View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3124_high_2 (Length: 392)

Name: NF3124_high_2
Description: NF3124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3124_high_2
NF3124_high_2
[»] chr4 (50 HSPs)
chr4 (1-392)||(54392608-54392999)
chr4 (57-163)||(55414438-55414545)
chr4 (52-164)||(3155543-3155656)
chr4 (53-164)||(17884009-17884121)
chr4 (48-164)||(40174501-40174616)
chr4 (82-163)||(50681107-50681188)
chr4 (47-155)||(56480283-56480392)
chr4 (59-164)||(51630058-51630164)
chr4 (48-164)||(6364085-6364202)
chr4 (47-137)||(25885794-25885885)
chr4 (66-164)||(28300316-28300415)
chr4 (87-162)||(35571650-35571725)
chr4 (82-156)||(17822890-17822964)
chr4 (50-84)||(25487643-25487677)
chr4 (48-101)||(26520309-26520363)
chr4 (51-163)||(50662756-50662863)
chr4 (50-164)||(53137977-53138090)
chr4 (82-155)||(9760411-9760484)
chr4 (50-142)||(27043869-27043962)
chr4 (50-109)||(7601697-7601757)
chr4 (81-129)||(21523529-21523577)
chr4 (50-101)||(30338672-30338724)
chr4 (61-164)||(54069434-54069538)
chr4 (85-156)||(437269-437340)
chr4 (50-81)||(2980572-2980603)
chr4 (48-114)||(2987125-2987192)
chr4 (57-139)||(3070015-3070098)
chr4 (47-137)||(52746884-52746973)
chr4 (87-163)||(55064809-55064887)
chr4 (50-163)||(2996511-2996625)
chr4 (50-84)||(4191677-4191711)
chr4 (50-103)||(23503497-23503551)
chr4 (58-163)||(29388560-29388666)
chr4 (50-84)||(47970256-47970290)
chr4 (51-97)||(54986361-54986407)
chr4 (50-137)||(679192-679281)
chr4 (49-101)||(30024637-30024690)
chr4 (11-84)||(34213692-34213765)
chr4 (51-84)||(51044557-51044590)
chr4 (51-84)||(52645847-52645880)
chr4 (82-163)||(53294132-53294213)
chr4 (48-134)||(2733256-2733344)
chr4 (54-101)||(7731712-7731760)
chr4 (51-94)||(21683566-21683610)
chr4 (95-163)||(21731674-21731742)
chr4 (50-101)||(24160928-24160980)
chr4 (60-163)||(29912897-29913000)
chr4 (55-102)||(34368820-34368868)
chr4 (57-109)||(41336706-41336758)
chr4 (50-90)||(53155203-53155242)
[»] chr1 (70 HSPs)
chr1 (57-163)||(24915069-24915176)
chr1 (48-164)||(4445644-4445761)
chr1 (51-164)||(7472251-7472364)
chr1 (52-168)||(37842368-37842485)
chr1 (82-159)||(17603406-17603483)
chr1 (54-163)||(27820355-27820464)
chr1 (57-163)||(47432041-47432147)
chr1 (50-156)||(49888705-49888812)
chr1 (89-163)||(3234033-3234107)
chr1 (82-163)||(473135-473216)
chr1 (54-122)||(38578469-38578538)
chr1 (59-163)||(1510328-1510432)
chr1 (84-164)||(2294884-2294964)
chr1 (50-113)||(34619446-34619510)
chr1 (93-164)||(2777874-2777945)
chr1 (50-164)||(29793720-29793835)
chr1 (82-164)||(17778929-17779010)
chr1 (82-164)||(34290207-34290289)
chr1 (50-98)||(4549804-4549853)
chr1 (58-129)||(30191937-30192010)
chr1 (52-168)||(34952155-34952272)
chr1 (82-163)||(37631577-37631658)
chr1 (86-163)||(41195211-41195288)
chr1 (61-164)||(42174806-42174908)
chr1 (49-101)||(50319229-50319282)
chr1 (50-93)||(172665-172709)
chr1 (56-139)||(6265038-6265122)
chr1 (50-101)||(15687153-15687205)
chr1 (86-142)||(27976570-27976626)
chr1 (50-101)||(48748663-48748714)
chr1 (50-92)||(2462905-2462948)
chr1 (51-101)||(4256122-4256173)
chr1 (50-163)||(7137016-7137133)
chr1 (45-164)||(7244675-7244794)
chr1 (53-123)||(9572166-9572237)
chr1 (51-101)||(36151585-36151636)
chr1 (57-155)||(37517220-37517319)
chr1 (57-164)||(38882929-38883035)
chr1 (62-129)||(46423329-46423395)
chr1 (50-103)||(7028230-7028284)
chr1 (82-164)||(7218091-7218173)
chr1 (63-156)||(9656601-9656695)
chr1 (50-84)||(13037802-13037836)
chr1 (55-101)||(28389153-28389199)
chr1 (98-164)||(45975677-45975743)
chr1 (52-156)||(1432455-1432560)
chr1 (82-142)||(3069973-3070034)
chr1 (48-92)||(4700155-4700200)
chr1 (50-94)||(6976886-6976931)
chr1 (57-113)||(13809943-13810000)
chr1 (82-163)||(14576672-14576752)
chr1 (51-84)||(15437902-15437935)
chr1 (51-84)||(23895275-23895308)
chr1 (57-101)||(26293186-26293231)
chr1 (62-142)||(26630413-26630494)
chr1 (60-164)||(31517757-31517862)
chr1 (53-101)||(37841939-37841988)
chr1 (9-77)||(38635650-38635719)
chr1 (85-142)||(41505660-41505717)
chr1 (51-111)||(45145165-45145226)
chr1 (11-72)||(46423153-46423214)
chr1 (50-102)||(46499933-46499986)
chr1 (82-163)||(51695513-51695593)
chr1 (59-169)||(1509977-1510088)
chr1 (48-153)||(7069236-7069343)
chr1 (50-129)||(36070188-36070268)
chr1 (50-101)||(38651489-38651541)
chr1 (48-107)||(46252756-46252816)
chr1 (50-98)||(49373769-49373817)
chr1 (54-101)||(49517012-49517060)
[»] chr8 (34 HSPs)
chr8 (50-164)||(37353266-37353380)
chr8 (12-164)||(18930602-18930755)
chr8 (57-163)||(26771210-26771317)
chr8 (50-164)||(10114428-10114542)
chr8 (87-163)||(27028807-27028883)
chr8 (48-164)||(27049304-27049419)
chr8 (82-156)||(38602304-38602378)
chr8 (49-101)||(42597338-42597391)
chr8 (51-122)||(4558737-4558809)
chr8 (50-101)||(37444495-37444547)
chr8 (50-123)||(1112791-1112865)
chr8 (51-103)||(7646145-7646198)
chr8 (50-102)||(14482140-14482193)
chr8 (50-94)||(26215434-26215479)
chr8 (49-81)||(37220253-37220285)
chr8 (50-141)||(38036152-38036244)
chr8 (51-102)||(40598932-40598984)
chr8 (50-164)||(7514516-7514631)
chr8 (50-101)||(8536129-8536180)
chr8 (63-129)||(16733980-16734047)
chr8 (51-101)||(31915349-31915400)
chr8 (52-101)||(13561392-13561442)
chr8 (53-102)||(32976358-32976408)
chr8 (50-103)||(37152968-37153022)
chr8 (61-142)||(42043384-42043466)
chr8 (48-156)||(3936785-3936894)
chr8 (52-164)||(7918790-7918903)
chr8 (115-164)||(11569474-11569523)
chr8 (82-163)||(18133627-18133708)
chr8 (51-84)||(44617885-44617918)
chr8 (62-113)||(10758324-10758376)
chr8 (57-120)||(12497292-12497356)
chr8 (48-84)||(16163376-16163412)
chr8 (54-141)||(30627942-30628030)
[»] chr3 (56 HSPs)
chr3 (52-155)||(36189506-36189610)
chr3 (50-141)||(35127411-35127503)
chr3 (50-164)||(402559-402673)
chr3 (57-142)||(30956665-30956751)
chr3 (57-142)||(30972477-30972563)
chr3 (48-156)||(44061048-44061157)
chr3 (83-163)||(39980701-39980781)
chr3 (51-101)||(2128331-2128382)
chr3 (57-156)||(20880422-20880521)
chr3 (51-164)||(36783351-36783466)
chr3 (50-164)||(39602227-39602341)
chr3 (64-155)||(46886718-46886808)
chr3 (82-163)||(30443864-30443945)
chr3 (90-163)||(47132310-47132383)
chr3 (51-164)||(21367611-21367720)
chr3 (57-163)||(35959474-35959581)
chr3 (58-156)||(36631076-36631175)
chr3 (57-101)||(15304427-15304472)
chr3 (82-163)||(20170494-20170575)
chr3 (51-96)||(27896263-27896308)
chr3 (53-101)||(42809242-42809291)
chr3 (55-163)||(52618946-52619055)
chr3 (47-79)||(20669559-20669591)
chr3 (89-153)||(49034291-49034355)
chr3 (57-163)||(3845580-3845687)
chr3 (54-156)||(14145854-14145957)
chr3 (47-101)||(21661449-21661504)
chr3 (56-102)||(42808923-42808970)
chr3 (53-84)||(44284156-44284187)
chr3 (52-102)||(45535361-45535412)
chr3 (49-84)||(48528515-48528550)
chr3 (55-141)||(50952277-50952363)
chr3 (52-101)||(1395611-1395661)
chr3 (59-156)||(2719416-2719513)
chr3 (48-98)||(23815989-23816038)
chr3 (48-137)||(25447288-25447378)
chr3 (56-137)||(32095235-32095317)
chr3 (50-84)||(34759625-34759659)
chr3 (51-104)||(36445671-36445725)
chr3 (50-84)||(42039097-42039131)
chr3 (50-84)||(43079680-43079714)
chr3 (57-101)||(10101556-10101601)
chr3 (57-101)||(10212481-10212526)
chr3 (82-123)||(20257506-20257547)
chr3 (48-101)||(35328244-35328297)
chr3 (49-101)||(40122832-40122885)
chr3 (50-90)||(41028942-41028983)
chr3 (53-101)||(51278237-51278286)
chr3 (57-156)||(16073068-16073168)
chr3 (48-76)||(20669115-20669143)
chr3 (50-102)||(25185931-25185983)
chr3 (51-134)||(38462220-38462304)
chr3 (48-84)||(44014216-44014252)
chr3 (50-101)||(44374724-44374776)
chr3 (49-128)||(47217294-47217374)
chr3 (47-75)||(47319376-47319404)
[»] chr5 (50 HSPs)
chr5 (50-164)||(12425509-12425624)
chr5 (50-156)||(39105402-39105509)
chr5 (52-164)||(4014441-4014554)
chr5 (48-164)||(7674584-7674701)
chr5 (50-156)||(9202773-9202880)
chr5 (48-142)||(34736566-34736660)
chr5 (56-102)||(43215323-43215369)
chr5 (48-129)||(1619028-1619108)
chr5 (48-103)||(465890-465946)
chr5 (82-142)||(32372595-32372655)
chr5 (81-129)||(32859770-32859818)
chr5 (81-129)||(32861942-32861990)
chr5 (81-129)||(32862726-32862774)
chr5 (57-164)||(39594753-39594860)
chr5 (49-99)||(4855635-4855686)
chr5 (47-101)||(10771961-10772013)
chr5 (57-163)||(29925786-29925893)
chr5 (50-163)||(6593238-6593351)
chr5 (50-162)||(11700100-11700214)
chr5 (51-101)||(12460081-12460131)
chr5 (51-93)||(14714928-14714970)
chr5 (57-155)||(16458005-16458103)
chr5 (52-101)||(42583089-42583139)
chr5 (82-163)||(16937901-16937982)
chr5 (58-163)||(25461038-25461143)
chr5 (58-101)||(10363696-10363740)
chr5 (50-90)||(18704127-18704167)
chr5 (48-103)||(19460464-19460520)
chr5 (95-163)||(23994734-23994802)
chr5 (50-164)||(1465037-1465151)
chr5 (50-97)||(14674985-14675032)
chr5 (59-169)||(25461328-25461438)
chr5 (57-160)||(25461668-25461771)
chr5 (50-156)||(42582850-42582957)
chr5 (50-84)||(1773523-1773557)
chr5 (50-84)||(7096225-7096259)
chr5 (95-164)||(7984952-7985022)
chr5 (50-84)||(13224367-13224401)
chr5 (50-84)||(29588818-29588852)
chr5 (50-103)||(37112336-37112390)
chr5 (50-99)||(39128577-39128627)
chr5 (50-123)||(40452229-40452303)
chr5 (50-141)||(42573814-42573911)
chr5 (50-114)||(5377267-5377332)
chr5 (57-156)||(7319033-7319136)
chr5 (56-100)||(7853602-7853647)
chr5 (56-156)||(10639897-10639998)
chr5 (51-84)||(12407759-12407792)
chr5 (50-129)||(16889673-16889753)
chr5 (52-123)||(36796764-36796836)
[»] chr2 (45 HSPs)
chr2 (57-163)||(12464491-12464598)
chr2 (50-168)||(4026755-4026874)
chr2 (51-164)||(42457887-42458001)
chr2 (57-163)||(43279547-43279652)
chr2 (53-163)||(18066069-18066180)
chr2 (83-156)||(41851507-41851580)
chr2 (50-156)||(3611164-3611271)
chr2 (49-163)||(29316793-29316908)
chr2 (57-163)||(41241150-41241257)
chr2 (50-123)||(5133710-5133784)
chr2 (51-101)||(29430695-29430745)
chr2 (48-129)||(39567839-39567921)
chr2 (86-163)||(33319830-33319907)
chr2 (53-101)||(40837508-40837557)
chr2 (50-101)||(3673745-3673797)
chr2 (57-155)||(41407246-41407346)
chr2 (47-163)||(9174749-9174867)
chr2 (52-102)||(19629239-19629290)
chr2 (52-102)||(19826140-19826191)
chr2 (108-163)||(26202025-26202080)
chr2 (82-161)||(39073709-39073788)
chr2 (57-163)||(45229457-45229563)
chr2 (56-165)||(656793-656903)
chr2 (82-164)||(1625871-1625953)
chr2 (86-164)||(26626848-26626926)
chr2 (56-101)||(29633016-29633062)
chr2 (50-103)||(36114601-36114655)
chr2 (50-84)||(41033048-41033082)
chr2 (56-101)||(42907303-42907349)
chr2 (91-164)||(680483-680556)
chr2 (50-142)||(3102631-3102724)
chr2 (82-163)||(10490600-10490681)
chr2 (51-84)||(27288318-27288351)
chr2 (51-84)||(38239649-38239682)
chr2 (50-129)||(2416251-2416331)
chr2 (54-101)||(3227741-3227789)
chr2 (53-101)||(7193933-7193981)
chr2 (54-101)||(7825194-7825242)
chr2 (50-141)||(10143110-10143202)
chr2 (50-78)||(15288710-15288738)
chr2 (50-101)||(18962118-18962170)
chr2 (50-101)||(32098388-32098440)
chr2 (50-101)||(33267596-33267648)
chr2 (56-103)||(40758967-40759015)
chr2 (50-109)||(42420366-42420426)
[»] chr6 (39 HSPs)
chr6 (54-155)||(31624200-31624302)
chr6 (57-161)||(6909892-6909998)
chr6 (50-164)||(9093573-9093688)
chr6 (78-163)||(34430479-34430564)
chr6 (50-164)||(6647327-6647440)
chr6 (56-156)||(2735013-2735114)
chr6 (58-163)||(35098981-35099089)
chr6 (50-141)||(6654553-6654645)
chr6 (50-133)||(29274277-29274361)
chr6 (48-164)||(31624020-31624143)
chr6 (93-163)||(6536597-6536667)
chr6 (76-142)||(11784069-11784135)
chr6 (51-164)||(27893986-27894099)
chr6 (57-145)||(24626240-24626329)
chr6 (50-113)||(507158-507222)
chr6 (49-103)||(430454-430509)
chr6 (51-101)||(24836279-24836330)
chr6 (51-141)||(33787785-33787876)
chr6 (106-164)||(835266-835324)
chr6 (86-164)||(836558-836636)
chr6 (50-163)||(4006652-4006766)
chr6 (50-84)||(4247732-4247766)
chr6 (50-84)||(10452458-10452492)
chr6 (50-84)||(31461616-31461650)
chr6 (50-84)||(31668783-31668817)
chr6 (48-97)||(33736774-33736824)
chr6 (51-164)||(35094944-35095058)
chr6 (84-161)||(6538485-6538562)
chr6 (54-102)||(8349743-8349792)
chr6 (47-84)||(24476537-24476574)
chr6 (50-79)||(33069629-33069658)
chr6 (48-156)||(33117478-33117586)
chr6 (51-84)||(33500579-33500612)
chr6 (54-141)||(2206532-2206620)
chr6 (57-140)||(8147647-8147731)
chr6 (50-101)||(9559621-9559673)
chr6 (50-90)||(10836759-10836799)
chr6 (62-142)||(12836376-12836456)
chr6 (82-162)||(20368199-20368279)
[»] chr7 (48 HSPs)
chr7 (56-164)||(33678724-33678833)
chr7 (84-163)||(46280290-46280369)
chr7 (82-164)||(44821930-44822012)
chr7 (54-102)||(43152981-43153030)
chr7 (50-134)||(5369738-5369821)
chr7 (60-163)||(37064482-37064586)
chr7 (60-163)||(39279910-39280014)
chr7 (51-102)||(49060479-49060531)
chr7 (57-163)||(420305-420412)
chr7 (96-163)||(43648225-43648292)
chr7 (54-156)||(47177578-47177681)
chr7 (52-101)||(6824858-6824908)
chr7 (48-169)||(39907739-39907861)
chr7 (86-156)||(40252132-40252202)
chr7 (48-164)||(2767195-2767312)
chr7 (82-163)||(17944361-17944442)
chr7 (86-163)||(20269551-20269628)
chr7 (51-103)||(28613612-28613665)
chr7 (51-102)||(2223087-2223139)
chr7 (50-156)||(17248491-17248598)
chr7 (50-101)||(35536045-35536097)
chr7 (84-156)||(43694595-43694667)
chr7 (82-157)||(15309589-15309664)
chr7 (50-164)||(28165029-28165144)
chr7 (51-101)||(30496643-30496694)
chr7 (50-101)||(33894561-33894612)
chr7 (63-129)||(34083577-34083644)
chr7 (57-139)||(39279708-39279791)
chr7 (118-165)||(47130801-47130848)
chr7 (48-123)||(47795893-47795967)
chr7 (82-156)||(20526417-20526491)
chr7 (50-164)||(33673016-33673130)
chr7 (50-107)||(40009408-40009466)
chr7 (48-113)||(42656451-42656517)
chr7 (58-129)||(48507667-48507740)
chr7 (53-101)||(2894758-2894807)
chr7 (57-155)||(4970819-4970913)
chr7 (63-164)||(22283761-22283862)
chr7 (53-101)||(28178910-28178959)
chr7 (51-84)||(28702699-28702732)
chr7 (50-118)||(33871202-33871271)
chr7 (51-84)||(35809002-35809035)
chr7 (82-123)||(45264066-45264107)
chr7 (50-109)||(8960699-8960759)
chr7 (58-161)||(19022605-19022709)
chr7 (61-156)||(40689011-40689107)
chr7 (116-156)||(44989703-44989743)
chr7 (50-101)||(45593799-45593851)
[»] scaffold0024 (2 HSPs)
scaffold0024 (48-155)||(21311-21412)
scaffold0024 (50-101)||(27514-27566)
[»] scaffold0654 (1 HSPs)
scaffold0654 (50-101)||(6717-6769)
[»] scaffold0014 (1 HSPs)
scaffold0014 (50-101)||(116636-116688)
[»] scaffold0590 (1 HSPs)
scaffold0590 (50-84)||(1172-1206)
[»] scaffold0508 (1 HSPs)
scaffold0508 (50-84)||(9873-9907)
[»] scaffold0275 (1 HSPs)
scaffold0275 (50-84)||(2769-2803)
[»] scaffold0103 (1 HSPs)
scaffold0103 (52-101)||(51508-51558)
[»] scaffold0019 (1 HSPs)
scaffold0019 (50-84)||(104232-104266)
[»] scaffold0018 (1 HSPs)
scaffold0018 (82-164)||(178342-178424)
[»] scaffold0459 (1 HSPs)
scaffold0459 (49-78)||(8278-8307)
[»] scaffold0366 (1 HSPs)
scaffold0366 (49-78)||(8202-8231)


Alignment Details
Target: chr4 (Bit Score: 337; Significance: 0; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 392
Target Start/End: Complemental strand, 54392999 - 54392608
Alignment:
Q  1 atagtcatcatttggataagcaacttatttaccgcatatgacacacacacttatgtataagctatttctataacaaaaaataaataaagttaaattgttt 100  Q
    ||||||||||||||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54392999 atagtcatcatttggataaacaacttatttaccgcttatagcacacacacttatgtataagctatttctataataaaaaataaataaagttaaattgttt 54392900  T
Q  101 ttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaactgctattatgagtattgcgaatgcaagggattgatc 200  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54392899 ttgtatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaactgctattatgagtattgcgaatgcaagggattgatc 54392800  T
Q  201 gagctatttctaggtttgtgttgttgaaaacccaactgtttcaaatcagttcacaatatattcagcattacacttcttttccattgacctttgagcacat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54392799 gagctatttctaggtttgtgttgttgaaaacccaactgtttcaaatcagttcacaatatattcagcattacacttcttttccattgacctttgagcacat 54392700  T
Q  301 attacttataacatgacacaattgcataggcttannnnnnnnncaccctctttcccctgtaggtaatagtatccgcagaggcagatcctcct 392  Q
    ||||||||||||||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54392699 attacttataacatgacacaattgcataggcttatttttttttcaccctctttgccctgtaggtaatagtatccgcagaggcagatcctcct 54392608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 55414545 - 55414438
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    |||||||||||||||   |||| ||||| ||||||||| || |||||||||||||||| |  |||||| ||||| |||||||||||| || |||||||||    
T  55414545 ataagctatttctattggaaaagataaaataaagttaatttttttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataa 55414446  T
Q  156 gttgaaaa 163  Q
    ||||||||    
T  55414445 gttgaaaa 55414438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 3155543 - 3155656
Alignment:
Q  52 tatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| | | ||||  ||||||||| ||||  ||||||| |||| |  ||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaa 3155642  T
Q  151 aataagttgaaaac 164  Q
    |||||| |||||||    
T  3155643 aataagctgaaaac 3155656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 17884009 - 17884121
Alignment:
Q  53 atgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaa 151  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||| | ||| || |||||| ||||| ||| |||||||  || |||||    
T  17884009 atgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaa 17884108  T
Q  152 ataagttgaaaac 164  Q
    || || |||||||    
T  17884109 attagctgaaaac 17884121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 40174501 - 40174616
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    ||||||||||||||||||||  ||| |||||||||||| ||||||||||||||||   | | ||||| ||||||||| ||||| ||  |||||||| ||     
T  40174501 cacttatgtataagctattt--atagcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcataagctacattggagaacttg 40174598  T
Q  147 tgaaaataagttgaaaac 164  Q
    ||| ||||||||||||||    
T  40174599 tgataataagttgaaaac 40174616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 50681188 - 50681107
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||| ||||||||||||||| ||||||||| || |||||  ||||| ||| ||||||||||| ||||||||| |||||||    
T  50681188 aaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaa 50681107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 47 - 155
Target Start/End: Original strand, 56480283 - 56480392
Alignment:
Q  47 acacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaatt 145  Q
