View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3123_high_9 (Length: 381)

Name: NF3123_high_9
Description: NF3123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3123_high_9
NF3123_high_9
[»] chr3 (29 HSPs)
chr3 (8-100)||(19659142-19659234)
chr3 (8-94)||(5348130-5348216)
chr3 (14-98)||(19631290-19631374)
chr3 (13-83)||(4657439-4657509)
chr3 (8-93)||(11832277-11832362)
chr3 (8-100)||(25660880-25660973)
chr3 (8-100)||(25667285-25667378)
chr3 (8-100)||(25673690-25673783)
chr3 (13-93)||(12252084-12252164)
chr3 (13-98)||(11829211-11829296)
chr3 (33-94)||(15044580-15044641)
chr3 (8-100)||(25680115-25680208)
chr3 (8-100)||(25688419-25688512)
chr3 (13-93)||(30104254-30104334)
chr3 (8-98)||(10935217-10935307)
chr3 (13-73)||(7770018-7770078)
chr3 (50-98)||(16218278-16218326)
chr3 (13-100)||(4161586-4161672)
chr3 (8-94)||(12695502-12695587)
chr3 (54-95)||(15540756-15540797)
chr3 (13-81)||(6224458-6224525)
chr3 (57-101)||(13440903-13440947)
chr3 (26-81)||(20421653-20421708)
chr3 (18-100)||(17394186-17394268)
chr3 (8-74)||(17580658-17580724)
chr3 (8-96)||(10726823-10726908)
chr3 (14-95)||(14860609-14860689)
chr3 (33-98)||(19431739-19431803)
chr3 (13-53)||(27053158-27053198)
[»] chr8 (14 HSPs)
chr8 (7-82)||(25281802-25281877)
chr8 (8-98)||(23539657-23539747)
chr8 (14-95)||(18829983-18830064)
chr8 (13-101)||(24625617-24625705)
chr8 (23-98)||(23543193-23543268)
chr8 (13-94)||(16090627-16090708)
chr8 (20-96)||(14392971-14393046)
chr8 (13-93)||(23241440-23241520)
chr8 (8-83)||(15887048-15887123)
chr8 (17-98)||(20496153-20496234)
chr8 (13-93)||(18829241-18829321)
chr8 (58-98)||(25264020-25264060)
chr8 (52-98)||(15929673-15929719)
chr8 (13-63)||(22314878-22314928)
[»] chr1 (9 HSPs)
chr1 (13-100)||(23475180-23475267)
chr1 (8-96)||(21720992-21721080)
chr1 (13-94)||(18621226-18621305)
chr1 (16-98)||(20408745-20408827)
chr1 (13-100)||(22615863-22615950)
chr1 (33-93)||(21424042-21424102)
chr1 (26-83)||(21981572-21981629)
chr1 (30-98)||(21403160-21403228)
chr1 (20-97)||(21682417-21682495)
[»] scaffold0228 (3 HSPs)
scaffold0228 (8-98)||(6316-6406)
scaffold0228 (8-98)||(13898-13988)
scaffold0228 (8-98)||(23850-23940)
[»] chr5 (15 HSPs)
chr5 (13-98)||(17170325-17170410)
chr5 (13-93)||(18223375-18223455)
chr5 (8-96)||(19315702-19315790)
chr5 (13-93)||(24516764-24516844)
chr5 (13-93)||(22826936-22827016)
chr5 (14-96)||(19858749-19858831)
chr5 (14-100)||(22446783-22446869)
chr5 (33-95)||(10176021-10176081)
chr5 (28-99)||(31480307-31480377)
chr5 (13-93)||(26260408-26260488)
chr5 (52-94)||(17364851-17364893)
chr5 (13-98)||(20726329-20726412)
chr5 (27-94)||(22053212-22053278)
chr5 (19-100)||(25243028-25243109)
chr5 (19-100)||(25307180-25307261)
[»] chr6 (25 HSPs)
chr6 (8-98)||(16896789-16896879)
chr6 (8-93)||(14355775-14355860)
chr6 (13-101)||(13310652-13310739)
chr6 (13-94)||(14565892-14565973)
chr6 (13-98)||(18027827-18027912)
chr6 (26-100)||(13562477-13562551)
chr6 (13-93)||(18558143-18558223)
chr6 (17-100)||(19969028-19969109)
chr6 (16-95)||(19976592-19976671)
chr6 (13-80)||(14894541-14894608)
chr6 (13-78)||(4176997-4177061)
chr6 (13-98)||(14672249-14672334)
chr6 (13-81)||(15514654-15514720)
chr6 (44-83)||(10975683-10975722)
chr6 (8-90)||(5484119-5484201)
chr6 (8-69)||(19980945-19981006)
chr6 (33-92)||(9296635-9296693)
chr6 (13-95)||(9521712-9521792)
chr6 (13-60)||(17013080-17013127)
chr6 (13-100)||(23301291-23301378)
chr6 (13-79)||(18733719-18733784)
chr6 (13-78)||(31466954-31467018)
chr6 (27-63)||(19176066-19176102)
chr6 (47-95)||(22460308-22460356)
chr6 (13-81)||(31159731-31159797)
[»] scaffold0111 (2 HSPs)
scaffold0111 (13-98)||(25292-25377)
scaffold0111 (52-100)||(29225-29273)
[»] scaffold0018 (1 HSPs)
scaffold0018 (13-94)||(61849-61930)
[»] scaffold0039 (1 HSPs)
scaffold0039 (8-100)||(8613-8705)
[»] chr7 (15 HSPs)
chr7 (8-100)||(11773285-11773377)
chr7 (8-98)||(13761022-13761112)
chr7 (8-97)||(3169557-3169646)
chr7 (13-101)||(18083266-18083354)
chr7 (7-97)||(29740550-29740639)
chr7 (14-98)||(16095580-16095664)
chr7 (13-101)||(17923282-17923370)
chr7 (13-98)||(18363089-18363174)
chr7 (50-98)||(16197719-16197767)
chr7 (13-101)||(19070663-19070750)
chr7 (13-98)||(5546-5630)
chr7 (13-65)||(4485521-4485573)
chr7 (54-98)||(8326472-8326516)
chr7 (52-97)||(13146672-13146717)
chr7 (44-100)||(17160102-17160157)
[»] scaffold0964 (1 HSPs)
scaffold0964 (8-101)||(2915-3008)
[»] scaffold0050 (1 HSPs)
scaffold0050 (13-96)||(77993-78076)
[»] chr2 (25 HSPs)
chr2 (7-94)||(20511061-20511148)
chr2 (8-98)||(18995989-18996079)
chr2 (8-98)||(24282364-24282453)
chr2 (13-98)||(28774988-28775072)
chr2 (13-83)||(19285328-19285397)
chr2 (13-66)||(19901698-19901751)
chr2 (13-94)||(24699272-24699353)
chr2 (13-100)||(21654960-21655047)
chr2 (13-100)||(24689915-24690002)
chr2 (8-71)||(27354277-27354340)
chr2 (8-101)||(34133550-34133642)
chr2 (14-100)||(21909410-21909496)
chr2 (13-81)||(45572808-45572875)
chr2 (13-81)||(45576475-45576542)
chr2 (13-81)||(45580142-45580209)
chr2 (13-81)||(45583809-45583876)
chr2 (13-81)||(45587476-45587543)
chr2 (13-81)||(45591143-45591210)
chr2 (13-81)||(45594810-45594877)
chr2 (13-81)||(45598477-45598544)
chr2 (13-81)||(45602144-45602211)
chr2 (13-81)||(45605811-45605878)
chr2 (13-81)||(45609478-45609545)
chr2 (13-81)||(45613145-45613212)
chr2 (13-81)||(45616812-45616879)
[»] chr4 (14 HSPs)
chr4 (8-98)||(16571910-16572000)
chr4 (13-96)||(21982710-21982793)
chr4 (8-93)||(28801546-28801630)
chr4 (14-95)||(9273385-9273466)
chr4 (13-98)||(15712171-15712258)
chr4 (13-94)||(9652748-9652827)
chr4 (52-94)||(11777004-11777046)
chr4 (14-95)||(9253414-9253495)
chr4 (44-101)||(16684900-16684957)
chr4 (7-76)||(6942864-6942935)
chr4 (13-73)||(12333994-12334054)
chr4 (26-93)||(9567330-9567397)
chr4 (13-95)||(19890336-19890418)
chr4 (35-100)||(23269250-23269315)
[»] scaffold0014 (1 HSPs)
scaffold0014 (13-96)||(202204-202286)
[»] scaffold0007 (1 HSPs)
scaffold0007 (33-100)||(204092-204159)
[»] scaffold0196 (1 HSPs)
scaffold0196 (13-97)||(17701-17784)
[»] scaffold0193 (1 HSPs)
scaffold0193 (14-93)||(19658-19737)
[»] scaffold0186 (1 HSPs)
scaffold0186 (13-92)||(19818-19897)
[»] scaffold0004 (1 HSPs)
scaffold0004 (13-100)||(370687-370774)
[»] scaffold0112 (1 HSPs)
scaffold0112 (13-81)||(13963-14031)
[»] scaffold0772 (1 HSPs)
scaffold0772 (12-94)||(2111-2192)
[»] scaffold0040 (1 HSPs)
scaffold0040 (44-100)||(42367-42423)
[»] scaffold0058 (1 HSPs)
scaffold0058 (7-97)||(73540-73628)
[»] scaffold0205 (1 HSPs)
scaffold0205 (31-93)||(8755-8817)
[»] scaffold0305 (1 HSPs)
scaffold0305 (13-62)||(10299-10348)
[»] scaffold0183 (2 HSPs)
scaffold0183 (13-78)||(11822-11886)
scaffold0183 (8-63)||(20109-20164)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-101)||(6439-6527)
[»] scaffold0331 (1 HSPs)
scaffold0331 (13-65)||(5200-5252)
[»] scaffold0001 (2 HSPs)
scaffold0001 (50-98)||(151223-151271)
scaffold0001 (52-94)||(155616-155658)
[»] scaffold0133 (1 HSPs)
scaffold0133 (13-60)||(26105-26152)
[»] scaffold0020 (1 HSPs)
scaffold0020 (50-92)||(109106-109148)
[»] scaffold0233 (1 HSPs)
scaffold0233 (13-94)||(16412-16493)
[»] scaffold0084 (1 HSPs)
scaffold0084 (13-61)||(3491-3539)


Alignment Details
Target: chr3 (Bit Score: 69; Significance: 7e-31; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 19659234 - 19659142
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||| |||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19659234 cgaataaaatacacacatagacaattaatcacacaaaagcacatataaacacacataataaataattaaaataattctagcgaaaaacgggct 19659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 5348130 - 5348216
