View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3125R-Insertion-9 (Length: 245)
Name: NF3125R-Insertion-9
Description: NF3125R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3125R-Insertion-9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 9 - 245
Target Start/End: Original strand, 14401359 - 14401595
Alignment:
| Q |
9 |
aaaagctggtaatcaatatgtggaaaaagaaaattcaagggttgtgactaaatgaggttccctttgattgcatttggttgtctggttataaaatgaggat |
108 |
Q |
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| T |
14401359 |
aaaagctggtaatcaatatgtggaaaaagaaaattcaagggttgtgactaaatgaagttccctttgattgcatttggttgtctggttataaaatgaggat |
14401458 |
T |
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| Q |
109 |
gctctattgagagtctcacattagatctgatatggtttagaataatatttttgagtgagagacatccttcatcttataagatgctattatagggtcgagt |
208 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14401459 |
gctctattgagagtctcacattagatttgatatggtttagaataatatttttgagtgagagacatccttcatcttataagatgctattatagggtcgagt |
14401558 |
T |
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| Q |
209 |
taatcccaaccaaaattcgaagatagtatagtgtctt |
245 |
Q |
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||||| |||||||||||||||||||||||||| |||| |
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| T |
14401559 |
taatctcaaccaaaattcgaagatagtatagtatctt |
14401595 |
T |
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