View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3131_high_16 (Length: 203)

Name: NF3131_high_16
Description: NF3131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3131_high_16
NF3131_high_16
[»] chr8 (32 HSPs)
chr8 (17-185)||(2518639-2518801)
chr8 (70-185)||(13171896-13172007)
chr8 (80-185)||(44681286-44681387)
chr8 (70-154)||(29520584-29520669)
chr8 (58-128)||(6510726-6510796)
chr8 (78-150)||(32043522-32043595)
chr8 (77-183)||(10080155-10080256)
chr8 (70-129)||(28300411-28300470)
chr8 (58-153)||(8879714-8879811)
chr8 (71-139)||(16252860-16252929)
chr8 (77-124)||(10824464-10824511)
chr8 (85-139)||(16705701-16705756)
chr8 (85-186)||(15853723-15853823)
chr8 (77-153)||(16351321-16351398)
chr8 (70-123)||(36143293-36143346)
chr8 (58-129)||(30783339-30783411)
chr8 (71-138)||(33511285-33511353)
chr8 (70-153)||(36395224-36395308)
chr8 (70-126)||(45512799-45512854)
chr8 (85-139)||(36069582-36069637)
chr8 (58-128)||(37077676-37077747)
chr8 (70-129)||(38667478-38667537)
chr8 (71-122)||(43732492-43732543)
chr8 (154-185)||(44373780-44373811)
chr8 (70-139)||(30456500-30456569)
chr8 (70-139)||(41972063-41972132)
chr8 (85-137)||(7103201-7103254)
chr8 (154-183)||(12611539-12611568)
chr8 (86-138)||(18474245-18474298)
chr8 (70-153)||(33666773-33666855)
chr8 (58-153)||(36565515-36565612)
chr8 (70-106)||(44681398-44681434)
[»] chr2 (22 HSPs)
chr2 (62-183)||(38434866-38434984)
chr2 (58-128)||(16097290-16097361)
chr2 (72-150)||(9556645-9556724)
chr2 (70-125)||(9647908-9647963)
chr2 (58-153)||(36183362-36183459)
chr2 (85-129)||(21834492-21834536)
chr2 (77-129)||(42092450-42092502)
chr2 (58-128)||(38429795-38429866)
chr2 (58-128)||(41763341-41763412)
chr2 (85-151)||(41858679-41858746)
chr2 (70-125)||(45077672-45077727)
chr2 (70-128)||(41779606-41779664)
chr2 (70-138)||(44411640-44411709)
chr2 (77-128)||(7825289-7825340)
chr2 (86-128)||(12734641-12734683)
chr2 (70-128)||(41779032-41779090)
chr2 (58-153)||(8180691-8180788)
chr2 (74-127)||(23714559-23714612)
chr2 (74-127)||(24102231-24102284)
chr2 (77-129)||(9579000-9579052)
chr2 (110-153)||(13241019-13241063)
chr2 (85-129)||(17581407-17581451)
[»] chr4 (34 HSPs)
chr4 (70-183)||(54470131-54470240)
chr4 (69-129)||(2588904-2588964)
chr4 (58-139)||(45185305-45185388)
chr4 (72-129)||(17668410-17668467)
chr4 (84-138)||(10208976-10209031)
chr4 (68-129)||(17666341-17666402)
chr4 (77-137)||(20105761-20105822)
chr4 (71-127)||(17900405-17900461)
chr4 (58-128)||(35690215-35690286)
chr4 (58-153)||(12494661-12494758)
chr4 (58-153)||(31960088-31960185)
chr4 (85-137)||(34233323-34233376)
chr4 (87-128)||(50662330-50662371)
chr4 (88-183)||(51252710-51252799)
chr4 (70-153)||(56375214-56375298)
chr4 (70-129)||(21106908-21106967)
chr4 (58-128)||(23906601-23906672)
chr4 (58-128)||(43433829-43433900)
chr4 (58-128)||(45205148-45205219)
chr4 (70-129)||(45423543-45423602)
chr4 (58-128)||(48622841-48622912)
chr4 (70-128)||(1777315-1777373)
chr4 (70-129)||(11389644-11389705)
chr4 (88-126)||(20998954-20998992)
chr4 (85-138)||(43070053-43070107)
chr4 (70-139)||(44667530-44667600)
chr4 (71-125)||(44860779-44860833)
chr4 (58-153)||(33191122-33191219)
chr4 (77-153)||(44047622-44047699)
chr4 (85-153)||(51841465-51841534)
chr4 (77-129)||(18966484-18966536)
chr4 (72-139)||(25967555-25967623)
chr4 (89-129)||(42618817-42618857)
chr4 (85-129)||(44360022-44360066)
[»] chr5 (23 HSPs)
chr5 (70-151)||(28186944-28187026)
chr5 (76-138)||(9234999-9235062)
chr5 (87-139)||(683980-684033)
chr5 (85-153)||(6888932-6889001)
chr5 (70-139)||(11002709-11002779)
chr5 (85-185)||(14667696-14667798)
chr5 (70-128)||(21952275-21952333)
chr5 (58-139)||(2075762-2075845)
chr5 (77-139)||(5305547-5305610)
chr5 (70-129)||(7678404-7678463)
chr5 (71-137)||(21093701-21093768)
chr5 (71-129)||(6368224-6368282)
chr5 (70-153)||(219727-219811)
chr5 (68-183)||(10082988-10083098)
chr5 (71-127)||(16134480-16134536)
chr5 (58-128)||(1287889-1287960)
chr5 (70-129)||(41110040-41110099)
chr5 (58-103)||(5848401-5848447)
chr5 (77-138)||(30588384-30588446)
chr5 (58-106)||(16347700-16347749)
chr5 (58-106)||(34272933-34272982)
chr5 (70-106)||(27998347-27998383)
chr5 (70-106)||(43558136-43558172)
[»] chr7 (28 HSPs)
chr7 (71-153)||(39811882-39811965)
chr7 (58-139)||(27021994-27022077)
chr7 (70-185)||(36136688-36136799)
chr7 (70-185)||(47848598-47848709)
chr7 (71-153)||(48736173-48736256)
chr7 (58-138)||(30200248-30200330)
chr7 (58-183)||(36514456-36514576)
chr7 (70-153)||(37617868-37617952)
chr7 (90-129)||(47796437-47796476)
chr7 (58-138)||(28542173-28542254)
chr7 (74-138)||(25826759-25826824)
chr7 (70-153)||(34869344-34869428)
chr7 (58-129)||(38606916-38606988)
chr7 (58-139)||(1740708-1740791)
chr7 (77-128)||(33072885-33072936)
chr7 (58-128)||(35906501-35906572)
chr7 (70-129)||(36102064-36102123)
chr7 (58-128)||(43281587-43281658)
chr7 (70-139)||(14593685-14593755)
chr7 (78-128)||(29653854-29653904)
chr7 (70-128)||(36651918-36651976)
chr7 (58-153)||(31005134-31005231)
chr7 (71-120)||(37595630-37595679)
chr7 (87-139)||(40139204-40139257)
chr7 (58-153)||(45836754-45836851)
chr7 (58-153)||(49029187-49029284)
chr7 (70-153)||(13859282-13859366)
chr7 (70-106)||(16013208-16013244)
[»] chr6 (19 HSPs)
chr6 (70-185)||(12134148-12134259)
chr6 (71-153)||(33083983-33084066)
chr6 (77-139)||(33998292-33998355)
chr6 (58-126)||(31818449-31818518)
chr6 (77-128)||(7513283-7513334)
chr6 (58-128)||(608070-608141)
chr6 (58-128)||(5258450-5258521)
chr6 (90-129)||(8364520-8364559)
chr6 (58-128)||(9706687-9706758)
chr6 (70-139)||(5129125-5129195)
chr6 (76-118)||(7150628-7150670)
chr6 (70-128)||(9594012-9594070)
chr6 (58-128)||(10100157-10100228)
chr6 (60-125)||(30031169-30031235)
chr6 (58-106)||(4948629-4948678)
chr6 (58-106)||(4955600-4955649)
chr6 (80-129)||(10617525-10617574)
chr6 (58-153)||(28085287-28085384)
chr6 (77-129)||(9568591-9568643)
[»] chr3 (24 HSPs)
chr3 (89-184)||(39600929-39601020)
chr3 (78-139)||(36820247-36820309)
chr3 (70-124)||(42510315-42510369)
chr3 (70-183)||(49841535-49841652)
chr3 (58-139)||(50621648-50621731)
chr3 (70-139)||(38054625-38054695)
chr3 (85-153)||(344985-345054)
chr3 (70-138)||(2341003-2341072)
chr3 (85-183)||(31337775-31337867)
chr3 (77-127)||(46431972-46432022)
chr3 (58-153)||(52138711-52138808)
chr3 (58-128)||(33272328-33272399)
chr3 (77-128)||(45236787-45236838)
chr3 (88-139)||(45289383-45289434)
chr3 (58-128)||(45728057-45728128)
chr3 (58-139)||(46568027-46568110)
chr3 (79-185)||(49503801-49503903)
chr3 (58-128)||(51448009-51448080)
chr3 (71-129)||(11663574-11663632)
chr3 (71-120)||(19676398-19676447)
chr3 (58-153)||(47233870-47233967)
chr3 (85-152)||(50249320-50249391)
chr3 (58-153)||(54278931-54279028)
chr3 (70-153)||(28245361-28245445)
[»] chr1 (29 HSPs)
chr1 (77-139)||(40920825-40920888)
chr1 (76-129)||(16273119-16273172)
chr1 (58-151)||(40419550-40419645)
chr1 (70-139)||(4379929-4379999)
chr1 (77-127)||(35672619-35672669)
chr1 (71-128)||(16822319-16822376)
chr1 (70-128)||(19936446-19936504)
chr1 (58-153)||(696180-696277)
chr1 (58-153)||(1210656-1210753)
chr1 (58-153)||(9592645-9592742)
chr1 (58-153)||(15085845-15085942)
chr1 (58-153)||(30202404-30202501)
chr1 (71-151)||(52442780-52442861)
chr1 (88-127)||(27703951-27703990)
chr1 (70-129)||(52633471-52633530)
chr1 (77-138)||(4590813-4590875)
chr1 (71-129)||(39422340-39422398)
chr1 (70-128)||(49347693-49347751)
chr1 (70-128)||(51441065-51441123)
chr1 (77-126)||(6641063-6641112)
chr1 (58-153)||(8391683-8391780)
chr1 (70-178)||(9509242-9509346)
chr1 (70-127)||(34827403-34827460)
chr1 (74-126)||(4781305-4781357)
chr1 (74-102)||(12230955-12230983)
chr1 (70-126)||(17143179-17143235)
chr1 (70-106)||(26016361-26016397)
chr1 (92-139)||(33561077-33561125)
chr1 (94-126)||(39140468-39140500)
[»] scaffold0018 (1 HSPs)
scaffold0018 (70-129)||(44170-44229)


Alignment Details
Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 2518801 - 2518639
Alignment:
Q  17 cagagagttgggcagtgaagaaccaatatgagnnnnnnnnntaagtgtagcgggatgagaatgttgcattggatgtgtggtaagactagatgagatagga 116  Q
    ||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2518801 cagagagttgggcagtgaagaaccaatatgagaaaaaaaa-taagtgtagcgggatgagaatgttgcattggatgtgtggtaagactagatgagatagga 2518703  T
Q  117 ttagaaatgacaaattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaat 185  Q
    |||||||||||||||||||||||||||||||||     ||||||| |||||||||||||||||||||||    
T  2518702 ttagaaatgacaaattagagagaaaattggggt-----agcacctcaagtagaaaagatggtggaaaat 2518639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 13172007 - 13171896
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 168  Q
    ||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||| | ||||||      |||||||| |||||    
T  13172007 gatgagaatgttgcattggatgtgtagtaagactagacgggataggattagaaatgacaagattagagagagagttgggg-----aagcacctatagtag 13171913  T
Q  169 aaaagatggtggaaaat 185  Q
    |||||||||||||||||    
T  13171912 aaaagatggtggaaaat 13171896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 44681387 - 44681286