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||| |||||||||||| ||||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  5348130 cgaataaaatacacacatagacaattaatcatatacaagtacatataaacacacataataaataattaaaataattctagcgaaaaa 5348216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 19631374 - 19631290
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    ||||||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| |||| |||| |||||||||    
T  19631374 aaatacacacagagacaattaatcacacacaagcacatataaacacacataataaataaataaaacaattctagcaaaaaacggg 19631290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 4657439 - 4657509
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 83  Q
    ||||||||||   ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  4657439 aaaatacacatggagacaattaatcacatacaagcacatataaacacacataataaataattaaaataatt 4657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 11832362 - 11832277
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||| |||||||||| | |||||| |||||||||| ||||| ||||||||| |||||| || |||||||||||||| |||||||||    
T  11832362 cgaataaaatacacatagagacaaataatcacatacaagcacatataaacatacataaaaattaattaaaataattctagcgaaaa 11832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25660973 - 25660880
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaat-aattaaaataattatagcgaaaaacgggct 100  Q
    |||| |||||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| | ||| ||||||||| ||||||||||||||||    
T  25660973 cgaataaaatacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25660880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25667378 - 25667285
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaat-aattaaaataattatagcgaaaaacgggct 100  Q
    |||| |||||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| | ||| ||||||||| ||||||||||||||||    
T  25667378 cgaataaaatacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25667285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25673783 - 25673690
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaat-aattaaaataattatagcgaaaaacgggct 100  Q
    |||| |||||||||||| || ||||||| |||||| ||||| ||||||||| ||||||||| | ||| ||||||||| ||||||||||||||||    
T  25673783 cgaataaaatacacacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25673690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 12252164 - 12252084
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||| | |||||| ||||| |||| ||||| |||| |||||||||||||| |||||||||||||| |||||||||    
T  12252164 aaaatacacatagagacaaataatcgcatacaagcacatatgaacacacataataattaattaaaataattctagcgaaaa 12252084  T

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Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 11829211 - 11829296
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| ||| || |||||||||| ||| ||||||||||||||||||||| |||| ||| ||| | ||||||||| ||||    
T  11829211 aaaatacacacagagataaataatcacatacaagaatatataaacacacataataattaataaaagtaaatctagcgaaaatcggg 11829296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 15044641 - 15044580
Alignment:
Q  33 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    ||||||||||  |||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  15044641 taatcacatacgagcacatataaacacatataataaataattaaaataattatagcaaaaaa 15044580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25680208 - 25680115
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct 100  Q
    |||| |||||||| ||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||    
T  25680208 cgaataaaatacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25680115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25688512 - 25688419
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggct 100  Q
    |||| |||||||| ||| || ||||||| |||||| ||||| ||||||||| ||||||||| ||| ||||| ||||| ||||||||||||||||    
T  25688512 cgaataaaatacatacagaggcaattaagcacatacaagcacatataaacatacataataattaaataaaaataattctagcgaaaaacgggct 25688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 30104334 - 30104254
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||||||| |||  |||||||||| || || ||||||||||||||||| | |||||||||||||| |||| ||||    
T  30104334 aaaatacacacaaaaacagataatcacatacaaacacatataaacacacataatcattaattaaaataattctagcaaaaa 30104254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 10935217 - 10935307
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| ||||||||||||||| ||| |||||||| | || || |||| ||||||| |||||| |||||||||||| | |||| |||||||||    
T  10935217 cgaataaaatacacacaaaggcaaataatcacacataaacacatattaacacacttaataattaattaaaataaatctagcaaaaaacggg 10935307  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 7770078 - 7770018
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataat 73  Q
    ||||||||| || ||||||| ||||||||| ||||| ||| ||||||||||||||||||||    
T  7770078 aaaatacacgcagagacaataaatcacatacaagcacatacaaacacacataataaataat 7770018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 16218326 - 16218278
Alignment:
Q  50 atataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||    
T  16218326 atatcaacacacataataaataattaaaatatttctagcgaaaaacggg 16218278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 4161672 - 4161586
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||| ||||| || |||||||||||||| ||||||||| ||||||| || | ||| ||||||||||| | ||||||||| ||||||    
T  4161672 aaaatatacacagaggcaattaatcacataaaagcatataaaaacacatatta-aaacaattaaaataaatctagcgaaaatcgggct 4161586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 12695587 - 12695502
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||| ||||| |||||| ||||||| ||||||||  ||||| |||| |||||| |||| | ||||||||||||||| ||||||||||    
T  12695587 cgaataaaattcacacagagacaat-aatcacatgcaagcacatatcaacacatataagagataattaaaataattctagcgaaaaa 12695502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 15540756 - 15540797
Alignment:
Q  54 aaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  15540756 aaacacacataataaataattaaaataattttagtgaaaaac 15540797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 6224525 - 6224458
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||||| || |||||||||||||| ||||||||| ||||||| || | ||| |||||||||||    
T  6224525 aaaatacacacagaggcaattaatcacataaaagcatataaaaacacatatta-aaacaattaaaataa 6224458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 101
Target Start/End: Original strand, 13440903 - 13440947
Alignment:
Q  57 cacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||    
T  13440903 cacatataataaataattaaaatgattctagcgaaaaacgggcta 13440947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 20421653 - 20421708
Alignment:
Q  26 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||||||| || ||||| ||||||||||| |||| || ||||||||||||    
T  20421653 agacaattaatcacgtacaagcacatataaacacatataaaaattaattaaaataa 20421708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 17394186 - 17394268
Alignment:
Q  18 acacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    ||||||| || ||| |||||||| | ||||||||||||||||  |||||||| ||| ||||||| | || |||||| ||||||    
T  17394186 acacacataggcaaataatcacacacaagcatatataaacacttataataaaaaataaaaataaatttaacgaaaatcgggct 17394268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 17580724 - 17580658
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataatt 74  Q
    |||| |||||||||| | |||||| |||||||| | || |  |||||||||||||||||||||||||    
T  17580724 cgaataaaatacacaaatagacaaataatcacacacaaacgcatataaacacacataataaataatt 17580658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 10726823 - 10726908
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    |||| |||||||| |||||| ||| |||||| ||| ||||  ||||||  ||||||||||||||| ||||||| || ||||||||||||    
