||||||| ||| |||  ||||||||||||||| || |||||||  ||||||||||||| |||| ||    
T  25092832 caacactcacttttcaacactctcttccgcacccactctttcatttgatgcaatcaatgtatgtcctactactttgtgtgagttcaattttctaagtata 25092733  T
Q  524 gatccacaatgatttaaaccaataa 548  Q
    ||  |||||| ||||||||||||||    
T  25092732 gacacacaataatttaaaccaataa 25092708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 24539261 - 24539159
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtg 555  Q
    |||||||||||| |||||||||||| ||||||| |||||||| || |  ||| |||| |||| |||| || ||||| |||||||| ||||| ||||||||    
T  24539261 cactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacattgatttaacccaatgagagagtg 24539162  T
Q  556 agt 558  Q
    |||    
T  24539161 agt 24539159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 36845612 - 36845567
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  36845612 gttcaattttcaaagtatagacccacaatgatttaaaccaataaga 36845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 800 - 884
Target Start/End: Complemental strand, 39364420 - 39364335
Alignment:
Q  800 cattttttatctctgaaatataatgtt-agttttcacgtggcatcagagctcctgatcttggggggtcttgtttccgcataaaccc 884  Q
    |||| ||||||| ||||||||||  || ||||||||| ||  ||||||||||||||||||| |||| |||| ||||||||||||||    
T  39364420 cattatttatctttgaaatataacattcagttttcacatgatatcagagctcctgatcttgaggggccttgcttccgcataaaccc 39364335  T

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Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 19494477 - 19494385
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataa 548  Q
    |||||||||||| | | |||||||||||||||| |||||||| |  | |||| ||||||||||||||||||| ||| |||||| | |||||||    
T  19494477 cactcttttattgggtgaaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtagatcctacattgatttcacccaataa 19494385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 532
Target Start/End: Complemental strand, 44511107 - 44510999
Alignment:
Q  424 caacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtg 521  Q
    ||||||| |||||||||||||||||  || | |  |||| ||||||| ||| |||||||||||||||  | ||||||||  | ||||||||||||| |||    
T  44511107 caacacttacttttcaacactctctctagcact--cacttttttattggatgaaatcaatgtatgtctcatcactttgtctgtgttcaattttcaatgtg 44511010  T
Q  522 tagatccacaa 532  Q
    |||||||||||    
T  44511009 tagatccacaa 44510999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 558
Target Start/End: Original strand, 17749736 - 17749838
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgta-gatccacaatgatttaaaccaataagagagtg 555  Q
    |||||||||||| |||||||||||| ||||||| |||||||| || |  ||  |||| |||| |||| || ||||| |||||||| ||||| ||||||||    
T  17749736 cactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacattgatttaacccaatgagagagtg 17749835  T
Q  556 agt 558  Q
    |||    
T  17749836 agt 17749838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 573
Target Start/End: Original strand, 1316374 - 1316431
Alignment:
Q  516 aaagtgtagatccacaatgatttaaaccaataagagagtgagttttaaagaaaatgtt 573  Q
    |||||||| ||  |||||||||||||||||||| ||||||||| ||| ||||||||||    
T  1316374 aaagtgtacatttacaatgatttaaaccaataaaagagtgagtattagagaaaatgtt 1316431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 6580092 - 6580039
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||| | | || ||||||| ||||||||||||||||||||||||    
T  6580092 gttcaattttcaaaatatggacccacaataatttaaaccaataagagagtgagt 6580039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 415 - 516
Target Start/End: Complemental strand, 8073468 - 8073367
Alignment:
Q  415 gaatactagcaacactcacttttcaacactct--ctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    ||||||||| |||||||| ||||||||| |||  |||| | |  |||||||||||  ||| |||||||||||||||| ||||||||||   |||||||||    
T  8073468 gaatactagtaacactcatttttcaacattcttcctagcact--cactcttttatcggatgaaatcaatgtatgtcccaccactttgtgtaagttcaatt 8073371  T
Q  513 ttca 516  Q
    ||||    
T  8073370 ttca 8073367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 550