    ||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||| || ||| | ||| ||||||||| ||||  |||||||||||  ||    
T  56480283 acacttacgtataagctatttccataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagctt 56480382  T
Q  146 ttgaaaataa 155  Q
     |||||||||    
T  56480383 atgaaaataa 56480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 51630058 - 51630164
Alignment:
Q  59 aagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 157  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||||   ||| ||||| |||| |||| ||||| ||||||| |||| || ||||||||||     
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagc 51630157  T
Q  158 tgaaaac 164  Q
    |||||||    
T  51630158 tgaaaac 51630164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 6364085 - 6364202
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||||| | ||  |||| ||||| |||  |||| ||||| |||  ||||||| ||     
T  6364085 cacttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaactta 6364184  T
Q  147 tgaaaataagttgaaaac 164  Q
     ||||||||| |||||||    
T  6364185 cgaaaataagctgaaaac 6364202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 25885794 - 25885885
Alignment:
Q  47 acacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttg 137  Q
    |||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||| |  || ||||| || |||||| ||||| |||||||    
T  25885794 acacttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagttatcttg 25885885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 164
Target Start/End: Complemental strand, 28300415 - 28300316
Alignment:
Q  66 ttctataa-caaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||| |||| || |||||||||||||||||||||| ||| ||||| | || |||| ||| | ||||||| |||  || ||||||||||||||||||    
T  28300415 ttctataatcaaagaaaaaataaagttaaattgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaac 28300316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 35571725 - 35571650
Alignment:
Q  87 aagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 162  Q
    |||||| |||||||| | ||| ||||| ||||||||| ||||| |||||| ||||| || ||||||||||||||||    
T  35571725 aagttatattgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaa 35571650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 17822964 - 17822890
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||| ||||||||||||| ||  ||||||||| || |||||| ||||| |||||||||||| || ||||||||||    
T  17822964 aaattaagttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataag 17822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 25487677 - 25487643
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||||||||||    
T  25487677 cttatgtataagctatttctataacaaaaaataaa 25487643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 26520363 - 26520309
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||||| || |||||||||||||| || ||||||||||||||||||||    
T  26520363 cacttatgtataaactgtttctataacaaaagatgaaataaagttaaattgtttt 26520309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 50662863 - 50662756
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    ||||||||||||||||| |||| || || ||||| ||| ||||||||||      ||||||||| || |||||  ||||| ||| ||||||||||| |||    
T  50662863 ttatgtataagctatttttatagcataagataaaataatgttaaattgt------atatgctataagttgtttatataagctatattggagaaattgtga 50662770  T
Q  150 aaataagttgaaaa 163  Q
    ||||||||||||||    
T  50662769 aaataagttgaaaa 50662756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 53137977 - 53138090
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    |||||||||||| ||||||||||| |||||| |||| |||||| ||||||| || ||||  ||| |||| ||||  |||| |||| |||| || ||  ||    
T  53137977 cttatgtataagttatttctataa-aaaaaaaaaatgaagttacattgtttctgtatatattataagctcttttggtaagctatcctggaaaacttagga 53138075  T
Q  150 aaataagttgaaaac 164  Q
    |||||||||||||||    
T  53138076 aaataagttgaaaac 53138090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 9760411 - 9760484
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||||||| |||||  ||||||||| || |||||| ||||| ||| |||||||| || |||||||||    
T  9760411 aaataaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 27043962 - 27043869
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||||| || || |||||||||  ||||| ||||||||||||||||| | ||| ||||| || |||||| ||||  ||||||||||||    
T  27043962 cttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaa 27043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 7601697 - 7601757
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatg 109  Q
    ||||||||||||||||| ||||| ||||  ||||| ||||||||||||||||||| |||||    
T  7601697 cttatgtataagctattcctatagcaaaggataaaataaagttaaattgtttttgtatatg 7601757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 21523529 - 21523577
Alignment:
Q  81 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||||    
T  21523529 taaataaagataaattgtttttgaatatactataagctgttttaataag 21523577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 30338724 - 30338672
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaata-aataaagttaaattgtttt 101  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||    
T  30338724 cttatgtataaactatttctataacaaaagatagaataaagttaaactgtttt 30338672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 54069538 - 54069434
Alignment:
Q  61 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttg 159  Q
    ||||||| |||| ||||| ||||| ||| ||||||||||||||| ||||||||| |  |||||| ||||| ||| ||| ||||  | ||||||||||||     
T  54069538 gctatttttatatcaaaagataaaataatgttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagtta 54069439  T
Q  160 aaaac 164  Q
    |||||    
T  54069438 aaaac 54069434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 437340 - 437269
Alignment:
Q  85 taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||||| ||||||||| || ||| ||||||||| ||||  ||| |||||||| || ||||||||||    
T  437340 taaagttaaattatttttgcatgtgttatgagctgtttttataaactatattggagaatttatgaaaataag 437269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 81
Target Start/End: Complemental strand, 2980603 - 2980572
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat 81  Q
    ||||||||||||||||||||||||||||||||    
T  2980603 cttatgtataagctatttctataacaaaaaat 2980572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 2987125 - 2987192
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctatt 114  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||  ||||| || ||| ||||||    
T  2987125 cacttatttataagctatttctacaacaaaaaataaaataaagttaagatgtttatgtataagctatt 2987192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 3070098 - 3070015
Alignment:
Q  57 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttgga 139  Q
    ||||| ||||| ||||||||| ||| |||||||||||| ||||||| | | ||||||  ||||||||| ||||| |||||||||    
T  3070098 ataagttatttttataacaaataatcaaataaagttaacttgttttggtacatgctacaagctgttttcataagttatcttgga 3070015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 52746973 - 52746884
Alignment:
Q  47 acacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttg 137  Q
    ||||||||||| || ||||||| ||||||||| ||||| |||||||||||||||||||  || || || ||||||||| ||||| |||||||    
T  52746973 acacttatgta-aatctatttc-ataacaaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataagctatcttg 52746884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 55064809 - 55064887
Alignment:
Q  87 aagttaaattgtttttgcatatgctattagctgttttaataa--gatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||||||||||||||  ||||||||  |||||||| ||||  | |||||||||||| || |||||||||| ||||||    
T  55064809 aagttaaattgtttttgtgtatgctatatgctgttttcataaatgttatcttggagaacttatgaaaataagatgaaaa 55064887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 2996511 - 2996625
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||| |||||||| ||| |||||| || ||||| || ||| |||||||||||  ||| | ||| || |||||| ||||| |||||||||||   | ||    
T  2996511 cttatgaataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatg 2996610  T
Q  149 aaaataagttgaaaa 163  Q
    |||||||||||||||    
T  2996611 aaaataagttgaaaa 2996625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 4191677 - 4191711
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  4191677 cttatgtataagctatttctataacaaaagataaa 4191711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 23503497 - 23503551
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||    
T  23503497 cttatgtataatctaattctataacaaaatataaaataaagttaaattatttttg 23503551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 29388560 - 29388666
Alignment:
Q  58 taagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||| ||| |||||||||| |||| |||| ||||||||||||||| | |||  || ||  ||||| ||||| |||  ||||||| || ||||||||||    
T  29388560 taagctctttttataacaaaagataagataacgttaaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataag 29388659  T
Q  157 ttgaaaa 163  Q
    |||||||    
T  29388660 ttgaaaa 29388666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 47970256 - 47970290
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  47970256 cttatgtataagctatttctataacaaaagataaa 47970290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 54986361 - 54986407
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaataaagttaaattg 97  Q
    |||||||||||||||||||||||||||||  | ||||||| ||||||    
T  54986361 ttatgtataagctatttctataacaaaaataagataaagtcaaattg 54986407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 679192 - 679281
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaatt-gtttttgcatatgctattagctgttttaataagatatcttg 137  Q
    ||||||||||| ||||| | ||||| ||| || ||||||||||||||| | ||||| ||| ||||| ||||||||| ||||| |||||||    
T  679192 cttatgtataatctattaccataactaaagatgaaataaagttaaattggcttttgtataagctataagctgttttcataagttatcttg 679281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 30024637 - 30024690
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||| ||||| |||||||||||||||| || ||||||||| ||||||||||    
T  30024637 acttatgcataagttatttctataacaaaagataaaataaagtaaaattgtttt 30024690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 34213765 - 34213692
Alignment:
Q  11 tttggataagcaacttatttaccgcatatgacacacacacttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||| | || ||| ||||| |  | | ||||||||||||||||||| ||||| |||||    
T  34213765 tttggataagcaacttatttgcagcttataacacaaatgcgtgtgtataagctatttctatagcaaaagataaa 34213692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 51044590 - 51044557
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  51044590 ttatgtataagctatttctataacaaaagataaa 51044557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 52645880 - 52645847
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  52645880 ttatgtataagctatttctataacaaaagataaa 52645847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 53294213 - 53294132
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||| |||||||||||||| ||||||||| || |||||| ||||  ||| || ||||| || |||||| ||| ||||||    
T  53294213 aaataaatttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaa 53294132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 2733256 - 2733344
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgt-ttttgcatatgctattagctgttttaataagatatc 134  Q
    ||||||||||||||| |||| ||| | |||| || ||||||||||||| | | ||||||||| | |||||| |||||| ||||||||||    
T  2733256 cacttatgtataagcaatttttatgaaaaaagataaaataaagttaaactatattttgcataagttattagttgttttcataagatatc 2733344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 7731712 - 7731760
Alignment:
Q  54 tgtataagctatttctataacaaaa-aataaataaagttaaattgtttt 101  Q
    |||||||||||||||||||| |||| | |||||||||||||| ||||||    
T  7731712 tgtataagctatttctataataaaagactaaataaagttaaactgtttt 7731760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 21683610 - 21683566
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataa-ataaagttaaa 94  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||    
T  21683610 ttatgtataaactatttctataacaaaagataagataaagttaaa 21683566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 21731742 - 21731674
Alignment:
Q  95 ttgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||| || |||||| || |||||| ||||| ||| |||||||| || ||||| |||||||||||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaa 21731674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 24160928 - 24160980
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||||||||  || |||| |||||||||| ||||    
T  24160928 cttatgtataagctatttctataacaaaggataaaatcaagttaaattatttt 24160980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 29912897 - 29913000
Alignment:
Q  60 agctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 158  Q
    ||||||||||||| |||||||| ||||||||| |||||| ||||| ||||| ||  ||  ||||| ||||| ||||||||| || || | |||||||| |    
T  29912897 agctatttctatagcaaaaaataaaataaagtaaaattg-ttttgtatatgttaaaagtcgttttcataagctatcttggacaacttataaaaataagct 29912995  T
Q  159 gaaaa 163  Q
    |||||    
T  29912996 gaaaa 29913000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 34368820 - 34368868
Alignment:
Q  55 gtataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    |||||||||||||||||||||||| || ||| ||||| |||||||||||    
T  34368820 gtataagctatttctataacaaaagataaaacaaagtcaaattgttttt 34368868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 41336706 - 41336758
Alignment:
Q  57 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatg 109  Q
    ||||||||||| |||| |||| |  |||||||||||||||||||||| |||||    
T  41336706 ataagctatttttatagcaaagataaaataaagttaaattgtttttgtatatg 41336758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 53155203 - 53155242
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagt 90  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  53155203 cttatgtataagctattt-tataacaaaagataaataaagt 53155242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 24915176 - 24915069
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    |||| ||||||||||| || || ||||| ||||||||||||||||||| ||||||||| ||||||||| ||||| | |||||||||| || |||||||||    
T  24915176 ataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataa 24915077  T
Q  156 gttgaaaa 163  Q
    ||||||||    
T  24915076 gttgaaaa 24915069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 4445644 - 4445761
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaata-aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||| || |  | || |||| ||||| |  ||||||||  ||     
T  4445644 cacttatgtataggctatttctataacaaaaaatacaataaagttaaattttttttgcataagccacaatctattttcataagctgacttggagagcttg 4445743  T
Q  147 tgaaaataagttgaaaac 164  Q
    ||||||||||||||||||    
T  4445744 tgaaaataagttgaaaac 4445761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 7472251 - 7472364
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    |||| ||||||||||||||||||||||| ||| |  ||||||||||||||||| |||  |||| ||||||||  ||||| |||||||||||  || ||||    
T  7472251 ttatttataagctatttctataacaaaagatataataagttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaa 7472350  T
Q  151 aataagttgaaaac 164  Q
    |||||| |||||||    
T  7472351 aataagctgaaaac 7472364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 37842485 - 37842368
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    ||||||||||||||||||||| ||||| || ||||||||||||| ||| || | ||| ||||| || |||||| ||||| ||||||| |||| || | ||    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaa 37842386  T
Q  151 aataagttgaaaactgct 168  Q
    |||||| |||||||||||    
T  37842385 aataagctgaaaactgct 37842368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 17603483 - 17603406
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttg 159  Q
    |||||| ||||||||||||||| ||||||||| || |||||| ||||| ||| |||||||| || |||||||||||||    
T  17603483 aaataacgttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttg 17603406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 27820464 - 27820355
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaat 153  Q
    |||||||||||||| ||||  ||| |  |||||||| |||||||||| || ||| |||||  |||||||| ||||| |||||||||||| || |||||||    
T  27820464 tgtataagctatttttatagtaaatataaaataaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaat 27820365  T
Q  154 aagttgaaaa 163  Q
    ||| ||||||    
T  27820364 aagctgaaaa 27820355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 47432041 - 47432147
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||| ||||  |||| ||||| ||||||||||||||||||| ||||||||| || |||||| ||||| ||| ||| |||| || |||||||||    
T  47432041 ataagctatttttatagaaaaagataaaataaagttaaattgtttttgaatatgctataaggtgtttt-ataagttatattgaagaatttatgaaaataa 47432139  T
Q  156 gttgaaaa 163  Q
    | ||||||    
T  47432140 gctgaaaa 47432147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 49888705 - 49888812
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||||||||||||||||| |   |||| || |||||||||| ||||||||| | ||| |||||||| |||||| ||||| |||||| ||||| || ||    
T  49888705 cttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatg 49888804  T
Q  149 aaaataag 156  Q
    ||||||||    
T  49888805 aaaataag 49888812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 3234107 - 3234033
Alignment:
Q  89 gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||||||||| ||||||||| || |||||| ||||| ||| |||||||| || ||||||||||| |||||    
T  3234107 gttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaa 3234033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 473135 - 473216
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||||||||||||||||| |  |||||||| || |||||| ||||| | | |||||||| || |||||||||||||||||    
T  473135 aaataaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaa 473216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 38578469 - 38578538
Alignment:
Q  54 tgtataagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttt 122  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| |||||| ||| ||||| || |||||    
T  38578469 tgtataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttgttt 38578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 1510432 - 1510328
Alignment:
Q  59 aagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 158  Q
    ||||||||| || ||||||| |||||||| ||| ||||||||||| ||| | ||| || |||||| ||||| | | |||||||| ||  |||||||||||    
