View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3128_high_46 (Length: 224)
Name: NF3128_high_46
Description: NF3128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3128_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 32169546 - 32169354
Alignment:
| Q |
18 |
gttaaaatatactccacgttagattaagacgcctctttcattcaatagatcgatttttatttaacccgaaactttttactcacacttaacacatcgatat |
117 |
Q |
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| T |
32169546 |
gttaaaatatacttcacgttagattaagacgcctctttcattcaataggtcgatttttatttaacctaagattttttactcacacttaacacaccgatac |
32169447 |
T |
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| Q |
118 |
tagatgagaattttcagactaagtcgttttagttttgatacgactacaatggctattgcaatgcaatcgtcaaagacgcctaaactccctttg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32169446 |
tagatgagaattttcagactaagtcgttttagttttgatacgactataatggctattgcaatgcaatcgtcaaagacgtctaaactccctttg |
32169354 |
T |
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