View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3123_high_19 (Length: 288)
Name: NF3123_high_19
Description: NF3123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3123_high_19 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 240; Significance: 1e-133; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 1499754 - 1499495
Alignment:
| Q |
19 |
gaatattatatgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaagg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1499754 |
gaatattatatgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgcagtccaaactaactcaaataaagg |
1499655 |
T |
|
| Q |
119 |
tttctcaatttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcacta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
1499654 |
tttctcaatttcaggtactaggtcagagccaacaatgactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtaggtgagtattacta |
1499555 |
T |
|
| Q |
219 |
ggtccacaaaatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1499554 |
ggtccacaaaatgagattgcagtgatttcagaacaaacaaccaacacacgagcacctttg |
1499495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 277
Target Start/End: Complemental strand, 1478504 - 1478255
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| ||||| ||||| || | |||||||||||||| ||||||||| | |||||||| |||||||||||| |
|
|
| T |
1478504 |
atgttagaccagcttcacgaaggtgaccatcaatggctccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
1478405 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||| | ||||||| |||||||| | ||| ||||| ||||||||||||| ||||||||||||||| ||| | |||||||||||||| |||| |
|
|
| T |
1478404 |
ttctggtattgggtcagaaccaacaatgagtgcagcagcaccatctccaaatagtgcttgtccaacaagactgtccaaatgagtatcactaggaccacgg |
1478305 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcaccttt |
277 |
Q |
| |
|
|||| | |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1478304 |
aatgtcactgcagtaacttcagaacaaacaaccaacacacgagcaccttt |
1478255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 1492673 - 1492423
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
|||||| |||| |||||||||| |||||| ||| || ||||||||||||| |||||||||||||| ||||||| | |||||||| |||||| ||||| |
|
|
| T |
1492673 |
atgttaacccagcttcacgaagatgaccatcaatggcaccttcactatcaggagcaattgtttgtgctgtccaaatcatctcaaatataggtttttcaat |
1492574 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| ||||| | ||||| |||||||||| ||| || |||||||||||||||| ||||||||||||||| ||| | || |||||||| || |||| | |
|
|
| T |
1492573 |
ttctggtaccggatcagacccaacaataagtgcagctgctccatctccaaatagtgcttgtccaacaagactgtccaagtgtgtatcactgggaccacga |
1492474 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || |||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
1492473 |
aatgtgactgcagtgacttcagaacaaacaactaacacacgagcacctttg |
1492423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 28 - 272
Target Start/End: Complemental strand, 1509629 - 1509385
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||| || |||||||||| | |||||||||||||| ||||||||| | |||||||| || ||||||||| |
|
|
| T |
1509629 |
atgttagtccaacttcacgaaggtgaccgtcaatggcaccttcactatttggagcaattgtttgtgcagtccaaaccatctcaaatatagatttctcaat |
1509530 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| ||||| |||||| |||||||| | ||| ||||||||||||||||||| ||||||||||||||| ||| | |||||||||| ||| |||||| |
|
|
| T |
1509529 |
ttctggtacagggtcagtaccaacaatgagtgcagcagctccatctccaaataatgcttgtccaacaagactgtccaaatgagtatcaccagggccacaa |
1509430 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagca |
272 |
Q |
| |
|
|||| || |||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
1509429 |
aatgtgactgcaatgactttagaacaaacaaccaacacacgagca |
1509385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 277
Target Start/End: Complemental strand, 1482698 - 1482449
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| ||||| ||| || || ||||| || | |||||||||||||| ||||||||| | |||||||| |||||||||||| |
|
|
| T |