T  10726823 cgaataaaatacatacaaagtcaagtaatcatatacaagcgcatataa--acacataataaataa-taaaatagttctagcgaaaaacg 10726908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 14860689 - 14860609
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    ||||||| ||||| ||||| ||||||| | || ||||||||   ||| |||||||||||||||||||||| | |||||||||    
T  14860689 aaatacaaacaaa-acaataaatcacacataaacatatatagttacatataataaataattaaaataattctggcgaaaaac 14860609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 19431739 - 19431803
Alignment:
Q  33 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||| ||||| ||||||||||| | || || |||||||||||| | ||||||||||||||    
T  19431739 taatcacatacaagcacatataaacacataaaa-aattaattaaaataaatctagcgaaaaacggg 19431803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 27053158 - 27053198
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatat 53  Q
    |||||||||||| | ||||||||||||||| ||||||||||    
T  27053158 aaaatacacacatatacaattaatcacatacaagcatatat 27053198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 7e-28; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 25281802 - 25281877
Alignment:
Q  7 tcgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataat 82  Q
    ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  25281802 tcgaataaaatacacacaaagacaattaatcacatacaagcacatataaacacacataataaataattaaaataat 25281877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 23539747 - 23539657
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||||||| ||| || |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23539747 cgaataaaatacacacatagataaataatcacatacaagcgcatataaacacacataataaataattaaaataattatagcgaaaaacggg 23539657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 18830064 - 18829983
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    ||||||||||| ||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  18830064 aaatacacacagagacaattaattacatacaagcacatataaatacacataataaataattaaaataattatagcgaaaaac 18829983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 24625617 - 24625705
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    |||||||||||| |||||| |||||||||| ||||| ||||||||||| ||||||||||| |||||||||| ||||||||| |||||||    
T  24625617 aaaatacacacagagacaaataatcacatacaagcacatataaacacatataataaataaataaaataattctagcgaaaatcgggcta 24625705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 23543193 - 23543268
Alignment:
Q  23 caaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  23543193 caaagacaattaatcatatataagcacatataaacacacataataaataattaaaataattctagcaaaaaacggg 23543268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 16090708 - 16090627
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    ||||||||||||||||||||||||||||   ||||  ||||| |||||||||||||||||||||||||||| ||||||||||    
T  16090708 aaaatacacacaaagacaattaatcacacgcaagcgcatatagacacacataataaataattaaaataattctagcgaaaaa 16090627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 14393046 - 14392971
Alignment:
Q  20 acacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    ||||| ||||||||||||||||  ||||||| ||||||||| |||||||||||||||||||| | ||||||||||||    
T  14393046 acacacagacaattaatcacatgcaagcata-ataaacacatataataaataattaaaataaatctagcgaaaaacg 14392971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 23241520 - 23241440
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||| ||||||||||||||||||| | ||||| || |||| ||||||||||||||| |||||||||| |||| ||||    
T  23241520 aaaatacaaacaaagacaattaatcacacacaagcacatgtaaatacacataataaataaataaaataattttagccaaaa 23241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 15887048 - 15887123
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 83  Q
    |||| |||||| ||||| ||||||||||||||||| |||   |||||||||| |||||||||||||||||||||||    
T  15887048 cgaataaaatatacacagagacaattaatcacatacaagtgcatataaacacgcataataaataattaaaataatt 15887123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 20496234 - 20496153
Alignment:
Q  17 tacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| ||| ||||||||||||| | | ||||| | ||||||||||||||||| |||||||||||||| ||||||||| ||||    
T  20496234 tacatacagagacaattaatcatacacaagcacaaataaacacacataataattaattaaaataattctagcgaaaatcggg 20496153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 18829241 - 18829321
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||| ||| ||||| || ||| |||||||||||| |||||||| |||| | |||||||||||||||||| ||| |||||    
T  18829241 aaaatatacaaaaagataaataaccacatagaagcacatataaacgcacacactaaataattaaaataattctagagaaaa 18829321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 25264020 - 25264060
Alignment:
Q  58 acacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  25264020 acacataataaataattaaaataattctatcgaaaaacggg 25264060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 15929673 - 15929719
Alignment:
Q  52 ataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    ||||||| | ||||||||||| |||||||||| ||||||||||||||    
T  15929673 ataaacaaatataataaataaataaaataattttagcgaaaaacggg 15929719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 22314878 - 22314928
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacat 63  Q
    |||||||||||| || ||||||||||||||  |||||| ||||||||||||    
T  22314878 aaaatacacacataggcaattaatcacatacgagcataaataaacacacat 22314928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 23475267 - 23475180
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||||| |||||    
T  23475267 aaaatacacacagagacaattaatcacatacaagcacatataatcacacataataaataattaaaataattctagcgaaaaatgggct 23475180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 21720992 - 21721080
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    |||| |||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||||| | ||| ||||||||||||    
T  21720992 cgaataaaatacacacagagacaattaatcacatacgagcacatataaacacacataataaataattaaagtgattctagcgaaaaacg 21721080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 18621305 - 18621226
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||| ||||||||||    
T  18621305 aaaatacacacagagacaattaatcacatacaagcacatataaacacacataataaataat--aaaaaattctagcgaaaaa 18621226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 20408745 - 20408827
Alignment:
Q  16 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    ||||||||| |||||| |||||||| | ||  | ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20408745 atacacacatagacaaataatcacacacaaaaacatataaacacacataataagtaattaaaataattatagcgaaaaacggg 20408827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 22615863 - 22615950
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||||||  ||||| || |||||||||| ||||  ||||||||||||||||||||||||||||| |  ||||||||||||||||||    
T  22615863 aaaatacacttaaagataaataatcacatacaagcgcatataaacacacataataaataattaaaacatctatagcgaaaaacgggct 22615950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 21424042 - 21424102
Alignment:
Q  33 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  21424042 taatcacatacaagcacatataaacacacataataattaattaaaataattctagcgaaaa 21424102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 21981572 - 21981629
Alignment:
Q  26 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 83  Q
    |||||| |||||||||| ||||| |||| |||||||||||||| ||||||||||||||    
T  21981572 agacaaataatcacatacaagcacatatgaacacacataataattaattaaaataatt 21981629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 21403160 - 21403228
Alignment:
Q  30 aattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    ||||||||||||| ||| |   |||||||||||||||||||||||||||||||| |||  |||||||||    
T  21403160 aattaatcacatacaagaaccaataaacacacataataaataattaaaataattctagtaaaaaacggg 21403228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 21682417 - 21682495
Alignment:
Q  20 acacaaagacaattaatcacatagaagcatatataaacacacataataaataatt-aaaataattatagcgaaaaacgg 97  Q
    ||||||||||||||||||||  | || || |||||||| |||||||  ||||||| ||||||||| |||||||||||||    
T  21682417 acacaaagacaattaatcacgcataaacacatataaacgcacataagcaataattcaaaataattctagcgaaaaacgg 21682495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 6406 - 6316
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  6406 cgaataaaatacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg 6316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 13988 - 13898
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  13988 cgaataaaatacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg 13898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 23940 - 23850
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  23940 cgaataaaatacacacagagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcggg 23850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 17170325 - 17170410
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  17170325 aaaatacacacagagacaattaatcacatacaagcgcatataaacacacataataaataattaaaataattgtagagaaaaacggg 17170410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 18223455 - 18223375
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||| ||||||| | |||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  18223455 aaaatatacacaaatataattaatcgcatacaagcacatataaacacacataataaataattaaaataattctagcgaaaa 18223375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 96
Target Start/End: Complemental strand, 19315790 - 19315702
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    |||| |||||| ||||| |||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||||||||  ||||||||    
T  19315790 cgaataaaatagacacagagacaaataatcacatacaagcacatataaacacacataatgaataattaaaataattatattgaaaaacg 19315702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 24516764 - 24516844
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||| |||| ||||    
T  24516764 aaaatacacacagagacaattaatcacatacaagcacatataaacgcacataataattaattaaaataattttagcaaaaa 24516844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 22827016 - 22826936
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||||| |||| | |||||||||| ||| | ||||| ||||||||||||| |||||||||||||| |||| ||||    
T  22827016 aaaatacacacagagacgaataatcacatacaagaacatatagacacacataataattaattaaaataattctagcaaaaa 22826936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 19858831 - 19858749
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    ||||||||||| |||||| |||||||| | |||   |||||| ||||||||||||||||||| ||||||| || |||||||||    
T  19858831 aaatacacacagagacaaataatcacacacaagagcatataaccacacataataaataattagaataattctaacgaaaaacg 19858749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 22446783 - 22446869
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||| |||| ||||||  ||||||||| |  || ||||||||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  22446783 aaatacgcacatagacaaacaatcacatacacacacatataaacacacataataattaaataaaataattctagcgaaaatcgggct 22446869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 10176081 - 10176021
Alignment:
Q  33 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    |||||||||| || || |||||||||||  ||||||||||||||||||||| |||||||||||    
T  10176081 taatcacatacaaacacatataaacaca--taataaataattaaaataattctagcgaaaaac 10176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 31480307 - 31480377
Alignment:
Q  28 acaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggc 99  Q
    |||| |||||| ||| ||||| |||||||||||||||||  ||||||||||||||| ||||||||| |||||    
T  31480307 acaaataatcatatacaagcacatataaacacacataat-gataattaaaataattctagcgaaaatcgggc 31480377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 26260488 - 26260408
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||||| ||  || |||||||| | ||||||||| | ||||||||||||| |||| ||||||| | |||||||||    
T  26260488 aaaatacacacagaggtaaataatcacacacaagcatataaatacacacataataattaataaaaataaatctagcgaaaa 26260408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 17364851 - 17364893
Alignment:
Q  52 ataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    ||||||||| |||||||||||||||||||||| |||| |||||    
T  17364851 ataaacacatataataaataattaaaataattctagctaaaaa 17364893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 20726412 - 20726329
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||| ||||||||| || |||||||||| ||||| |||  |||| |||||| | ||||||||||||||| ||  ||||||||||    
T  20726412 aaaataaacacaaagagaaataatcacatacaagcacata--aacatacataaaatataattaaaataattctattgaaaaacggg 20726329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 22053278 - 22053212
Alignment:
Q  27 gacaattaatcacatagaagcatatataaacacacataataaa-taattaaaataattatagcgaaaaa 94  Q
    ||||||||||||||||| |||| ||||||  |||| |||||||  ||||||||||| ||||||||||||    
T  22053278 gacaattaatcacataggagcacatataa--acacgtaataaagcaattaaaataaatatagcgaaaaa 22053212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 25243109 - 25243028
Alignment:
Q  19 cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||||||| || ||| |||||  || || | ||||||||| |||||||||| ||||||||||| |||| |||||| ||||    
T  25243109 cacacaaagaaaaataagcacatgtaaacacacataaacacatataataaatagttaaaataattctagctaaaaacaggct 25243028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 25307261 - 25307180
Alignment:
Q  19 cacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||||||| || ||| |||||  || || | ||||||||| |||||||||| ||||||||||| |||| |||||| ||||    
T  25307261 cacacaaagaaaaataagcacatgtaaacacacataaacacatataataaatagttaaaataattctagctaaaaacaggct 25307180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 7e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 16896789 - 16896879
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| || | |||||||||    
T  16896789 cgaataaaatacacacagagacaattcatcacatacaagcacatataaacacacataataaataattaaaataattctaacaaaaaacggg 16896879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 14355775 - 14355860
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||| |||||||||||| || |||| ||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  14355775 cgaataaaatacacacagaggcaatcaatcacacacaagcacatataaacacacataataaataattaaaataattttagcgaaaa 14355860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 13310652 - 13310739
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    |||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||||| |||||||| | ||||||||| |||||||    
T  13310652 aaaatacacacaaagacaattaattacatagaagcacacataaatacacataataaataa-taaaataaatctagcgaaaatcgggcta 13310739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 14565973 - 14565892
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||||||||||||||||||||||||||| | ||  | |||||||||||||||||||||||||||||||| | || |||||||    
T  14565973 aaaatacacacaaagacaattaatcacacataaaaacatataaacacacataataaataattaaaataaatctaacgaaaaa 14565892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 18027912 - 18027827
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| ||| || |||||||| | ||||| |||||||||||||||||||||||||||||||||| || | |||||||||    
T  18027912 aaaatacacacagagataaataatcacacacaagcacatataaacacacataataaataattaaaataattctatcaaaaaacggg 18027827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 13562551 - 13562477
Alignment:
Q  26 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    ||||||||||||||| | ||||  ||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  13562551 agacaattaatcacacacaagcgaatataaacacatataataaatatttaaaataattttagcgaaaaacgggct 13562477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 93
Target Start/End: Original strand, 18558143 - 18558223
