View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3121_high_14 (Length: 423)

Name: NF3121_high_14
Description: NF3121
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3121_high_14
NF3121_high_14
[»] chr4 (51 HSPs)
chr4 (108-423)||(3047546-3047860)
chr4 (18-59)||(3047912-3047953)
chr4 (375-423)||(25753594-25753642)
chr4 (375-423)||(27048397-27048445)
chr4 (375-423)||(35399246-35399294)
chr4 (375-423)||(35399405-35399453)
chr4 (373-423)||(52214682-52214732)
chr4 (374-423)||(34205981-34206030)
chr4 (374-423)||(36558454-36558503)
chr4 (374-423)||(53740249-53740298)
chr4 (375-423)||(17077133-17077181)
chr4 (375-423)||(23018537-23018585)
chr4 (375-423)||(28395244-28395292)
chr4 (375-423)||(29669352-29669400)
chr4 (375-423)||(45427241-45427289)
chr4 (375-423)||(50858079-50858127)
chr4 (375-423)||(51470550-51470598)
chr4 (374-417)||(17076928-17076971)
chr4 (376-423)||(43972422-43972469)
chr4 (375-421)||(50858394-50858440)
chr4 (374-423)||(991271-991320)
chr4 (374-423)||(29734628-29734677)
chr4 (375-423)||(990614-990662)
chr4 (375-423)||(5488434-5488482)
chr4 (375-423)||(12016672-12016720)
chr4 (375-423)||(12016880-12016928)
chr4 (375-423)||(15665220-15665268)
chr4 (375-423)||(21498598-21498646)
chr4 (375-423)||(27048126-27048174)
chr4 (375-423)||(29113516-29113564)
chr4 (375-423)||(43943740-43943788)
chr4 (375-423)||(51469548-51469596)
chr4 (375-419)||(51470715-51470759)
chr4 (376-423)||(45426926-45426973)
chr4 (374-423)||(41176773-41176823)
chr4 (375-421)||(53739935-53739981)
chr4 (374-420)||(54210447-54210493)
chr4 (374-423)||(17222655-17222704)
chr4 (378-423)||(18435918-18435963)
chr4 (375-423)||(21497671-21497720)
chr4 (375-423)||(21498254-21498303)
chr4 (374-423)||(22867151-22867200)
chr4 (375-423)||(6778665-6778713)
chr4 (375-423)||(13254450-13254498)
chr4 (375-423)||(27634315-27634363)
chr4 (375-423)||(28245855-28245903)
chr4 (375-423)||(29669667-29669715)
chr4 (375-423)||(34206244-34206292)
chr4 (374-422)||(35565146-35565193)
chr4 (375-423)||(53738197-53738245)
chr4 (377-421)||(56509678-56509722)
[»] chr3 (52 HSPs)
chr3 (374-423)||(41380790-41380839)
chr3 (375-423)||(38300272-38300320)
chr3 (371-423)||(51338388-51338440)
chr3 (374-423)||(22407429-22407478)
chr3 (374-423)||(40230423-40230472)
chr3 (375-423)||(9264075-9264123)
chr3 (375-423)||(9264282-9264330)
chr3 (375-423)||(22407637-22407685)
chr3 (375-423)||(40230628-40230676)
chr3 (375-423)||(44573706-44573754)
chr3 (375-423)||(44574003-44574051)
chr3 (375-423)||(50338371-50338419)
chr3 (375-423)||(50692390-50692438)
chr3 (375-423)||(50692593-50692641)
chr3 (375-423)||(51642417-51642465)
chr3 (375-423)||(51642624-51642672)
chr3 (377-423)||(4191113-4191159)
chr3 (374-423)||(3985840-3985889)
chr3 (374-423)||(4029632-4029681)
chr3 (375-420)||(4255807-4255852)
chr3 (375-420)||(4255989-4256034)
chr3 (374-423)||(21750542-21750591)
chr3 (374-423)||(27219396-27219445)
chr3 (374-423)||(34715443-34715492)
chr3 (374-423)||(45443347-45443396)
chr3 (375-423)||(21832188-21832236)
chr3 (379-423)||(31563996-31564040)
chr3 (375-422)||(33909821-33909869)
chr3 (375-423)||(39078760-39078808)
chr3 (375-423)||(39956663-39956711)
chr3 (375-419)||(48685301-48685345)
chr3 (375-423)||(50057096-50057144)
chr3 (376-423)||(38422050-38422097)
chr3 (375-420)||(4255580-4255625)
chr3 (375-420)||(9264489-9264534)
chr3 (374-423)||(39956455-39956504)
chr3 (374-423)||(47833641-47833690)
chr3 (374-423)||(49477601-49477650)
chr3 (375-423)||(11414430-11414478)
chr3 (375-423)||(19820517-19820565)
chr3 (375-419)||(21833595-21833639)
chr3 (375-423)||(22339808-22339856)
chr3 (375-423)||(24539221-24539269)
chr3 (375-423)||(29369858-29369906)
chr3 (379-423)||(31563692-31563736)
chr3 (375-423)||(37058760-37058808)
chr3 (375-423)||(37223642-37223690)
chr3 (375-423)||(38300741-38300789)
chr3 (375-423)||(49477394-49477442)
chr3 (375-423)||(50203846-50203894)
chr3 (379-415)||(53761391-53761427)
chr3 (375-423)||(54591454-54591502)
[»] chr8 (26 HSPs)
chr8 (375-423)||(40902382-40902430)
chr8 (374-423)||(32931468-32931517)
chr8 (375-423)||(10989023-10989071)
chr8 (375-423)||(10989230-10989278)
chr8 (375-423)||(16454624-16454672)
chr8 (375-423)||(18905923-18905971)
chr8 (375-423)||(36997233-36997281)
chr8 (375-423)||(43599378-43599426)
chr8 (374-423)||(34248426-34248475)
chr8 (374-423)||(36993935-36993984)
chr8 (375-423)||(3183900-3183948)
chr8 (375-423)||(8559648-8559696)
chr8 (375-423)||(15010810-15010858)
chr8 (375-423)||(15011018-15011066)
chr8 (375-423)||(20760649-20760697)
chr8 (375-423)||(21653394-21653442)
chr8 (375-423)||(21653871-21653919)
chr8 (375-419)||(43984305-43984349)
chr8 (381-423)||(34248144-34248186)
chr8 (375-421)||(40754513-40754559)
chr8 (374-423)||(22451415-22451464)
chr8 (375-423)||(20298505-20298553)
chr8 (375-423)||(21085137-21085185)
chr8 (375-423)||(22277591-22277639)
chr8 (375-423)||(30176453-30176501)
chr8 (375-423)||(36039783-36039831)
[»] chr5 (36 HSPs)
chr5 (373-423)||(34457370-34457420)
chr5 (375-423)||(2908758-2908806)
chr5 (375-423)||(3762973-3763021)
chr5 (375-423)||(12965235-12965283)
chr5 (375-423)||(13413651-13413699)
chr5 (375-423)||(13843764-13843812)
chr5 (375-423)||(24994136-24994184)
chr5 (375-423)||(34457163-34457211)
chr5 (375-423)||(38131831-38131879)
chr5 (375-423)||(40169030-40169078)
chr5 (375-417)||(3015406-3015448)
chr5 (377-423)||(24918228-24918274)
chr5 (377-423)||(28358026-28358072)
chr5 (374-423)||(2908550-2908599)
chr5 (375-423)||(48300-48348)
chr5 (375-423)||(873685-873733)
chr5 (375-423)||(3015610-3015658)
chr5 (375-423)||(24125129-24125177)
chr5 (375-423)||(27760142-27760190)
chr5 (375-423)||(28156097-28156145)
chr5 (375-423)||(35526977-35527025)
chr5 (375-423)||(35527263-35527311)
chr5 (375-423)||(38376798-38376846)
chr5 (379-423)||(38663314-38663358)
chr5 (380-423)||(37995628-37995671)
chr5 (375-421)||(40168848-40168894)
chr5 (374-423)||(21633505-21633554)
chr5 (374-423)||(21641752-21641801)
chr5 (374-423)||(30870873-30870922)
chr5 (374-423)||(39205653-39205701)
chr5 (375-423)||(11632498-11632546)
chr5 (375-423)||(18914357-18914405)
chr5 (375-423)||(27760442-27760490)
chr5 (379-423)||(29432479-29432523)
chr5 (379-423)||(43490209-43490253)
chr5 (375-423)||(43490452-43490500)
[»] chr6 (26 HSPs)
chr6 (374-423)||(1744830-1744879)
chr6 (374-423)||(16876818-16876867)
chr6 (374-423)||(24055097-24055146)
chr6 (375-423)||(16876999-16877047)
chr6 (375-423)||(28149860-28149908)
chr6 (374-423)||(10418326-10418375)
chr6 (378-423)||(10733430-10733475)
chr6 (378-423)||(12124889-12124934)
chr6 (374-423)||(19054560-19054609)
chr6 (374-423)||(19712392-19712441)
chr6 (379-423)||(8144084-8144128)
chr6 (375-423)||(11313371-11313419)
chr6 (375-423)||(12134472-12134520)
chr6 (375-423)||(15101100-15101148)
chr6 (375-423)||(17147894-17147942)
chr6 (375-423)||(24558855-24558903)
chr6 (379-423)||(27914319-27914363)
chr6 (375-418)||(11316915-11316958)
chr6 (377-423)||(24558650-24558696)
chr6 (375-420)||(16590254-16590299)
chr6 (375-420)||(16605081-16605126)
chr6 (374-419)||(17096686-17096731)
chr6 (375-423)||(19712598-19712646)
chr6 (374-422)||(21067045-21067093)
chr6 (374-422)||(21088836-21088884)
chr6 (375-423)||(30539302-30539350)
[»] chr2 (38 HSPs)
chr2 (374-423)||(25441763-25441812)
chr2 (374-423)||(42768322-42768371)
chr2 (374-423)||(43195851-43195900)
chr2 (375-423)||(21214190-21214238)
chr2 (375-423)||(32667250-32667298)
chr2 (375-423)||(33985760-33985808)
chr2 (377-423)||(29684078-29684124)
chr2 (373-423)||(34775424-34775474)
chr2 (375-423)||(884124-884173)
chr2 (374-423)||(901990-902039)
chr2 (374-423)||(25441914-25441963)
chr2 (374-423)||(25621273-25621322)
chr2 (374-423)||(40010041-40010090)
chr2 (375-423)||(3976460-3976508)
chr2 (375-423)||(5424771-5424819)
chr2 (375-423)||(6183355-6183403)
chr2 (375-423)||(12431965-12432013)
chr2 (375-423)||(20998978-20999026)
chr2 (375-423)||(23054393-23054441)
chr2 (383-423)||(30156275-30156315)
chr2 (375-423)||(32975318-32975366)
chr2 (380-423)||(7877911-7877954)
chr2 (380-423)||(17727471-17727514)
chr2 (375-420)||(3976992-3977037)
chr2 (378-423)||(11969119-11969164)
chr2 (390-423)||(14408056-14408089)
chr2 (375-423)||(25286248-25286297)
chr2 (375-423)||(30160394-30160443)
chr2 (374-423)||(31761398-31761447)
chr2 (386-423)||(35734859-35734896)
chr2 (374-411)||(44403929-44403966)
chr2 (375-423)||(883917-883965)
chr2 (375-423)||(3435475-3435523)
chr2 (377-421)||(10429808-10429852)
chr2 (375-423)||(16007044-16007092)
chr2 (375-423)||(29923366-29923413)
chr2 (375-423)||(31761199-31761247)
chr2 (387-423)||(37253276-37253312)
[»] chr7 (19 HSPs)
chr7 (375-423)||(1663593-1663641)
chr7 (375-423)||(6783105-6783153)
chr7 (375-423)||(23396676-23396724)
chr7 (375-423)||(41670900-41670948)
chr7 (374-423)||(43288599-43288648)
chr7 (375-423)||(1661180-1661228)
chr7 (375-423)||(28910099-28910147)
chr7 (375-423)||(28910232-28910280)
chr7 (374-421)||(23396883-23396930)
chr7 (377-423)||(257258-257304)
chr7 (377-423)||(40703402-40703448)
chr7 (374-423)||(6959954-6960003)
chr7 (374-423)||(8585158-8585207)
chr7 (375-423)||(6813272-6813320)
chr7 (387-423)||(14595882-14595918)
chr7 (375-423)||(23821665-23821713)
chr7 (375-423)||(31374832-31374880)
chr7 (387-423)||(39079637-39079673)
chr7 (375-419)||(40121607-40121651)
[»] chr1 (39 HSPs)
chr1 (375-423)||(19481381-19481429)
chr1 (375-423)||(20735589-20735637)
chr1 (375-423)||(29273055-29273103)
chr1 (375-423)||(29273214-29273262)
chr1 (373-423)||(31305778-31305828)
chr1 (373-423)||(48558308-48558358)
chr1 (374-423)||(15392171-15392220)
chr1 (374-423)||(33879766-33879815)
chr1 (374-423)||(33964440-33964489)
chr1 (374-423)||(35926236-35926285)
chr1 (375-423)||(2104250-2104297)
chr1 (375-423)||(2997045-2997093)
chr1 (375-423)||(4022114-4022162)
chr1 (375-419)||(9380971-9381015)
chr1 (375-423)||(9381166-9381214)
chr1 (376-420)||(15392095-15392139)
chr1 (375-423)||(17419854-17419902)
chr1 (375-423)||(29272896-29272944)
chr1 (375-423)||(39649073-39649121)
chr1 (375-423)||(52846838-52846886)
chr1 (375-423)||(463071-463120)
chr1 (374-423)||(13959469-13959518)
chr1 (374-423)||(15013592-15013641)
chr1 (390-423)||(19609189-19609222)
chr1 (374-423)||(26366821-26366869)
