View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3120_high_10 (Length: 282)
Name: NF3120_high_10
Description: NF3120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3120_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 273
Target Start/End: Complemental strand, 23324704 - 23324449
Alignment:
| Q |
18 |
gttatgtgcctcataaacattcaaaggccgactcagcctatatgaagtttcttgcggtatcgctgggaataggagttatagctgttgttatgatatggga |
117 |
Q |
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| T |
23324704 |
gttatgtgcctcataaacattcaaaggccgactcagcctatatgaagtttcttgcggtatcgctgggaataggagttatagctgttgttatgatatggga |
23324605 |
T |
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| Q |
118 |
tacctaagatgcttcagaagcaagaagaaattttagtcttttatttataattgtttataatacttttgatttaataatatcataccttttgttagttagc |
217 |
Q |
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| T |
23324604 |
tacctaagatgcttcagaagcaagaagaaattttagtcttttatttttaattgtttataatacttttgatttaataatatcataccttttgttagttagc |
23324505 |
T |
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| Q |
218 |
caagttgatttgttttataaggatgatatttatattttgtagttcaatgatgatgt |
273 |
Q |
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| T |
23324504 |
caagttgatttgttttataaggatgatatttatattttgtagttcaatgatgatgt |
23324449 |
T |
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