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||||| |||||| ||| |||||| ||||| ||||||||| ||||||||| |||||||||||||| || ||||||    
T  18558143 aaaatacacacatagacaaataaacacatacaagcacatataaacatacataataattaattaaaataattctaacgaaaa 18558223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 19969109 - 19969028
Alignment:
Q  17 tacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||| |||||| ||||||||||| || ||||| ||| ||||||||||  |||||||||||||||||||||||||||||| ||||    
T  19969109 tacatacaaaggcaattaatcacttacaagcacataaaaacacacat--taaataattaaaataattatagcgaaaaacaggct 19969028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 19976671 - 19976592
Alignment:
Q  16 atacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    |||||||||||| ||| |||||||| | ||||| ||||||||||| ||||||||||| |||||||||| ||| |||||||    
T  19976671 atacacacaaaggcaaataatcacacaaaagcacatataaacacatataataaataactaaaataattctagagaaaaac 19976592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 14894541 - 14894608
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaata 80  Q
    ||||||||||   |||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||    
T  14894541 aaaatacacattgagacaaataatcatatacaagcacatataaacacacataataaataattaaaata 14894608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 4177061 - 4176997
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa 78  Q
    ||||| ||||||||||||| ||||||||||  ||||||||||||||||||||| ||| ||||||||    
T  4177061 aaaatgcacacaaagacaaataatcacatatgagcatatataaacacacataa-aaacaattaaaa 4176997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 14672249 - 14672334
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| || |||||||||||||| ||||| ||||||| ||| |||| || |||||||||||| | || |||||| ||||    
T  14672249 aaaatacacacagaggcaattaatcacatacaagcacatataaatacatataaaaattaattaaaataaatctaacgaaaatcggg 14672334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 15514720 - 15514654
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||||| || |||||||||||||| |||||||||||||  ||||||| || ||||||||||||    
T  15514720 aaaatacacacagaggcaattaatcacatacaagcatatataaa--cacataaaaattaattaaaataa 15514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 83
Target Start/End: Original strand, 10975683 - 10975722
Alignment:
Q  44 aagcatatataaacacacataataaataattaaaataatt 83  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  10975683 aagcatatataaacacacataataattaattaaaataatt 10975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 5484201 - 5484119
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcga 90  Q
    |||| |||| ||||||| |||||| |||||||||| || || | |||||||  ||||||||||||||| ||||||| ||||||    
T  5484201 cgaataaaacacacacagagacaactaatcacatacaaacacacataaacatgcataataaataattagaataattctagcga 5484119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 19980945 - 19981006
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaa 69  Q
    |||| |||||||||||| |  |||||||||||| | ||||||||| ||||||||||||||||    
T  19980945 cgaataaaatacacacatatgcaattaatcacacataagcatatacaaacacacataataaa 19981006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 9296635 - 9296693
Alignment:
Q  33 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaa 92  Q
    |||||||||| ||||| ||||||| ||||||||||||||| |||||||| | ||||||||    
T  9296635 taatcacatacaagcacatataaatacacataataaataa-taaaataaatctagcgaaa 9296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 9521712 - 9521792
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    ||||||||||||| ||||| |||||||||| || |  ||||||  |||||| |||||| | |||||||||| |||||||||||    
T  9521712 aaaatacacacaatgacaaataatcacatacaaactcatataa--acacatgataaattaataaaataattctagcgaaaaac 9521792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 17013127 - 17013080
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacaca 60  Q
    |||||||||||| || |||||||||||||| ||||| |||||||||||    
T  17013127 aaaatacacacagaggcaattaatcacataaaagcacatataaacaca 17013080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 23301291 - 23301378
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||||||||||| |||| ||| |||| | || || ||  ||| | | ||||||||||| |||||||||| ||||||||||||||||    
T  23301291 aaaatacacacaaacacaagtaagcacacataaacacattcaaaaaaatataataaataaataaaataattctagcgaaaaacgggct 23301378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 18733719 - 18733784
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaat 79  Q
    |||||||| ||| |||||||||||||||||  ||||||  ||||||||||||| ||| |||||||||    
T  18733719 aaaatacagacatagacaattaatcacatacgagcataattaaacacacataa-aaacaattaaaat 18733784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 31467018 - 31466954
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa 78  Q
    |||||||||||| |  |||||||||||||| ||||||||| ||| ||||||| |||| ||||||||    
T  31467018 aaaatacacacagaagcaattaatcacataaaagcatata-aaaaacacatattaaacaattaaaa 31466954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 19176066 - 19176102
Alignment:
Q  27 gacaattaatcacatagaagcatatataaacacacat 63  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  19176066 gacaattaatcacatacaagcataaataaacacacat 19176102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 22460308 - 22460356
Alignment:
Q  47 catatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    |||| ||||||||| ||||| ||||| |||||||||| |||||||||||    
T  22460308 catagataaacacatataattaataaataaaataattctagcgaaaaac 22460356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 31159797 - 31159731
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||||| |  |||||||||||||| ||||||||||||| ||||| || ||| |||||||||||    
T  31159797 aaaatacacacataagcaattaatcacatacaagcatatataaa-acacacaa-aaacaattaaaataa 31159731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 25292 - 25377
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||| ||||| ||||    
T  25292 aaaatacacacacagacaattaatcacatacaagcacatataaaaacacataataaataattaaaataattctagtgaaaatcggg 25377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 29273 - 29225
Alignment:
Q  52 ataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  29273 ataaacacatataataaataattaaaataattatagcaaaaaacaggct 29225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 61849 - 61930
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||||||||||| ||||||||||||||||| || || ||||| |||||||||||||||||||||||||||| ||||||||||    
T  61849 aaaatacacacagagacaattaatcacatataaacaaatatagacacacataataaataattaaaataattctagcgaaaaa 61930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 8613 - 8705
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||| |||||||||||| |||| | |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||| |||||| ||||    
T  8613 cgaataaaatacacacagagacgagtaatcacatacaagcacatataaacacacataataaataattaaaataattctagcaaaaaacaggct 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 11773377 - 11773285
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||| |||||||||||| |||||| || ||||| | ||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  11773377 cgaataaaatacacacagagacaaatagtcacacacaagcacatataaacacacataataaataattaaaataattttaacgaaaaacgggct 11773285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 13761112 - 13761022
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||||||| |||||| |||||||||| ||| | ||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  13761112 cgaataaaatacacacatagacaaataatcacatacaagtacatataaatacacataataaataattaaaataattccagcgaaaaacggg 13761022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 97
Target Start/End: Complemental strand, 3169646 - 3169557
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 97  Q