chr1 (374-423)||(35024448-35024497)
chr1 (374-423)||(43361540-43361589)
chr1 (374-423)||(45264729-45264778)
chr1 (375-423)||(2697320-2697368)
chr1 (375-423)||(8520082-8520130)
chr1 (383-423)||(11149420-11149460)
chr1 (375-423)||(15391886-15391934)
chr1 (375-423)||(19937032-19937080)
chr1 (375-423)||(20735822-20735870)
chr1 (375-423)||(21638255-21638303)
chr1 (378-418)||(22892680-22892720)
chr1 (375-423)||(37600939-37600987)
chr1 (375-423)||(43423346-43423394)
chr1 (375-423)||(45403507-45403555)
[»] scaffold0060 (2 HSPs)
scaffold0060 (374-423)||(13620-13669)
scaffold0060 (375-423)||(20607-20655)
[»] scaffold0989 (1 HSPs)
scaffold0989 (374-420)||(2935-2981)
[»] scaffold0459 (1 HSPs)
scaffold0459 (374-411)||(13377-13414)
[»] scaffold0366 (2 HSPs)
scaffold0366 (374-411)||(11018-11055)
scaffold0366 (374-411)||(14684-14721)
[»] scaffold0029 (1 HSPs)
scaffold0029 (374-423)||(76919-76968)
[»] scaffold0729 (1 HSPs)
scaffold0729 (375-423)||(2543-2591)
[»] scaffold0434 (1 HSPs)
scaffold0434 (375-423)||(13373-13421)
[»] scaffold0419 (1 HSPs)
scaffold0419 (375-423)||(4228-4276)


Alignment Details
Target: chr4 (Bit Score: 276; Significance: 1e-154; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 108 - 423
Target Start/End: Complemental strand, 3047860 - 3047546
Alignment:
Q  108 tttggttaaaaacggaaaagtaatcatgtgagcttgccgaaagaggaagtatggtttccaaattcttgtttttggtcgtacaaatgattgttgtatagcc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3047860 tttggttaaaaacggaaaagtaatcatgtgagcttgccgaaagaggaagtatagtttccaaattcttgtttttggtcgtacaaatgattgttgtatagcc 3047761  T
Q  208 ataattccttttctaattccttttgttagatgtcactcacactccatactttgatgttttagccttttaattttgtttcaaagctgttgaatttttaaat 307  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3047760 ataattctttttctaattccttttgttagatgtcactcacactccatactttgatgttttagcc-tttaattttgtttcaaagctgttgaatttttaaat 3047662  T
Q  308 tcccaatgtctaaataatgttaatttttcgaaagtgagaaagaaagaacttgtttgatagatatccttgttgaaatttgggacctaacttaaccttacaa 407  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  3047661 tcccaatgtctaaattatgttaatttttcgaaagtgagaaagaaagaacttgtttgatagatacccttgttgaaatttgggatctaacttaaccttacaa 3047562  T
Q  408 aaccggcttgtaaggt 423  Q
    ||| | ||| ||||||    
T  3047561 aactgacttataaggt 3047546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 3047953 - 3047912
Alignment:
Q  18 aacacaagaaggacatactcaactcaagcaattatgctttgt 59  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3047953 aacacaagaaggacatactcaactcaagcaattatgctttgt 3047912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 25753594 - 25753642
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25753594 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggt 25753642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 27048397 - 27048445
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  27048397 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggt 27048445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 35399246 - 35399294
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  35399246 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgtaaggt 35399294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 35399405 - 35399453
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  35399405 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgtaaggt 35399453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 52214732 - 52214682
Alignment:
Q  373 cttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  52214732 cttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 52214682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 34205981 - 34206030
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  34205981 ttgttgaaatttgggacctaactcatccttacaaaaccagcttgtaaggt 34206030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 36558454 - 36558503
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  36558454 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 36558503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 53740298 - 53740249
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  53740298 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 53740249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 17077133 - 17077181
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  17077133 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgcaaggt 17077181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 23018585 - 23018537
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  23018585 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 23018537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 28395292 - 28395244
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  28395292 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 28395244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 29669352 - 29669400
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  29669352 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 29669400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 45427241 - 45427289
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  45427241 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 45427289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 50858127 - 50858079
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  50858127 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 50858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 51470598 - 51470550
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  51470598 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 51470550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 417
Target Start/End: Original strand, 17076928 - 17076971
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttg 417  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  17076928 ttgttgaaatttggggcctaactcaaccttacaaaaccggcttg 17076971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 423
Target Start/End: Complemental strand, 43972469 - 43972422
Alignment:
Q  376 gttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  43972469 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 43972422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 50858440 - 50858394
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaag 421  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||    
T  50858440 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaag 50858394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 991320 - 991271
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  991320 ttgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggt 991271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 29734677 - 29734628
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| || |||| | ||||||||||||||||||||||||    
T  29734677 ttgttgaaatttggggcccaactcatccttacaaaaccggcttgtaaggt 29734628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 990662 - 990614
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  990662 tgttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggt 990614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 5488482 - 5488434
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | ||||||||||||||||||||||||    
T  5488482 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggt 5488434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 12016672 - 12016720
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  12016672 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 12016720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 12016880 - 12016928
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  12016880 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 12016928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 15665268 - 15665220
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | ||||||||||||||||||||||||    
T  15665268 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggt 15665220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 21498646 - 21498598
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  21498646 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 21498598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 27048126 - 27048174
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||||||||||||||| |||||    
T  27048126 tgttgaaatttggggcctaactcatccttacaaaaccggcttgcaaggt 27048174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 29113564 - 29113516
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  29113564 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggt 29113516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 43943788 - 43943740
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  43943788 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 43943740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 51469596 - 51469548
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||| ||||||||||||||||    
T  51469596 tgttgaaatttggggcctaactcatccttacacaaccggcttgtaaggt 51469548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 419
Target Start/End: Complemental strand, 51470759 - 51470715
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgta 419  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||    
T  51470759 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 51470715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 376 - 423
Target Start/End: Original strand, 45426926 - 45426973
Alignment:
Q  376 gttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  45426926 gttgaaatttggggcctaactcatccttacaaaaccgacttgtaaggt 45426973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 41176823 - 41176773
Alignment:
Q  374 ttgttgaaattt-gggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  41176823 ttgttgaaattttggggcctaactcatccttacaaaaccggcttgtaaggt 41176773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 53739981 - 53739935
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaag 421  Q
    |||||||||||||| ||||| | | ||||||||||||||||||||||    
T  53739981 tgttgaaatttggggcctaaatcatccttacaaaaccggcttgtaag 53739935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 420
