View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3125_low_28 (Length: 225)
Name: NF3125_low_28
Description: NF3125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3125_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 36689333 - 36689166
Alignment:
| Q |
15 |
caaaggctgacattcactatcaatcgtaatttgcgcattgcaacatgaagggtggtagcttcgctttcagccgctgaagcctcaaattgaaatcatcatg |
114 |
Q |
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| T |
36689333 |
caaaggctgacattcactatcaatcgtagtttgcgcattgcaacatgaagggtggtagcttcggtttcagccgttgaagcctcaaattgaaatcatcatg |
36689234 |
T |
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| Q |
115 |
agtaagcatgaacaaattggccaaaattataacgaaagcgtacatcaatgccaaaacttccttttgtt |
182 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
36689233 |
agtaagcatgaacaaattggccaaaattatcacgaaagcgtacatcaatgccaaaacttccttttgtt |
36689166 |
T |
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