    ||||||||||||||||||||| || | |||||||  ||  | |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  3169646 cgaagaaaatacacacaaagataaatgatcacatgcaacaacatataaacacacataataaatatttaaaataattctagcgaaaaacgg 3169557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 18083266 - 18083354
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    |||||||||||   || || |||||||||| ||||| ||||||||||| |||||||||||||||||||||| | | |||||||||||||    
T  18083266 aaaatacacactgggaaaaataatcacatacaagcacatataaacacatataataaataattaaaataattctcgggaaaaacgggcta 18083354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 29740639 - 29740550
Alignment:
Q  7 tcgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 97  Q
    ||||| |||||||||||| |||||| |||||||||| || || |||||| ||||||||||| | ||||||||||||| || ||||||||||    
T  29740639 tcgaataaaatacacacatagacaaataatcacataaaa-cacatataagcacacataatagacaattaaaataattctaacgaaaaacgg 29740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 16095580 - 16095664
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||||||||| |||  ||| | || || ||||||||||||||||  |||||||||||||||| |||| |||||||||    
T  16095580 aaatacacacaaagacaactaagtacaaacaaacacatataaacacacataaataataattaaaataattctagctaaaaacggg 16095664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 17923282 - 17923370
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa-taattatagcgaaaaacgggcta 101  Q
    |||||||||||| |||||||||||||||||  |||||| |||||||||||| | ||| |||||||| ||| | ||||||||| |||||||    
T  17923282 aaaatacacacatagacaattaatcacatacgagcataaataaacacacatta-aaacaattaaaattaaatctagcgaaaatcgggcta 17923370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 18363174 - 18363089
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| || ||| |||||||||| ||||| ||||||||| | |||||||| || |||||||| |||||| |||| ||||    
T  18363174 aaaatacacacataggcaaataatcacatacaagcacatataaacatatataataaaaaaataaaataaatatagcaaaaatcggg 18363089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 16197719 - 16197767
Alignment:
Q  50 atataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||||    
T  16197719 atataaacacatataataaataattaaaataattctaacgaaaaacggg 16197767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 19070663 - 19070750
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    |||||||||||| ||||||  |||||||||  |||||| |||||||||||||| ||| ||||||||||| | || |||||| |||||||    
T  19070663 aaaatacacacatagacaaacaatcacatacgagcataaataaacacacataa-aaacaattaaaataaatctaacgaaaatcgggcta 19070750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 5546 - 5630
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| || ||| |||||||||  |||| || ||||||||||||||||||||| |||||||| | ||||| ||| ||||    
T  5546 aaaatacacacagaggcaaataatcacatgcaagcttaaataaacacacataataaataa-taaaataaatctagcgtaaatcggg 5630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 4485521 - 4485573
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataa 65  Q
    |||||||||||| || |||||||||||||| ||||||||| ||||||| ||||    
T  4485521 aaaatacacacagaggcaattaatcacataaaagcatataaaaacacatataa 4485573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 8326516 - 8326472
Alignment:
Q  54 aaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  8326516 aaacactcataataaataatgaaaataattctagcgaaaaacggg 8326472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 13146672 - 13146717
Alignment:
Q  52 ataaacacacataataaataattaaaataattatagcgaaaaacgg 97  Q
    ||||||||| |||||||||||||||||||||| || | ||||||||    
T  13146672 ataaacacatataataaataattaaaataattctatcaaaaaacgg 13146717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 17160157 - 17160102
Alignment:
Q  44 aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    ||||| ||| |||||||||||| |||||| |||||||||| || |||||||||||||    
T  17160157 aagcacatacaaacacacataa-aaataaataaaataattctaacgaaaaacgggct 17160102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0964 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0964
Description:

Target: scaffold0964; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 2915 - 3008
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    |||| ||||||||||||||||||| |||||| ||| ||||| ||||||||| ||| |||||||||||||| ||||| ||| |||||||||||||    
T  2915 cgaataaaatacacacaaagacaaataatcagatacaagcacatataaacatacaaaataaataattaaattaattctagtgaaaaacgggcta 3008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 77993 - 78076
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    |||||||||||| |||||| |||||||||| |||||  |||||| ||||||||||||||||||||| |||| ||||||||||||    
T  77993 aaaatacacacacagacaaataatcacatacaagcacctataaatacacataataaataattaaaagaattctagcgaaaaacg 78076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 20511061 - 20511148
Alignment:
Q  7 tcgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    ||||| ||||||| |||  ||||||||||||||||| || || ||||||||| |||||||||||||||||||||||| ||||||||||    
T  20511061 tcgaataaaatacgcaccgagacaattaatcacatacaaacacatataaacatacataataaataattaaaataattctagcgaaaaa 20511148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 18995989 - 18996079
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||| ||||||| |||||| |||||| ||| ||||| | ||||||||||||||||| |||||||||||| ||| ||||||| ||||    
T  18995989 cgaataaaaaacacacagagacaaataatcatatacaagcacaaataaacacacataataattaattaaaataactattgcgaaaatcggg 18996079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 24282364 - 24282453
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||| ||| | ||||||||||||| ||| ||||| |||||| |||| |||||||||||||||||||||| ||| ||||||||||    
T  24282364 cgaataaaatatacaaagagacaattaatcatatacaagcacatataa-cacaaataataaataattaaaataattttagtgaaaaacggg 24282453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 28774988 - 28775072
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||||||||||| |||||| |||||| ||| || || |||||| ||||| ||||||||||||||||| ||| ||||||||||||||    
T  28774988 aaaatacacacacagacaaataatcatatacaaacacatataatcacacgtaataaataattaaaat-attctagcgaaaaacggg 28775072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 19285328 - 19285397
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataatt 83  Q
    |||||||||||| ||||||||||||||| | || |  |||||| |||||||||||||||||||||||||||    
T  19285328 aaaatacacacagagacaattaatcacacacaaacgcatataa-cacacataataaataattaaaataatt 19285397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 19901751 - 19901698
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataat 66  Q
    |||||||||||||||| ||||||||||||| ||| | |||||||||||||||||    
T  19901751 aaaatacacacaaagaaaattaatcacatacaagaacatataaacacacataat 19901698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 24699353 - 24699272
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||||| |||||||| ||||||| |||| | ||  | ||||||||||| |||||||||||||||||||||| || |||||||    
T  24699353 aaaatatacacaaaggcaattaagcacacataaatacatataaacacatataataaataattaaaataattctatcgaaaaa 24699272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 21654960 - 21655047
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||||||||| | |||| || ||||| | ||||  |||||| |||||||||||||||||||| |||||| |||| |||||| ||||    
T  21654960 aaaatacacacagatacaaatagtcacacacaagcgcatataatcacacataataaataattaagataattttagcaaaaaacaggct 21655047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 24690002 - 24689915
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||| |||||||| ||||||| |||| | ||  | ||||| ||||| |||||||||||||||||||||| || ||||||| |||||    
T  24690002 aaaatatacacaaaggcaattaagcacacataaatacatatatacacatataataaataattaaaataattctatcgaaaaatgggct 24689915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 27354277 - 27354340
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaata 71  Q
    |||| |||||| ||||| |||||||||||| || | ||||| ||||||||||| ||||||||||    