T  1510432 aagctatttttaaaacaaaagataaataatgttcaattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagtt 1510333  T
Q  159 gaaaa 163  Q
    |||||    
T  1510332 gaaaa 1510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 84 - 164
Target Start/End: Original strand, 2294884 - 2294964
Alignment:
Q  84 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||||||||||||||| ||| ||||| |||| |||| ||||  |||||||||||| ||  ||||||||| |||||||    
T  2294884 ataaagttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaac 2294964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 34619510 - 34619446
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctat 113  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||||||||||||| ||| |||||    
T  34619510 cttatgtataagccatttctataacaaaagataaaataaggttaaattgtttttgtataagctat 34619446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 2777874 - 2777945
Alignment:
Q  93 aattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||| |||| ||| ||||| ||||||||||||||| || ||||||||| || |||||||||| |||||||    
T  2777874 aattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaac 2777945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 29793720 - 29793835
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||||| |||||||||||| ||||||| |||| |||||||||| ||||||| | ||| ||||| || ||  || ||||| |||||| ||||  || ||    
T  29793720 cttatgtacaagctatttctacaacaaaagataacataaagttaagttgttttcgtataagctataagttgagttcataagctatcttcgagagcttatg 29793819  T
Q  149 aaaataagttgaaaac 164  Q
    ||| ||||||||||||    
T  29793820 aaactaagttgaaaac 29793835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 17778929 - 17779010
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    ||||||||| ||||| |||| | ||||||||| ||| ||||| ||||| |||||||||||| ||||| ||||||| |||||||    
T  17778929 aaataaagtcaaatt-ttttagtatatgctataagcagttttcataagctatcttggagaatttttggaaataaggtgaaaac 17779010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 34290207 - 34290289
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||||||| ||  ||||| ||| ||||| ||||||||| ||||| ||||||| |||| || |||||||||| |||||||    
T  34290207 aaataaagttaattttattttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaac 34290289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 4549804 - 4549853
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgt 98  Q
    |||||||| |||||||||||||||||||| || |||||||||||||||||    
T  4549804 cttatgtacaagctatttctataacaaaagataaaataaagttaaattgt 4549853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 30191937 - 30192010
Alignment:
Q  58 taagctatttctataacaaaaaataaa-taaagttaaattgtttt-tgcatatgctattagctgttttaataag 129  Q
    |||||||||| |||| ||||||||||| ||||||||| || |||| |||||||||||| ||||||||| |||||    
T  30191937 taagctatttttatagcaaaaaataaaataaagttaatttattttgtgcatatgctataagctgtttttataag 30192010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 34952155 - 34952272
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    ||||||||||||||||||| | || ||  | |||||||||||||||||||| | ||| ||| | || |||||| ||||| ||||   ||||| || ||||    
T  34952155 tatgtataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaa 34952254  T
Q  151 aataagttgaaaactgct 168  Q
    |||||| |||||||||||    
T  34952255 aataagctgaaaactgct 34952272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 37631658 - 37631577
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||| ||| |||||||||||||  |||| |||||||||||||  |||| ||| |||||||| || |||||||||| ||||||    
T  37631658 aaatgaagctaaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 41195288 - 41195211
Alignment:
Q  86 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||| |||||||| |||| |||| | ||||||| ||||  |||||||||||| || |||||||||| ||||||    
T  41195288 aaagttaaactgtttttgtatatactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 41195211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 42174806 - 42174908
Alignment:
Q  61 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttg 159  Q
    ||||||| |||| ||||| ||||| ||| ||||||  ||||||| ||||||||| || |||||| ||||| ||| |||||||| || ||||||||||||     
T  42174806 gctatttttatatcaaaagataaagtaatgttaaa--gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagtta 42174903  T
Q  160 aaaac 164  Q
    |||||    
T  42174904 aaaac 42174908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 50319229 - 50319282
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||||||| || ||||||||| || |||||||    
T  50319229 acttatgtataagctatttctataacaaaagataaaataaagtcaagttgtttt 50319282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 172709 - 172665
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataa-ataaagttaa 93  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||    
T  172709 cttatgtataagctatttctataacaaaagataacataaagttaa 172665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 6265038 - 6265122
Alignment:
Q  56 tataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttgga 139  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||| |||   |||| ||| ||||| ||||| |||| ||||    
T  6265038 tataagctacttctataacaaaaaataaaataaagtcaaattgtttttacattaactataagccgttttcataagttatcatgga 6265122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 15687205 - 15687153
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||| ||| |||||||||||||||||||| || ||||||||||||||||||||    
T  15687205 cttaagtacaagctatttctataacaaaatataaaataaagttaaattgtttt 15687153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 27976570 - 27976626
Alignment:
Q  86 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||||||||||| ||||||||| || |||||| ||||| |||||| |||||    
T  27976570 aaagttaaattgtttttgtatatgctataagttgttttcataagctatcttcgagaa 27976626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 48748714 - 48748663
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  48748714 cttatgtataagctatttctata-caaaagatgaaataaagttaaattgtttt 48748663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 2462905 - 2462948
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataa-ataaagtta 92  Q
    ||||||||||||||||||||||||||||| |||| |||||||||    
T  2462905 cttatgtataagctatttctataacaaaatataagataaagtta 2462948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 4256173 - 4256122
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaata-aataaagttaaattgtttt 101  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||||| ||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaattatttt 4256122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 7137133 - 7137016
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattg---tttttgcatatgctattagctgttttaataagatatcttggagaaatt 145  Q
    ||||| ||||| |||||| ||||||||||  |||| |||||||| |||    |||||| |||  |||| ||||||||| ||||| |||||||||||| ||    
T  7137133 cttatatataaactatttttataacaaaagttaaaataaagttagattactatttttgtataatctataagctgttttcataagctatcttggagaactt 7137034  T
Q  146 ttgaaaataagttgaaaa 163  Q
     |||||||||| ||||||    
T  7137033 atgaaaataagctgaaaa 7137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 164
Target Start/End: Complemental strand, 7244794 - 7244675
Alignment:
Q  45 acacacttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaat 144  Q
    |||||||||||||||||||||||||| | | ||| |||||  ||| | ||||||||| | ||| |||||  | |||||| |||||  |||||||||||      
T  7244794 acacacttatgtataagctatttctacaccgaaagataaaataaggttaattgttttcgtataagctatacgttgttttcataagcgatcttggagaacg 7244695  T
Q  145 tttgaaaataagttgaaaac 164  Q
    | |||||||| ||| |||||    
T  7244694 tatgaaaataggttaaaaac 7244675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 9572237 - 9572166
Alignment:
Q  53 atgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    |||||| ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||| ||||| ||| |||||    
T  9572237 atgtattagctatttctatagcaaaagataaaataaagttaaattgcttttgtataagctataagccgtttt 9572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 36151636 - 36151585
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||| ||||||||| || ||||||||| ||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgtttt 36151585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 37517319 - 37517220
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||| |||||||||| ||||| ||||| ||||||||||||||||||| ||||  ||| || | |||||||||| ||| || ||||| |  |||||||||    
T  37517319 ataagttatttctataccaaaatataaaataaagttaaattgtttttgtatatattataagttattttaataagctatattagagaactcctgaaaataa 37517220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 38883035 - 38882929
Alignment:
Q  57 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||||||||| ||||| |||||||| | |||||||| |||| |||   ||| || |||||| ||||| | || | ||||| || ||||||||||    
T  38883035 ataagctatttctatagcaaaagataaataacgctaaattgtctttgtataaaatataagttgttttcataagctctc-tagagaacttatgaaaataag 38882937  T
Q  157 ttgaaaac 164  Q
    ||||||||    
T  38882936 ttgaaaac 38882929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 46423329 - 46423395
Alignment:
Q  62 ctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    |||| |||||| ||||||||||| | |||||||||||||| ||||| ||||| ||||||||| |||||    
T  46423329 ctatatctatagcaaaaaataaa-atagttaaattgttttggcataagctataagctgttttcataag 46423395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 7028230 - 7028284
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||||||| ||||||||||| ||||| || |||||||||||| |||||||||    
T  7028230 cttatgtataaactatttctatagcaaaagataaaataaagttaagttgtttttg 7028284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 7218173 - 7218091
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    ||||||||| ||||||||||   ||| ||||| || |||||| ||||  |||| ||||||| || ||||||||||||||||||    
T  7218173 aaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaac 7218091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 9656601 - 9656695
Alignment:
Q  63 tatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||| ||||||||||| |||||||||||| ||||   ||| ||||| |||||| || ||||| |||| ||||  |||| ||||||||||    
T  9656601 tatttctatagcaaaaaataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataag 9656695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 13037802 - 13037836
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  13037802 cttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 101
Target Start/End: Complemental strand, 28389199 - 28389153
Alignment:
Q  55 gtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    |||||||||||||  ||||||||| ||||||||||| ||||||||||    
T  28389199 gtataagctattttgataacaaaagataaataaagtcaaattgtttt 28389153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 45975677 - 45975743
Alignment:
Q  98 tttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||| ||| ||||  ||||||||| ||||| |||||||||||| || |||||||||| |||||||    
T  45975677 tttttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaac 45975743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 1432455 - 1432560
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    |||||||||||||||||||||  |||| || ||||| |||| ||||||||||  ||| ||||| |  |||||| ||||  |||||||||||| || ||||    
T  1432455 tatgtataagctatttctatagtaaaagataaaatagagttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaa 1432554  T
Q  151 aataag 156  Q
    | ||||    
T  1432555 agtaag 1432560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 3070034 - 3069973
Alignment:
Q  82 aaataaagttaaattgttttt-gcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||| |||||||||||||||| | ||||||||| |||||||||  |||| ||||||||||||    
T  3070034 aaatgaagttaaattgtttttcgtatatgctataagctgttttcgtaagctatcttggagaa 3069973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 4700200 - 4700155
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagtta 92  Q
    |||||||||| |||||||||||||||||||| || |||||||||||    
T  4700200 cacttatgtacaagctatttctataacaaaagataaaataaagtta 4700155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 6976886 - 6976931
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataa-ataaagttaaa 94  Q
    |||||||||||| |||||||||||||||| |||| |||||||||||    
T  6976886 cttatgtataagatatttctataacaaaagataagataaagttaaa 6976931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 13809943 - 13810000
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctat 113  Q
    ||||| ||||||| || ||||| ||||| ||||||||||||||||||| |||||||||    
T  13809943 ataagttatttctttagcaaaagataaaataaagttaaattgtttttgtatatgctat 13810000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 14576752 - 14576672
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||||||||||||||||||| ||||||||| |  | |||| ||||| ||| || ||| || |||||||||||| ||||||    
T  14576752 aaataaagttaaattgtttttgtatatgctataatttttttttataagctatattagag-aactttgaaaataagctgaaaa 14576672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 15437902 - 15437935
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||| ||||||||||||||||||||||||||    
T  15437902 ttatgtaaaagctatttctataacaaaaaataaa 15437935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 23895275 - 23895308
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  23895275 ttatgtataagctatttctataacaaaagataaa 23895308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 26293231 - 26293186
Alignment:
Q  57 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||    
T  26293231 ataagctatttctataacaaaaagtaaaataaagtcaaattgtttt 26293186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 26630413 - 26630494
Alignment:
Q  62 ctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||||||||||||| ||||||||| ||||||||||   ||| ||||| | ||||||| ||| | |||| |||||||    
T  26630413 ctatttctataacaaaaaatgaaataaagtaaaattgttttcatataagctataaactgttttgatacgctatcctggagaa 26630494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 31517862 - 31517757
Alignment:
Q  60 agctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 158  Q
    ||||||||||| ||||||| ||||| ||||||||||||| |||   ||| ||||| |||||| || ||||  | |||||||||  || |||||||||| |    
T  31517862 agctatttctacaacaaaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagct 31517763  T
Q  159 gaaaac 164  Q
    ||||||    
T  31517762 gaaaac 31517757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 37841939 - 37841988
Alignment:
Q  53 atgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||| ||||||||||  || ||||||||||||||||||||    
T  37841939 atgtataagctattcctataacaaatgataaaataaagttaaattgtttt 37841988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 38635719 - 38635650
Alignment:
Q  9 catttggataagcaacttatttac-cgcatatgacacacacacttatgtataagctatttctataacaaa 77  Q
    ||||||||||| ||||||| |||  ||||||| ||| | ||| ||||||||||||||| |||||||||||    
T  38635719 catttggataaacaacttaattaagcgcatataacataaacaattatgtataagctatatctataacaaa 38635650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 142
Target Start/End: Original strand, 41505660 - 41505717
Alignment:
Q  85 taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    ||||||||||||||||| | ||||| ||| ||||||||| ||||| ||| ||||||||    
T  41505660 taaagttaaattgttttcgtatatgttataagctgtttttataagctatattggagaa 41505717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 45145165 - 45145226
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgct 111  Q
    ||||||||||||||||| |||| ||||| || ||||||  |||||||||||||| |||||||    
T  45145165 ttatgtataagctatttttatagcaaaagataaaataatattaaattgtttttgtatatgct 45145226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 46423153 - 46423214
Alignment:
Q  11 tttggataagcaacttatttaccgcatatgacacacacacttatgtataagctatttctata 72  Q
    ||||||||| |||||||||| | || ||| |||||  ||||||||| |||||||||||||||    
T  46423153 tttggataaacaacttatttgcagcttataacacaagcacttatgtctaagctatttctata 46423214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 46499986 - 46499933
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    ||||| |||||||||||||||||| |||| || ||||||||| |||||||||||    
T  46499986 cttatctataagctatttctataagaaaagataaaataaagtcaaattgttttt 46499933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 51695593 - 51695513
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||| |||||||||| | ||| | ||| || |||||| ||||| |||||||||||| || |||||||||| ||||||    
T  51695593 aaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaa 51695513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 1510088 - 1509977
Alignment:
Q  59 aagctatttctataacaaaaaata-aataaagttaaattgtttttgcatatgctattagctgttttaataagatatctt-ggagaaattttgaaaataag 156  Q
    |||||||||| |||||||||||   ||||||||||||||||||||| ||| || || | ||||||| ||||  |||||| |||| | || ||||||||||    
T  1510088 aagctatttcgataacaaaaaacgtaataaagttaaattgtttttg-atacgcgataaactgttttcataacctatcttaggagtatttatgaaaataag 1509990  T
Q  157 ttgaaaactgcta 169  Q
     ||||||| ||||    
T  1509989 ctgaaaacagcta 1509977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 153
Target Start/End: Original strand, 7069236 - 7069343
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat--aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaatt 145  Q
    |||||| |||||||||||| ||||| ||||| ||  ||| ||| || ||||||||| | ||| ||||| ||||| |||  |||| |||||||||||| ||    
T  7069236 cacttaagtataagctattactatagcaaaagataaaaaaaaaattgaattgttttcgtataagctataagctgcttttgtaagctatcttggagaactt 7069335  T
Q  146 ttgaaaat 153  Q
     |||||||    
T  7069336 atgaaaat 7069343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 36070188 - 36070268
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    |||||||||  ||||||| |||||||||| ||||| |||||||||||||| || | ||| ||||| || |||||| |||||    
T  36070188 cttatgtatgggctatttttataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcataag 36070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 38651541 - 38651489
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||  |||||||||    
T  38651541 cttatgtataagctaattctataacaaaagataaactaaagtcgaattgtttt 38651489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 46252816 - 46252756
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcata 107  Q
    |||| ||||||| ||||||| |||||||||| ||||| ||||||||||||  |||||||||    
T  46252816 cactaatgtataggctatttttataacaaaagataaaataaagttaaatttcttttgcata 46252756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 49373817 - 49373769
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgt 98  Q