1482698 |
atgttagaccagcttcacgaagatgaccgtcaatggccccctcactgtctggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
1482599 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||| | ||||||| |||||||| | ||| ||||||||||||||||| | ||||||||||||||| ||| | |||||||||||||| |||| |
|
|
| T |
1482598 |
ttctggtattgggtcagaaccaacaatgagtgcagcagctccatctccaaagagtgcttgtccaacaagactgtccaaatgagtatcactaggaccacgg |
1482499 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcaccttt |
277 |
Q |
| |
|
|||| | |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1482498 |
aatgtcactgcagtaacttcagaacaaacaaccaacacacgagcaccttt |
1482449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 1505482 - 1505232
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| ||||| ||| |||||||| ||||||| || |||||||||| ||||||||| | ||||||| |||||||||||| |
|
|
| T |
1505482 |
atgttagtccagcttcacgaaggtgaccgtcaatggctccttcgctatcaggcgcgattgtttgtgcagtccaaaccatttcaaatataggtttctcaat |
1505383 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||| | | || || |||||||| | ||| ||||||||||||||||||| |||||||||||||| ||| | |||||||||||||| || | | |
|
|
| T |
1505382 |
ttctggtattggatctgaaccaacaattagtgcagcagctccatctccaaatagagcttgtccaacaaggctgtccaagtgagtatcactagggccgcga |
1505283 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || |||||||||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
1505282 |
aatgtgactgcagtgacttcggaacagacaaccaacacacgggcacctttg |
1505232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 1487180 - 1487007
Alignment:
| Q |
23 |
attatatgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttc |
122 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| || | ||| ||| |||||||||| ||| |||||||||| ||||||||| | |||||| | ||||||| |
|
|
| T |
1487180 |
attaaatgttagtccaacttcacgaagttggccgctaattgcttcttcactatctagagctattgtttgtgcagtccaaacaagctcaaagagaggtttc |
1487081 |
T |
|
| Q |
123 |
tcaatttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaag |
196 |
Q |
| |
|
||||||| | || | || ||||||||||| ||| | |||||||||| ||||||| ||||||||||||||| |
|
|
| T |
1487080 |
tcaatttttgatatcggatcggagccaacaatgactacaacagctccatcaccaaataatgcttgtccaacaag |
1487007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 32 - 278
Target Start/End: Original strand, 24163411 - 24163657
Alignment:
| Q |
32 |
tagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaatttca |
131 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||| | ||| |||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24163411 |
tagcccaaattcacgaagttggccacaaatagctccttcactatttggagcgattgtttgtgctgtccaaactaactcaaatagaggtttctcaatttcc |
24163510 |
T |
|
| Q |
132 |
ggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaaaatg |
231 |
Q |
| |
|
||| | |||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||| || |||||||| || ||||||||||||| |
|
|
| T |
24163511 |
tgtattgggtcagagccaacaatgactgcagcagctccatctccaaatagagcttgtccaacaaggttgtctaagtgagtatcgcttggtccacaaaatg |
24163610 |
T |
|
| Q |
232 |
agattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
24163611 |
tgattgcggtaacttcagaacaaacaaccaacacacgagaacctttg |
24163657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 5315616 - 5315366
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| |||||||||||||||| |||||||||||||| ||||||||| | |||||||| ||||||||| || |
|
|
| T |
5315616 |
atgttagtccagcttcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctctat |
5315517 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||||| |||||||||||||||||| || || |||||||||||||||| ||||||||||||||| ||| || |||||||||||||| |||| | |
|
|
| T |
5315516 |
ttctggtactgggtcagagccaacaataagagcagccgctccatctccaaatagtgcttgtccaacaaggctgtctaagtgagtatcactaggaccacga |
5315417 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315416 |
aatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttg |
5315366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 5284813 - 5284563