T  27354277 cgaataaaatatacacagagacaattaatctcacacaagcacatataaacacatataataaata 27354340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 34133642 - 34133550
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaat-cacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    |||| |||||||||| | ||||||||||| |||||| |  || |||||| ||| ||||| ||||||||||||||||| || |||||| |||||||    
T  34133642 cgaataaaatacacaaatagacaattaatgcacataaa--cacatataagcacgcataacaaataattaaaataattctaacgaaaatcgggcta 34133550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 21909496 - 21909410
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    ||||||||||| | |||| |||| ||| | |  || ||||||||||| |||||||||||||||||||||| || | ||||| |||||    
T  21909496 aaatacacacataaacaaataatgacacatagacacatataaacacatataataaataattaaaataattctatctaaaaatgggct 21909410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45572875 - 45572808
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45572875 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45572808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45576542 - 45576475
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45576542 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45576475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45580209 - 45580142
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45580209 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45580142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45583876 - 45583809
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45583876 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45583809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45587543 - 45587476
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45587543 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45587476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45591210 - 45591143
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45591210 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45591143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45594877 - 45594810
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45594877 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45594810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45598544 - 45598477
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45598544 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45598477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45602211 - 45602144
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45602211 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45602144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45605878 - 45605811
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45605878 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45605811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45609545 - 45609478
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45609545 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45609478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45613212 - 45613145
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45613212 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45613145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 45616879 - 45616812
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||| | || ||||||||||||||  |||| ||||||||||| |||| || ||||||||||||    
T  45616879 aaaatacacatagaggcaattaatcacatacgagcacatataaacacatataa-aattaattaaaataa 45616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 16571910 - 16572000
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    |||| |||||||| ||| |||||||||||||||||  || | ||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  16571910 cgaataaaatacatacatagacaattaatcacatacgaggacatataaatacacataataaataattaaattaatcatagcgaaaaacggg 16572000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 21982710 - 21982793
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    |||||||||||||||| || |||||| ||| ||||| |||||| |||||||||||||||| |||||||||| || |||||||||    
T  21982710 aaaatacacacaaagataaataatcatatacaagcacatataagcacacataataaataaataaaataattctaacgaaaaacg 21982793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 28801546 - 28801630
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||| |||||||||||| |||||| || ||| ||| ||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  28801546 cgaacaaaatacacacagagacaaata-tcatatacaagcacatataaacacacataataattaattaaaataattctagcgaaaa 28801630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 9273385 - 9273466
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    ||||||||||| ||||||||||||| | | || |||||| ||||| |||||||||| ||||||| ||||| |||| ||||||    
T  9273385 aaatacacacagagacaattaatcaaacataaacatatagaaacaaacataataaacaattaaattaattctagctaaaaac 9273466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 15712171 - 15712258
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacaca--taataaataattaaaataattatagcgaaaaacggg 98  Q
    ||||||||||||||| |||||||||||| | |||||  |||||||||| |   ||||||||| |||||||||| || |||||||||||    
T  15712171 aaaatacacacaaaggcaattaatcacacacaagcacttataaacacataataaataaataaataaaataattctaacgaaaaacggg 15712258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 9652748 - 9652827
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||||||||||| ||||||||| ||||||| ||||| ||||||  |||||||| || |||||||||||| | || |||||||    
T  9652748 aaaatacacacagagacaattagtcacataaaagcacatataa--acacataaaaattaattaaaataaatctaacgaaaaa 9652827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 11777004 - 11777046
Alignment:
Q  52 ataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  11777004 ataaacacacataataaatagttaaaataattctagcgaaaaa 11777046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 9253414 - 9253495
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    ||||| ||||| ||||||||||||| | | || |||||||||||| ||||||||||| ||| || ||||| |||| ||||||    
T  9253414 aaatagacacagagacaattaatcatacataaacatatataaacaaacataataaatcatttaattaattctagctaaaaac 9253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 16684900 - 16684957
Alignment:
Q  44 aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggcta 101  Q
    ||||| ||||||||||| | || |||||| |||||||||| |||||||||||||||||    
T  16684900 aagcacatataaacacataaaacaaataaataaaataattctagcgaaaaacgggcta 16684957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 6942935 - 6942864
Alignment:
Q  7 tcgaagaaaatacacacaaagacaattaatcacataga--agcatatataaacacacataataaataattaa 76  Q
    ||||| |||||||| ||| |||||| |||||||| | |  |||| |||||||||||||||||||||||||||    
T  6942935 tcgaataaaatacatacagagacaaataatcacacacacaagcacatataaacacacataataaataattaa 6942864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 12334054 - 12333994
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataat 73  Q
    |||||||||||| ||||||||||||||| | |  || ||||||||||||||||||| ||||    
T  12334054 aaaatacacacatagacaattaatcacaaacagacacatataaacacacataataattaat 12333994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 9567330 - 9567397
Alignment:
Q  26 agacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||| |||||||||| |  || |||||| |||||||||||| |||||||||||||| ||| |||||    
T  9567330 agacaaataatcacatacagacacatataaccacacataataattaattaaaataattctagtgaaaa 9567397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 95
Target Start/End: Original strand, 19890336 - 19890418
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaac 95  Q
    ||||||||||||| || || ||| |||||| || ||   ||||||||  |||||||||||| ||||||||| |||||||||||    