    |||||||||||| ||||||||||| ||||  |||||||||| |||||||    
T  49373817 cttatgtataagttatttctataagaaaaggtaaataaagtcaaattgt 49373769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 49517012 - 49517060
Alignment:
Q  54 tgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||| |||||||||||||||| || ||||||||| ||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgtttt 49517060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 37353380 - 37353266
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||||||||  |||||||| |||||||||  |||| |||||| ||||  || |||    
T  37353380 cttatgtacaaactatttctataacaaaagataaataaagttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatga 37353281  T
Q  150 aaataagttgaaaac 164  Q
    ||||||  |||||||    
T  37353280 aaataatctgaaaac 37353266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 18930602 - 18930755
Alignment:
Q  12 ttggataagcaacttatttaccgcatatgacacacacacttatgtataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgc 110  Q
    ||||||||||||||||||| | || |||  |||| |  | ||||||||||||| || |||||||||| |||||| |||||||||||||| ||| ||||||    
T  18930602 ttggataagcaacttatttgcagcttatagcacaaatgcgtatgtataagctagttatataacaaaagataaatgaaagttaaattgttattgtatatgc 18930701  T
Q  111 tattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    | | | |||||| |||||| |||||| ||||| || ||| |||||| |||||||    
T  18930702 tgtaaactgtttcaataagctatcttcgagaacttatgagaataagatgaaaac 18930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 26771210 - 26771317
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||||||||  |||  ||||| |||| |||||||||||||| ||||||||| |||| |||| ||||||||| || ||||| || |||||||||    
T  26771210 ataagctatttctatagtaaagcataaaataaacttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataa 26771309  T
Q  156 gttgaaaa 163  Q
    ||||||||    
T  26771310 gttgaaaa 26771317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 10114428 - 10114542
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    ||||||||||||||||||||||| ||||| |||||  ||||| ||||||||| | ||| ||||| ||||||||| || || ||| ||||||||  | |||    
T  10114428 cttatgtataagctatttctatagcaaaagataaaataagttgaattgttttggtataagctataagctgttttcattagctatattggagaacatatga 10114527  T
Q  150 aaataagttgaaaac 164  Q
    ||||||| |||||||    
T  10114528 aaataagctgaaaac 10114542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 27028807 - 27028883
Alignment:
Q  87 aagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||||||||||| || ||||||||| ||||||||| ||||| |||||||||||  || |||||||||| ||||||    
T  27028807 aagttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaa 27028883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 27049304 - 27049419
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaatttt 147  Q
    |||||| ||||||  |||||||||| ||||| |||||||||||| |||| |||| | ||| ||||| | || |||| ||||| ||| ||||||||||| |    
T  27049304 cacttacgtataatttatttctatagcaaaagataaataaagttcaattattttcgtataagctataaacttttttcataagctat-ttggagaaattat 27049402  T
Q  148 gaaaataagttgaaaac 164  Q
    ||||||||| |||||||    
T  27049403 gaaaataagatgaaaac 27049419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 38602304 - 38602378
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||| ||||||||||| ||||||||||||||| ||||||||| ||||| |||  ||||||| || ||||||||||    
T  38602304 aaatgaagttaaattgcttttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataag 38602378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 42597338 - 42597391
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  42597338 acttatgtataagctatttctataacaaaagataaaataaagtaaaattgtttt 42597391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 4558737 - 4558809
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttt 122  Q
    ||||||||||||||||||||||| |||| || ||||||||||||||| ||||   ||||||||| ||||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgttt 4558809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 37444547 - 37444495
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  37444547 cttatgtataagctattactataacaaaagataaagtaaagttaaattgtttt 37444495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 1112791 - 1112865
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    |||||||||| |||||||||||||||||| || |||||| |||||||||||||  |||| ||||| ||| |||||    
T  1112791 cttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataagcggtttt 1112865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 7646145 - 7646198
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||||||||||||||||||| ||||  | ||||||||||||||||||||||    
T  7646145 ttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttg 7646198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 14482140 - 14482193
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    ||||||||||| ||||||||||||||||| || ||||||||| |||||||||||    
T  14482140 cttatgtataaactatttctataacaaaagataaaataaagtcaaattgttttt 14482193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 26215434 - 26215479
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaa 94  Q
    ||||||||||||||||||||||||||||| || |||||||||||||    
T  26215434 cttatgtataagctatttctataacaaaagataaaataaagttaaa 26215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 37220253 - 37220285
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat 81  Q
    |||||||||||||||||||||||||||||||||    
T  37220253 acttatgtataagctatttctataacaaaaaat 37220285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 38036244 - 38036152
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    ||||||||||| |||||| | ||||||||||| ||||||| | ||||||||||||  || ||||| | ||||||| || || |||||||||||    
T  38036244 cttatgtataaactatttatttaacaaaaaataaaataaattcaaattgtttttgtgtaagctataaactgttttgattagctatcttggaga 38036152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 40598984 - 40598932
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    |||||||||||||||||||| ||||||| ||  ||||||||||||||||||||    
T  40598984 ttatgtataagctatttctaaaacaaaagatggaataaagttaaattgttttt 40598932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 7514516 - 7514631
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||||||||||||||||||||| |||||| | |||||| ||| |||||||||   ||| ||||  ||||||||| ||||| ||| ||| |||| |  ||    
T  7514516 cttatgtataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctattttgcagaactagtg 7514615  T
Q  149 aaaataagttgaaaac 164  Q
    ||||| ||||| ||||    
T  7514616 aaaattagttggaaac 7514631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 8536180 - 8536129
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||||||||| | || | |||| ||||||||||    
T  8536180 cttatgtataagctatttctataacaaaataaaagtgaagtcaaattgtttt 8536129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 16733980 - 16734047
Alignment:
Q  63 tatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    |||||||||| ||||| ||||| |||| |||||||||||||| ||||||||| || |||||| |||||    
T  16733980 tatttctatagcaaaagataaactaaacttaaattgtttttgtatatgctataagttgttttgataag 16734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 31915400 - 31915349
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaata-aataaagttaaattgtttt 101  Q
    ||||||||||||||| |||||||||||| ||| |||||||| ||||||||||    
T  31915400 ttatgtataagctatatctataacaaaagatagaataaagtcaaattgtttt 31915349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 13561442 - 13561392
Alignment:
Q  52 tatgtataagctatttctataaca-aaaaataaataaagttaaattgtttt 101  Q
    |||| ||||||||||||||||||| |||| |||||||||| ||||||||||    
T  13561442 tatgaataagctatttctataacagaaaattaaataaagtcaaattgtttt 13561392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 32976358 - 32976408
Alignment:
Q  53 atgtataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    ||||||| |||||||||||||||||| || |||||||||||||| ||||||    
T  32976358 atgtatacgctatttctataacaaaagataaaataaagttaaatagttttt 32976408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 37153022 - 37152968
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttg 103  Q
    |||||||||||  |||||||||||||||  ||||| |||||||||||||||||||    
T  37153022 cttatgtataatatatttctataacaaagtataaaataaagttaaattgtttttg 37152968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 42043466 - 42043384
Alignment:
Q  61 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||||| ||||| ||||| |  |||||||||||||||| ||||| ||| || |||||| ||||| |||||| |||||    
T  42043466 gctatttctatagcaaaagataaaatgcagttaaattgtttttggatatgatataagttgttttcataagctatcttagagaa 42043384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 3936785 - 3936894
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    ||||||||||||| ||||||||||||||||  || |||||||| |||||||| ||   ||| ||||| |||||||||  |||| || |||| || | ||     
T  3936785 cacttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagctataagctgttttcgtaagctaacttgaagcactta 3936884  T
Q  147 tgaaaataag 156  Q
    ||||||||||    
T  3936885 tgaaaataag 3936894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 7918903 - 7918790
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    ||||||||| ||||||||||| | |||||| ||||||||||||||| ||||    || ||||| || |||||| ||||| ||||||| |||  || || |    
T  7918903 tatgtataacctatttctatatcgaaaaataaaataaagttaaatttttttcttgtaagctataagttgttttcataagctatcttgtagagcttgtgga 7918804  T
Q  151 aataagttgaaaac 164  Q
    |||||| |||||||    
T  7918803 aataagctgaaaac 7918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 11569523 - 11569474
Alignment:
Q  115 agctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    ||||||||| ||||| |||| |||||| |||||||||||||| |||||||    
T  11569523 agctgttttcataagctatcatggagagattttgaaaataagctgaaaac 11569474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 18133627 - 18133708
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||| ||||||||||| ||||| |||| |||| ||||| ||| ||||  ||| |||||||| || |||||||||| ||||||    
T  18133627 aaatgaagttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaa 18133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 44617918 - 44617885
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||| |||||||||    
T  44617918 ttatgtataagctatttctataactaaaaataaa 44617885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 10758376 - 10758324
Alignment:
Q  62 ctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctat 113  Q
    ||||||||||| ||||  ||||| ||||||||||||||||||| |||||||||    
T  10758376 ctatttctatagcaaatcataaaataaagttaaattgtttttgtatatgctat 10758324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 12497356 - 12497292
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgt 120  Q
    |||||| |||| |||| ||||| ||||| ||||||||| ||||||||| ||||||||| ||||||    
T  12497356 ataagccatttttatagcaaaagataaaataaagttaacttgtttttgtatatgctataagctgt 12497292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 16163412 - 16163376
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  16163412 cacttatgtataagctatttctataactaaagataaa 16163376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 30628030 - 30627942
Alignment:
Q  54 tgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    |||||||||||||||| |||||||| || ||||||| | ||||||||| ||  || ||||| || |||||| ||||| |||||| ||||    
T  30628030 tgtataagctatttctgtaacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcataagttatcttagaga 30627942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 36189506 - 36189610
Alignment:
Q  52 tatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    |||||||||||||||||| | |||||| ||||| ||||||||||||||||||| ||||| ||| |||| |||| ||||||||| |||||||| || ||||    
T  36189506 tatgtataagctatttctcttacaaaagataaaataaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatgaa 36189605  T
Q  151 aataa 155  Q
    |||||    
T  36189606 aataa 36189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 35127503 - 35127411
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    |||||||||| |||||||||||||||||| ||| | ||||||||||||||||||||||||||||| | || |||| |||   |||||||||||    
T  35127503 cttatgtataggctatttctataacaaaagatatactaaagttaaattgtttttgcatatgctataaactattttcatacactatcttggaga 35127411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 402673 - 402559
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    |||||||||||||||||||||||  |||| |||| |||| |||||||||||| | ||| | ||| ||||||||| ||||  ||||||| |||| || |||    
T  402673 cttatgtataagctatttctatagaaaaagataattaaatttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtga 402574  T
Q  150 aaataagttgaaaac 164  Q
    || |||| |||||||    
T  402573 aattaagctgaaaac 402559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 30956751 - 30956665
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| ||||| || |||||| | ||| ||||||||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaa 30956665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 30972563 - 30972477
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| ||||| || |||||| | ||| ||||||||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaa 30972477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 44061157 - 44061048
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    ||||| ||||||||||||||||||| ||||| ||||| ||| ||||||||||||||  ||| ||||| || |||||| ||| |||||||| ||||| ||     
T  44061157 cacttctgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaactta 44061058  T
Q  147 tgaaaataag 156  Q
    ||||| ||||    
T  44061057 tgaaattaag 44061048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 39980701 - 39980781
Alignment:
Q  83 aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||| ||||||||||||||| | ||||||| || |||||| ||||| ||| |||||||| || |||||||||||||||||    
T  39980701 aataacgttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaa 39980781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 2128382 - 2128331
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 20880422 - 20880521
Alignment:
Q  57 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    ||||||||||| |||| ||||  |||||  ||||||||||||||||| ||||||||| | ||||||| | ||| ||| |||||||| || ||||||||||    
T  20880422 ataagctatttttatagcaaatgataaaacaagttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataag 20880521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 36783466 - 36783351
Alignment:
Q  51 ttatgtataa-gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||||||| |||||||||||| ||||| ||||| |||||| ||||||||||   |||  |||||||||||||| ||||| ||| |||||| |||| ||    
T  36783466 ttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggagcaattatg 36783367  T
Q  149 aaaataagttgaaaac 164  Q
    || ||||| |||||||    
T  36783366 aatataagctgaaaac 36783351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 39602341 - 39602227
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||| ||||||||||||||||  |||| |||| ||||||||||||||||   | ||| | ||| ||||||||| ||||| |||||| ||||| || ||    
T  39602341 cttatgcataagctatttctatagaaaaagataacataaagttaaattgttgc-gtataagttataagctgttttcataagctatctttgagaacttatg 39602243  T
Q  149 aaaataagttgaaaac 164  Q
    ||||||||||||||||    
T  39602242 aaaataagttgaaaac 39602227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 155
Target Start/End: Complemental strand, 46886808 - 46886718
Alignment:
Q  64 atttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||| ||||| ||||| | ||||||||| |||||| ||  ||||| ||||||||| ||||| |||||||||||| ||||||||||||    
T  46886808 atttctatatcaaaagataaa-atagttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataa 46886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 30443864 - 30443945
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||| ||||||||||| ||||| ||||||||| ||||||||| ||||  ||| |||||||| || |||||||||| ||||||    
T  30443864 aaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 47132310 - 47132383
Alignment:
Q  90 ttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||||||||||| |||||||||  | |||||| ||||| ||| |||||||| || |||||||||||||||||    
T  47132310 ttaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaa 47132383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 21367611 - 21367720
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    ||||||||||| ||| |||||| |||||||||||    ||||||||||||| | |||   ||| || |||||| ||||| |||||||||||| || ||||    
T  21367611 ttatgtataagatatctctatagcaaaaaataaa----gttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaa 21367706  T
Q  151 aataagttgaaaac 164  Q
    |||||| |||||||    
T  21367707 aataagctgaaaac 21367720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 35959581 - 35959474
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||||||||  |||  ||||| |||||||||||| |||||| ||||||| | || |||||  ||||| ||| || ||||| ||||||||||||    
T  35959581 ataagctatttctatagaaaaggataaaataaagttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataa 35959482  T
Q  156 gttgaaaa 163  Q
    | ||||||    
T  35959481 gctgaaaa 35959474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 36631175 - 36631076
Alignment:
Q  58 taagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||||||||  |||  ||||| ||||||||||||||||||| | ||||||| || |||||| || || ||| |||||||| || ||||||||||    
T  36631175 taagctatttctatagtaaaggataaagtaaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataag 36631076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 15304472 - 15304427
Alignment:
Q  57 ataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||| || ||||||||||||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgtttt 15304427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 20170494 - 20170575
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||| ||||||||||||||| ||||||||| || |||||| | ||| ||| || ||||| |  |||||||||||||||||    
T  20170494 aaataatgttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagttgaaaa 20170575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 27896308 - 27896263
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaataaagttaaatt 96  Q
    |||||||||||||||||| || |||||| |||||||||||||||||    
T  27896308 ttatgtataagctatttccatgacaaaagataaataaagttaaatt 27896263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 42809242 - 42809291
Alignment:
Q  53 atgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgtttt 42809291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 52618946 - 52619055
Alignment:
Q  55 gtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaat 153  Q
    |||||||||||||||| ||||||  || ||||||||||||||||||||   ||| | ||| ||||||||| | ||| ||||||| |||  || |||||||    
T  52618946 gtataagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaat 52619045  T
Q  154 aagttgaaaa 163  Q
    ||| ||||||    
T  52619046 aaggtgaaaa 52619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 20669559 - 20669591
Alignment:
Q  47 acacttatgtataagctatttctataacaaaaa 79  Q
    |||||||||||||||||||||||||||||||||    
T  20669559 acacttatgtataagctatttctataacaaaaa 20669591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 49034355 - 49034291
Alignment:
Q  89 gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaat 153  Q
    |||||||||||| |||||||||||| || |||||| ||||| ||| |||||||| || |||||||    
T  49034355 gttaaattgtttgtgcatatgctataagttgtttttataagctatattggagaacttctgaaaat 49034291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 3845687 - 3845580
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||||||||   ||| ||||| | ||||| || |||||||  ||||||||   |||||||| ||||| |||||||||||| || |||||||||    
T  3845687 ataagctatttctatagagaaagataaaattaagttgaaatgtttttctatatgctacatgctgttttcataagttatcttggagaacttatgaaaataa 3845588  T
Q  156 gttgaaaa 163  Q
    | ||||||    
T  3845587 gctgaaaa 3845580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 14145854 - 14145957
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaa 152  Q
    ||||||||| | || ||||||| || ||||| ||||||||||||||||| | ||||||||| || | |||| ||||| |||||||||  | || ||||||    
T  14145854 tgtataagcaagttttataacagaagataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaa 14145953  T
Q  153 taag 156  Q
    ||||    
T  14145954 taag 14145957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 21661449 - 21661504
Alignment:
Q  47 acacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||| ||||||||| || |||| || ||||||||||||    
T  21661449 acacttatgtataagctatttcaataacaaaatataaaattaaattaaattgtttt 21661504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 42808923 - 42808970
Alignment:
Q  56 tataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||    
T  42808923 tataagctgtttctataacaaaagataaaataaagttaaattgttttt 42808970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 84
Target Start/End: Complemental strand, 44284187 - 44284156
Alignment:
Q  53 atgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||||||    
T  44284187 atgtataagctatttctataacaaaaaataaa 44284156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 45535412 - 45535361
Alignment:
Q  52 tatgtataagctatttctataacaaaaaataaa-taaagttaaattgttttt 102  Q
    |||||| |||||||||||||||||||||||||| |||||| |||| ||||||    
T  45535412 tatgtagaagctatttctataacaaaaaataaattaaagtcaaatagttttt 45535361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 84
Target Start/End: Original strand, 48528515 - 48528550
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||||    
T  48528515 acttatgtataagctatttctataacaagaaataaa 48528550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 50952277 - 50952363
Alignment:
Q  55 gtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctat-tagctgttttaataagatatcttggaga 141  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||   ||| ||||| ||| |||| ||||||  |||||||||||    
T  50952277 gtataagctatttctataacaaaggataaataaagtt-aattgttttcatataagctatatagttgttgtaataaactatcttggaga 50952363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 1395611 - 1395661
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||| ||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattatttt 1395661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 2719416 - 2719513
Alignment:
Q  59 aagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||||| | ||||| ||||| |||||| |||||||||| |  || ||||| | ||||||| ||||| |||||||||||| || ||||||||||    
T  2719416 aagctatttctaaagcaaaatataaaataaagtgaaattgtttt-gtttaagctataaactgttttcataagctatcttggagaacttatgaaaataag 2719513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 23815989 - 23816038
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaataaagttaaattgt 98  Q
    |||||||||||||| ||||||||||| |||| || ||||||||||||||||    
T  23815989 cacttatgtataagttatttctataataaaagat-aataaagttaaattgt 23816038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 25447378 - 25447288
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttg 137  Q
    ||||| ||| ||| |||||||||||  |||| ||||| |||| |||||||||||||| ||| ||||| | ||||||| ||||| |||||||    
T  25447378 cacttttgtgtaaactatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataaactgttttcataagctatcttg 25447288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 32095317 - 32095235
Alignment:
Q  56 tataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttg 137  Q
    |||||| |||||||||||||||| || |||| ||||||||||||||||| |||  |||| ||| ||||| ||||  |||||||    
T  32095317 tataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcataatctatcttg 32095235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 34759659 - 34759625
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||| |||||||||||    
T  34759659 cttatgtataagctatttctatatcaaaaaataaa 34759625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 36445671 - 36445725
Alignment:
Q  51 ttatgtataagctatttctataacaaaa-aataaataaagttaaattgtttttgc 104  Q
    |||||||||||||||||||||||||||| |  ||||||||||| ||| |||||||    
T  36445671 ttatgtataagctatttctataacaaaagagaaaataaagttagattctttttgc 36445725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 42039097 - 42039131
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||| ||||||||||||||    
T  42039097 cttatgtataagctatttctgtaacaaaaaataaa 42039131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 43079680 - 43079714
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||| |||||||||||||||||||||||||||    
T  43079680 cttatgtgtaagctatttctataacaaaaaataaa 43079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 10101601 - 10101556
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgtttt 10101556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 10212526 - 10212481
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgtttt 10212481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 20257506 - 20257547
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    |||||||||||||||||||||| ||||||||| || ||||||    
T  20257506 aaataaagttaaattgtttttgtatatgctataagttgtttt 20257547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 35328297 - 35328244
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    |||||||||| || ||||| ||||| ||||  ||||||||||||||||||||||    
T  35328297 cacttatgtacaacctattactatagcaaaggataaataaagttaaattgtttt 35328244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 40122885 - 40122832
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||| ||||||||| || ||||||||| ||| ||||||    
T  40122885 acttatgtataagctatttcaataacaaaagataaaataaagtcaaactgtttt 40122832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 41028983 - 41028942
Alignment:
Q  50 cttatgtataagctatttctataacaaaa-aataaataaagt 90  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  41028983 cttatgtataagctatttctataacaaaagaaaaaataaagt 41028942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 51278286 - 51278237
Alignment:
Q  53 atgtataagctatttctataacaaaa-aataaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||| | |||||||||| ||| ||||||    
T  51278286 atgtataagctatttctataacaaaatattaaataaagtcaaactgtttt 51278237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 16073168 - 16073068
Alignment:
Q  57 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    |||||||||||||||| |||||  | |||| || |||||| ||||||| ||||| ||| |||||| || ||||| ||||||| |||| |  |||||||||    
T  16073168 ataagctatttctatagcaaaagttaaaattaatttaaatagtttttgtatatgttataagctgtcttcataagttatcttgaagaattgatgaaaataa 16073069  T
Q  156 g 156  Q
    |    
T  16073068 g 16073068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 20669115 - 20669143
Alignment:
Q  48 cacttatgtataagctatttctataacaa 76  Q
    |||||||||||||||||||||||||||||    
T  20669115 cacttatgtataagctatttctataacaa 20669143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 25185931 - 25185983
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgttttt 102  Q
    |||||| ||||| ||||| |||||||||| ||||||||||| |||| ||||||    
T  25185931 cttatgaataagatatttatataacaaaagataaataaagtcaaatggttttt 25185983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 38462220 - 38462304
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatc 134  Q
    |||| ||||||||||||||||| ||||| || ||||||||| ||| ||||||   ||||||||| | ||||||| ||||| ||||    
T  38462220 ttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatc 38462304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 44014216 - 44014252
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  44014216 cacttatgtataagctatttctataactaaagataaa 44014252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 44374776 - 44374724
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||| ||| |||||||| || ||||||||| ||||||||||    
T  44374776 cttatgtataagctatatctttaacaaaagataaaataaagtcaaattgtttt 44374724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 47217294 - 47217374
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataa 128  Q
    |||||| |||||||||||||| |||||||| || |||||| || ||||||| ||| |||| ||||| || |||||| ||||    
T  47217294 acttatctataagctatttctctaacaaaacataaaataatgtgaaattgtctttacataagctataagttgttttcataa 47217374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 47319404 - 47319376
Alignment:
Q  47 acacttatgtataagctatttctataaca 75  Q
    |||||||||||||||||||||||||||||    
T  47319404 acacttatgtataagctatttctataaca 47319376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 12425509 - 12425624
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||||||||| |||||| ||||  |||| ||||| ||||||||||||||||| | ||| ||||| ||||||||| | ||| |||||||||||| || ||    
T  12425509 cttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatg 12425608  T
Q  149 aaaataagttgaaaac 164  Q
    ||||||||||||||||    
T  12425609 aaaataagttgaaaac 12425624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 39105402 - 39105509
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||||||||||||||||||||| | ||| || |||| ||||||||||||||| | ||| ||||| | ||||||| ||||| |||||||||||| || ||    
T  39105402 cttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatg 39105501  T
Q  149 aaaataag 156  Q
    ||||||||    
T  39105502 aaaataag 39105509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 4014554 - 4014441
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaa 150  Q
    ||||||||||||||||||||| ||||| || ||||||||||| |||||||||| | |    || ||||||||| ||||| |||||||||||| || ||||    
T  4014554 tatgtataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctatcttggagaacttatgaa 4014455  T
Q  151 aataagttgaaaac 164  Q
    |||||| |||||||    
T  4014454 aataagctgaaaac 4014441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 7674584 - 7674701
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    ||||||| ||||||||||||||||| ||||| || ||||||| ||||||||||||   ||| || || |  |||||| ||||| |||||||||||| ||     
T  7674584 cacttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataagccataaaatgttttcataagctatcttggagaatttg 7674683  T
Q  147 tgaaaataagttgaaaac 164  Q
    |||||||||| |||||||    
T  7674684 tgaaaataagctgaaaac 7674701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 9202880 - 9202773
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||| |||||||||||||| || ||||| ||||| |||||||||||||||||   ||| || || ||||||||| ||||| ||||||| |||| || ||    
T  9202880 cttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatg 9202781  T
Q  149 aaaataag 156  Q
    ||||||||    
T  9202780 aaaataag 9202773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 34736660 - 34736566
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||| |||||||||||||||| ||||| | |||||||| |||||| |||||| ||| ||||| | ||||| | || || ||||||||||||    
T  34736660 cacttatgcataagctatttctatagcaaaagagaaataaagctaaattatttttgtataagctataaactgttatcattagctatcttggagaa 34736566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 43215323 - 43215369
Alignment:
Q  56 tataagctatttctataacaaaaaataaataaagttaaattgttttt 102  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  43215323 tataagctatttctataacaaaagataaataaagttaaattgctttt 43215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 1619028 - 1619108
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||| |||  | ||| ||||| ||||||||| |||||    
T  1619028 cacttttgtataagctatttctaaaacaaaaaat-aataaagttaaattctttccgtataagctataagctgttttcataag 1619108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 465890 - 465946
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||| |||||||||||||||| |||||| || ||||||||||||||||||||||    
T  465890 cacttatatataagctatttctatgacaaaagataaaataaagttaaattgtttttg 465946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 32372595 - 32372655
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||| ||||||||||| ||||||||| ||||||||| | ||| ||||||||||||    
T  32372595 aaataaagttgaattgtttttgtatatgctataagctgttttcacaagttatcttggagaa 32372655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 32859818 - 32859770
Alignment:
Q  81 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  32859818 taaataaagataaattgtttttgaatatgctataagctgttttaataag 32859770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 32861990 - 32861942
Alignment:
Q  81 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  32861990 taaataaagataaattgtttttgaatatgctataagctgttttaataag 32861942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 32862774 - 32862726
Alignment:
Q  81 taaataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    ||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  32862774 taaataaagataaattgtttttgaatatgctataagctgttttaataag 32862726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 39594753 - 39594860
Alignment:
Q  57 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||||||||  |||| || |||||||| ||||||||||| ||||| | | | ||||||||| |||||||||||||  ||| || |||||||||    
T  39594753 ataagctatttctatagaaaaagataaaataaag-taaattgttttcgcataagttgtaagctgttttcataagatatcttgttgaacttatgaaaataa 39594851  T
Q  156 gttgaaaac 164  Q
    | |||||||    
T  39594852 gctgaaaac 39594860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 4855635 - 4855686
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtt 99  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  4855635 acttatgtattagctatttttataacaaaaaataaaataaagttaaattgtt 4855686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 10772013 - 10771961
Alignment:
Q  47 acacttatgtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    |||| ||||||||||||||||||||||||||||||   |||||||||||||||||    
T  10772013 acacatatgtataagctatttctataacaaaaaat--gtaaagttaaattgtttt 10771961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 29925786 - 29925893
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||| |||| ||||| ||||| ||  |||||||||||| || || |||||| || |||||  ||||| ||| |||||||| || |||||||||    
T  29925786 ataagctatttttatagcaaaagataaaatagcgttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataa 29925885  T
Q  156 gttgaaaa 163  Q
    ||||||||    
T  29925886 gttgaaaa 29925893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 6593238 - 6593351
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||  || || ||| ||||| ||||||||| ||||| || ||| ||||  || ||    
T  6593238 cttatgtataaacaatttctataacaaaagataaaataaagttaaatt-attctgtataggctataagctgttttgataagctaccttagagagcttatg 6593336  T
Q  149 aaaataagttgaaaa 163  Q
    |||||||| ||||||    
T  6593337 aaaataagctgaaaa 6593351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 11700100 - 11700214
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgc-tattagctgttttaataagatatcttggagaaatttt 147  Q
    |||||||||||||||||||||||  |||||||||| ||||||||  ||||||| | ||| || ||| || |||||| ||| | |||| ||||||| || |    
T  11700100 cttatgtataagctatttctatataaaaaaataaattaaagttatgttgttttcgtataagcttataagttgttttgatatgctatcgtggagaacttat 11700199  T
Q  148 gaaaataagttgaaa 162  Q
    ||||||||| |||||    
T  11700200 gaaaataagatgaaa 11700214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 12460131 - 12460081
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||||| |||||  |||||| ||||||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaataagttatattgtttt 12460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 14714970 - 14714928
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaataaagttaa 93  Q
    |||||||||||||||||||||||||||| ||||| ||||||||    
T  14714970 ttatgtataagctatttctataacaaaacataaacaaagttaa 14714928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 16458103 - 16458005
Alignment:
Q  57 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||| |||| ||||| |||||  || |||||||||||||| ||||||||| || |||||| || || ||  |||||||| || |||||||||    
T  16458103 ataagctatttttatagcaaaagataaaataacttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataa 16458005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 42583089 - 42583139
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  42583089 tatgtataaggtatttctataacaaaagatgaaataaagttaaattgtttt 42583139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 16937982 - 16937901
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||| ||||||||||||||| ||||||||| || |||||| ||| | ||| |||||||| ||  ||||||||| ||||||    
T  16937982 aaataacgttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaa 16937901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 25461038 - 25461143
Alignment:
Q  58 taagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 157  Q
    |||||||||| | || ||||| ||||||||||||  |||||||||| ||||| ||| || |||||| ||||| | | |||||||| |  ||||||||||     
T  25461038 taagctatttttctagcaaaagataaataaagttgtattgtttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagc 25461137  T
Q  158 tgaaaa 163  Q
    ||||||    
T  25461138 tgaaaa 25461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 10363696 - 10363740
Alignment:
Q  58 taagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgtttt 10363740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 18704167 - 18704127