Target Start/End: Original strand, 9648982 - 9649059
Alignment:
Q  473 aaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    ||||||||||||||| | ||||||||||  | ||||  ||| ||| ||||| | ||||||||||||||||||||||||    
T  9648982 aaaatcaatgtatgttccaccactttgtgcgggttctgtttccaatgtgtatacccacaatgatttaaaccaataaga 9649059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 556
Target Start/End: Complemental strand, 36845566 - 36845530
Alignment:
Q  520 tgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||| ||||||||||||||||||||||||||||||    
T  36845566 tgtagacccacaatgatttaaaccaataagagagtga 36845530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 566
Target Start/End: Original strand, 12167319 - 12167358
Alignment:
Q  527 ccacaatgatttaaaccaataagagagtgagttttaaaga 566  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  12167319 ccacaatgatttaaaccaataagaaagtgagtattaaaga 12167358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 558
Target Start/End: Complemental strand, 17354662 - 17354563
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||| ||| |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| | |||||||    
T  17354662 tcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaagtgtaggtcctacattgattttacccaataaaaaagtgagt 17354563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 480 - 558
Target Start/End: Original strand, 1688048 - 1688126
Alignment:
Q  480 atgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||  ||||||||| | |||||  |||| ||||||||||| | |||| ||||||| ||||||| |||||||||    
T  1688048 atgtatgtctcaccactttgcatgagttttatttccaaagtgtagacctacaacgatttaacccaataaaagagtgagt 1688126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 25428617 - 25428515
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    ||||||||||||   | |||||||||||||||| |||||||| |  | |||  |||| |||||||||||||| ||| |||||| | ||||||| ||||||    
T  25428617 cactcttttattgtgtgaaatcaatgtatgtcccaccactttatgtgggttacatttccaaagtgtagatcctacattgattttatccaataaaagagtg 25428518  T
Q  556 agt 558  Q
    |||    
T  25428517 agt 25428515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 31874117 - 31874159
Alignment:
Q  516 aaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||  |||||||||||||||| ||||||||||||||    
T  31874117 aaagtgtagactcacaatgatttaaacctataagagagtgagt 31874159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 3855900 - 3855851
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
    ||||||||||||||||  ||| | |||||||||||||||||||| |||||    
T  3855900 gttcaattttcaaagttcagacctacaatgatttaaaccaataaaagagt 3855851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 558
Target Start/End: Original strand, 13919839 - 13919924
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||||| |||||||| |  | |||| ||||||||||||||| ||| ||| |||||| | |||||||  ||||||||    
T  13919839 aaatcaatgtatgtcccaccactttatgtgggttccattttcaaagtgtaggtcctacattgatttcacccaataaatgagtgagt 13919924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 10142154 - 10142013
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||||||||||||| ||||||||||||| ||| | |  |||||||||||| |||||||||||||||||||| ||||||||||    |||| |||||    
T  10142154 gaatgctagcaacactcatttttcaacactctatagcact--cactcttttattggataaaatcaatgtatgtcccaccactttgtgttggttccatttt 10142057  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  10142056 caaagtgtagaccaacaattatttaaatcaataagagagtgagt 10142013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 415 - 558
Target Start/End: Complemental strand, 28490902 - 28490759
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctct--agtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatt 512  Q
    |||| ||||||||| ||||||||||| |||||||  || |||  |||| ||||||| ||| ||||||| |||||||| ||||||||||   |||||||||    
T  28490902 gaatgctagcaacagtcacttttcaaaactctctctagcatt--cacttttttattggatgaaatcaaagtatgtcccaccactttgtgtaagttcaatt 28490805  T