Target Start/End: Complemental strand, 54210493 - 54210447
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    |||||| |||||||| ||||||| | |||||||||||||||||||||    
T  54210493 ttgttgtaatttggggcctaactcatccttacaaaaccggcttgtaa 54210447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 17222655 - 17222704
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||  | ||||||||||||||||||| ||||    
T  17222655 ttgttgaaatttggggcctaacacatccttacaaaaccggcttgtgaggt 17222704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 18435918 - 18435963
Alignment:
Q  378 tgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||    
T  18435918 tgaaatttggggcctaacacatccttacaaaaccggcttgtaaggt 18435963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 21497671 - 21497720
Alignment:
Q  375 tgttgaaattt-gggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  21497671 tgttgaaattttggggcctaactcatccttacaaaaccggcttgtaaggt 21497720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 21498303 - 21498254
Alignment:
Q  375 tgttgaaattt-gggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  21498303 tgttgaaattttggggcctaactcatccttacaaaaccggcttgtaaggt 21498254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 22867200 - 22867151
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||  ||||  ||||||||||||||||||||    
T  22867200 ttgttgaaatttggggcctaacacaaccccacaaaaccggcttgtaaggt 22867151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 6778665 - 6778713
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| |  |||||| ||||||||||||||||||||| ||||    
T  6778665 tgttgaaatttgaggtctaactcaaccttacaaaaccggcttgtgaggt 6778713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 13254498 - 13254450
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| |  ||||||||||||| |||||||||    
T  13254498 tgttgaaatttggggcctaactcatgcttacaaaaccgggttgtaaggt 13254450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 27634315 - 27634363
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | |||||||||| |||||||||||||    
T  27634315 tgttgtaatttggggcctaactcatccttacaaaatcggcttgtaaggt 27634363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 28245903 - 28245855
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | |||||||||||||||||| |||||    
T  28245903 tgttgaaattgggggcctaactcatccttacaaaaccggcttgcaaggt 28245855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 29669667 - 29669715
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||   ||||| | ||||||||||||||||||||||||    
T  29669667 tgttgaaatttggggtttaactcatccttacaaaaccggcttgtaaggt 29669715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 34206244 - 34206292
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||| ||||||| ||||||| | |||||| |||||||||||||||||    
T  34206244 tgttgagatttggggcctaactcatccttacgaaaccggcttgtaaggt 34206292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 422
Target Start/End: Complemental strand, 35565193 - 35565146
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaagg 422  Q
    ||||||||||||| | ||||||| | |||||||||||||||||||||||    
T  35565193 ttgttgaaatttgag-cctaactcatccttacaaaaccggcttgtaagg 35565146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 53738197 - 53738245
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||| | | ||||||||||| ||||||||||||    
T  53738197 tgttgaaatttggggcctaagtcatccttacaaaactggcttgtaaggt 53738245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 56509722 - 56509678
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaag 421  Q
    |||||||||||| ||||||| | || |||||||||||||||||||    
T  56509722 ttgaaatttggggcctaactcatccgtacaaaaccggcttgtaag 56509678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 41380839 - 41380790
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  41380839 ttgttgaaatttggggcctaactcaaccttacaaaaccggcttgtaaggt 41380790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 38300272 - 38300320
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  38300272 tgttgaaatttgggacctaactcatccttacaaaaccggcttgtaaggt 38300320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 51338388 - 51338440
Alignment:
Q  371 tccttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  51338388 tccttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 51338440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 22407429 - 22407478
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  22407429 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 22407478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 40230423 - 40230472
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  40230423 ttgttgaaatttggggcctaactcaaccttacaaaaccggctcgtaaggt 40230472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 9264075 - 9264123
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  9264075 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 9264123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 9264282 - 9264330
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  9264282 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 9264330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 22407637 - 22407685
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  22407637 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 22407685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 40230628 - 40230676
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  40230628 tgttgaaatttggggcttaactcaaccttacaaaaccggcttgtaaggt 40230676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 44573754 - 44573706
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  44573754 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 44573706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 44574051 - 44574003
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  44574051 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 44574003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 50338371 - 50338419
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  50338371 tgttgaaatttggggtctaactcaaccttacaaaaccggcttgtaaggt 50338419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 50692438 - 50692390
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  50692438 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 50692390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 50692641 - 50692593
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  50692641 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 50692593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 51642417 - 51642465
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  51642417 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 51642465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 51642624 - 51642672
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  51642624 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 51642672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 4191113 - 4191159
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||||||| | ||||||||||||||||||||||||    
T  4191113 ttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 4191159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 3985889 - 3985840
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||| |||||| ||||||| | ||||||||||||||||||||||||    
T  3985889 ttgttgaagtttggggcctaactcatccttacaaaaccggcttgtaaggt 3985840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 4029632 - 4029681
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | |||||||||||||| |||||||||    
T  4029632 ttgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggt 4029681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 420
Target Start/End: Complemental strand, 4255852 - 4255807
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||    
T  4255852 tgttgaaatttgggtcctaactcatccttacaaaaccggcttgtaa 4255807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 420
Target Start/End: Complemental strand, 4256034 - 4255989
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    |||||||||||||| ||||||| | |||||||||||||||||||||    
T  4256034 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaa 4255989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 21750591 - 21750542
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||| ||||||||||||    
T  21750591 ttgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggt 21750542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 27219445 - 27219396
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| | ||| ||| ||||||||||||||||||||||||    
T  27219445 ttgttgaaatttggggcataagttatccttacaaaaccggcttgtaaggt 27219396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 34715443 - 34715492
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  34715443 ttgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggt 34715492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 45443396 - 45443347
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  45443396 ttgttgaaatttggggcctaactcatccttaaaaaaccggcttgtaaggt 45443347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 21832188 - 21832236
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||| ||||    
T  21832188 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggt 21832236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 423
Target Start/End: Original strand, 31563996 - 31564040
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||    
T  31563996 gaaatttggggcctaactcaactttacaaaaccggcttgtaaggt 31564040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 422
Target Start/End: Original strand, 33909821 - 33909869
Alignment:
Q  375 tgttgaaatttggga-cctaacttaaccttacaaaaccggcttgtaagg 422  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  33909821 tgttgaaatttgggagcctaactcatccttacaaaaccggcttgtaagg 33909869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 39078760 - 39078808
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  39078760 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 39078808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 39956663 - 39956711
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||  ||||||| | ||||||||||||||||||||||||    