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagt 90  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  18704167 cttatgtataagttatttctataacaaaagataaataaagt 18704127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 19460520 - 19460464
Alignment:
Q  48 cacttatgtataagctatttctataacaaaa-aataaataaagttaaattgtttttg 103  Q
    ||||||||||||| ||||||||||| ||||| | | |||||||||||||||||||||    
T  19460520 cacttatgtataaactatttctatatcaaaacattgaataaagttaaattgtttttg 19460464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Complemental strand, 23994802 - 23994734
Alignment:
Q  95 ttgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||| ||||||||| |||| |||| | ||| ||||||| ||||||| | |||||||||||||||    
T  23994802 ttgtttttgtatatgctataagctattttcacaagctatcttgtagaaattataaaaataagttgaaaa 23994734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 1465151 - 1465037
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||||||||||||||||||||| || |  || |||||||||||||| | |||||  || ||||| || | |||| ||||| |||||||||| | || ||    
T  1465151 cttatgtataagctatttctatagcataggataaaataaagttaaatcgcttttgtgtaagctataagttatttt-ataagctatcttggaggacttgtg 1465053  T
Q  149 aaaataagttgaaaac 164  Q
    |||||||| |||||||    
T  1465052 aaaataagctgaaaac 1465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 14675032 - 14674985
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattg 97  Q
    |||||||| ||||||||||||||||||   ||||||||||||||||||    
T  14675032 cttatgtagaagctatttctataacaagtgataaataaagttaaattg 14674985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 169
Target Start/End: Complemental strand, 25461438 - 25461328
Alignment:
Q  59 aagctatttctataacaaaaaata-aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 157  Q
    |||||||||| |||||||| | |  ||||||||||| ||||||||||||| ||||| | ||||||| ||||  |||||||| | | || ||||||||||     
T  25461438 aagctatttcaataacaaagagtgtaataaagttaa-ttgtttttgcataagctataaactgttttcataacctatcttggcgtatttatgaaaataagc 25461340  T
Q  158 tgaaaactgcta 169  Q
    ||||||| ||||    
T  25461339 tgaaaacagcta 25461328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 25461771 - 25461668
Alignment:
Q  57 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    ||||||||||| |||| ||||| |||||||  ||||||||| ||| | ||||| ||| || |||||| ||||| | | |||||||| || | ||||||||    
T  25461771 ataagctatttttatagcaaaagataaatatcgttaaattggtttagtatatgttataagttgtttttataagctctattggagaacttattaaaataag 25461672  T
Q  157 ttga 160  Q
    ||||    
T  25461671 ttga 25461668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 42582850 - 42582957
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||||||||||||||||| || | |||| || ||||||||||||||||| || |  || | ||| |||||||||  |||| ||| |||||||| || ||    
T  42582850 cttatgtataagctatttccatgataaaagatgaaataaagttaaattgtgttcgtttaaggtataagctgtttttgtaagctatattggagaacttatg 42582949  T
Q  149 aaaataag 156  Q
    ||||||||    
T  42582950 aaaataag 42582957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 1773557 - 1773523
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  1773557 cttatgtataagctatttctataacaaaagataaa 1773523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 7096259 - 7096225
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  7096259 cttatgtataagctatttctataacaaaagataaa 7096225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 7984952 - 7985022
Alignment:
Q  95 ttgtttttgcatat-gctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||||||||  ||||| |||| |||| ||||| |||||||||||| || |||||||||| |||||||    
T  7984952 ttgtttttgcataaagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaac 7985022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 13224367 - 13224401
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  13224367 cttatgtataagctatttctataacaaaagataaa 13224401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 29588818 - 29588852
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  29588818 cttatgtataagctatttctataacaaaatataaa 29588852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 37112390 - 37112336
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||||||||||||||||| | ||||| || ||| ||||||||||||||||||    
T  37112390 cttatgtataagctatttctacagcaaaagataaaacaaagttaaattgtttttg 37112336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 39128577 - 39128627
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtt 99  Q
    ||||||||||||||| ||||||||||||| || ||||||||| ||||||||    
T  39128577 cttatgtataagctaattctataacaaaagataaaataaagtcaaattgtt 39128627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 40452229 - 40452303
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    |||||||||||| |||||||||| |||| ||| ||||||||||||||| |||| |  || ||||| |||||||||    
T  40452229 cttatgtataagatatttctatagcaaataataaaataaagttaaattattttggtttaagctataagctgtttt 40452303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 42573911 - 42573814
Alignment:
Q  50 cttatgtataagctatttctataacaa------aaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    |||||||||||||||||||||||||||      |||| ||| |||||| || |||||| | ||| ||||| ||||||||| ||||| ||||| |||||    
T  42573911 cttatgtataagctatttctataacaaaagattaaaaaaaaaaaagttcaactgttttcgtataggctataagctgtttttataagctatctaggaga 42573814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 5377332 - 5377267
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctatt 114  Q
    |||||| |||| |||||| |||||||||| ||||| |||||| |||||||||||| ||| ||||||    
T  5377332 cttatgcataaactatttatataacaaaagataaactaaagtgaaattgtttttgtataagctatt 5377267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 7319136 - 7319033
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattag---ctgttttaataagatatcttggagaaattttgaaaa 152  Q
    ||||||||||||||   ||||| ||||| |||||| |||||||||| || || |||||||    ||||||| ||||| |||||||||||| || ||||||    
T  7319136 ataagctatttctaacgcaaaatataaaataaagtgaaattgttttcgcttaagctattataaactgttttcataagctatcttggagaacttatgaaaa 7319037  T
Q  153 taag 156  Q
    ||||    
T  7319036 taag 7319033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 7853602 - 7853647
Alignment:
Q  56 tataagctatttctataacaaaaaat-aaataaagttaaattgttt 100  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||    
T  7853602 tataaactatttctataacaaaagataaaataaagttaaattgttt 7853647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 10639897 - 10639998
Alignment:
Q  56 tataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 154  Q
    ||||||||||||||||| ||||| || |||| || |||||||||||||| |||||  || || |||||  ||||  ||| |||||||| || ||||||||    
T  10639897 tataagctatttctatagcaaaagataaaattaaattaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaata 10639996  T
Q  155 ag 156  Q
    ||    
T  10639997 ag 10639998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 12407792 - 12407759
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  12407792 ttatgtataagctatttctataacaaaagataaa 12407759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 16889673 - 16889753
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    ||||||||||||||||||| ||||||||| ||||| | |||| ||| |||||||  | | ||||| ||||||||| |||||    
T  16889673 cttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataag 16889753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 36796836 - 36796764
Alignment:
Q  52 tatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    |||||||||| |||||||  |||||||||| |||||| |||||||| ||||  |||| ||||| |||||||||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataagctgtttt 36796764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 12464598 - 12464491
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||||| ||  |||| ||||| ||||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||||| || |||||||||    
T  12464598 ataagctatttctgtagaaaaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataa 12464499  T
Q  156 gttgaaaa 163  Q
    | ||||||    
T  12464498 gctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 4026755 - 4026874
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    ||||| |||||||||||| |||| ||||| ||||| |||||||||||| ||||||||||   ||| ||||||||| ||||  |||| || |||| || ||    
T  4026755 cttatctataagctatttttatagcaaaagataaaataaagttaaattatttttgcataaattataagctgttttcataaattatcctgaagaacttatg 4026854  T
Q  149 aaaataagttgaaaactgct 168  Q
    |||||||| |||||||||||    
T  4026855 aaaataagctgaaaactgct 4026874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 42457887 - 42458001
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    |||||||||| |||||||||||  |||| ||||| |||||||||||||||||||  || ||| |||||||| || ||||| |||||| |||||  | |||    
T  42457887 ttatgtataatctatttctatagtaaaagataaaataaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatga 42457986  T
Q  150 aaataagttgaaaac 164  Q
    ||||||| |||||||    
T  42457987 aaataagctgaaaac 42458001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 43279652 - 43279547
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||| |||| ||||| ||||| ||| || ||||||||||||  |||||||| || |||||| ||||| ||| |||||||| || |||||||||    
T  43279652 ataagctatttttatatcaaaagataaaataatgtgaaattgtttttg--tatgctataagttgtttttataagctatattggagaacttgtgaaaataa 43279555  T
Q  156 gttgaaaa 163  Q
    ||||||||    
T  43279554 gttgaaaa 43279547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 18066069 - 18066180
Alignment:
Q  53 atgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaa 151  Q
    ||||| |||||||||||| |  |||| || ||||||||||||||||||||   ||| ||||| ||||||||| ||||| |||||||||||| ||  ||||    
T  18066069 atgtagaagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaa 18066168  T
Q  152 ataagttgaaaa 163  Q
    ||||| ||||||    
T  18066169 ataaggtgaaaa 18066180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 41851507 - 41851580
Alignment:
Q  83 aataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    ||||||||||||||||||||| ||||||||| || |||||| | ||| |||||||||||| || ||||| ||||    
T  41851507 aataaagttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaag 41851580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 3611164 - 3611271
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||| |||   |||   ||||||| | ||| |||||||||||| || ||    
T  3611164 cttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttttgtatagtttatagactgttttcacaagctatcttggagaacttatg 3611263  T
Q  149 aaaataag 156  Q
    ||||||||    
T  3611264 aaaataag 3611271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 29316908 - 29316793
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaatttt 147  Q
    |||||||| |||||||| ||| ||||| || ||||| ||| |||||||||||||  ||||  |||| ||||||||| || || |||||||||||| || |    
T  29316908 acttatgtctaagctatatctttaacagaagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttat 29316809  T
Q  148 gaaaataagttgaaaa 163  Q
    | ||||||| ||||||    
T  29316808 ggaaataagctgaaaa 29316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 41241257 - 41241150
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||||||||||  |||| ||||| | ||||||||||||||||| ||||||||| ||  |||||  |||| ||||||||| || || ||||| |||    
T  41241257 ataagctatttctataggaaaagataaaatgaagttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaa 41241158  T
Q  156 gttgaaaa 163  Q
    | ||||||    
T  41241157 gctgaaaa 41241150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 5133710 - 5133784
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    ||||||||||||||||||||||||||||| || |||||||| |||| |||||||  ||| | ||| |||||||||    
T  5133710 cttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgtttt 5133784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 29430695 - 29430745
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||||||||  |||||||||| ||| ||||||    
T  29430695 ttatgtataagctatttctataacaaaagttaaataaagtcaaactgtttt 29430745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 39567839 - 39567921
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    ||||| |||||||| |||||||||||||||| || |||||||||||||||||||    ||| ||||| ||||||||| |||||    
T  39567839 cacttgtgtataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataag 39567921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 33319907 - 33319830
Alignment:
Q  86 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||| |||||||| |||| |||| | ||||||| ||||  |||||||||||| || |||||||||| ||||||    
T  33319907 aaagttaaactgtttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 33319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 40837557 - 40837508
Alignment:
Q  53 atgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgtttt 40837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 3673745 - 3673797
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||| || |||||||||||||||| || ||||||||||||||||||||    
T  3673745 cttatgtattagttatttctataacaaaatataaaataaagttaaattgtttt 3673797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 41407246 - 41407346
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattg-tttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 154  Q
    ||||||||||||| || ||||| ||||| ||||||||||||| |||||| ||||||||| || | |||| ||||| | |||| ||||| || ||||||||    
T  41407246 ataagctatttctgtaccaaaagataaaataaagttaaattgttttttgtatatgctataagttatttttataagttttctttgagaacttgtgaaaata 41407345  T
Q  155 a 155  Q
    |    
T  41407346 a 41407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 9174749 - 9174867
Alignment:
Q  47 acacttatgtataagctatttctata--acaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaat 144  Q
    ||||||||||||||||||||||||||  |||| ||| ||||| |||||||| | |||   || | |||| ||||||||| ||||| ||||||  |||  |    
T  9174749 acacttatgtataagctatttctatagcacaagaaaaaaatatagttaaatagctttcatatttactataagctgttttcataagctatcttacagagct 9174848  T
Q  145 tttgaaaataagttgaaaa 163  Q
    | |||||||||| ||||||    
T  9174849 tatgaaaataagctgaaaa 9174867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 19629239 - 19629290
Alignment:
Q  52 tatgtataagctatttctataacaaaaaataaa-taaagttaaattgttttt 102  Q
    |||||| |||||||||||||||||||||||||| |||||| |||| ||||||    
T  19629239 tatgtagaagctatttctataacaaaaaataaattaaagtcaaatagttttt 19629290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 19826140 - 19826191
Alignment:
Q  52 tatgtataagctatttctataacaaaaaataaa-taaagttaaattgttttt 102  Q
    |||||| |||||||||||||||||||||||||| |||||| |||| ||||||    
T  19826140 tatgtagaagctatttctataacaaaaaataaattaaagtcaaatagttttt 19826191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 26202025 - 26202080
Alignment:
Q  108 tgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||| || |||||| ||||||||| |||||||| || |||||||||||||||||    
T  26202025 tgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaa 26202080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 39073788 - 39073709
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaa 161  Q
    |||||| ||||||||||||||| ||||||||| ||   |||| ||||| ||| |||||||| |  |||||||||||||||    
T  39073788 aaataacgttaaattgtttttgtatatgctataagtaatttttataagctatattggagaactagtgaaaataagttgaa 39073709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 45229457 - 45229563
Alignment:
Q  57 ataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    |||||||||||||||| ||||  || |||| | ||||||||||||||| ||||| ||| |  |||||| ||||| |||||| ||||| || |||||||||    
T  45229457 ataagctatttctatagcaaacgataaaatgaggttaaattgtttttgtatatgttatca-ttgttttcataagctatcttcgagaacttatgaaaataa 45229555  T
Q  156 gttgaaaa 163  Q
    | ||||||    
T  45229556 gctgaaaa 45229563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 165
Target Start/End: Complemental strand, 656903 - 656793
Alignment:
Q  56 tataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 154  Q
    ||||||||||||||||||||||| || ||||| | | |||||||||| | ||| ||| | || || ||| ||||| ||||||| |||  || ||||||||    
T  656903 tataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaata 656804  T
Q  155 agttgaaaact 165  Q
    || ||||||||    
T  656803 agatgaaaact 656793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 1625871 - 1625953
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||||||||||||||| | ||| | ||| || |||||| ||||| |||||||||||| ||  |||||| || |||||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaac 1625953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 26626848 - 26626926
Alignment:
Q  86 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||||||||||| | ||| ||||  ||||||||| ||||| ||||||| |||| || |||||||||  |||||||    
T  26626848 aaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaac 26626926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 29633016 - 29633062
Alignment:
Q  56 tataagctatttctataacaaaaaata-aataaagttaaattgtttt 101  Q
    |||||| |||||||||||||||||||| |||||||| ||||||||||    
T  29633016 tataagttatttctataacaaaaaatagaataaagtcaaattgtttt 29633062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 36114655 - 36114601
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttg 103  Q
    |||||| |||| ||| ||||||||||||| ||||| |||||||||||||||||||    
T  36114655 cttatgcataacctagttctataacaaaagataaaataaagttaaattgtttttg 36114601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 41033082 - 41033048
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  41033082 cttatgtataagctatttctataacaaaagataaa 41033048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 101
Target Start/End: Original strand, 42907303 - 42907349
Alignment:
Q  56 tataagctatttctataaca-aaaaataaataaagttaaattgtttt 101  Q
    |||||||||||||||||||| || || ||||||||||||||||||||    
T  42907303 tataagctatttctataacagaagaaaaaataaagttaaattgtttt 42907349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 680483 - 680556
Alignment:
Q  91 taaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    ||||||||||| | ||| ||||| |||| |||| ||||| ||||||| |||| || |||||||||| |||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaac 680556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 142
Target Start/End: Original strand, 3102631 - 3102724
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||||||||||||||||| |||| ||||| || ||||||||| ||| | |||||  |||  |||||||||||||| ||||  |||| |||||||    