Alignment:
Q  80 ttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggt 178  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||| | ||| ||     ||||||||| | |||||||||||||    
T  44681387 ttgcattggatgtgtggtaagactagacgagataagattagaaatgacaacattagagagacagttgtgg-----tagcacctataatagaaaagatggt 44681293  T
Q  179 ggaaaat 185  Q
    |||||||    
T  44681292 ggaaaat 44681286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 29520584 - 29520669
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcat 154  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| |  |||||||||| | ||||||| ||||    
T  29520584 gatgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaaatgataccattagagagagagttggggtggcat 29520669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 6510796 - 6510726
Alignment:
Q  58 taagtgtagcgggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||||||||  ||||||  ||||||  ||||||||||||||||||||| ||||||||||||||    
T  6510796 taagtgtagcgggatgatgatgttgtgttggataagtggtaagactagatgagatatgattagaaatgaca 6510726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 32043522 - 32043595
Alignment:
Q  78 tgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggta 150  Q
    |||||| |||||||||||||||||||||| | ||||| |||||||||||||| |||||||||| | ||||||||    
T  32043522 tgttgcgttggatgtgtggtaagactagacgggatagaattagaaatgacaacattagagagagagttggggta 32043595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 183
Target Start/End: Complemental strand, 10080256 - 10080155
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagat 175  Q
    ||||||| |||| ||| ||||||||||||| |||||| ||||||||||||||| |||||||||| | ||| ||||||||     || |||||||||||||    
T  10080256 atgttgcgttgggtgtttggtaagactagacgagataagattagaaatgacaacattagagagagagttgaggtagcat-----ct-aagtagaaaagat 10080163  T
Q  176 ggtggaaa 183  Q
    ||||||||    
T  10080162 ggtggaaa 10080155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 28300470 - 28300411
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||| ||||||  |||||||||| |||||||||||||||||| |||||||||||||||    
T  28300470 gatgaggatgttgtgttggatgtgtagtaagactagatgagataagattagaaatgacaa 28300411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 8879811 - 8879714
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||||| ||||||||||||||| | |||  ||||||||||| ||  |||||||||||| ||||||| ||||||||||| ||| |||| ||||    
T  8879811 taagtgtagcggagatgagaatgttgcacttgataagtggtaagactggactagataggattaggaatgacacaattagagagagaatgggggaagca 8879714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 16252860 - 16252929
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    ||||| ||||||  ||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||    
T  16252860 atgaggatgttgtgttggatgtgtggtaagattagatgagataaaattagaaatgacaacattagagaga 16252929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 10824511 - 10824464
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaat 124  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  10824511 atgttgcattggacgtgtggtaagactagatgggatatgattagaaat 10824464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 16705701 - 16705756
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  16705701 ttggttgtgtggtaagactagatgggatagaattagaaatgacaacattagagaga 16705756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 15853823 - 15853723
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaaattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaa 184  Q
    ||||||||||| |||||  | |||||||| |||||||||||| |||||||||| | | ||||||| |   |||||||| |||||||||||| ||| ||||    
T  15853823 ttggatgtgtgataagaagatatgagataagattagaaatgaaaaattagagatagagttggggt-gggcagcacctatagtagaaaagatcgtgaaaaa 15853725  T
Q  185 tg 186  Q
    ||    
T  15853724 tg 15853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 16351321 - 16351398
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 153  Q
    ||||||| |||||| ||||||||||||||| |  ||||  ||||||||||||| |||||||||| |||| ||||||||    
T  16351321 atgttgcgttggatatgtggtaagactagacggaatagagttagaaatgacaacattagagagagaattagggtagca 16351398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 36143293 - 36143346
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaa 123  Q
    |||||| ||||||  ||||  |||||||||||||||||||||||||||||||||    
T  36143293 gatgaggatgttgtgttggtcgtgtggtaagactagatgagataggattagaaa 36143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 30783411 - 30783339
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||||| || |||||| || |||| |||||| ||||| ||||||||||  ||||||||||||||||||||    
T  30783411 taagtgtagtggagatgaggatcttgcgttggatctgtggcaagactagataggataggattagaaatgacaa 30783339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 33511285 - 33511353
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||| |||||||  | ||||||||||||||||| |||||||| |||||||||||| || |||||||||    
T  33511285 atgaggatgttgcgcttgatgtgtggtaagactatatgagatatgattagaaatgaaaatattagagag 33511353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 36395308 - 36395224
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  36395308 gatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagca 36395224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 45512854 - 45512799
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatga 126  Q
    |||||||||||| | ||||||||||||||||||||||| || |||| ||||||||||    
T  45512854 gatgagaatgtttcgttggatgtgtggtaagactagat-aggtagggttagaaatga 45512799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 85 - 139
Target Start/End: Original strand, 36069582 - 36069637
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||||||||||||| | |||| ||||||||| ||||| ||||||||||    
T  36069582 ttggatgtgtggtaagactagacgggataagattagaaacgacaacattagagaga 36069637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 37077676 - 37077747
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    ||||||| |||| |||||| |||||||  |||||| ||||||| |||||| ||||||||||||| |||||||    
T  37077676 taagtgtggcggagatgaggatgttgcgctggatgagtggtaaaactagacgagataggattaggaatgaca 37077747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 38667478 - 38667537
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||| ||||||||  ||||| ||||||||| | |||||||||||||||||| ||||||||    
T  38667478 gatgggaatgttgtgttggacgtgtggtaaaagtagatgagataggattagtaatgacaa 38667537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 71 - 122
Target Start/End: Original strand, 43732492 - 43732543
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaa 122  Q
    ||||| ||||| | |||||||||||||||||||||||| ||||| |||||||    
T  43732492 atgaggatgttacgttggatgtgtggtaagactagatgtgatagaattagaa 43732543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 185
Target Start/End: Original strand, 44373780 - 44373811
Alignment:
Q  154 tagcacctaaagtagaaaagatggtggaaaat 185  Q
    ||||||||||||||||||||||||||||||||    
T  44373780 tagcacctaaagtagaaaagatggtggaaaat 44373811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 30456569 - 30456500
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagaga 139  Q
    |||||| ||||||| |||||||||||||||||| | ||| ||||| |||||||||||| | ||||||||||    
T  30456569 gatgaggatgttgcgttggatgtgtggtaagacca-atgggatagaattagaaatgacgacattagagaga 30456500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 41972132 - 41972063
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||| |||||| |||||||||||| ||||| || ||||||||| ||||||||||| || ||||||||||    
T  41972132 gatgaggatgttgtattggatgtgtgataagatta-atgagatagaattagaaatgagaatattagagaga 41972063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 137
Target Start/End: Original strand, 7103201 - 7103254
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagaga 137  Q
    |||||||||  |||| ||||||||||||||||||| ||||||||| ||||||||    
T  7103201 ttggatgtgctgtaaaactagatgagataggattataaatgacaacattagaga 7103254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 183
Target Start/End: Original strand, 12611539 - 12611568
Alignment:
Q  154 tagcacctaaagtagaaaagatggtggaaa 183  Q
    ||||||||||||||||||||||||||||||    
T  12611539 tagcacctaaagtagaaaagatggtggaaa 12611568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 18474298 - 18474245
Alignment:
Q  86 tggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||||||||||||| ||||||| ||||| | |||||||||||| |||||||||    
T  18474298 tggatgtgtggtaaggctagatgtgatagaaatagaaatgacaatattagagag 18474245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 33666855 - 33666773
Alignment:
Q  70 gatgagaatgttgcattggatgtgtgg-taagactagatgagataggattagaaatgacaaattagagagaaaattggggtagca 153  Q
    ||||||||| ||  ||||||||||||| |||| ||||||||||||||||||  ||||||  || ||||||| | |||||||||||    
T  33666855 gatgagaatattttattggatgtgtgggtaaggctagatgagataggattaagaatgac--ataagagagagagttggggtagca 33666773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 36565612 - 36565515
