View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3124_high_4 (Length: 253)
Name: NF3124_high_4
Description: NF3124
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3124_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 36329645 - 36329869
Alignment:
| Q |
13 |
cacagacaacatcaatnnnnnnngaatgctttgcaaacagaaatataacaatgtggttagtgcttattttatccttaaactccaaaagacacttgaaatt |
112 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36329645 |
cacagacaacatcaataaaaaaagaatgctttgcaaacagaaatataacaatgtggttagtgcttattttattcttaaactccaaaagacacttgaaatt |
36329744 |
T |
|
| Q |
113 |
tgaatacaggctaaaa-tctcaaaatacatttgaacttaaatttttcatattatgctagtcaagagggttatggcttgtctactacgtcatctcataatg |
211 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36329745 |
tgaatacaggctaaaaatctcaaaatacatttgaacttaaatttttcatattatgctagtcaagagggttatggcttgtctactacgtcatctcataatg |
36329844 |
T |
|
| Q |
212 |
tatcaagaatatatacatcactttt |
236 |
Q |
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||||||||||||||||||||||||| |
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| T |
36329845 |
tatcaagaatatatacatcactttt |
36329869 |
T |
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