T  3102631 cttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctattagctgttttcataatttatcatggagaa 3102724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 10490600 - 10490681
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||| |||||||||||| || ||||||||| || |||||| |||||  ||||| || || || | |||||||||||||||    
T  10490600 aaataacgttaaattgtttctgtatatgctataaggtgttttcataagtcatcttcgaaaagttatcaaaataagttgaaaa 10490681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 27288318 - 27288351
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||| ||||||||||||||||||||||||    
T  27288318 ttatgtatatgctatttctataacaaaaaataaa 27288351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 38239682 - 38239649
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  38239682 ttatgtataagctatttctataacaaaagataaa 38239649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 2416251 - 2416331
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    |||||||||||| ||||||| || ||||| ||||| | |||||||||||||||   ||| ||||| ||||||||| |||||    
T  2416251 cttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttttataag 2416331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 3227789 - 3227741
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaat-aaagttaaattgtttt 101  Q
    |||||||||| ||||||||| ||||||||||  ||||||||||||||||    
T  3227789 tgtataagctgtttctataataaaaaataaaacaaagttaaattgtttt 3227741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 7193981 - 7193933
Alignment:
Q  53 atgtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||| ||||| ||| | |||| |||||    
T  7193981 atgtataagctatttctataacaaaatataaagaaattaaaatggtttt 7193933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 7825194 - 7825242
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    |||||||||||||| |||||||||| ||||| |||||||||||| ||||    
T  7825194 tgtataagctatttttataacaaaagataaagtaaagttaaattttttt 7825242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 10143110 - 10143202
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    |||||||||||| |||||||||||||||| || |||| |||| ||| |||||||  ||| ||||| || | |||| ||||| |||| ||||||    
T  10143110 cttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggaga 10143202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 15288738 - 15288710
Alignment:
Q  50 cttatgtataagctatttctataacaaaa 78  Q
    |||||||||||||||||||||||||||||    
T  15288738 cttatgtataagctatttctataacaaaa 15288710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 18962170 - 18962118
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    ||||||||| |||||||| |||||||||| ||||| |||||||||| ||||||    
T  18962170 cttatgtattagctatttttataacaaaagataaaataaagttaaactgtttt 18962118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 32098440 - 32098388
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||| ||||||||||||||||||||||| || ||||||||| ||| ||||||    
T  32098440 cttatatataagctatttctataacaaaagataaaataaagtcaaagtgtttt 32098388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 33267648 - 33267596
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||| |||||||||||||||| | | ||||||||||||| ||||||    
T  33267648 cttatgtataatctatttctataacaaacagtaaaataaagttaaactgtttt 33267596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 103
Target Start/End: Original strand, 40758967 - 40759015
Alignment:
Q  56 tataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||||||||| ||||||||| || ||||||||| ||||||||||||    
T  40758967 tataagctatttccataacaaaagataaaataaagtcaaattgtttttg 40759015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 42420426 - 42420366
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatg 109  Q
    |||| ||||||||||||| |||| ||||| ||||| ||| ||||||||||||||| |||||    
T  42420426 cttacgtataagctatttttatagcaaaagataaaataacgttaaattgtttttgtatatg 42420366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 31624200 - 31624302
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaataaagtt-aaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaa 152  Q
    ||||||||||||||||||||||||| |||||  ||||| |||||||||| | |||  |||||||||||||||||||| | |||||| |||||| ||||||    
T  31624200 tgtataagctatttctataacaaaagataaaataagtttaaattgttttcgtataatctattagctgttttaataagctgtcttggtgaaattatgaaaa 31624299  T
Q  153 taa 155  Q
    |||    
T  31624300 taa 31624302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 161
Target Start/End: Complemental strand, 6909998 - 6909892
Alignment:
Q  57 ataagctatttctataacaaaa--aataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 154  Q
    ||||||||||||||||  ||||  || |||||||||||||||||||||| ||||||||| || |||||| |||| ||||||||||||| || ||||| ||    
T  6909998 ataagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaatta 6909899  T
Q  155 agttgaa 161  Q
    || ||||    
T  6909898 agctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 9093688 - 9093573
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||| |||||||||||||||| ||||| ||||| ||||||||||||||||| | ||| ||||| ||||||||| ||||| | |||| ||||| ||  |    
T  9093688 cttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaag 9093589  T
Q  149 aaaataagttgaaaac 164  Q
    |||||||| |||||||    
T  9093588 aaaataagctgaaaac 9093573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 78 - 163
Target Start/End: Complemental strand, 34430564 - 34430479
Alignment:
Q  78 aaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||||| | |||||||||||| ||||| ||| || |||||| ||||| |||||||||||| || |||||||||| ||||||    
T  34430564 aaataaataaaataaaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaa 34430479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 6647327 - 6647440
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||||  |||   ||| | ||| | ||||||| ||||| |||||| ||||  || |||    
T  6647327 cttatgtataagttatttctataacaaaaaat-aataaagtcaaattactttaatataggttataatctgttttcataagctatcttagagagcttatga 6647425  T
Q  150 aaataagttgaaaac 164  Q
    |||||||||||||||    
T  6647426 aaataagttgaaaac 6647440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 2735013 - 2735114
Alignment:
Q  56 tataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 154  Q
    |||||||||| |||||||||||| ||||| |||||||||||| |||||| |||  |||| ||||||||| |||||  |||||| | || || ||||||||    
T  2735013 tataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaata 2735112  T
Q  155 ag 156  Q
    ||    
T  2735113 ag 2735114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 163
Target Start/End: Original strand, 35098981 - 35099089
Alignment:
Q  58 taagctatttctata--acaaaaaataaataaa-gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 154  Q
    |||||||||||||||  | |||||||||| ||  ||| ||||||||||| ||||| ||| || |||||| ||||| |||||| ||| | |||||||||||    
T  35098981 taagctatttctataggaaaaaaaataaaaaattgtttaattgtttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaata 35099080  T
Q  155 agttgaaaa 163  Q
    |||||||||    
T  35099081 agttgaaaa 35099089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 6654553 - 6654645
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    |||||||||||| ||||||||||||||| ||| |||| |||| ||||||||||||  ||  || | ||||||||||||| | |||||||||||    
T  6654553 cttatgtataagttatttctataacaaataataaaattaagtcaaattgtttttgtttaaactttaagctgttttaatatgctatcttggaga 6654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 133
Target Start/End: Complemental strand, 29274361 - 29274277
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatat 133  Q
    ||||||||||||||||||||||| ||||| || ||||||||| ||||||||||   ||| ||||| | ||||||| |||||||||    
T  29274361 cttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataagatat 29274277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 48 - 164
Target Start/End: Original strand, 31624020 - 31624143
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataa-ataaagttaaattgtttttgcatatgct------attagctgttttaataagatatcttggag 140  Q
    ||||||||| |||||||||   ||||||||  |||| |||||||||||| ||||||| ||| |||      || ||||||||| ||| | ||||||||||    
T  31624020 cacttatgtgtaagctattctgataacaaaggataatataaagttaaatcgtttttgtataggcttaagctataagctgttttcataggctatcttggag 31624119  T
Q  141 aaattttgaaaataagttgaaaac 164  Q
    ||||| ||||||||||||||||||    
T  31624120 aaattatgaaaataagttgaaaac 31624143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 6536597 - 6536667
Alignment:
Q  93 aattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||||||||| ||||||||| || |||||| | ||| ||| |||||||| || |||||||||||||||||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaa 6536667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 11784135 - 11784069
Alignment:
Q  76 aaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||| ||||| || |||||||||||||| ||||||||| ||||||||| ||||| ||| ||||||||    
T  11784135 aaaattaaattaaattaaattgtttttgtatatgctataagctgttttcataagctatattggagaa 11784069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 27893986 - 27894099
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    |||||||||||||||||||| |||| || || ||||||||| ||||||||||   |||  ||||||| |||||| ||||||||||||| | |  || |||    
T  27893986 ttatgtataagctatttctacaacagaatataaaataaagtcaaattgttttaatataaactattag-tgttttcataagatatcttgaaaagcttatga 27894084  T
Q  150 aaataagttgaaaac 164  Q
    ||||||| |||||||    
T  27894085 aaataagctgaaaac 27894099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 24626240 - 24626329
Alignment:
Q  57 ataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaatt 145  Q
    ||||||||||||||||  |||  |||||  |||||||||||||||||| |||| |||| || |||||| ||||| |||||||||| ||||    
T  24626240 ataagctatttctataggaaaggataaaacaaagttaaattgtttttgtatattctataagttgttttcataagctatcttggagtaatt 24626329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 507158 - 507222
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctat 113  Q
    |||||||||||  |||||||||||||||| || ||||||||||| |||||||||| ||| |||||    
T  507158 cttatgtataaattatttctataacaaaagataaaataaagttagattgtttttgtataagctat 507222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 430509 - 430454
Alignment:
Q  49 acttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||||||||||||||||||||  |||| || ||||||||||||||| ||||||    
T  430509 acttatgtataagctatttctatataaaaagatgaaataaagttaaattatttttg 430454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 24836330 - 24836279
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    ||||||||||| |||||||||||||||| || ||||||||| ||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgtttt 24836279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 141
Target Start/End: Complemental strand, 33787876 - 33787785
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    |||||||||| ||||||||||||||||| || ||| ||||| |||||| |||   ||| | ||| ||||||||| ||||| |||||||||||    
T  33787876 ttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttggaga 33787785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 835324 - 835266
Alignment:
Q  106 tatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||| ||| ||||| ||||| |||||||||||| || |||||||||| |||||||    
T  835324 tatgctataagcagttttcataagctatcttggagaacttatgaaaataagctgaaaac 835266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 836636 - 836558
Alignment:
Q  86 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    |||||||||||||||| | ||  |||||||||||| || ||||| |||||||| ||| || ||||||| || |||||||    
T  836636 aaagttaaattgttttggtatgagctattagctgtgttcataagctatcttggggaacttatgaaaatgagctgaaaac 836558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 163
Target Start/End: Original strand, 4006652 - 4006766
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||| ||||| |||||||||||||||  ||||| |||||| |||||||||||  ||| ||||| || |||||| ||||| ||||   ||||  || ||    
T  4006652 cttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatg 4006751  T
Q  149 aaaataagttgaaaa 163  Q
    |||||||| ||||||    
T  4006752 aaaataagctgaaaa 4006766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 4247766 - 4247732
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  4247766 cttatgtataagctatttctataacaaaagataaa 4247732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 10452492 - 10452458
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  10452492 cttatgtataagctatttctataacaaaatataaa 10452458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 31461616 - 31461650
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  31461616 cttatgtataagctatttctataacaaaagataaa 31461650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 31668817 - 31668783
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  31668817 cttatgtataagctatttctataacaaaacataaa 31668783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 33736774 - 33736824
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattg 97  Q
    |||||||||||||| ||||||||||||| || || ||||||||||||||||    
T  33736774 cacttatgtataagttatttctataacataacataaaataaagttaaattg 33736824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 35095058 - 35094944
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    |||||||||| | ||||||||||||||| || |||||| || |||||||||||  | | | |||  ||||||||  || |||||| ||||||  || |||    
T  35095058 ttatgtataaaccatttctataacaaaatataaaataatgtcaaattgtttttttacaagttatatgctgtttttgtatgatatcgtggagagcttatga 35094959  T
Q  150 aaataagttgaaaac 164  Q
    |||||||||||||||    
T  35094958 aaataagttgaaaac 35094944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 6538485 - 6538562
Alignment:
Q  84 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaa 161  Q
    |||| |||||||||||| || ||||||||| || |||||| ||| | ||| |||||||| || | |||||||||||||    
T  6538485 ataatgttaaattgtttatgtatatgctataagttgtttttataggctatattggagaacttattaaaataagttgaa 6538562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 8349792 - 8349743
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaa-taaagttaaattgttttt 102  Q
    ||||||| |||||||| |||||||| ||||| ||||||||||||||||||    
T  8349792 tgtataaactatttctctaacaaaagataaaataaagttaaattgttttt 8349743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 24476537 - 24476574
Alignment:
Q  47 acacttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||| ||||| |||||    
T  24476537 acacttatgtataagctatttctatagcaaaagataaa 24476574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 79
Target Start/End: Complemental strand, 33069658 - 33069629
Alignment:
Q  50 cttatgtataagctatttctataacaaaaa 79  Q
    ||||||||||||||||||||||||||||||    
T  33069658 cttatgtataagctatttctataacaaaaa 33069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 156
Target Start/End: Original strand, 33117478 - 33117586
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    |||||||| |||||||| || |||| ||||| ||||| | ||||||||||||||||  ||||| ||| ||||| |||||  || ||||||||| || ||     
T  33117478 cacttatgcataagctacttttatagcaaaatataaaattaagttaaattgttttt-tatatgttataagctgatttaaatagctatcttggataactta 33117576  T
Q  147 tgaaaataag 156  Q
    ||||||||||    
T  33117577 tgaaaataag 33117586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 33500612 - 33500579
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  33500612 ttatgtataagctatttctataacaaaagataaa 33500579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 141
Target Start/End: Original strand, 2206532 - 2206620
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggaga 141  Q
    |||||||| ||||| |||||||||| ||||| ||||||  ||||||||||  ||| ||||| | ||||||  ||||| |||||||||||    
T  2206532 tgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctatgaactgtttacataagctatcttggaga 2206620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 8147647 - 8147731
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggag 140  Q
    ||||||||||| |||| ||||| ||||| ||||||| ||||||||||| |||| |||  || |||||| ||||| ||| ||||||    
T  8147647 ataagctatttttatagcaaaagataaaataaagttgaattgtttttgtatattctaaaagatgttttcataagctatattggag 8147731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 9559673 - 9559621
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||| |||||||||| ||||| || ||||||| ||||||||||||    
T  9559673 cttatgtataagttatttctatagcaaaagataaaataaatttaaattgtttt 9559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 10836759 - 10836799
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagt 90  Q
    |||||||||||| ||| |||||||||||| |||||||||||    
T  10836759 cttatgtataagttatatctataacaaaagataaataaagt 10836799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 12836376 - 12836456
Alignment:
Q  62 ctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaa 142  Q
    |||| |||||| ||||| ||||||||||||||| ||| | ||  ||||| || |||| |||| ||||| ||||||||||||    
T  12836376 ctatatctatagcaaaagataaataaagttaaaatgtgtgtgggtatgcaataagctcttttcataagttatcttggagaa 12836456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 20368279 - 20368199
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 162  Q
    |||| ||||| ||||||||||| ||  | ||| || |||||| ||||| | |||||||||| || ||||||||||||||||    
T  20368279 aaatgaagttgaattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaa 20368199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 33678724 - 33678833
Alignment:
Q  56 tataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaata 154  Q
    |||||||| || | ||| ||||| ||||| ||||||||||| ||||||| | | ||||| ||||||||| ||||| ||||||||| || || ||||||||    
T  33678724 tataagctcttcccatagcaaaagataaagtaaagttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaata 33678823  T
Q  155 agttgaaaac 164  Q
    ||||||||||    
T  33678824 agttgaaaac 33678833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 46280369 - 46280290
Alignment:
Q  84 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||||| ||| |||||||| || |||||||| | ||||||    
T  46280369 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 44821930 - 44822012
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    ||||||||| |||||||||||| ||| | ||| ||||||||| ||||| |||  ||||||| || ||||||||||||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaac 44822012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 43153030 - 43152981
Alignment:
Q  54 tgtataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagttaaattgttttt 43152981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 5369821 - 5369738
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatc 134  Q