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||| ||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  36565612 taagtgtagcagagatgaggatgatgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagca 36565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 44681434 - 44681398
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||| |||||| |||||||||||||||||||||||    
T  44681434 gatgaggatgttgtattggatgtgtggtaagactaga 44681398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 38434866 - 38434984
Alignment:
Q  62 tgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcac 159  Q
    |||||||| |||||| ||||||||||||||| ||||||| |||||| |||| | ||||||||||||||| |||||||||| ||||||||     ||||||    
T  38434866 tgtagcggagatgaggatgttgcattggatgcgtggtaaaactagacgagagaagattagaaatgacaacattagagagagaattgggg-----tagcac 38434960  T
Q  160 ctaaagtagaaaagatggtggaaa 183  Q
    ||| ||||||||||||||||||||    
T  38434961 ctatagtagaaaagatggtggaaa 38434984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 16097361 - 16097290
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||| |||||| |||||||| |||||| |||||||||||||||| |||| ||||||||||||||    
T  16097361 taagtgtagcggagatgaggatgttgcactggatgagtggtaagactagatgggatatgattagaaatgaca 16097290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 9556724 - 9556645
Alignment:
Q  72 tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggta 150  Q
    |||| ||||||  ||||||||||||||||| |||| | |||| ||||||||||||||| |||||||||||| ||||||||    
T  9556724 tgaggatgttgtgttggatgtgtggtaagattagacgggatatgattagaaatgacaacattagagagaaagttggggta 9556645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 9647963 - 9647908
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatg 125  Q
    |||||| ||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  9647963 gatgaggatgttgcgttggatgtgtggtaagactagatgtgataagattagaaatg 9647908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 36183362 - 36183459
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| ||||||| ||||||||||| | | |||||||||    
T  36183362 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacacaattagagagagagtaggggtagca 36183459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 21834492 - 21834536
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||    
T  21834492 ttggatgtgtggtaagactagatgagataagattagaaattacaa 21834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 42092450 - 42092502
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||||||||||||||| ||||||||||| | |||| |||||||||||||||    
T  42092450 atgttgcattggatgtgtagtaagactagacgggatatgattagaaatgacaa 42092502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 38429795 - 38429866
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||| |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  38429795 taagtgtagcggagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgaca 38429866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 41763412 - 41763341
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||| |||||| |||||||  |||||| ||||||||||||||  |||||||||||| |||||||    
T  41763412 taagtgtagcggagatgaggatgttgcgatggatgagtggtaagactagacaagataggattaggaatgaca 41763341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 41858679 - 41858746
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 151  Q
    |||||||||||||||||||  ||||||   ||||||||||||||| |||||||||| |||||||||||    
T  41858679 ttggatgtgtggtaagactgtatgagacgtgattagaaatgacaacattagagagagaattggggtag 41858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 45077672 - 45077727
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatg 125  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||| ||||||||||    
T  45077672 gatgaggatgttgcgttggatgtgtggtaagactagactagatagaattagaaatg 45077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 41779664 - 41779606
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||||||||  ||||||| |||||||||  | |||||||||||||||||||    
T  41779664 gatgagaatgttgcattaaatgtgtgttaagactaggcgggataggattagaaatgaca 41779606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 44411640 - 44411709
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||| ||| |||| || ||||||| |||||||||||||||||| ||||| ||||||||| |||||||||    
T  44411640 gatgataatattgcgtttgatgtgttgtaagactagatgagatatgattacaaatgacaacattagagag 44411709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 7825289 - 7825340
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    ||||||| ||||||||||||||||||||||   |||| ||||||||||||||    
T  7825289 atgttgcgttggatgtgtggtaagactagactggatatgattagaaatgaca 7825340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 12734641 - 12734683
Alignment:
Q  86 tggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| |||||||||||||| | |||||||||||||||||||    
T  12734641 tggatgagtggtaagactagacgggataggattagaaatgaca 12734683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 41779090 - 41779032
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||||| ||||||||| |||||||||||  | ||||||  |||||||||||    
T  41779090 gatgagaatgttgcgttggatgtggggtaagactagtcgggatagggctagaaatgaca 41779032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 8180691 - 8180788
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||  ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  8180691 taagtgtagcagagatgaggatgttgtgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 8180788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 23714612 - 23714559
Alignment:
Q  74 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    |||||||||  ||||||||||||||||||||||  | ||||||||| |||||||    
T  23714612 agaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgac 23714559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 24102284 - 24102231
Alignment:
Q  74 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    |||||||||  ||||||||||||||||||||||  | ||||||||| |||||||    
T  24102284 agaatgttgtgttggatgtgtggtaagactagacaaaataggattaaaaatgac 24102231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 9579052 - 9579000
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||| ||||||||||||||||| |||||  ||||| |||| |||||||||    
T  9579052 atgttgcgttggatgtgtggtaagaatagatatgatagaattaaaaatgacaa 9579000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 13241063 - 13241019
Alignment:
Q  110 gataggattagaaatgacaa-attagagagaaaattggggtagca 153  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||    
T  13241063 gataggattagaaatgacaacattagagagagaattggagtagca 13241019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 17581407 - 17581451
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||||||||||||||||||||  |||| ||||| |||||||||    
T  17581407 ttggatgtgtggtaagactagatatgataagattaaaaatgacaa 17581451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 8e-23; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 54470131 - 54470240
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 168  Q
    |||||| |||||||||||||||||||||||||||||||| |||| |||| ||||| |||| |||||||||| | ||||||     ||||||||| |||||    
T  54470131 gatgaggatgttgcattggatgtgtggtaagactagatgggatatgatttgaaataacaacattagagagagagttgggg-----tagcacctatagtag 54470225  T
Q  169 aaaagatggtggaaa 183  Q
    |||||||||||||||    
T  54470226 aaaagatggtggaaa 54470240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 2588904 - 2588964
Alignment:
Q  69 ggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  2588904 ggatgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaaatgacaa 2588964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 45185388 - 45185305
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||| ||| ||||| |||  |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  45185388 taagtgtagcggtgataagaatattgtgttggatgtgtagtaagactagatgagatagaattagaaatgacaacattagagaga 45185305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 17668467 - 17668410
Alignment:
Q  72 tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||    
T  17668467 tgagaatgttgcgttggatgtgtggtaaaactagatgagataagattataaatgacaa 17668410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 10208976 - 10209031
Alignment:
Q  84 attggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  10208976 attggatgtgtggtaagactagatgggatagaattagaaatgacaacattagagag 10209031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 17666402 - 17666341
Alignment:
Q  68 gggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||| |||||||||||| |||||||||||| ||||||||||||| ||||| | |||||||    
T  17666402 gggatgtgaatgttgcatttgatgtgtggtaaaactagatgagataagattatatatgacaa 17666341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 20105822 - 20105761
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagaga 137  Q
    |||||||  ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||    
T  20105822 atgttgcgatggatgtgtggtaagactagacgagatatgattagaaatgacaacattagaga 20105761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 17900405 - 17900461