T  39956663 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggt 39956711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 419
Target Start/End: Original strand, 48685301 - 48685345
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgta 419  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||    
T  48685301 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 48685345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 50057144 - 50057096
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||| ||||||||||||    
T  50057144 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggt 50057096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 376 - 423
Target Start/End: Complemental strand, 38422097 - 38422050
Alignment:
Q  376 gttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||  |||||| |||||||||||| |||||||||||||    
T  38422097 gttgaaatttggggtctaactcaaccttacaaaatcggcttgtaaggt 38422050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 420
Target Start/End: Complemental strand, 4255625 - 4255580
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    |||||||||||||| ||||||| | |||| ||||||||||||||||    
T  4255625 tgttgaaatttggggcctaactcatccttgcaaaaccggcttgtaa 4255580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 9264489 - 9264534
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    ||||| |||||||| ||||||| | |||||||||||||||||||||    
T  9264489 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaa 9264534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 39956455 - 39956504
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||| | | ||||||||||| ||||||||||||    
T  39956455 ttgttgaaatttggggcctaattcatccttacaaaactggcttgtaaggt 39956504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 47833641 - 47833690
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||| | | |||||||||||| |||||||||||    
T  47833641 ttgttgaaatttggggcctaaatcatccttacaaaaccagcttgtaaggt 47833690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 49477650 - 49477601
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||| || ||||| ||||||| | ||||||||||||||||||||||||    
T  49477650 ttgttgtaaattggggcctaactcatccttacaaaaccggcttgtaaggt 49477601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 11414478 - 11414430
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | ||||||||||||||||| ||||||    
T  11414478 tgttgaaatttgaggcctaactcatccttacaaaaccggcttctaaggt 11414430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 19820517 - 19820565
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | |||||||||||||| |||||||||    
T  19820517 tgttgaaatttgaggcctaactcatccttacaaaaccggtttgtaaggt 19820565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 419
Target Start/End: Complemental strand, 21833639 - 21833595
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgta 419  Q
    |||||||||||||| ||||||| | |||||| |||||||||||||    
T  21833639 tgttgaaatttggggcctaactcatccttacgaaaccggcttgta 21833595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 22339856 - 22339808
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||| ||||||||||    
T  22339856 tgttgaaattgggggcctaactcatccttacaaaaccgacttgtaaggt 22339808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 24539269 - 24539221
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||| |||||| ||||||| | |||||||||| |||||||||||||    
T  24539269 tgttgaagtttggggcctaactcatccttacaaaatcggcttgtaaggt 24539221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 29369906 - 29369858
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | |||||| |||||||||||||||||    
T  29369906 tgttgaaattcggggcctaactcatccttactaaaccggcttgtaaggt 29369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 423
Target Start/End: Original strand, 31563692 - 31563736
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||  |||||| ||||||||||||||||||| ||||||    
T  31563692 gaaatttgggggctaactcaaccttacaaaaccggcttctaaggt 31563736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 37058760 - 37058808
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| || ||||||| | |||||||||||||| |||||||||    
T  37058760 tgttgaaattttgggcctaactcatccttacaaaaccggtttgtaaggt 37058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 37223690 - 37223642
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||  |||||||   ||||||||||||||||||||||||    
T  37223690 tgttgaaatttggagcctaactcttccttacaaaaccggcttgtaaggt 37223642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 38300741 - 38300789
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | || |||||||||||||||||||||    
T  38300741 tgttgaaatttgaggcctaactcatccgtacaaaaccggcttgtaaggt 38300789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 49477442 - 49477394
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| || ||||| ||||||| | ||||||||||||||||||||||||    
T  49477442 tgttgtaaattggggcctaactcatccttacaaaaccggcttgtaaggt 49477394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 50203846 - 50203894
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||||||||||| || ||||||    
T  50203846 tgttgaaatttggggcctaactcatccttacaaaaccggtttataaggt 50203894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 415
Target Start/End: Original strand, 53761391 - 53761427
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggct 415  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  53761391 gaaatttggggcctaactcaaccttacaaaaccggct 53761427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 54591454 - 54591502
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| |  |||||||||||||||||||||||    
T  54591454 tgttgaaatttggggtctaactcatgcttacaaaaccggcttgtaaggt 54591502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 40902382 - 40902430
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  40902382 tgttgaaatttggggcctaacttatccttacaaaaccggcttgtaaggt 40902430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 32931517 - 32931468
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  32931517 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 32931468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 10989023 - 10989071
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  10989023 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 10989071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 10989230 - 10989278
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  10989230 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 10989278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 16454624 - 16454672
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  16454624 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 16454672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 18905971 - 18905923
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  18905971 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 18905923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 36997281 - 36997233
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  36997281 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 36997233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 43599426 - 43599378
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  43599426 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 43599378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 34248475 - 34248426
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||    
T  34248475 ttgtagaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 34248426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 36993935 - 36993984
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||| | ||||||| | ||||||||||||||||||||||||    
T  36993935 ttgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggt 36993984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 3183900 - 3183948
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | | ||||||||||||||||||||||    
T  3183900 tgttgaaatttggggcctaactcatcgttacaaaaccggcttgtaaggt 3183948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 8559696 - 8559648
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  8559696 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 8559648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 15010810 - 15010858
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||| ||||||||||||||||||    
T  15010810 tgttgaaatttggggcctaactcatccttataaaaccggcttgtaaggt 15010858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 15011018 - 15011066
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  15011018 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggt 15011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 20760649 - 20760697
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||||||||||| |||||||||    
T  20760649 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggt 20760697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 21653442 - 21653394
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||  ||||||| | ||||||||||||||||||||||||    
T  21653442 tgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggt 21653394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 21653919 - 21653871
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  21653919 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 21653871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 419
Target Start/End: Original strand, 43984305 - 43984349
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgta 419  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||    
T  43984305 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 43984349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 423
Target Start/End: Complemental strand, 34248186 - 34248144
Alignment:
Q  381 aatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||| ||||||| | ||||||||||||||||||||||||    
T  34248186 aatttggggcctaactcatccttacaaaaccggcttgtaaggt 34248144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 421
Target Start/End: Complemental strand, 40754559 - 40754513
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaag 421  Q
    |||||||||||||| ||||||||| | |||||||||| |||||||||    
