View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3120_low_10 (Length: 283)
Name: NF3120_low_10
Description: NF3120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3120_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 14 - 266
Target Start/End: Original strand, 42961349 - 42961601
Alignment:
| Q |
14 |
cacagaacaggcatagtatattacacacatttgaccatcaattttaaatcattgcttgcttgtcattttttaatgtttaaatcgttgttaccagtactgt |
113 |
Q |
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| T |
42961349 |
cacagaacaggcatagtatattacatacatttgaccatcaattttaaatcattgcttgcttgtcattttttaatgtttaaatcgttgttaccagtactgt |
42961448 |
T |
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| Q |
114 |
tactaaggataacattattttgcagaaaaaagatgggatgaatcttgttcctagtgccccaccattgcctgaaatacgatcagcattgtttgaactccac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42961449 |
tactaaggataacattattttgcagaaaaaagatgggatgaatcctgttcctagtgccccaccattgcctgaaatacgatcagcattgtttgaactccac |
42961548 |
T |
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| Q |
214 |
caaaatgatttcgtgggccgaaagaagaagtaaggaacctccaaagtccaact |
266 |
Q |
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| T |
42961549 |
caaaatgatttcgtgggccgaaagaagaagtaaggaacctccaaagtccaact |
42961601 |
T |
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