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  17900405 atgaggatgttgcgttggatgtgtggtaagactagatgggataaaattagaaatgac 17900461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 35690215 - 35690286
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||| ||||||| || ||||||||||| ||||||||||||| |||||||    
T  35690215 taagtgtagccgagatgaggatgttgcgttggatgagtagtaagactagacgagataggattaggaatgaca 35690286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 12494661 - 12494758
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  12494661 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 12494758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 31960185 - 31960088
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  31960185 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagca 31960088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 34233376 - 34233323
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagaga 137  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||    
T  34233376 ttggatgtgtgataagactagatgtgataggattagaaacgacaacattagaga 34233323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 50662330 - 50662371
Alignment:
Q  87 ggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  50662330 ggatgtgtggtaagactatatgagataggattggaaatgaca 50662371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 51252799 - 51252710
Alignment:
Q  88 gatgtgtggtaagactagatgagataggattagaaatgac-aaattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 183  Q
    ||||||| ||||||||||| |||||||||||||||||||| | |||||||||  | ||||||     ||||||||  ||||||||||||||||||||    
T  51252799 gatgtgtcgtaagactagacgagataggattagaaatgactacattagagag--agttgggg-----tagcacctctagtagaaaagatggtggaaa 51252710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 56375214 - 56375298
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||| ||||||| ||||||| ||||||||||||||  ||||| |||||| |||||||  |||||||||| | | |||||||||    
T  56375214 gatgaggatgttgcgttggatgagtggtaagactagacaagataagattaggaatgacaccattagagagagagtaggggtagca 56375298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 21106908 - 21106967
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||| ||||||  || ||||||||||||||||||| | ||||| ||||||||||||||    
T  21106908 gatgaggatgttgggttcgatgtgtggtaagactagacgtgatagaattagaaatgacaa 21106967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 23906672 - 23906601
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||| ||||||| |||| |||||||||  |||||||||||| |||||||    
T  23906672 taagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgaca 23906601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 43433829 - 43433900
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||| ||||||| |||| |||||||||  |||||||||||| |||||||    
T  43433829 taagtgtagcagagatgaggatgttgcgttggatgagtggcaagactagacaagataggattaggaatgaca 43433900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 45205219 - 45205148
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||| ||||||| |||||| ||||||  ||||||| |||||||||||||| | ||||||||||| |||||||    
T  45205219 taagcgtagcggagatgaggatgttgtgttggatgagtggtaagactagacgggataggattaggaatgaca 45205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 45423543 - 45423602
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||| ||||||  |||| ||||||||||||||||| | ||||| ||||||||||||||    
T  45423543 gatgaggatgttgtgttggttgtgtggtaagactagacgggatagaattagaaatgacaa 45423602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 48622912 - 48622841
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  48622912 taagtgtagcagagatgaggatgttgctttggatgagtggtaagactagacatgataggattaggaatgaca 48622841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 1777373 - 1777315
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  1777373 gatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgaca 1777315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 11389644 - 11389705
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactaga--tgagataggattagaaatgacaa 129  Q
    |||||| |||||| |||||||||||||||| ||||||   || |||||||||||||||||||    
T  11389644 gatgaggatgttggattggatgtgtggtaaaactagacgggatataggattagaaatgacaa 11389705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 20998954 - 20998992
Alignment:
Q  88 gatgtgtggtaagactagatgagataggattagaaatga 126  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  20998954 gatgtgttgtaagactagacgagataggattagaaatga 20998992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 43070107 - 43070053
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||||||||||||||| ||||   |||||||||||||||||||| |||||||||    
T  43070107 ttggatgtgtggtaagattagacaggataggattagaaatgacaacattagagag 43070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 44667600 - 44667530
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||||| |||||| || ||||| ||||||  |||||| ||||||| |||||| ||||||||||    
T  44667600 gatgagaatgttgcgttggatatgcggtaatactagacaagatagtattagaagtgacaatattagagaga 44667530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 44860779 - 44860833
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatg 125  Q
    ||||| ||||||  ||||||||||||||||||||||||  ||| |||||||||||    
T  44860779 atgaggatgttgtgttggatgtgtggtaagactagatggaataagattagaaatg 44860833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 33191219 - 33191122
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| |||||||  |||||| ||||||||| |||||  ||||||||||| |||||||  |||||||||| | | |||||||||    
T  33191219 taagtgtagcagagatgaggatgttgcgctggatgagtggtaagattagataggataggattaggaatgacaccattagagagagagtgggggtagca 33191122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 44047699 - 44047622
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 153  Q
    ||||||||||| ||| |||||| || |||  | ||||| |||||||||||||| |||||||||| | |||||||||||    
T  44047699 atgttgcattgaatgcgtggtaggattaggcgggatagaattagaaatgacaacattagagagagagttggggtagca 44047622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 51841534 - 51841465
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 153  Q
    ||||||||||||||||||||||  |||||| ||  |||| ||||| |||||||||| |||||||| ||||    
T  51841534 ttggatgtgtggtaagactagacaagatagaatatgaaacgacaatattagagagagaattggggcagca 51841465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 18966484 - 18966536
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||| ||||||||||||||||| ||||  | ||||||||| |||||||||    
T  18966484 atgttgcgttggatgtgtggtaagattagacaaaataggattataaatgacaa 18966536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 25967623 - 25967555
Alignment:
Q  72 tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagaga 139  Q
    |||| |||||||  |||||||||||||||||||||   | |||||||||||||||| | ||||||||||    
T  25967623 tgaggatgttgcgatggatgtgtggtaagactagacatggtaggattagaaatgactacattagagaga 25967555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 42618817 - 42618857
Alignment:
Q  89 atgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||||| |||||||||  |||||||||||||||||||||    
T  42618817 atgtgtgggaagactagacaagataggattagaaatgacaa 42618857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 44360022 - 44360066
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||||||||||| ||||||  ||||||| ||||||||||||||    
T  44360022 ttggatgtgtggtaggactaggcgagatagaattagaaatgacaa 44360066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 151
Target Start/End: Complemental strand, 28187026 - 28186944
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 151  Q
    |||||||||||||||||||||||||||||||||||||   | |||||||||||||||||| |||||||||||  |||||||||    
T  28187026 gatgagaatgttgcattggatgtgtggtaagactagacatggtaggattagaaatgacaacattagagagaaggttggggtag 28186944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 9234999 - 9235062
Alignment:
Q  76 aatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  9234999 aatgttgcattggatgtgtggtaagactagacgggataggattataaatgacaacattagagag 9235062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 684033 - 683980
Alignment:
Q  87 ggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  684033 ggatgtgtggtaagactagatgagatagaattagaaatgacaatattagagaga 683980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 6888932 - 6889001
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 153  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||| | | |||||||||||    
T  6888932 ttggatgtgtggtaagactagatgagatatgattagaaatgacaatattacagaaagagttggggtagca 6889001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 11002779 - 11002709
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||| |||||||  ||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  11002779 gatgaggatgttgcgctggatgtgtggtaagacgagatgggatagaattagaaatgacaacattagagaga 11002709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 14667696 - 14667798
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga-aaattggggtagcatagcacctaaagtagaaaagatggtggaa 182  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||| | |  | | | |  ||||||||| |||||||||||||||||||    
