View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3128-Insertion-17 (Length: 328)
Name: NF3128-Insertion-17
Description: NF3128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3128-Insertion-17 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 7 - 328
Target Start/End: Complemental strand, 1769570 - 1769249
Alignment:
| Q |
7 |
ataacacattatctggtccaataccccaaaacataggcaacatgaaccaattagaagcatttagtctacaaggaaacaaattcacaggaccaattcctag |
106 |
Q |
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| T |
1769570 |
ataacacattatctggtccaataccccaaaacataggcagcatgaaccaattagaagcatttagtctacaagaaaacaaattcacaggaccaattcctag |
1769471 |
T |
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| Q |
107 |
ttcaatatctgcattgactaaagtaactcagttaaaactaggtaacaattttctcacaggaaccattccagtatcccttaaaaacctaacaaatctcaca |
206 |
Q |
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| T |
1769470 |
ttcaatatctgcattgactaaattaactcagttaaaactaggtaacaattttctcacaggaaccattccagtatcccttaaaaacctaacaaatctcaca |
1769371 |
T |
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| Q |
207 |
taccttagtctccaaggaaaccaacttagtggtaacatacctgatattttcacttccttaaaaaaccttattattctcgaactttctcacaacaaatttt |
306 |
Q |
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| T |
1769370 |
taccttagtctccaaggaaaccaacttagtggtaacatacctgatattttcacttccttaaaaaaccttattattctccaactttctcacaacaaatttt |
1769271 |
T |
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| Q |
307 |
ccgggaatattccactttcaat |
328 |
Q |
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| T |
1769270 |
ccgggaatattccactttcaat |
1769249 |
T |
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