Q  513 ttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    || |||||||||| ||||||| ||||||||||||||||||||||||    
T  28490804 ttgaaagtgtagacccacaataatttaaaccaataagagagtgagt 28490759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 464 - 557
Target Start/End: Original strand, 39246657 - 39246750
Alignment:
Q  464 ttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 557  Q
    ||||| |||||||||||||||||||| ||||||||||  ||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||    
T  39246657 ttattggataaaatcaatgtatgtcccaccactttgtgtgagttcagttttcaaagtgtagacccacaatactttaaaccaataagagagtgag 39246750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 457 - 555
Target Start/End: Original strand, 34368402 - 34368500
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||||| ||| ||||||| |||||||||| | ||||||||||  | ||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  34368402 cactctttcattggataaaaccaatgtatgttccaccactttgtgtgggttcatttttcaaagtgtagacccacaatgatttaaaccaataagagagtg 34368500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 5413875 - 5413774
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||  | ||||||||| ||||||||||| ||| |||||||||||||||||| | |||||    
T  5413875 cactcttttattggatgaaatcaatgtatgtcccaccactttgtgtgggttcaatttacaaagtgtagacccataatgatttaaaccaataaaaaagtga 5413776  T
Q  557 gt 558  Q
    ||    
T  5413775 gt 5413774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 457 - 566
Target Start/End: Complemental strand, 25710610 - 25710501
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||||||||   | |||||||||||||||| ||||||| ||| |||||| |||||||||||||||| ||||||| |||||||||||||||||| |||    
T  25710610 cactcttttattgtgtgaaatcaatgtatgtcctaccacttcgtatgagttctattttcaaagtgtagacccacaataatttaaaccaataagagaatga 25710511  T
Q  557 gttttaaaga 566  Q
     | |||||||    
T  25710510 atattaaaga 25710501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 421 - 556
Target Start/End: Complemental strand, 28090401 - 28090268
Alignment:
Q  421 tagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 520  Q
    |||||||||| | ||||||||||||||||  | ||||  | || ||||| || ||||||||  |||||| ||||||||||  ||||||||||||||||||    
T  28090401 tagcaacacttatttttcaacactctctatcacttac--tattatattatatgaaatcaattcatgtcccaccactttgtgtgagttcaattttcaaagt 28090304  T
Q  521 gtagatccacaatgatttaaaccaataagagagtga 556  Q
     |||||| |||||||||||||||||||| |||||||    
T  28090303 ttagatcaacaatgatttaaaccaataaaagagtga 28090268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 457 - 556
Target Start/End: Complemental strand, 17537240 - 17537141
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||||||||| ||| |||||||||||||||| |||| ||| |    ||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17537240 cactcttttatttgatcaaatcaatgtatgtcccaccaatttttgttggtttaattttcaaagtgtagatccataatgatttaaaccaataagagagtga 17537141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 41330531 - 41330438
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||    |||||||||||||||||||||  |||||||||||||||||||||||    
T  41330531 cactcttttattagatgaaattaatgtatgtcccatcactttgtgtaggttcaattttcaaagtgtagactcacaatgatttaaaccaataaga 41330438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 556
Target Start/End: Original strand, 43405435 - 43405534
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||||||||  || |||||||||||||||  |||||||||||   |||| |||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  43405435 cactcttttattgaatgaaatcaatgtatgtctcaccactttgtatatgttctatttccaaagtgtagacccacaatgatttaaatcaataagagagtga 43405534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 27592590 - 27592492
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||| ||||||| ||| |||||||||||||||  |||||||| |  |||||| |||| |||||||||||||  ||||||||||||||||||||||||||    
T  27592590 cactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatttccaaagtgtagatctgcaatgatttaaaccaataagagagtg 27592492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 456 - 558