T  40754559 tgttgaaatttggggcctaacttatctttacaaaaccagcttgtaag 40754513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 22451464 - 22451415
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| | ||||| | ||||||||||||||||||| ||||    
T  22451464 ttgttgaaatttggggcataactcatccttacaaaaccggcttgtgaggt 22451415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 20298505 - 20298553
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | | |||||||||| |||||||||||    
T  20298505 tgttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggt 20298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 21085137 - 21085185
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | | |||||||||| |||||||||||    
T  21085137 tgttgaaatttggggcctaactcatcattacaaaaccagcttgtaaggt 21085185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 22277639 - 22277591
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||   ||||| | ||||||||||||||||||||||||    
T  22277639 tgttgaaatttggggattaactcatccttacaaaaccggcttgtaaggt 22277591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 30176453 - 30176501
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||| ||||    
T  30176453 tgttgaaattcggggcctaactcatccttacaaaaccggcttgtgaggt 30176501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 36039783 - 36039831
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | ||||||||||||||||||| ||||    
T  36039783 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtgaggt 36039831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 34457420 - 34457370
Alignment:
Q  373 cttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  34457420 cttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 34457370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 2908758 - 2908806
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  2908758 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 2908806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 3763021 - 3762973
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  3763021 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 3762973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 12965235 - 12965283
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  12965235 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 12965283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 13413699 - 13413651
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  13413699 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 13413651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 13843812 - 13843764
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  13843812 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 13843764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 24994184 - 24994136
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  24994184 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 24994136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 34457211 - 34457163
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  34457211 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 34457163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 38131879 - 38131831
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  38131879 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 38131831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 40169030 - 40169078
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  40169030 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 40169078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 417
Target Start/End: Original strand, 3015406 - 3015448
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttg 417  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  3015406 tgttgaaatttggggcctaactcaaccttacaaaaccggcttg 3015448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 24918274 - 24918228
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||||||| | ||||||||||||||||||||||||    
T  24918274 ttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 24918228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 28358026 - 28358072
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||||||| | ||||||||||||||||||||||||    
T  28358026 ttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 28358072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 2908550 - 2908599
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| ||||||||||| |||||| | ||||||||||||||||||||||||    
T  2908550 ttgtcgaaatttgggatctaactcatccttacaaaaccggcttgtaaggt 2908599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 48300 - 48348
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  48300 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 48348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 873685 - 873733
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  873685 tgttgaaatttggggcctaactcatccttacaaaacctgcttgtaaggt 873733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 3015610 - 3015658
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| || ||||||| |||||||||||||||||||| |||||    
T  3015610 tgttgaaatttagggcctaactcaaccttacaaaaccggcttgcaaggt 3015658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 24125177 - 24125129
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  24125177 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggt 24125129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 27760190 - 27760142
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | | ||||| ||||||||||||||||||||||||||    
T  27760190 tgttgaaatttgaggcttaactcaaccttacaaaaccggcttgtaaggt 27760142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 28156145 - 28156097
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||| | | ||||||||||||||||||||||||    
T  28156145 tgttgaaatttggggcctaattcatccttacaaaaccggcttgtaaggt 28156097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 35526977 - 35527025
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  35526977 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 35527025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 35527263 - 35527311
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  35527263 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 35527311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 38376846 - 38376798
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  38376846 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 38376798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 423
Target Start/End: Complemental strand, 38663358 - 38663314
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||    
T  38663358 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 38663314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 380 - 423
Target Start/End: Original strand, 37995628 - 37995671
Alignment:
Q  380 aaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||    
T  37995628 aaatttggggcctaactcatccttacaaaaccggcttgtaaggt 37995671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 421
Target Start/End: Original strand, 40168848 - 40168894
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaag 421  Q
    |||||||||||||| ||||||| | |||||||||||| |||||||||    
T  40168848 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaag 40168894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 21633505 - 21633554
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| ||||| ||| ||||||| |||||||||||||||| |||||||||    
T  21633505 ttgttaaaattgggggcctaactcaaccttacaaaaccggtttgtaaggt 21633554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 21641752 - 21641801
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| ||||| ||| ||||||| |||||||||||||||| |||||||||    
T  21641752 ttgttaaaattgggggcctaactcaaccttacaaaaccggtttgtaaggt 21641801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 30870873 - 30870922
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| || ||||| ||||||| ||||||||||| ||||||    
T  30870873 ttgttgaaatttggaacttaactcaaccttataaaaccggcttataaggt 30870922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 39205653 - 39205701
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||| ||||||    
T  39205653 ttgttgaaatttggg-cctaactcatccttacaaaaccggcttttaaggt 39205701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 11632546 - 11632498
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| || |||| | ||||||||||||||||| ||||||    
T  11632546 tgttgaaatttggggcccaactcatccttacaaaaccggcttataaggt 11632498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 18914357 - 18914405
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| |  ||||||||||| |||||||||||    
T  18914357 tgttgaaatttggggcctaactcattcttacaaaaccagcttgtaaggt 18914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 27760490 - 27760442
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | |||||||||||||||||| |||||    
T  27760490 tgttgaaatttggggtctaactcatccttacaaaaccggcttggaaggt 27760442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 423
Target Start/End: Complemental strand, 29432523 - 29432479
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||| | ||||||| | ||||||||||||||||||||||||    
T  29432523 gaaatttgtggcctaactcatccttacaaaaccggcttgtaaggt 29432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 423
Target Start/End: Original strand, 43490209 - 43490253
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||| | ||| ||||||||||||||||||||    
T  43490209 gaaatttggggcctaactcatcctcacaaaaccggcttgtaaggt 43490253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 43490452 - 43490500
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | |||||||||||||||||| |||||    
T  43490452 tgttgaaattgggggcctaactcatccttacaaaaccggcttggaaggt 43490500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 1744830 - 1744879
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  1744830 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 1744879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 16876818 - 16876867
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  16876818 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 16876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 24055097 - 24055146