T  14667696 ttggatgtgtgataagactagatgaggtagaattagaaatgacaatattagagagagagagagagttggggtagcacctatagtagaaaagatggtggaa 14667795  T
Q  183 aat 185  Q
    |||    
T  14667796 aat 14667798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 21952275 - 21952333
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| ||||||| ||| |||||||||||||||||| |||||| ||||||||||||||    
T  21952275 gatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaaatgaca 21952333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 2075845 - 2075762
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||| | |||||| ||||||| ||||||| || |||||||||||  |||||||||||| |||||||| ||||||||||    
T  2075845 taagtgtagcagagatgaggatgttgcgttggatgagttgtaagactagacaagataggattaggaatgacaacattagagaga 2075762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 5305547 - 5305610
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    ||||||| ||||||||||||||||||||||  |||||| ||||||||| |||| ||||||||||    
T  5305547 atgttgcgttggatgtgtggtaagactagacaagatagaattagaaataacaacattagagaga 5305610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 7678404 - 7678463
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||| ||||||| |||||| ||||| ||||||||||  ||||||||||||||||||||    
T  7678404 gatgaggatgttgcgttggatctgtggcaagactagataggataggattagaaatgacaa 7678463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 21093701 - 21093768
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagaga 137  Q
    ||||| ||||||| ||| |||||||||||||||||||| ||| | |||||||||||||| ||||||||    
T  21093701 atgaggatgttgcgttgtatgtgtggtaagactagatgtgatggaattagaaatgacaatattagaga 21093768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 6368282 - 6368224
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||| ||||||| || |||||||||||||| |||| ||||||| ||||||||||||||    
T  6368282 atgaggatgttgcgttagatgtgtggtaagaatagacgagatagaattagaaatgacaa 6368224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 219811 - 219727
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 153  Q
    |||||||||||||| ||||||| ||| |||||| ||| |||||| |||||  |||||||| ||| |||||| | |||||||||||    
T  219811 gatgagaatgttgcgttggatgcgtgttaagacaagacgagataagattacgaatgacaacattggagagagagttggggtagca 219727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 10083098 - 10082988
Alignment:
Q  68 gggatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagt 166  Q
    |||||||| ||||||| ||| |||||||||||||||||| | ||||| ||||||||||| || ||||| ||||  |||||||     || |||||| |||    
T  10083098 gggatgaggatgttgctttg-atgtgtggtaagactagacgggatagaattagaaatgagaacattagggagagcattgggg-----tatcacctatagt 10083005  T
Q  167 agaaaagatggtggaaa 183  Q
    |||||||||||| ||||    
T  10083004 agaaaagatggtagaaa 10082988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 127
Target Start/End: Complemental strand, 16134536 - 16134480
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    ||||| ||||||  |||||||| ||||||||||||||||||||  ||||||||||||    
T  16134536 atgaggatgttgtgttggatgtatggtaagactagatgagataaaattagaaatgac 16134480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 1287960 - 1287889
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  1287960 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgaca 1287889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 41110099 - 41110040
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||| ||||||||  ||||||||| || ||||||||||  |||||||||||||||||||    
T  41110099 gatgaaaatgttgcgctggatgtgtagtgagactagatggaataggattagaaatgacaa 41110040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 5848447 - 5848401
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagact 103  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||    
T  5848447 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 5848401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 30588384 - 30588446
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||||| | |||||||||||||||  | |||||||| ||||||||||||||| |||||||||    
T  30588384 atgttgcgtgggatgtgtggtaagatcaaatgagatatgattagaaatgacaatattagagag 30588446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 16347749 - 16347700
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||||||||| |||||| ||||||| ||||||| ||||||||||||||    
T  16347749 taagtgtagcggagatgaggatgttgcgttggatgagtggtaagactaga 16347700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 34272933 - 34272982
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||||||| | |||||| ||||||||||||||| ||||||||||||||    
T  34272933 taagtgtagcagagatgaggatgttgcattggatgagtggtaagactaga 34272982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 27998347 - 27998383
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  27998347 gatgaggatgttgcgttggatgtgtggtaagactaga 27998383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 43558172 - 43558136
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  43558172 gatgaggatgttgcgttggatgtgtggtaagactaga 43558136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 39811882 - 39811965
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagca 153  Q
    ||||| ||||||| |||||||||||||||||||||| | |||||||||||||||||||| |||||||||| | |||||| ||||    
T  39811882 atgaggatgttgctttggatgtgtggtaagactagacgtgataggattagaaatgacaacattagagagagagttggggcagca 39811965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 27022077 - 27021994
Alignment:
Q  58 taagtgtagcggga-tgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||   |||||||||| ||||||||| ||||||||||    
T  27022077 taagtgtagcggcaatgagaatgttgcattggatgtgtgataagactagacaggataggattaaaaatgacaacattagagaga 27021994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 36136688 - 36136799
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 168  Q
    |||||||||||||  ||||||| |||||||||||||| | |||||| |||| |||||||  |||||||||| | ||||||     ||||||||| |||||    
T  36136688 gatgagaatgttgtgttggatgggtggtaagactagaagggataggtttaggaatgacaccattagagagagagttgggg-----tagcacctatagtag 36136782  T
Q  169 aaaagatggtggaaaat 185  Q
    |||||||||| ||||||    
T  36136783 aaaagatggtagaaaat 36136799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 47848598 - 47848709
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 168  Q
    |||||| ||||||  |||||||||||||||||||||| | |||||||| |||| ||| || |||||||||| | ||||||||||      |||| |||||    
T  47848598 gatgaggatgttgtgttggatgtgtggtaagactagacgggataggatcagaagtgataacattagagagagagttggggtagcg-----cctatagtag 47848692  T
Q  169 aaaagatggtggaaaat 185  Q
    |||||||||||||||||    
T  47848693 aaaagatggtggaaaat 47848709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 71 - 153
Target Start/End: Complemental strand, 48736256 - 48736173
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagagaaaattggggtagca 153  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||  |||||||||||| | |||| ||||| | |||||||||||    
T  48736256 atgaggatgttgcgttgaatgtgtggtaagactagatgagataaaattagaaatgacgacattatagagagagttggggtagca 48736173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 30200330 - 30200248
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    |||||||||| | |||||| ||||||  ||||||||||||||||| |||||| |||| ||||||||||||||| |||||||||    
T  30200330 taagtgtagcagagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaaatgacaacattagagag 30200248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 183
Target Start/End: Complemental strand, 36514576 - 36514456
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcata 155  Q
    |||||||||| | |||||| ||||||| |||||||||||||||||||| | | ||||| |||||||| ||||| |||||||||  | ||||||     ||    
T  36514576 taagtgtagcagagatgaggatgttgcgttggatgtgtggtaagactaaacgggatagaattagaaaggacaacattagagag--agttgggg-----ta 36514484  T
Q  156 gcacctaaagtagaaaagatggtggaaa 183  Q
    ||||||| ||||||||||||||| ||||    
T  36514483 gcacctatagtagaaaagatggtagaaa 36514456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 37617868 - 37617952
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||| ||||||| ||||||| ||||||||||||||  |||||||||||| |||||||  |||||||||| | | |||||||||    
T  37617868 gatgaggatgttgcgttggatgagtggtaagactagacaagataggattaggaatgacaccattagagagagagtgggggtagca 37617952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 47796476 - 47796437
Alignment:
Q  90 tgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  47796476 tgtgtggtaagactagatgggataggattagaaatgacaa 47796437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 28542254 - 28542173
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    |||||||||||| ||||||  |||||| ||||||||||||||||||||| || ||||| |||||||||| ||| |||||||||    
T  28542254 taagtgtagcggagatgagggtgttgcgttggatgtgtggtaagactag-tgggatagaattagaaatggcaatattagagag 28542173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 25826824 - 25826759
Alignment:
Q  74 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||||||| ||||||| ||||||||||| | | ||||||||||||||||||| || |||||||||    