Target Start/End: Original strand, 37455390 - 37455491
Alignment:
Q  456 acactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||| |||||| |||||||||||||||||| | |||| |||||  | |||||||||||||||||||||  |||||| | |||||||||||||||||||    
T  37455390 acactcatttattcgataaaatcaatgtatgttccaccattttgtgggggttcaattttcaaagtgtagactcacaat-aattaaaccaataagagagtg 37455488  T
Q  556 agt 558  Q
    |||    
T  37455489 agt 37455491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 30326012 - 30325911
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||| ||||||| ||| |||||||||||||||  |||||||| |  |||||| || | |||||||||||||| ||||||||||||||||||||| |||||    
T  30326012 cactattttattggatgaaatcaatgtatgtctcaccactttatgcgagttctatctccaaagtgtagatccgcaatgatttaaaccaataagaaagtga 30325913  T
Q  557 gt 558  Q
    ||    
T  30325912 gt 30325911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 460 - 550
Target Start/End: Complemental strand, 28434951 - 28434863
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    ||||||||| |||||||||||| ||||||| |||||| |||  |  ||||||||||||||| |||| ||||||||||||||||||||||||    
T  28434951 tcttttattggataaaatcaatatatgtcccaccactgtgttgg--ttcaattttcaaagtttagacccacaatgatttaaaccaataaga 28434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 458 - 558
Target Start/End: Complemental strand, 41105707 - 41105607
Alignment:
Q  458 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgag 557  Q
    ||||||||||| ||| ||||||| | |||||| || |||||||  | ||||||||||||||||| | | ||||| ||||||||||||||||||||| |||    
T  41105707 actcttttattggatgaaatcaagggatgtcccactactttgtgtgggttcaattttcaaagtgcatacccacagtgatttaaaccaataagagagcgag 41105608  T
Q  558 t 558  Q
    |    
T  41105607 t 41105607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 28611958 - 28611819
Alignment:
Q  415 gaatactagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaatttt 514  Q
    |||| ||| |||||||||||||| | ||||||||   |  | |||||||| ||| |||| || || ||||||||| | ||||||||| |||||| |||||    
T  28611958 gaatgctaacaacactcacttttgagcactctctctaacattcactctttcattggatataaccagtgtatgtcccatcactttgtatgagttccatttt 28611859  T
Q  515 caaagtgtagatccacaatgatttaaaccaataagagagt 554  Q
     ||||||||||  |||||||||||||| |||||| |||||    
T  28611858 taaagtgtagacgcacaatgatttaaatcaataaaagagt 28611819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 460 - 566
Target Start/End: Complemental strand, 34384826 - 34384720
Alignment:
Q  460 tcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagtt 559  Q
    ||||||||| | | |||||||||||||||| || | |||||  |||||||||||||||| | ||||  |||||||||||| ||| |||| |||||||||     
T  34384826 tcttttattgggtgaaatcaatgtatgtcccactattttgtgtgagttcaattttcaaattatagactcacaatgatttagaccgataaaagagtgagta 34384727  T
Q  560 ttaaaga 566  Q
    |||||||    
T  34384726 ttaaaga 34384720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 462 - 550
Target Start/End: Complemental strand, 1923685 - 1923597
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataaga 550  Q
    |||||||||||  ||  ||||||||||  ||||||||||  |||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  1923685 ttttattagatgcaaagaatgtatgtcacaccactttgtgtgagttcaatttttaaagtgtagttttacaatgatttaaaccaataaga 1923597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 420 - 556
Target Start/End: Original strand, 25630812 - 25630948
Alignment:
Q  420 ctagcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaag 519  Q
    ||||||| ||| |||||||||||||||||   |  |  ||| |||||||  ||||||| ||||||| ||| || | ||||||   |||||||||||||||    
T  25630812 ctagcaatacttacttttcaacactctctttaacatttactattttatttaataaaattaatgtatatcccactattttgtataggttcaattttcaaag 25630911  T
Q  520 tgtagatccacaatgatttaaaccaataagagagtga 556  Q
    |||||| |||| ||||||||||||||| ||| |||||    
T  25630912 tgtagacccacgatgatttaaaccaattagaaagtga 25630948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 505 - 548
