View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3129_low_5 (Length: 298)
Name: NF3129_low_5
Description: NF3129
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3129_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 9 - 280
Target Start/End: Original strand, 38070472 - 38070743
Alignment:
| Q |
9 |
acatcatcaaatattagtattactaccaaaaaactatagactataggtatcattggattcatttttgagtgtgacagaaattgatttcagacatagaaaa |
108 |
Q |
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| T |
38070472 |
acatcatcaaatattgttattactaccaaaaaactatagactataggtatcattggattcatttttgagtgtgacagaaattgatttcagacatagaaaa |
38070571 |
T |
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| Q |
109 |
ttgattttaactgtttttgtactggaaaatttattttgacttgtccaaaaaattagttattttcagaaataaattatatactgtagtttggagttgaaat |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38070572 |
ttgattttaactgtttttgtactggaaaatttattttgacttgtccaaaaaattagttattttcagaaataaattatatactgtagtttggagttgaaat |
38070671 |
T |
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| Q |
209 |
tttcttttttgtcttgaattgctttgtgagtggtgtgagtggaccatacatttaaccaaatctacaatgtgg |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38070672 |
tttcttttttgtcttgaattgctttgtgagtggtgtgagtggaccatacatttaaccaaatctacaatgtgg |
38070743 |
T |
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