View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3128_low_32 (Length: 268)
Name: NF3128_low_32
Description: NF3128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3128_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 5996172 - 5996274
Alignment:
| Q |
12 |
aagaaataattaagcactctttaatttgttgtttaattaagcaaatttgattctctgcatgttgaataaattgacatttaataattcaatcgtgggacac |
111 |
Q |
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| T |
5996172 |
aagaattaattaagcactctttaatttgttgtttaattaagcaaatttgattctctgcatgttgaataaattgacatttaataattcaatcgtgggacac |
5996271 |
T |
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| Q |
112 |
gag |
114 |
Q |
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||| |
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| T |
5996272 |
gag |
5996274 |
T |
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