View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3125_high_16 (Length: 247)
Name: NF3125_high_16
Description: NF3125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3125_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 20810926 - 20811154
Alignment:
| Q |
1 |
ctgcataaaggtacatcaacctaatcatcagctgttgtttggatacaacatttgctttgtatacatcataaataaacggtagatgtctaattaacttttc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20810926 |
ctgcataaaggtacatcaacctaatcatcagctgttgtttggatacaacatttgctttgtatacatcataaataaacggtagatgtctaattaacttttc |
20811025 |
T |
|
| Q |
101 |
gactttacctaccttgtgctttaattcagtcttcttggagataaagcaatcccaaattgaatttgaatcccatcaccaacctataaaccttttgaaatta |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20811026 |
gactttacctaccttgtgctttaattcagtcttcttggagataaagcaaccccaaattgaatttgaatcccatcaccaacctataaaccttttgaaatta |
20811125 |
T |
|
| Q |
201 |
gttttcacgctttttgcacatgtagtagt |
229 |
Q |
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||||||||||||||||||||||||||||| |
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|
| T |
20811126 |
gttttcacgctttttgcacatgtagtagt |
20811154 |
T |
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