T  19890336 aaaatacacacaaggataaataagcacatacaaacacgcataaacacctataataaataataaaaataattctagcgaaaaac 19890418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 23269315 - 23269250
Alignment:
Q  35 atcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||| | ||||| |||||||||||||  | || |||||||||||| ||||||||||| ||||||    
T  23269315 atcacacacaagcacatataaacacacaataaaagtaattaaaataaatatagcgaaaatcgggct 23269250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 202286 - 202204
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacg 96  Q
    |||||||||||| |||||| || ||||||| ||||| ||||||| |||||||||||||||||||||||||| || |||||||||    
T  202286 aaaatacacacagagacaaata-tcacatacaagcacatataaatacacataataaataattaaaataattctatcgaaaaacg 202204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 204159 - 204092
Alignment:
Q  33 taatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    |||||||| | || ||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  204159 taatcacacacaaacatatataaacacacataataaataattaaaataattctaacgaaaaacgggct 204092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 17784 - 17701
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 97  Q
    ||||||||||||||||||| |||||||| | |||   |||||| |||| |||||||||||||||||||||| |||||||||||||    
T  17784 aaaatacacacaaagacaaataatcacacacaagtgcatataa-cacatataataaataattaaaataattctagcgaaaaacgg 17701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 19658 - 19737
Alignment:
Q  14 aaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||||  |||||||| |||| || ||||| ||||||||||||||||||| |||||||||||||| ||| |||||    
T  19658 aaatacacacagtgacaattattcacttacaagcagatataaacacacataataattaattaaaataattctagggaaaa 19737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 19818 - 19897
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaa 92  Q
    ||||||||||||  |||||||||||||| | || || ||||||||||| |||||||||||||||||||||| || |||||    
T  19818 aaaatacacacatggacaattaatcacacataaacacatataaacacatataataaataattaaaataattctaacgaaa 19897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 100
Target Start/End: Complemental strand, 370774 - 370687
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    ||||||||||||  |||||||||||||| | || ||  |||||||||| |||||||| ||||||||||||| |||||||||| |||||    
T  370774 aaaatacacacagggacaattaatcacacataaacacgtataaacacatataataaacaattaaaataattctagcgaaaaatgggct 370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 13963 - 14031
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataa 81  Q
    |||||||||||| || |||||||||||||||||||| ||||||||| | |||||||  |||||||||||    
T  13963 aaaatacacacagaggcaattaatcacatagaagcacatataaacatatataataatgaattaaaataa 14031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 2192 - 2111
Alignment:
Q  12 gaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||| | |||| ||||||| ||||||| | || |||||||    
T  2192 gaaaatacacacagagacaattaatcacatataagcacatataaacatatataa-aaataataaaaataaatgtaacgaaaaa 2111  T

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Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 42423 - 42367
Alignment:
Q  44 aagcatatataaacacacataataaataattaaaataattatagcgaaaaacgggct 100  Q
    ||||| ||| || |||| |||||||||||||||||||||| ||||||||||||||||    
T  42423 aagcacatacaaccacatataataaataattaaaataattctagcgaaaaacgggct 42367  T

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Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 73540 - 73628
Alignment:
Q  7 tcgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaacgg 97  Q
    ||||| |||||||||||| | |||| |||| ||| | ||||| ||||||||||||  ||||||||  |||||||||| |||||||||||||    
T  73540 tcgaataaaatacacacagaaacaaataatgacacacaagcacatataaacacac--aataaatatataaaataattctagcgaaaaacgg 73628  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 8755 - 8817
Alignment:
Q  31 attaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaa 93  Q
    |||||||||||| ||||||| |||||||||||||||||  ||| ||||||| | |||||||||    
T  8755 attaatcacatacaagcataaataaacacacataataacaaataaaaataaatctagcgaaaa 8817  T

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Target: scaffold0305 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 10299 - 10348
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacaca 62  Q
    |||||||||||| ||||||||||||||| | ||||| |||||||||||||    
T  10299 aaaatacacacatagacaattaatcacagacaagcacatataaacacaca 10348  T

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Target: scaffold0183 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 11822 - 11886
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaa 78  Q
    ||||||||||||||| |||||||||||||  ||||| ||||||||||| || | ||||||||||||    
T  11822 aaaatacacacaaaggcaattaatcacatttaagcagatataaacacatatta-aaataattaaaa 11886  T

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Target: scaffold0183; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 20109 - 20164
Alignment:
Q  8 cgaagaaaatacacacaaagacaattaatcacatagaagcatatataaacacacat 63  Q
    |||| ||||||| ||||||||||| |||||||||| ||||| ||||||||| ||||    
T  20109 cgaataaaatacgcacaaagacaaataatcacatacaagcacatataaacatacat 20164  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 6527 - 6439
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataatt-aaaataattatagcgaaaaacgggcta 101  Q
    |||||||||||| || ||||||||||||||  |||||| | |||||||||||| ||| |||| ||||||| | ||||||||| |||||||    
T  6527 aaaatacacacataggcaattaatcacatacgagcataaacaaacacacataa-aaacaattaaaaataaatctagcgaaaatcgggcta 6439  T

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Target: scaffold0331 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 5252 - 5200
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataa 65  Q
    |||||||||||| || |||||||||||| | ||||| ||||||||||||||||    
T  5252 aaaatacacacagaggcaattaatcacaaacaagcacatataaacacacataa 5200  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 151271 - 151223
Alignment:
Q  50 atataaacacacataataaataattaaaataattatagcgaaaaacggg 98  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||    
T  151271 atataaacatacataaaaattaattaaaataattatagcaaaaaacggg 151223  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 155616 - 155658
Alignment:
Q  52 ataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    ||||||||  |||||||||||||||||||||| ||||||||||    
T  155616 ataaacacgtataataaataattaaaataattctagcgaaaaa 155658  T

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Target: scaffold0133 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 26105 - 26152
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacaca 60  Q
    |||||||||||| || |||||||||||||| ||||| |||||||||||    
T  26105 aaaatacacacagaggcaattaatcacataaaagcacatataaacaca 26152  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 109106 - 109148
Alignment:
Q  50 atataaacacacataataaataattaaaataattatagcgaaa 92  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||    
T  109106 atataaacacatataataattaattaaaataattctagcgaaa 109148  T

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Target: scaffold0233 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 94
Target Start/End: Original strand, 16412 - 16493
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacacataataaataattaaaataattatagcgaaaaa 94  Q
    |||| ||||||||||||||  ||| ||| | |||   ||||||||||||||||||||||  ||||||| || ||||||||||    
T  16412 aaaacacacacaaagacaaacaatgacacacaagtgcatataaacacacataataaatatctaaaatagttctagcgaaaaa 16493  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 3491 - 3539
Alignment:
Q  13 aaaatacacacaaagacaattaatcacatagaagcatatataaacacac 61  Q
    ||||||||||||||| ||||||||||||||  | |||| ||||||||||    
T  3491 aaaatacacacaaaggcaattaatcacatacgatcataaataaacacac 3539  T

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