T  25826824 agaatgttgtattggatatgtggtaagaccatacgagataggattagaaatgaaaacattagagag 25826759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 34869344 - 34869428
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  34869344 gatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 34869428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 38606916 - 38606988
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||||||||| ||||| ||||||||  |||||| ||||||||||||||   ||||||||||| ||||||||    
T  38606916 taagtgtagcggagatgataatgttgcgctggatgagtggtaagactagacatgataggattaggaatgacaa 38606988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 1740708 - 1740791
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||| | |||||| ||||||| |||||||||| |||||||||| || | || |||||||||||| || ||||||||||    
T  1740708 taagtgtagcagagatgaggatgttgcgttggatgtgtagtaagactaggtggggtaagattagaaatgagaacattagagaga 1740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 33072885 - 33072936
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    ||||||| ||||||| ||||||||||||||  |||||||||||| |||||||    
T  33072885 atgttgcgttggatgagtggtaagactagacaagataggattaggaatgaca 33072936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 35906572 - 35906501
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  35906572 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgaca 35906501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 36102123 - 36102064
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||| |||||||  || ||||||||||||||||||||| |||  |||||||||||||||    
T  36102123 gatgaaaatgttgagttcgatgtgtggtaagactagatgggatgagattagaaatgacaa 36102064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 43281587 - 43281658
Alignment:
Q  58 taagtgtagcggg-atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    ||||||||||||| ||||| |||||||  |||||| ||||||||||||||  | |||||||||| |||||||    
T  43281587 taagtgtagcggggatgaggatgttgcgctggatgagtggtaagactagacaatataggattaggaatgaca 43281658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 14593685 - 14593755
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||| ||||||| |||||||||||||||||||||| |  |  | |||||||||||||| ||||||||||    
T  14593685 gatgaggatgttgcgttggatgtgtggtaagactagacggaaccgaattagaaatgacaacattagagaga 14593755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 29653904 - 29653854
Alignment:
Q  78 tgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| ||||||||||||||| |||||| | ||||| |||||||||||||    
T  29653904 tgttgcgttggatgtgtggtaacactagacgggatagaattagaaatgaca 29653854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 36651918 - 36651976
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  36651918 gatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgaca 36651976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 31005134 - 31005231
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| ||| |||  |||||||||| | | |||||||||    
T  31005134 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaataacaccattagagagagagtgggggtagca 31005231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 37595630 - 37595679
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattag 120  Q
    ||||||||||||||||| || ||| |||||||||||  ||||||||||||    
T  37595630 atgagaatgttgcattgaatatgtagtaagactagacaagataggattag 37595679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 40139257 - 40139204
Alignment:
Q  87 ggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||||||||||| | |||| ||||||||| ||||| ||||||||||    
T  40139257 ggatgtgtggtaagactagacgggataagattagaaaagacaacattagagaga 40139204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 45836851 - 45836754
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||| ||||| |||||| |||||||  |||||| ||||||||| ||||  |||||||||||| |||||||  |||||||||| | | |||||||||    
T  45836851 taagtgcagcggagatgaggatgttgcgctggatgagtggtaagagtagacaagataggattaggaatgacaccattagagagagagtgggggtagca 45836754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 49029187 - 49029284
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||| | ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  49029187 taagtgtagcagagatgaggatgttacgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 49029284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 13859366 - 13859282
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||| ||||||| ||||| | ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  13859366 gatgaggatgttgcgttggacgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 13859282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 16013208 - 16013244
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  16013208 gatgaggatgttgcgttggatgtgtggtaagactaga 16013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 8e-17; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 70 - 185
Target Start/End: Complemental strand, 12134259 - 12134148
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtag 168  Q
    |||||||||||||  |||||||||||| ||||| |||||| |||| |||||||||||||| |||||||||| ||||| ||     ||  ||||| |||||    
T  12134259 gatgagaatgttgtgttggatgtgtggcaagacaagatgatatagaattagaaatgacaatattagagagagaattgagg-----tacgacctatagtag 12134165  T
Q  169 aaaagatggtggaaaat 185  Q
    |||||||||||||||||    
T  12134164 aaaagatggtggaaaat 12134148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 33083983 - 33084066
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagagaaaattggggtagca 153  Q
    ||||| ||| ||| |||||||||||||||||||||||| ||||| |||||||||||| | |||||||||| | |||||||||||    
T  33083983 atgaggatgctgcgttggatgtgtggtaagactagatgggatagaattagaaatgacgatattagagagagagttggggtagca 33084066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 33998355 - 33998292
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagaga 139  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  33998355 atgttgcgttggatgtgtggtaagactagatgtgataggattagaaatgactacattagagaga 33998292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 126
Target Start/End: Original strand, 31818449 - 31818518
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatga 126  Q
    |||||||||| | ||||||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||    
T  31818449 taagtgtagcagagatgagaatgttgcattggatatgtgttaagattagatgagataagattagaaatga 31818518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 7513334 - 7513283
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  7513334 atgttgcgttggatgtgtggtaagactagatgagataagatttgaaatgaca 7513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 608070 - 608141
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||| |||||| ||||| | ||||||| |||||||||||||||  ||||||||||| |||||||    
T  608070 taagtgtagcggagatgaggatgttccgttggatgagtggtaagactagataggataggattaggaatgaca 608141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 5258521 - 5258450
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||| | |||||||||||| ||||||| ||||||||||||||  |||||||||||  |||||||    
T  5258521 taagtgtagcggaggtgagaatgttgcgttggatgagtggtaagactagacaagataggattatgaatgaca 5258450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 8364520 - 8364559
Alignment:
Q  90 tgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8364520 tgtgtggtaagactagatgggataggattagaaatgacaa 8364559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 9706687 - 9706758
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||| |||||| |||||||| |||||| ||||||||||||||   ||||||||||| |||||||    
T  9706687 taagtgtagcggagatgaggatgttgcactggatgagtggtaagactagacatgataggattaggaatgaca 9706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 5129195 - 5129125
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||| ||||||| ||| ||||||||||||| | |||| ||| |||||||||||||||| ||||||||||    
T  5129195 gatgaggatgttgcgttgaatgtgtggtaagattcgatgtgatcggattagaaatgacaatattagagaga 5129125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 118
Target Start/End: Complemental strand, 7150670 - 7150628
Alignment:
Q  76 aatgttgcattggatgtgtggtaagactagatgagataggatt 118  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  7150670 aatgttgctttggatgtgtggtaagactagacgagataggatt 7150628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 9594070 - 9594012
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| ||||||| ||||||| |||||||||||||| | ||||||||||| |||||||    
T  9594070 gatgaggatgttgcgttggatgagtggtaagactagacgggataggattaggaatgaca 9594012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 10100228 - 10100157
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||| |||||| ||||||| || |||| ||||||||||||||  | ||| ||||||||||||||    
T  10100228 taagtgtagcggagatgaggatgttgcgttagatgagtggtaagactagacaatatatgattagaaatgaca 10100157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 30031169 - 30031235
Alignment:
Q  60 agtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatg 125  Q
    |||||||||| ||||||  |||||  ||||||| |||||||||||||| | ||||||||||||||||    