Target Start/End: Complemental strand, 31885921 - 31885878
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  31885921 gttcaattttcaaagtgtagatctacaatgatttaaaccaataa 31885878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 464 - 566
Target Start/End: Complemental strand, 10666819 - 10666717
Alignment:
Q  464 ttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttttaa 563  Q
    |||||||||||||||| ||||| ||| |||||||| |  | |||| ||||| ||| ||||||  |||| | |||||||||||||||||||||| | ||||    
T  10666819 ttattagataaaatcattgtatatcctaccactttatgtgggttccatttttaaattgtagactcacattaatttaaaccaataagagagtgaatgttaa 10666720  T
Q  564 aga 566  Q
    |||    
T  10666719 aga 10666717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 556
Target Start/End: Complemental strand, 17435019 - 17434888
Alignment:
Q  423 gcaacactcacttttcaacactctctagtatttacactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgt 522  Q
    |||||||| |||||||||||||||||  |  |||| | |||||||| ||| |||  ||| ||||| | || | |||||| |||||| ||||  |||||||    
T  17435019 gcaacacttacttttcaacactctct--ttattactcacttttattggattaaacaaatatatgttctactattttgtatgagttctatttctaaagtgt 17434922  T
Q  523 agatccacaatgatttaaaccaataagagagtga 556  Q
    ||| ||||| |||||||||||||||| |||||||    
T  17434921 agacccacattgatttaaaccaataaaagagtga 17434888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 551
Target Start/End: Complemental strand, 28155837 - 28155746
Alignment:
Q  458 actcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagag 551  Q
    |||||||||||  || |||||||||||||| |||||| ||| || | ||| |||||||||||||||||  ||||||| |||| |||||||||||    
T  28155837 actcttttattgaatgaaatcaatgtatgttcaaccattttttatgggtttaattttcaaagtgtaga--cacaatgttttataccaataagag 28155746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 42224729 - 42224627
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtg 555  Q
    |||||||||||||| | |||||||||||||||| |||||||| |  | |||| |||| |||||||||| ||| ||| |||||| | ||||||| ||||||    
T  42224729 cactcttttattaggtgaaatcaatgtatgtcccaccactttatgtgggttccatttccaaagtgtaggtcctacattgatttcacccaataaaagagtg 42224630  T
Q  556 agt 558  Q
    |||    
T  42224629 agt 42224627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 774 - 883
Target Start/End: Complemental strand, 1679066 - 1678953
Alignment:
Q  774 tatatataaacacattagtagttgtgcatttttt---atctctgaaatataat-gttagttttcacgtggcatcagagctcctgatcttggggggtcttg 869  Q
    |||||||||||| |||||| ||||| ||||||||   |||||||||||||||| ||  |||||||| |||||||  ||||  ||||||| ||||| ||||    
T  1679066 tatatataaacatattagtggttgtacatttttttttatctctgaaatataatagtatgttttcacatggcatcgaagcttttgatcttagggggccttg 1678967  T
Q  870 tttccgcataaacc 883  Q
     |||| ||||||||    
T  1678966 cttccacataaacc 1678953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 507 - 558
Target Start/End: Complemental strand, 28223864 - 28223813
Alignment:
Q  507 tcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||||||| |||| ||| |||||||||||||||||| |||||||||    
T  28223864 tcaattttcaaagtatagacccataatgatttaaaccaataaaagagtgagt 28223813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 505 - 548
Target Start/End: Complemental strand, 36337980 - 36337937
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  36337980 gttcaatttccaaagtgtagacccacaatgatttaaaccaataa 36337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 552
Target Start/End: Original strand, 10950145 - 10950223
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 552  Q
    |||||||||||||||| |||| |||||| |  ||| ||||||||||| ||||  || |||||||||||| |||||||||    
T  10950145 aaatcaatgtatgtcccaccattttgtatggattctattttcaaagtatagactcataatgatttaaactaataagaga 10950223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 25919270 - 25919344
Alignment:
Q  474 aaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||||||| ||||||  |||| |||||  | | |||||||||||||||||||  |||||||||||||||||||||    