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  24055097 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 24055146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 16876999 - 16877047
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  16876999 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 16877047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 28149908 - 28149860
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  28149908 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 28149860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 10418326 - 10418375
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  10418326 ttgttggaatttggggcctaactcatccttacaaaaccggcttgtaaggt 10418375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 10733430 - 10733475
Alignment:
Q  378 tgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||    
T  10733430 tgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 10733475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 12124889 - 12124934
Alignment:
Q  378 tgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||    
T  12124889 tgaaatttggggcctaacttatccttacaaaaccgacttgtaaggt 12124934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 19054609 - 19054560
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  19054609 ttgttgaaatttggggactaactcatccttacaaaaccggcttgtaaggt 19054560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 19712392 - 19712441
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | |||||||||| |||||||||||||    
T  19712392 ttgttgaaatttggggcctaactcatccttacaaaatcggcttgtaaggt 19712441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 423
Target Start/End: Complemental strand, 8144128 - 8144084
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||    
T  8144128 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 8144084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 11313371 - 11313419
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||| ||||||||||||    
T  11313371 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggt 11313419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 12134472 - 12134520
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||||||||||| |||||||||    
T  12134472 tgttgaaatttggggcctaactcatccttacaaaaccggtttgtaaggt 12134520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 15101100 - 15101148
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  15101100 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 15101148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 17147894 - 17147942
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | ||||||||||||||||||||||||    
T  17147894 tgttgaaatttgtggcctaactcatccttacaaaaccggcttgtaaggt 17147942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 24558903 - 24558855
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  24558903 tgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggt 24558855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 423
Target Start/End: Original strand, 27914319 - 27914363
Alignment:
Q  379 gaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||    
T  27914319 gaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 27914363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 375 - 418
Target Start/End: Complemental strand, 11316958 - 11316915
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgt 418  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||    
T  11316958 tgttgaaattgggggcctaactcaaccttacaaaaccggcttgt 11316915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 24558696 - 24558650
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||||||| | ||| ||||||||||||||||||||    
T  24558696 ttgaaatttggggcctaactcatcctcacaaaaccggcttgtaaggt 24558650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 420
Target Start/End: Complemental strand, 16590299 - 16590254
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    ||||||||||||||  |||||| | |||||||||||||||||||||    
T  16590299 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaa 16590254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 16605081 - 16605126
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    ||||||||||||||  |||||| | |||||||||||||||||||||    
T  16605081 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaa 16605126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 17096686 - 17096731
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgta 419  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||    
T  17096686 ttgttgaaatttggggtctaactcatccttacaaaaccggcttgta 17096731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 19712598 - 19712646
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | |||||||||||| |||||||||||    
T  19712598 tgttgtaatttggggcctaactcatccttacaaaaccagcttgtaaggt 19712646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 21067045 - 21067093
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaagg 422  Q
    ||||||||||||||| ||||||  | | |||||||||||||||||||||    
T  21067045 ttgttgaaatttggggcctaacacatctttacaaaaccggcttgtaagg 21067093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 422
Target Start/End: Original strand, 21088836 - 21088884
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaagg 422  Q
    ||||||||||||||| ||||||  | | |||||||||||||||||||||    
T  21088836 ttgttgaaatttggggcctaacacatctttacaaaaccggcttgtaagg 21088884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 30539350 - 30539302
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||  | | ||||||||||||||||||||||||    
T  30539350 tgttgaaatttggggcctagttcatccttacaaaaccggcttgtaaggt 30539302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 25441812 - 25441763
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  25441812 ttgttgaaatttgggtcctaactcatccttacaaaaccggcttgtaaggt 25441763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 42768322 - 42768371
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  42768322 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 42768371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 43195900 - 43195851
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  43195900 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 43195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 21214190 - 21214238
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  21214190 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 21214238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 32667298 - 32667250
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  32667298 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 32667250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 33985760 - 33985808
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  33985760 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 33985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 29684124 - 29684078
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||    
T  29684124 ttgaaatttgggttctaacttatccttacaaaaccggcttgtaaggt 29684078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 34775474 - 34775424
Alignment:
Q  373 cttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  34775474 cttgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 34775424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 884173 - 884124
Alignment:
Q  375 tgttgaaatttggga-cctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||||||||    
T  884173 tgttgaaatttgggggcctaactcaaccttacaaaaccggcttgtaaggt 884124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 902039 - 901990
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||    
T  902039 ttgtagaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 901990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 25441963 - 25441914
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| |||||||   ||||||||||||||||||||||||    
T  25441963 ttgttgaaatttgggtcctaactcgtccttacaaaaccggcttgtaaggt 25441914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 25621273 - 25621322
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  25621273 ttgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 25621322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 40010090 - 40010041
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||  | ||||||||||||||||||||||||    
T  40010090 ttgttgaaatttggggcctaacacatccttacaaaaccggcttgtaaggt 40010041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 3976460 - 3976508
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  3976460 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaaggt 3976508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 5424771 - 5424819
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  5424771 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggt 5424819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 6183355 - 6183403
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  6183355 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggt 6183403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 12432013 - 12431965
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| |||| || | ||||||||||||||||||||||||    
T  12432013 tgttgaaatttggggcctagctcatccttacaaaaccggcttgtaaggt 12431965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 20998978 - 20999026
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  20998978 tgttgaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 20999026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 23054441 - 23054393
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  23054441 tgttgaaatttggggcctaactcatccttacaaaaccgtcttgtaaggt 23054393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 383 - 423
Target Start/End: Complemental strand, 30156315 - 30156275
Alignment:
Q  383 tttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  30156315 tttggggcctaacttatccttacaaaaccggcttgtaaggt 30156275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 32975366 - 32975318
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||||| |||| | ||||||||||| ||||||||||||    
