View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3126_high_4 (Length: 315)
Name: NF3126_high_4
Description: NF3126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3126_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 51806099 - 51805791
Alignment:
| Q |
1 |
cactttccggaaacttcccatcaactatttgctcttaccttccaaatttacgtgtcctaagcctcggtaatacaaaattcaagttcccaacaaacagcat |
100 |
Q |
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| T |
51806099 |
cactttccggaaacttcccgtcaaatatttgctcttaccttccaaatttacgtgtcctaaacctcggtaatacaaaattcaagttcccaacaaacagcat |
51806000 |
T |
|
| Q |
101 |
aatcaactgttctcacttagaacaactcaacatgaacaagatgcacctgtcaggaacacttcctgatttctcgtctttaaaatatctcagagtcctcgac |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51805999 |
aatcaactgttctcacttagaactactcaacatgaacaagatgcacctgtcaggaacacttcctgatttctcgtctttaaaatatctcagagtcctcgac |
51805900 |
T |
|
| Q |
201 |
ttatcatacaactccttcaccggcgattttcccatgtctgttttcaacctcaccaatcttgaaattctcaacttcaacgaaaacagtaaactcaatcttt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51805899 |
ttatcatacaactccttcaccggcgattttcccatgtctgttttcaacctcaccaatcttgaaattctcaacttcaacgaaaacagtaaactcaatcttt |
51805800 |
T |
|
| Q |
301 |
gggaattac |
309 |
Q |
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||||||||| |
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| T |
51805799 |
gggaattac |
51805791 |
T |
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