T  25919270 aaatcaatatatgtctcaccattttgtgtgggatcaattttcaaagtgtagactcacaatgatttaaaccaataa 25919344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 14553602 - 14553655
Alignment:
Q  505 gttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagt 558  Q
    |||||||||| |||||||||| ||||||| | ||||||||| ||||||||||||    
T  14553602 gttcaatttttaaagtgtagacccacaataaattaaaccaacaagagagtgagt 14553655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 43541895 - 43541956
Alignment:
Q  459 ctcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagt 520  Q
    ||||||||||  ||||||||||||||||||  | ||||||||  ||||||||||||||||||    
T  43541895 ctcttttattgaataaaatcaatgtatgtctcatcactttgtgtgagttcaattttcaaagt 43541956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 459 - 558
Target Start/End: Original strand, 24915099 - 24915199
Alignment:
Q  459 ctcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatcc-acaatgatttaaaccaataagagagtgag 557  Q
    |||||||||||| | |||||||| ||||||| |||||||| |  | |||| ||||||||||||||  ||| ||| |||||| | ||||||| ||||||||    
T  24915099 ctcttttattaggtgaaatcaatatatgtcccaccactttatgtgggttccattttcaaagtgtatgtcctacattgatttcacccaataaaagagtgag 24915198  T
Q  558 t 558  Q
    |    
T  24915199 t 24915199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 462 - 556
Target Start/End: Original strand, 2525621 - 2525715
Alignment:
Q  462 ttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtga 556  Q
    ||||||| ||| |||||||||||| |   ||||||||||  || |||  ||||||||||||| || || |||||||||||  |||||||||||||    
T  2525621 ttttattggatgaaatcaatgtatctatcaccactttgtgtgatttctgttttcaaagtgtaaatacataatgatttaaattaataagagagtga 2525715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 494 - 548
Target Start/End: Original strand, 4427321 - 4427375
Alignment:
Q  494 actttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataa 548  Q
    |||||||| || || |||||||||||||||||  ||||||||||||||| |||||    
T  4427321 actttgtatgaatttaattttcaaagtgtagactcacaatgatttaaacaaataa 4427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 461 - 566
Target Start/End: Original strand, 27858 - 27963
Alignment:
Q  461 cttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtgagttt 560  Q
    |||||||| |||  ||||||||||||||| ||||||||||  | |||| |||| ||||||||||| |||||||||||||||||||||||||||||||| |    
T  27858 cttttattggatggaatcaatgtatgtcccaccactttgtgtgggttctatttccaaagtgtagacccacaatgatttaaaccaataagagagtgagtat 27957  T
Q  561 taaaga 566  Q
    ||||||    
T  27958 taaaga 27963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 27000 - 26902
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagagagtg 555  Q
    |||||| ||||| ||  |||||||||||||| | ||||||||||  | ||||||||||||||| ||||| ||| |||| ||||||||||||| ||||||    
T  27000 cactctcttattggaataaatcaatgtatgttccaccactttgtgtgggttcaattttcaaagcgtagacccataatgctttaaaccaataaaagagtg 26902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 9706 - 9801
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 552  Q
    |||| ||||||| ||| |||||||||||| ||| |||| |||||  | |||||||||| ||||||||||  |||||| |||||||| |||||||||    
T  9706 cacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 9801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 11252 - 11347
Alignment:
Q  457 cactcttttattagataaaatcaatgtatgtccaaccactttgtaagagttcaattttcaaagtgtagatccacaatgatttaaaccaataagaga 552  Q
    |||| ||||||| ||| |||||||||||| ||| |||| |||||  | |||||||||| ||||||||||  |||||| |||||||| |||||||||    
T  11252 cacttttttattggatgaaatcaatgtatatcccaccattttgtgtgggttcaattttaaaagtgtagactcacaataatttaaacgaataagaga 11347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 776 - 823
Target Start/End: Complemental strand, 12499 - 12452
Alignment:
Q  776 tatataaacacattagtagttgtgcattttttatctctgaaatataat 823  Q
    ||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  12499 tatataaacacattagtggttgtacattatttatctctgaaatataat 12452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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