T  32975366 tgttgaaatttgggaccaaactcatccttacaaaactggcttgtaaggt 32975318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 7877954 - 7877911
Alignment:
Q  380 aaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| | | ||||||||||||||||||||||||    
T  7877954 aaatttgggacctaattcatccttacaaaaccggcttgtaaggt 7877911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 17727514 - 17727471
Alignment:
Q  380 aaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||    
T  17727514 aaatttggggcctaactcatccttacaaaaccggcttgtaaggt 17727471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 420
Target Start/End: Original strand, 3976992 - 3977037
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    ||||| |||||||| ||||||| | |||||||||||||||||||||    
T  3976992 tgttgtaatttggggcctaactcatccttacaaaaccggcttgtaa 3977037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 11969164 - 11969119
Alignment:
Q  378 tgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||| || ||||||| | ||||||||||||||||||||||||    
T  11969164 tgaaattttgggcctaactcatccttacaaaaccggcttgtaaggt 11969119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 390 - 423
Target Start/End: Complemental strand, 14408089 - 14408056
Alignment:
Q  390 cctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||| ||||||||||||||||||||||||||    
T  14408089 cctaactcaaccttacaaaaccggcttgtaaggt 14408056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 25286248 - 25286297
Alignment:
Q  375 tgttgaaattt-gggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  25286248 tgttgaaattttggggcctaactcatccttacaaaaccggcttgtaaggt 25286297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 30160443 - 30160394
Alignment:
Q  375 tgttgaaattt-gggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  30160443 tgttgaaattttggggcctaactcatccttacaaaaccggcttgtaaggt 30160394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 31761447 - 31761398
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| | ||||| | |||||||||| |||||||||||||    
T  31761447 ttgttgaaatttggggcttaactcatccttacaaaatcggcttgtaaggt 31761398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 386 - 423
Target Start/End: Original strand, 35734859 - 35734896
Alignment:
Q  386 gggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||  |||||||||||||||||||||    
T  35734859 gggacctaacttaacactacaaaaccggcttgtaaggt 35734896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 411
Target Start/End: Original strand, 44403929 - 44403966
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaacc 411  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  44403929 ttgttgaaatttgggacctaactcatccttacaaaacc 44403966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 883965 - 883917
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| ||||| ||| ||||||| | ||||||||||||||||||||||||    
T  883965 tgttaaaattgggggcctaactcatccttacaaaaccggcttgtaaggt 883917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 3435475 - 3435523
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | |||||||||||||| |||||||||    
T  3435475 tgttgtaatttggggcctaactcatccttacaaaaccggtttgtaaggt 3435523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 10429852 - 10429808
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaag 421  Q
    ||||||||||||  |||||| | ||||||||||||||||||||||    
T  10429852 ttgaaatttggggtctaactcatccttacaaaaccggcttgtaag 10429808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 16007092 - 16007044
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||| ||||||  |||||| | ||||||||||||||||||||||||    
T  16007092 tgttgaactttggggtctaactcatccttacaaaaccggcttgtaaggt 16007044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 29923413 - 29923366
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | |||||| |||||||||||||||||    
T  29923413 tgttgaaatttggggcctaactcatccttac-aaaccggcttgtaaggt 29923366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 31761247 - 31761199
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||  ||||||||||    
T  31761247 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggt 31761199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 37253276 - 37253312
Alignment:
Q  387 ggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  37253276 ggacctaactgaaccttacaaaaccggcttgtgaggt 37253312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 1663593 - 1663641
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  1663593 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 1663641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 6783153 - 6783105
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  6783153 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 6783105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 23396724 - 23396676
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  23396724 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 23396676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 41670948 - 41670900
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  41670948 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 41670900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 43288648 - 43288599
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||    
T  43288648 ttgtcgaaatttggggcctaactaatccttacaaaaccggcttgtaaggt 43288599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 1661180 - 1661228
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| |  |||||||||||||||||||||||    
T  1661180 tgttgaaatttggggcctaactcattcttacaaaaccggcttgtaaggt 1661228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 28910147 - 28910099
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  28910147 tgttgaaatttgggggctaactcatccttacaaaaccggcttgtaaggt 28910099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 28910280 - 28910232
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  28910280 tgttgaaatttgggggctaactcatccttacaaaaccggcttgtaaggt 28910232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 374 - 421
Target Start/End: Complemental strand, 23396930 - 23396883
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaag 421  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||||    
T  23396930 ttgttgaaatttggggtctaactcatccttacaaaaccggcttgtaag 23396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 257258 - 257304
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||||||| | |||||||||||||||| |||||||    
T  257258 ttgaaatttggggcctaactcatccttacaaaaccggctagtaaggt 257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 40703402 - 40703448
Alignment:
Q  377 ttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| ||||||| | ||||||||||||||||||| ||||    
T  40703402 ttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggt 40703448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 6959954 - 6960003
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| |||||||| ||||||||||| ||||||||| || |||||||||||    
T  6959954 ttgtagaaatttgtgacctaacttatccttacaaacccagcttgtaaggt 6960003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 8585207 - 8585158
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||  |||||| | |||||||||||| |||||||||||    
T  8585207 ttgttgaaatttggggtctaactcatccttacaaaaccagcttgtaaggt 8585158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 6813272 - 6813320
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||| ||||    
T  6813272 tgttgaaatttggggcctaacttgtcctcacaaaaccggcttgtgaggt 6813320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 14595882 - 14595918
Alignment:
Q  387 ggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  14595882 ggacctaactcaaccttacaaaaccggcttttaaggt 14595918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 23821665 - 23821713
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||  ||||||||||    
T  23821665 tgttgaaatttggggcctaactcatccttacaaaaccaacttgtaaggt 23821713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 31374880 - 31374832
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| |||  |||||| | ||||||||||||||||||||||||    
T  31374880 tgttgaaattcggggtctaactcatccttacaaaaccggcttgtaaggt 31374832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 423
Target Start/End: Original strand, 39079637 - 39079673
Alignment:
Q  387 ggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  39079637 ggacctaactcaaccttacaaaaccggcttgttaggt 39079673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 419
Target Start/End: Original strand, 40121607 - 40121651
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgta 419  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||    
T  40121607 tgttgaaatttggggcgtaactcatccttacaaaaccggcttgta 40121651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 19481381 - 19481429
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  19481381 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 19481429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 20735637 - 20735589
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  20735637 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 20735589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 29273055 - 29273103
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  29273055 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 29273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 29273214 - 29273262
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  29273214 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtaaggt 29273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 31305828 - 31305778
Alignment:
Q  373 cttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||||||||    
T  31305828 cttgttgaaatttggagcctaactcatccttacaaaaccggcttgtaaggt 31305778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 48558308 - 48558358
Alignment:
Q  373 cttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  48558308 cttgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggt 48558358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 15392220 - 15392171
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | |||||||||| |||||||||||||    
T  15392220 ttgttgaaatttggggcctaactcatccttacaaaatcggcttgtaaggt 15392171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 33879766 - 33879815