T  30031169 agtgtagcggagatgaggttgttgtgttggatgagtggtaagactagacgggataggattagaaatg 30031235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 4948678 - 4948629
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||||||||| ||| || ||||||| ||||||||||||||||||||||    
T  4948678 taagtgtagcggagattaggatgttgctttggatgtgtggtaagactaga 4948629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 4955649 - 4955600
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||||||||| ||| || ||||||| ||||||||||||||||||||||    
T  4955649 taagtgtagcggagattaggatgttgctttggatgtgtggtaagactaga 4955600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 10617574 - 10617525
Alignment:
Q  80 ttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||| ||||||||||| |||||||||| || |||| ||||||||||||||    
T  10617574 ttgcgttggatgtgtgttaagactagacgaaatagaattagaaatgacaa 10617525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 28085287 - 28085384
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||  |||||||  |||||||||| | | |||||||||    
T  28085287 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattacgaatgacaccattagagagagagtgggggtagca 28085384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 9568591 - 9568643
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||| ||||||||||||||||||||||   ||||| |||| |||||||||    
T  9568591 atgttgcgttggatgtgtggtaagactagacatgatagaattataaatgacaa 9568643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 89 - 184
Target Start/End: Complemental strand, 39601020 - 39600929
Alignment:
Q  89 atgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaaa 184  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||||| | ||||||||| |     |||| |||||||||||||||||||||    
T  39601020 atgtgtggtaagactagatgggataagattagaaatgacaacattagagagagagttggggtagta-----cctatagtagaaaagatggtggaaaa 39600929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 36820309 - 36820247
Alignment:
Q  78 tgttgcattggatgtgtggtaagactagatgagataggattagaaatgac-aaattagagaga 139  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  36820309 tgttgcgttggatgtgtggtaagactagacgagataggattagaaatgacgacattagagaga 36820247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 42510369 - 42510315
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaat 124  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  42510369 gatgaggatgttgcattggatgtgtggtaagactagatgggataggtttagaaat 42510315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 183
Target Start/End: Original strand, 49841535 - 49841652
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-atta--gagagaaaattggggtag-catagcacctaaag 165  Q
    |||||| ||||||  |||||||||| ||||||||||| ||| || ||||||||||||||| ||||  |||||| | ||||||||| | ||||||||| |     
T  49841535 gatgaggatgttgtgttggatgtgtagtaagactagacgaggtaagattagaaatgacaacattagtgagagagagttggggtagccgtagcacctatat 49841634  T
Q  166 tagaaaagatggtggaaa 183  Q
    ||||||||||||||||||    
T  49841635 tagaaaagatggtggaaa 49841652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 50621731 - 50621648
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||| ||||||||||||||||| ||| |||||||||||||     |||||||||||||||||||| ||||||||||    
T  50621731 taagtgtagcggagatgagaatgttgcatttgatatgtggtaagactatgaatgataggattagaaatgacaacattagagaga 50621648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 38054695 - 38054625
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||||||| ||| ||| |||||||||||||| | ||||||||||||||||| || ||||||||||    
T  38054695 gatgagaatgttgcgttgaatgggtggtaagactagacgggataggattagaaatgataacattagagaga 38054625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 345054 - 344985
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatga-caaattagagagaaaattggggtagca 153  Q
    |||||| ||||||||||||||| |||||||||||||||||||  | |||||||||| | |||||||||||    
T  345054 ttggatttgtggtaagactagacgagataggattagaaatgatgacattagagagagagttggggtagca 344985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 2341072 - 2341003
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    |||||| ||||||||||||||||||||||||||||||   ||||| ||||||||||| || |||||||||    
T  2341072 gatgaggatgttgcattggatgtgtggtaagactagacatgatagaattagaaatgaaaacattagagag 2341003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 31337867 - 31337775
Alignment:
Q  85 ttggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagatggtggaaa 183  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||  |||||||||||| |||||      ||||||||| ||||||||||||||| ||||    
T  31337867 ttggatgtgtgataagactagatgggataggatta-aaatgacagcattagagagaaagttggg------tagcacctatagtagaaaagatggttgaaa 31337775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 46432022 - 46431972
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  46432022 atgttgcattggatgtgtggtaagactagacaggatagggttagaaatgac 46431972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 52138711 - 52138808
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  52138711 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 52138808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 33272399 - 33272328
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||||||||||| ||||||||||||||   ||||||||||  |||||||    
T  33272399 taagtgtagcagagatgaggatgttgcattggatgagtggtaagactagacatgataggattaagaatgaca 33272328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 45236787 - 45236838
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    ||||||| ||||||||||||||||||||||   |||| ||||||||||||||    
T  45236787 atgttgcgttggatgtgtggtaagactagactggatatgattagaaatgaca 45236838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 45289434 - 45289383
Alignment:
Q  88 gatgtgtggtaagactagatgagataggattagaaatgacaaattagagaga 139  Q
    |||||||| |||||||||| | |||| |||||||||||||| ||||||||||    
T  45289434 gatgtgtgataagactagacgggataagattagaaatgacacattagagaga 45289383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Original strand, 45728057 - 45728128
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| |||||||  |||||| |||||||||| ||| || ||||||||||||||||||    
T  45728057 taagtgtagcagagatgaggatgttgcgctggatgagtggtaagacgagacgaaataggattagaaatgaca 45728128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 46568027 - 46568110
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||||||| | |||||| ||||||  ||||||||||| ||||||||||  |||| | |||||||||||||| ||||||||||    
T  46568027 taagtgtagcagagatgaggatgttgtgttggatgtgtgttaagactagaccagattgaattagaaatgacaacattagagaga 46568110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 79 - 185
Target Start/End: Complemental strand, 49503903 - 49503801
Alignment:
Q  79 gttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtagaaaagatgg 177  Q
    |||| |||||||| |||||||||||||| ||||||||||| | |||||||  |||||||||| | ||  ||     ||||||||| ||||||||||||||    
T  49503903 gttggattggatgagtggtaagactagacgagataggattgggaatgacaccattagagagagagttcagg-----tagcacctatagtagaaaagatgg 49503809  T
Q  178 tggaaaat 185  Q
    | ||||||    
T  49503808 tagaaaat 49503801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 51448080 - 51448009
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  51448080 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgaca 51448009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 11663574 - 11663632
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||| |||| || ||||||||||||||||| | |||||||||| |||||| |||||||    
T  11663574 atgaggatgtcgcgttggatgtgtggtaagattcgatgagatagaattagatatgacaa 11663632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 19676447 - 19676398
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattag 120  Q
    ||||| ||||||||||||||| | |||||||||||||| |||| ||||||    
T  19676447 atgaggatgttgcattggatgagcggtaagactagatgggataagattag 19676398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 47233967 - 47233870
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||||  |||||| || |||| ||||||| ||||||||||||||   |||| ||||||||||||||  |||||||||| ||| | |||||||    
T  47233967 taagtgtagcgaagatgaggatattgcgttggatgagtggtaagactagacatgataagattagaaatgacaccattagagagagaatggaggtagca 47233870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 152
Target Start/End: Original strand, 50249320 - 50249391
Alignment:
Q  85 ttggatgtgtggtaagactagatgagatag---gattagaaatgacaa-attagagagaaaattggggtagc 152  Q
    |||||||||||||| ||||||| |||||||   |||||||||||| || |||||||||| | ||||||||||    
T  50249320 ttggatgtgtggtaggactagacgagataggatgattagaaatgataacattagagagagagttggggtagc 50249391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 54278931 - 54279028
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||  ||||||||||||||  |||||| ||||| |||||||  |||||||||| | | |||||||||    
T  54278931 taagtgtagcagagatgaggatgttgcgttggataagtggtaagactagacaagatagaattaggaatgacaccattagagagagagtaggggtagca 54279028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 28245361 - 28245445
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||| ||||||| ||||||| |||||||||||||    ||||||||||| |||||||  |||||||||| | | |||||||||    