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| |||||||||||||||| |||||||||||||| ||||||||| | |||||||| |||| ||||||| |
|
|
| T |
5284813 |
atgttagtccagcttcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtctctcaat |
5284714 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||| | |||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||| || |||||||| ||||| |||| | |
|
|
| T |
5284713 |
ttctggtattgggtcagagccaacaataagagcagcagctccatctccaaatagtgcttgtccaacaagactgtctaagtgagtatcgctagggccacga |
5284614 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284613 |
aatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttg |
5284563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 5303001 - 5302751
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| |||||||||||||||| |||||||||||||| ||||||||| | |||||||| |||||||||||| |
|
|
| T |
5303001 |
atgttagtccagcttcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
5302902 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| ||||| |||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| ||| | |||||||||||||| |||| | |
|
|
| T |
5302901 |
ttctggtacggggtcagagccaacaataagagcagcagctccatctccaaatagtgcttgtccaacaagactgtccaagtgagtatcactagggccacga |
5302802 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || || ||||| || ||||| |||||||||||||||||||||||| |
|
|
| T |
5302801 |
aatgtgacagcggtgacctctgaacatacaaccaacacacgagcacctttg |
5302751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 5310902 - 5310652
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| |||||||||||||||| |||||||||||||| ||||||||| | |||||||| |||||||||||| |
|
|
| T |
5310902 |
atgttagtccagcttcacgaaggtgaccatcaatggctccttcactatcaggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
5310803 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||||| ||||||| |||||||||| || ||||||||||||||||| | |||||| |||||||| ||| | ||||||||||| || |||| | |
|
|
| T |
5310802 |
ttctggtactgggtcagaaccaacaataagagcagcagctccatctccaaacaatgcttgcccaacaaggctgtccaagtgagtatcactggggccacga |
5310703 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310702 |
aatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttg |
5310652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 278
Target Start/End: Original strand, 5289314 - 5289564
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| || ||| ||| |||||||||||||| | |||||||||||||| ||||||||| | |||||||| |||||||||||| |
|
|
| T |
5289314 |
atgttagtccagcttcacgaaggtggccatcaatggctccttcactatccggagcaattgtttgtgcagtccaaaccatctcaaatataggtttctcaat |
5289413 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||||| ||||||| |||||||||| || ||||||||||||||||| | |||||| |||||||| ||| | ||||||||||| || |||| |
|
|
| T |
5289414 |
ttctggtactgggtcagaaccaacaataagagcagcagctccatctccaaacagtgcttgcccaacaaggctgtccaagtgagtatcactggggccacgg |
5289513 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289514 |
aatgtgacagcggtgacttcagaacaaacaaccaacacacgagcacctttg |
5289564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 28 - 278
Target Start/End: Original strand, 46706605 - 46706855
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| |||||||||||||| | |||||||||||||| ||||||||| | |||||||| |||||||||||| |
|
|
| T |
46706605 |
atgttagtccagcttcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgaagtccaaaccatctcaaatataggtttctcaat |
46706704 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||||| | ||||| |||||||||| ||| ||||||| ||||||| | |||||| |||||||| ||| | |||||||||||||| || | |
|
|
| T |
46706705 |
ttctggtactggatcagaaccaacaataagtgcagcagctctgactccaaacagtgcttgcccaacaaggctgtccaagtgagtatcactagggccgcgg |
46706804 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
46706805 |
aatgtgactgcagtgacttcagaacaaacaaccaatacacgggcacctttg |
46706855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 44129079 - 44128829
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| |||||||||||||| | |||||||||||||| ||||||||| | |||||||| ||||||||||| |