    ||||||||||||||| |||||||| ||||||| |||||||| ||| ||||||   ||||||||| ||||||||| ||||| ||||    
T  5369821 cttatgtataagctaattctataa-aaaaaattaataaagtcaaactgttttcatatatgctataagctgttttcataagctatc 5369738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 37064586 - 37064482
Alignment:
Q  60 agctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 158  Q
    ||||||||||||| | ||| || ||||| ||||||||||||||| |||||||||| |||||||||  |||| ||| || ||| | || |||||||||| |    
T  37064586 agctatttctatagccaaagatgaaatacagttaaattgtttttacatatgctataagctgttttcgtaagctattttagaggacttatgaaaataagct 37064487  T
Q  159 gaaaa 163  Q
    |||||    
T  37064486 gaaaa 37064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 39279910 - 39280014
Alignment:
Q  60 agctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagtt 158  Q
    ||||||||||||  ||||| ||||| | |||||||||||||| || ||||| |||  |||| ||| ||||  |||||||||||| ||||||||||||| |    
T  39279910 agctatttctattgcaaaagataaaattaagttaaattgtttgtgtatatgttataggctgatttcataaattatcttggagaacttttgaaaataagct 39280009  T
Q  159 gaaaa 163  Q
    |||||    
T  39280010 gaaaa 39280014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 49060479 - 49060531
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgttttt 102  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaaattattttt 49060531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 163
Target Start/End: Original strand, 420305 - 420412
Alignment:
Q  57 ataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    ||||||||| | |||| ||||| ||||| ||| ||| ||||||||||| ||||||||| || |||||   |||| ||| |||||||| || |||||||||    
T  420305 ataagctatgtttatagcaaaagataaaataatgttcaattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataa 420404  T
Q  156 gttgaaaa 163  Q
    ||||||||    
T  420405 gttgaaaa 420412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 43648225 - 43648292
Alignment:
Q  96 tgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||| | ||||| ||| ||||||||| ||||| ||||||||||||| | |||||||||||||||||    
T  43648225 tgttttcgtatatgatataagctgttttcataagctatcttggagaaaatatgaaaataagttgaaaa 43648292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 156
Target Start/End: Original strand, 47177578 - 47177681
Alignment:
Q  54 tgtataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaa 152  Q
    |||||||| |||||||||| ||||| | |||  ||||||||||||||||   ||| ||||| ||||||||| | ||| |||||||||||| || ||||||    
T  47177578 tgtataaggtatttctatatcaaaatacaaaacaaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaa 47177677  T
Q  153 taag 156  Q
    ||||    
T  47177678 taag 47177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 6824858 - 6824908
Alignment:
Q  52 tatgtataagctatttctataacaaaaaata-aataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||||    
T  6824858 tatgtataagctatttctataacaaaagatagaacaaagttaaattgtttt 6824908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 169
Target Start/End: Original strand, 39907739 - 39907861
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    |||||||||||||| ||||||   | |||||| |||| ||| ||||||||||||||| ||| ||||| | ||||||| ||||  |||||| ||||| |      
T  39907739 cacttatgtataagatatttcctcagcaaaaagtaaaataaggttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaa 39907838  T
Q  147 tgaaaataagttgaaaactgcta 169  Q
    |||||||||| ||||||| ||||    
T  39907839 tgaaaataagctgaaaacagcta 39907861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 40252202 - 40252132
Alignment:
Q  86 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||| ||||||| ||||| ||| |||| |||| ||||| |||||||||||| || ||||||||||    
T  40252202 aaagttaaatcgtttttgtatatgttataagctcttttcataagttatcttggagaacttatgaaaataag 40252132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 164
Target Start/End: Complemental strand, 2767312 - 2767195
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    |||||| |||||| ||||||||||||||||| || |||||||  |||||||||||  |||| ||||| |||  || | || || |||||||| ||| ||     
T  2767312 cacttaagtataatctatttctataacaaaagataaaataaatataaattgttttcacataagctatgagcgattctcatgagttatcttggtgaattta 2767213  T
Q  147 tgaaaataagttgaaaac 164  Q
    || |||||||||||||||    
T  2767212 tggaaataagttgaaaac 2767195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 163
Target Start/End: Complemental strand, 17944442 - 17944361
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||||||||||||||||||| ||||| | | || |||||| ||||| ||||||||| || || ||||| |||| ||||||    
T  17944442 aaataaagttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaa 17944361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 20269551 - 20269628
Alignment:
Q  86 aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaa 163  Q
    |||||||||||||||||| | ||| ||| || ||||||| |||| | | |||||||| || |||||||||||||||||    
T  20269551 aaagttaaattgtttttgtaaatgttataagttgttttactaagctgtattggagaatttatgaaaataagttgaaaa 20269628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 103
Target Start/End: Complemental strand, 28613665 - 28613612
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttg 103  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||||||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttg 28613612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 2223087 - 2223139
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa-taaagttaaattgttttt 102  Q
    |||||||||||||||||||||||||||| |||||  ||||| |||||||||||    
T  2223087 ttatgtataagctatttctataacaaaagataaagaaaagtcaaattgttttt 2223139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 156
Target Start/End: Original strand, 17248491 - 17248598
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaa---gttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    ||||||| ||||||||||||| | ||||| ||||| |||   ||||||||||||||| ||| ||||| |||| |||| |||||  ||||| ||||| ||     
T  17248491 cttatgtgtaagctatttctagatcaaaagataaaaaaaaaagttaaattgtttttgtataagctataagctcttttcataag--atcttagagaactta 17248588  T
Q  147 tgaaaataag 156  Q
    ||||||||||    
T  17248589 tgaaaataag 17248598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 35536045 - 35536097
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||| || || ||||||||| ||||||||||    
T  35536045 cttatgtataagctatttctataacataagataaaataaagtcaaattgtttt 35536097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 43694667 - 43694595
Alignment:
Q  84 ataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    ||||| |||||||||||||| ||||||||| ||||||||| ||||| ||| | | |||| || ||||||||||    
T  43694667 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataag 43694595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 15309664 - 15309589
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagt 157  Q
    |||||||||||||||||||||| ||||| | | || |||||| ||||| ||| | |||||| || |||||||||||    
T  15309664 aaataaagttaaattgtttttgtatatgttttaagttgttttcataagttatttcggagaatttatgaaaataagt 15309589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 28165029 - 28165144
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttg 148  Q
    |||||||||||| | |||||||||||||| || |||| |||| ||||||||||   ||| ||||| | |||| || ||||| |||| ||||||  || ||    
T  28165029 cttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatg 28165128  T
Q  149 aaaataagttgaaaac 164  Q
     |||||||||||||||    
T  28165129 gaaataagttgaaaac 28165144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 30496643 - 30496694
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||| ||||||||||||||||| || ||||||||| ||||||||||    
T  30496643 ttatgtataaactatttctataacaaaatataaaataaagtcaaattgtttt 30496694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 33894561 - 33894612
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttt 101  Q
    ||||||||||||||||||||||||||||| |||||  |||| ||| ||||||    
T  33894561 cttatgtataagctatttctataacaaaagataaaataagtcaaactgtttt 33894612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 34083644 - 34083577
Alignment:
Q  63 tatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    |||||||||| ||||| ||||| |||||||||||||||| || ||| ||||| ||||||||| |||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataag 34083577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 39279708 - 39279791
Alignment:
Q  57 ataagctatttctataacaaaaaataaat-aaagttaaattgtttttgcatatgctattagctgttttaataagatatcttgga 139  Q
    ||||||| |||||||| ||||| |||||  |||||||||||| ||||| |||| |||| ||||| ||| ||||| |||||||||    
T  39279708 ataagctgtttctatagcaaaagataaaacaaagttaaattgcttttgtatattctataagctggtttcataagttatcttgga 39279791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 118 - 165
Target Start/End: Complemental strand, 47130848 - 47130801
Alignment:
Q  118 tgttttaataagatatcttggagaaattttgaaaataagttgaaaact 165  Q
    |||||| ||||| |||||||||||| || |||||||||||||||||||    
T  47130848 tgttttcataagctatcttggagaacttgtgaaaataagttgaaaact 47130801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 47795893 - 47795967
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    ||||||||||||| ||||||||||| | |||| ||||| ||||||||||||||||  ||| ||||| | |||||||    
T  47795893 cacttatgtataacctatttctatatc-aaaagtaaattaagttaaattgtttttatataagctataaactgtttt 47795967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 20526417 - 20526491
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    ||||||||||||||| | |||| | ||||||| ||||||||| ||||| ||| |||||||| |  ||||||||||    
T  20526417 aaataaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataag 20526491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Original strand, 33673016 - 33673130
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttga 149  Q
    ||||||||||||||| ||||||| ||||  |||||  || ||||||| | |||| ||| ||||| ||||||||  ||||| ||| |||||||| || | |    
T  33673016 cttatgtataagctacttctatagcaaaggataaaataacttaaattatatttgtataagctataagctgtttccataagctatattggagaatttataa 33673115  T
Q  150 aaataagttgaaaac 164  Q
    ||| ||| |||||||    
T  33673116 aaacaagctgaaaac 33673130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 40009408 - 40009466
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcata 107  Q
    |||||||||||||| ||| |||||||||| | ||| |||||||||||||||||| ||||    
T  40009408 cttatgtataagctgtttttataacaaaagacaaaataaagttaaattgtttttccata 40009466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 42656451 - 42656517
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctat 113  Q
    ||||||| ||||||||||||||||||||||| || ||||||||| ||||  |||||| ||| |||||    
T  42656451 cacttatatataagctatttctataacaaaagataaaataaagtcaaatcatttttgtataagctat 42656517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 48507667 - 48507740
Alignment:
Q  58 taagctatttctataacaaaaaataa--ataaagttaaattgtttttgcatatgctattagctgttttaataag 129  Q
    |||||| |||||||| ||||| ||||  || ||||||||||||||||| ||||||||| | ||||||| |||||    
T  48507667 taagctgtttctatagcaaaagataagaatgaagttaaattgtttttgtatatgctataaactgttttcataag 48507740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 2894758 - 2894807
Alignment:
Q  53 atgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||| ||||| ||||||| || ||||||    
T  2894758 atgtataagctatttctataacaaaagataaattaaagttgaactgtttt 2894807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 4970913 - 4970819
Alignment:
Q  57 ataagctatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataa 155  Q
    |||||||||||||||| ||||| |||||  ||    ||||||||||| ||||||||| || | |||| ||||||||| || ||||| || |||||||||    
T  4970913 ataagctatttctatagcaaaagataaaataa----aattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaaaataa 4970819  T

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Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 164
Target Start/End: Complemental strand, 22283862 - 22283761
Alignment:
Q  63 tatttctataacaaaaaataaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaa 162  Q
    |||||||||| |||| |  |||||||||||||||||||||| ||  ||||| | ||||||| ||||   ||||| ||||| || || ||||||| |||||    
T  22283862 tatttctatagcaaagataaaataaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatggaaataagctgaaa 22283763  T
Q  163 ac 164  Q
    ||    
T  22283762 ac 22283761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 28178910 - 28178959
Alignment:
Q  53 atgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||||||||| || ||||||||| | ||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtcatattgtttt 28178959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 28702699 - 28702732
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  28702699 ttatgtataagctatttctataacaaaagataaa 28702732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 33871202 - 33871271
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagct 118  Q
    |||||||||||||||||||||| | |||| || |||| ||||| ||||| ||||| ||||||||| ||||    
T  33871202 cttatgtataagctatttctattataaaatataaaattaagttgaattggttttgtatatgctataagct 33871271  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 35809035 - 35809002
Alignment:
Q  51 ttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||||||||||||||||||| |||||    
T  35809035 ttatgtataagctatttctataacaaaagataaa 35809002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 45264066 - 45264107
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgtttt 123  Q
    |||||||||||||||||||||| ||||||||| |||| ||||    
T  45264066 aaataaagttaaattgtttttgtatatgctataagctatttt 45264107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 8960759 - 8960699
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatg 109  Q
    |||||||||| |||||| ||||| ||||  ||||| ||||||||||||||||||| |||||    
T  8960759 cttatgtatatgctattcctatagcaaatgataaaataaagttaaattgtttttgtatatg 8960699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 19022709 - 19022605
Alignment:
Q  58 taagctatttctataacaaaaaataaataaagtt-aaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||||||| | |||| |||||  || || ||||||||||   | ||||||| || |||||| ||||| ||| |||||||| || ||||||||||    
T  19022709 taagctatttctatcataaaagataaaagaactttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataag 19022610  T
Q  157 ttgaa 161  Q
    |||||    
T  19022609 ttgaa 19022605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 40689107 - 40689011
Alignment:
Q  61 gctatttctataacaaaaaataaa-taaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||||||| ||||| ||||| |||||||||||| ||||   ||| ||||| |||||| || ||||| |||| |||| || || ||||||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataag 40689011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 44989743 - 44989703
Alignment:
Q  116 gctgttttaataagatatcttggagaaattttgaaaataag 156  Q
    |||||||| ||||||||||||| ||||||| ||||||||||    
T  44989743 gctgttttcataagatatcttgtagaaattatgaaaataag 44989703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 45593851 - 45593799
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||||||||||| |||||||| || ||||||||| ||| ||||||    
T  45593851 cttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgtttt 45593799  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 155
Target Start/End: Complemental strand, 21412 - 21311
Alignment:
Q  48 cacttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattt 146  Q
    |||||||||||||||||||| ||||  |||| || |||||||||||||||||||| |       ||| ||||||||| ||||| ||| |||||||||||     
T  21412 cacttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcg-------tataagctgttttcataagctatattggagaaatta 21320  T
Q  147 tgaaaataa 155  Q
    |||||||||    
T  21319 tgaaaataa 21311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 27514 - 27566
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaat-aaataaagttaaattgtttt 101  Q
    |||||||||||| ||||||||||||| || || ||||||||| ||||||||||    
T  27514 cttatgtataagttatttctataacagaagataaaataaagtcaaattgtttt 27566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 6769 - 6717
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    ||||||||||| ||||||||||||||||||||||| | |||| ||||||||||    
T  6769 cttatgtataaactatttctataacaaaaaataaacttaagtcaaattgtttt 6717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 116688 - 116636
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    ||||||||||| ||||||||||||||||||||||| | |||| ||||||||||    
T  116688 cttatgtataaactatttctataacaaaaaataaacttaagtcaaattgtttt 116636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 1206 - 1172
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  1206 cttatgtataagctatttctataacaaaagataaa 1172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 9907 - 9873
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||| ||||||||||||||||||||||    
T  9907 cttatgtataagttatttctataacaaaaaataaa 9873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Original strand, 2769 - 2803
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    ||||||||||||||||||||||||||||| |||||    
T  2769 cttatgtataagctatttctataacaaaagataaa 2803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 51508 - 51558
Alignment:
Q  52 tatgtataagctatttctataacaaaaaataaa-taaagttaaattgtttt 101  Q
    |||||||||| ||||| |||||||||| ||||| |||||||||||||||||    
T  51508 tatgtataagttatttttataacaaaatataaaataaagttaaattgtttt 51558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 104266 - 104232
Alignment:
Q  50 cttatgtataagctatttctataacaaaaaataaa 84  Q
    |||||||||||| ||||||||||||||||||||||    
T  104266 cttatgtataagttatttctataacaaaaaataaa 104232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 178424 - 178342
Alignment:
Q  82 aaataaagttaaattgtttttgcatatgctattagctgttttaataagatatcttggagaaattttgaaaataagttgaaaac 164  Q
    ||||||||||||||| || | | ||| ||||||||||||||| | |||  ||||| ||||| || |||||||||| |||||||    
T  178424 aaataaagttaaattattgtcgtataagctattagctgttttcacaagccatctttgagaacttatgaaaataagctgaaaac 178342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 8307 - 8278
Alignment:
Q  49 acttatgtataagctatttctataacaaaa 78  Q
    ||||||||||||||||||||||||||||||    
T  8307 acttatgtataagctatttctataacaaaa 8278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 8231 - 8202
Alignment:
Q  49 acttatgtataagctatttctataacaaaa 78  Q
    ||||||||||||||||||||||||||||||    
T  8231 acttatgtataagctatttctataacaaaa 8202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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