T  28245361 gatgaggatgttgcgttggatgagtggtaagactagcctggataggattaggaatgacatcattagagagagagtgggggtagca 28245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 40920888 - 40920825
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||    
T  40920888 atgttgcattggatgtgtggtaagattagacgagataggattagaaattacaatattagagaga 40920825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 16273172 - 16273119
Alignment:
Q  76 aatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  16273172 aatgttgcgttggatgtgtggtaagactagatgagatgagattagaaatgacaa 16273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 40419550 - 40419645
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 151  Q
    |||||||||| | |||||| ||| ||| ||| |||| |||||| |||||||||||||| |||||||||||||| |||||||||| | |||||||||    
T  40419550 taagtgtagcagagatgaggatggtgcgttgaatgtatggtaaaactagatgagatagaattagaaatgacaacattagagagagagttggggtag 40419645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 4379929 - 4379999
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    |||||| ||||||  ||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  4379929 gatgaggatgttgtgttggatgtgtggtaagactagaaaagatatgattagaaatgacaacattagagaga 4379999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 35672619 - 35672669
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  35672619 atgttgcatttaatgtgtggtaaaactagatgagataggattagaaatgac 35672669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 16822376 - 16822319
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    ||||| ||||||  ||||||||||||||| ||||||| ||||||||||||||||||||    
T  16822376 atgaggatgttgtgttggatgtgtggtaatactagataagataggattagaaatgaca 16822319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 19936446 - 19936504
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||||||||||  ||||||| |||||||||||||||| ||||||| ||| |||||||    
T  19936446 gatgagaatgttgtgttggatgagtggtaagactagatgggataggaataggaatgaca 19936504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 696180 - 696277
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||||| |||||| |||||||  |||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  696180 taagtgtagcggagatgaggatgttgcgctggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagca 696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 1210656 - 1210753
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  1210656 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgacaccattagagagagagtgggggtagca 1210753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 9592645 - 9592742
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  9592645 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 9592742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 15085845 - 15085942
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||||| |||||| |||||||  |||| | |||||||||||||||  ||||||||||| |||||||  |||||||||| | | |||||||||    
T  15085845 taagtgtagcggagatgaggatgttgcgctggacgagtggtaagactagataggataggattaggaatgacaccattagagagagagtgggggtagca 15085942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 30202501 - 30202404
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||| | |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||  |||||||||| | | |||||||||    
T  30202501 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacatgataggattaggaatgacaccattagagagagagtgggggtagca 30202404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 52442861 - 52442780
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagagaaaattggggtag 151  Q
    ||||| ||||||  ||||||||||||||||||||||  ||||| |||||||||||| || ||| |||||| | |||||||||    
T  52442861 atgaggatgttgtgttggatgtgtggtaagactagacaagataagattagaaatgagaacattggagagagagttggggtag 52442780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 27703951 - 27703990
Alignment:
Q  88 gatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  27703951 gatgtgtggtaagacttgatgagataagattagaaatgac 27703990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 52633530 - 52633471
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||| ||||||| ||| ||||| |||||||||||||| |||| || ||||||||||||    
T  52633530 gatgaggatgttgcgttgaatgtgcggtaagactagatgtgataagactagaaatgacaa 52633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 4590875 - 4590813
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa-attagagag 138  Q
    ||||||| ||| ||||| ||| ||||||||  ||||||||||||||||||||| |||||||||    
T  4590875 atgttgcgttgaatgtgcggtgagactagacaagataggattagaaatgacaatattagagag 4590813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 129
Target Start/End: Complemental strand, 39422398 - 39422340
Alignment:
Q  71 atgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    ||||||||||||  || ||||||||||| || || ||||||||| ||||||||||||||    
T  39422398 atgagaatgttgtgttagatgtgtggtaggattatatgagatagaattagaaatgacaa 39422340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 49347751 - 49347693
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| ||||||| ||||||| ||||||||||||||   ||||||||||| |||||||    
T  49347751 gatgaggatgttgcgttggatgagtggtaagactagacaggataggattaggaatgaca 49347693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 51441123 - 51441065
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca 128  Q
    |||||| ||||||||||||| | ||||||||||||||   ||||||||||| |||||||    
T  51441123 gatgaggatgttgcattggacgagtggtaagactagacatgataggattaggaatgaca 51441065  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 6641063 - 6641112
Alignment:
Q  77 atgttgcattggatgtgtggtaagactagatgagataggattagaaatga 126  Q
    ||||||| |||||||||||||| |||||||||  |||| |||||||||||    
T  6641063 atgttgcgttggatgtgtggtatgactagatggcatagaattagaaatga 6641112  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 8391683 - 8391780
Alignment:
Q  58 taagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagca 153  Q
    |||||||||||| |||||  ||||||  ||||||| |||||||||||| |  |||||||||||| |||||||  |||||||||| | | |||||||||    
T  8391683 taagtgtagcggagatgaagatgttgtgttggatgagtggtaagactacacaagataggattaggaatgacaccattagagagagagtgggggtagca 8391780  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 9509242 - 9509346
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgaca-aattagagagaaaattggggtagcatagcacctaaagtag 168  Q
    |||||| ||||||  ||||||| ||| ||||||||||   |||| ||||||||||||||  |||||||||| | ||||||     ||||||||| |||||    
T  9509242 gatgaggatgttgtgttggatgagtgataagactagacaggatatgattagaaatgacaccattagagagagagttgggg-----tagcacctatagtag 9509336  T
Q  169 aaaagatggt 178  Q
    ||||||||||    
T  9509337 aaaagatggt 9509346  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 34827460 - 34827403
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgac 127  Q
    |||||| ||||||  ||||||| |||||||||||||| || ||| |||||||||||||    
T  34827460 gatgaggatgttgtgttggatgagtggtaagactagacgatataagattagaaatgac 34827403  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 4781305 - 4781357
Alignment:
Q  74 agaatgttgcattggatgtgtggtaagactagatgagataggattagaaatga 126  Q
    |||||||| || ||||||||||| || ||||||||||| |||||||| |||||    
T  4781305 agaatgttacaatggatgtgtggaaatactagatgagacaggattaggaatga 4781357  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 102
Target Start/End: Original strand, 12230955 - 12230983
Alignment:
Q  74 agaatgttgcattggatgtgtggtaagac 102  Q
    |||||||||||||||||||||||||||||    
T  12230955 agaatgttgcattggatgtgtggtaagac 12230983  T

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Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 17143235 - 17143179
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatga 126  Q
    |||||||||||||||||||||||| | ||||||||||   | ||| |||||||||||    
T  17143235 gatgagaatgttgcattggatgtgcgctaagactagacatggtagaattagaaatga 17143179  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 26016361 - 26016397
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactaga 106  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  26016361 gatgaggatgttgcgttggatgtgtggtaagactaga 26016397  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Complemental strand, 33561125 - 33561077
Alignment:
Q  92 tgtggtaagactagatgagataggattagaaatgacaa-attagagaga 139  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||||||||    
T  33561125 tgtggtaagactaaatgggataggattggaaatgacaacattagagaga 33561077  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Original strand, 39140468 - 39140500
Alignment:
Q  94 tggtaagactagatgagataggattagaaatga 126  Q
    ||||||||||||||||||||||||||| |||||    
T  39140468 tggtaagactagatgagataggattaggaatga 39140500  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 44229 - 44170
Alignment:
Q  70 gatgagaatgttgcattggatgtgtggtaagactagatgagataggattagaaatgacaa 129  Q
    |||||| ||||||| ||||||||| ||||||||||||||  |||| |||| |||||||||    
T  44229 gatgaggatgttgcgttggatgtgcggtaagactagatggtatagtattaaaaatgacaa 44170  T

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