|
|
| T |
44129079 |
atgttagtccagcttcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaat |
44128980 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||||| | || || |||||||| | ||| ||||||||||||||||||| || ||||||||||| ||| | |||||||||||||| || | | |
|
|
| T |
44128979 |
ttctggtactggatctgaaccaacaattagtgcagcagctccatctccaaatagggcctgtccaacaaggctgtccaagtgagtatcactagggccgcga |
44128880 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44128879 |
aatgtgactgcagtgacttcagaacagacaaccaacacacgagcacctttg |
44128829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 44133284 - 44133034
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| |||||| ||| |||||||||||||| | |||||||||||||| ||||||||| | |||||||| ||||||||||| |
|
|
| T |
44133284 |
atgttagtccagcttcacgaaggtgaccatcaatggctccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaat |
44133185 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||||| | || || |||||||| | ||| ||||||||||||||||||| || ||||||||||| ||| | |||||||||||||| || | | |
|
|
| T |
44133184 |
ttctggtactggatctgaaccaacaattagtgcagcagctccatctccaaatagggcctgtccaacaaggctgtccaagtgagtatcactagggccgcga |
44133085 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44133084 |
aatgtgactgcagtgacttcagaacagacaaccaacacacgagcacctttg |
44133034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 44141706 - 44141456
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||| |||||||||| ||||| ||| || ||||||||||| | |||||||||||||| ||||||||| | |||||||| ||||||||||| |
|
|
| T |
44141706 |
atgttagtccagcttcacgaaggtgaccgtcaatggccccttcactatctggagcaattgtttgtgcagtccaaaccatctcaaatattggtttctcaat |
44141607 |
T |
|
| Q |
128 |
ttcaggtactaggtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaa |
227 |
Q |
| |
|
||| |||||| | || || |||||||| | ||| ||||||||||||||||||| ||||||||||||||| ||| | |||||||||||||| || | | |
|
|
| T |
44141606 |
ttctggtactggatctgaaccaacaattagtgcagcagctccatctccaaatagtgcttgtccaacaaggctgtccaagtgagtatcactagggccgcga |
44141507 |
T |
|
| Q |
228 |
aatgagattgcagtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
44141506 |
aatgtgactgcagtgacttcagaacagacaaccaacacacgagcacctttg |
44141456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 278
Target Start/End: Original strand, 37863019 - 37863257
Alignment:
| Q |
40 |
cttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaatttcaggtactag |
139 |
Q |
| |
|
|||| ||||| |||||| |||||||||||||||||| | | | |||||||||| ||||||||| || ||||| ||||| ||||||| ||| || | | |
|
|
| T |
37863019 |
cttctcgaaggtgaccatcaatagctccttcactatctggaacgattgtttgtgcagtccaaaccaattcaaacaaaggcttctcaacttctggcaacgg |
37863118 |
T |
|
| Q |
140 |
gtcagagccaacaataactgccgcagctccatctccaaatattgcttgtccaacaagtttgtgtagttgagtatcactaggtccacaaaatgagattgca |
239 |
Q |
| |
|
|| || |||||||| || || || || ||||||||||| | ||| || || ||||| | | || ||||||||||||||||||| || | | |||| |
|
|
| T |
37863119 |
atctgaaccaacaatcacagctgctgcaccatctccaaacaatgcctgccccacaagactatcaagatgagtatcactaggtccacggaaagtaactgca |
37863218 |
T |
|
| Q |
240 |
gtgacttcagaacaaacaaccaacacacgagcacctttg |
278 |
Q |
| |
|
|||| || |||||||| ||||| |||||||| |||||| |
|
|
| T |
37863219 |
gtgatctccgaacaaaccaccaaaacacgagcgcctttg |
37863257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 35251323 - 35251216
Alignment:
| Q |
28 |
atgttagcccaacttcacgaagttgaccacaaatagctccttcactatcagaagcaattgtttgtgtagtccaaactaactcaaataaaggtttctcaat |
127 |
Q |
| |
|
||||||| ||||| |||||||| |||||| ||||||||||| |||||||| | |||||||||| |||||| ||| |||||| |||||| |||||| |
|
|
| T |
35251323 |
atgttagtccaacctcacgaaggtgaccatcaatagctccttgactatcaggaaggattgtttgtgcagtccactctagctcaaacaaaggtctctcaac |
35251224 |
T |
|
| Q |
128 |
ttcaggta |
135 |
Q |
| |
|
||||||| |
|
|
| T |
35251223 |
ctcaggta |
35251216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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