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  33879766 ttgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggt 33879815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 33964489 - 33964440
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  33964489 ttgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggt 33964440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 35926236 - 35926285
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | |||||||||||| |||||||||||    
T  35926236 ttgttgaaatttggggcctaactcatccttacaaaaccagcttgtaaggt 35926285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 2104250 - 2104297
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  2104250 tgttgaaatttggg-cctaactcatccttacaaaaccggcttgtaaggt 2104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 2997045 - 2997093
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||||||||| ||||    
T  2997045 tgttgaaatttggggcctaactcatccttacaaaaccggcttgtgaggt 2997093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 4022114 - 4022162
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||| ||||||||||||    
T  4022114 tgttgaaatttggggcctaactcatccttacaaaactggcttgtaaggt 4022162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 419
Target Start/End: Complemental strand, 9381015 - 9380971
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgta 419  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||    
T  9381015 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 9380971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 9381214 - 9381166
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||| ||||||||||||||    
T  9381214 tgttgaaatttggggcctaactcatccttacaaagccggcttgtaaggt 9381166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 376 - 420
Target Start/End: Complemental strand, 15392139 - 15392095
Alignment:
Q  376 gttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||    
T  15392139 gttgaaatttggggcctaactcatccttacaaaaccggcttgtaa 15392095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 17419902 - 17419854
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  17419902 tgttgaaatttggggtctaactcatccttacaaaaccggcttgtaaggt 17419854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 29272896 - 29272944
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | ||||||||||||||||||||||||    
T  29272896 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgtaaggt 29272944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 39649073 - 39649121
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  39649073 tgttgaaatttggggcataactcatccttacaaaaccggcttgtaaggt 39649121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 52846838 - 52846886
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  52846838 tgttgaaatttggggcttaactcatccttacaaaaccggcttgtaaggt 52846886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 463071 - 463120
Alignment:
Q  375 tgttgaaattt-gggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  463071 tgttgaaattttggggcctaactcatccttacaaaaccggcttgtaaggt 463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 13959518 - 13959469
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| | ||||| |||||| |||||||||||    
T  13959518 ttgttgaaatttggggcctaactcatccttaaaaaaccagcttgtaaggt 13959469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 15013641 - 15013592
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| ||||||| |   ||||||||||||||||||||||    
T  15013641 ttgttgaaatttggggcctaactcatttttacaaaaccggcttgtaaggt 15013592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 390 - 423
Target Start/End: Original strand, 19609189 - 19609222
Alignment:
Q  390 cctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||| ||||||||||||||||||||||||||    
T  19609189 cctaactcaaccttacaaaaccggcttgtaaggt 19609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 26366821 - 26366869
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  26366821 ttgttgaaatttggg-cgtaactcatccttacaaaaccggcttgtaaggt 26366869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 35024448 - 35024497
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| |||||||||| ||||||  | ||||||||||||||||||||||||    
T  35024448 ttgtagaaatttggggcctaacccatccttacaaaaccggcttgtaaggt 35024497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 43361540 - 43361589
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| |||  |||||| | ||||||||||||||||||||||||    
T  43361540 ttgttgaaattgggggtctaactcatccttacaaaaccggcttgtaaggt 43361589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 45264778 - 45264729
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||||   ||||| | ||||||||||||||||||||||||    
T  45264778 ttgttgaaatttggggattaactcatccttacaaaaccggcttgtaaggt 45264729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 2697320 - 2697368
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  ||||||   ||||||||||||||||||||||||    
T  2697320 tgttgaaatttggggtctaactcgtccttacaaaaccggcttgtaaggt 2697368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 8520082 - 8520130
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||||||  |||||| | | ||||||||||||||||||||||    
T  8520082 tgttgaaatttggggtctaactcatctttacaaaaccggcttgtaaggt 8520130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 383 - 423
Target Start/End: Original strand, 11149420 - 11149460
Alignment:
Q  383 tttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||| ||||||| | ||||||||||||||||||||||||    
T  11149420 tttggggcctaactcatccttacaaaaccggcttgtaaggt 11149460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 15391934 - 15391886
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||| ||| | ||||||||||| ||||||||||||    
T  15391934 tgttgaaatttggggccttactcatccttacaaaactggcttgtaaggt 15391886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 19937032 - 19937080
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||  ||||||| | ||||||||||||||||||||||||    
T  19937032 tgttgaaattcggtgcctaactcatccttacaaaaccggcttgtaaggt 19937080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 20735870 - 20735822
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | | ||||| | ||||||||||||||||||||||||    
T  20735870 tgttgaaatttgaggcttaactcatccttacaaaaccggcttgtaaggt 20735822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 21638255 - 21638303
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| ||||||| | ||||||||||||  ||||||||||    
T  21638255 tgttgaaatttggggcctaactcatccttacaaaaccatcttgtaaggt 21638303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 418
Target Start/End: Original strand, 22892680 - 22892720
Alignment:
Q  378 tgaaatttgggacctaacttaaccttacaaaaccggcttgt 418  Q
    ||||||||||| ||||||| | |||||||||||||||||||    
T  22892680 tgaaatttggggcctaactcatccttacaaaaccggcttgt 22892720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 37600987 - 37600939
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||||| | ||||| | ||||||||||||||||| ||||||    
T  37600987 tgttgaaatttggggcttaactcatccttacaaaaccggcttataaggt 37600939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 43423394 - 43423346
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||| ||||||||| ||||||| | ||||||||||| ||||||||||||    
T  43423394 tgttaaaatttggggcctaactcatccttacaaaactggcttgtaaggt 43423346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 45403555 - 45403507
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| | ||||||| | |||||||||||| |||||||||||    
T  45403555 tgttgaaatttgaggcctaactcatccttacaaaaccagcttgtaaggt 45403507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 13620 - 13669
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||||||||| |||  |||||| ||||||||||||||||||||||||||    
T  13620 ttgttgaaattgggggtctaactcaaccttacaaaaccggcttgtaaggt 13669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 20655 - 20607
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| |||||||| ||||||| | |||||||||||| |||||||||||    
T  20655 tgttgtaatttggggcctaactcatccttacaaaaccagcttgtaaggt 20607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 420
Target Start/End: Original strand, 2935 - 2981
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaa 420  Q
    ||||||||||||||| ||||||| | |||||||||||| ||||||||    
T  2935 ttgttgaaatttggggcctaactcatccttacaaaaccagcttgtaa 2981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 13414 - 13377
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaacc 411  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  13414 ttgttgaaatttgggacctaactcatccttacaaaacc 13377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 11055 - 11018
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaacc 411  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  11055 ttgttgaaatttgggacctaactcatccttacaaaacc 11018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 14721 - 14684
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaacc 411  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  14721 ttgttgaaatttgggacctaactcatccttacaaaacc 14684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 374 - 423
Target Start/End: Complemental strand, 76968 - 76919
Alignment:
Q  374 ttgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||| |||||||| ||||||| | | ||||||||||||||||||||||    
T  76968 ttgttgtaatttggggcctaactcatctttacaaaaccggcttgtaaggt 76919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 2591 - 2543
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||||| |  |||||| ||||||||||||||||||||| ||||    
T  2591 tgttgaaatttgaggtctaactcaaccttacaaaaccggcttgtgaggt 2543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 13421 - 13373
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    |||||||||| ||| ||||||| | ||| ||||||||||||||||||||    
T  13421 tgttgaaattcggggcctaactcatcctcacaaaaccggcttgtaaggt 13373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 4228 - 4276
Alignment:
Q  375 tgttgaaatttgggacctaacttaaccttacaaaaccggcttgtaaggt 423  Q
    ||||| ||||||||  |||||| | ||||||||||||||||||||||||    
T  4228 tgttgtaatttggggtctaactcatccttacaaaaccggcttgtaaggt 4276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University