View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3131_high_2 (Length: 582)

Name: NF3131_high_2
Description: NF3131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3131_high_2
NF3131_high_2
[»] chr1 (34 HSPs)
chr1 (14-566)||(14260165-14260720)
chr1 (403-468)||(12274587-12274652)
chr1 (466-506)||(40043184-40043224)
chr1 (464-512)||(41573290-41573338)
chr1 (460-515)||(28661483-28661538)
chr1 (465-515)||(37013981-37014031)
chr1 (465-515)||(52267757-52267807)
chr1 (464-512)||(43840346-43840394)
chr1 (464-516)||(44801503-44801555)
chr1 (460-515)||(10990715-10990770)
chr1 (465-516)||(22336159-22336210)
chr1 (464-515)||(29935975-29936026)
chr1 (465-512)||(30678834-30678881)
chr1 (473-515)||(2889944-2889986)
chr1 (465-515)||(3431323-3431373)
chr1 (465-515)||(5279388-5279438)
chr1 (465-515)||(7803398-7803448)
chr1 (473-515)||(19396209-19396251)
chr1 (465-515)||(35199085-35199134)
chr1 (465-515)||(41763173-41763223)
chr1 (465-515)||(52043266-52043316)
chr1 (473-514)||(619427-619468)
chr1 (466-515)||(3321485-3321534)
chr1 (463-512)||(13261162-13261211)
chr1 (466-515)||(21400041-21400090)
chr1 (466-515)||(29233992-29234041)
chr1 (464-501)||(34083672-34083709)
chr1 (466-515)||(37098499-37098548)
chr1 (464-512)||(24529677-24529725)
chr1 (467-515)||(28016208-28016256)
chr1 (460-500)||(36672747-36672787)
chr1 (474-514)||(37185684-37185724)
chr1 (464-500)||(44365981-44366017)
chr1 (472-516)||(52262183-52262227)
[»] chr8 (35 HSPs)
chr8 (464-515)||(7553671-7553722)
chr8 (462-515)||(13575279-13575332)
chr8 (466-515)||(6447183-6447232)
chr8 (478-515)||(26799190-26799227)
chr8 (467-515)||(9656015-9656063)
chr8 (464-512)||(26886063-26886111)
chr8 (459-515)||(29499758-29499814)
chr8 (463-515)||(33987748-33987800)
chr8 (452-515)||(8984512-8984574)
chr8 (464-511)||(14303157-14303204)
chr8 (473-516)||(27134437-27134480)
chr8 (464-515)||(32555246-32555297)
chr8 (473-515)||(3672634-3672676)
chr8 (473-515)||(4600296-4600338)
chr8 (465-511)||(8687859-8687905)
chr8 (473-515)||(13004166-13004208)
chr8 (473-515)||(13105095-13105137)
chr8 (473-515)||(14279589-14279631)
chr8 (473-515)||(15079170-15079212)
chr8 (465-515)||(39821877-39821927)
chr8 (462-516)||(40399971-40400025)
chr8 (466-515)||(11708980-11709029)
chr8 (466-515)||(13357459-13357508)
chr8 (474-511)||(33377815-33377852)
chr8 (466-515)||(34438398-34438447)
chr8 (465-514)||(42200681-42200730)
chr8 (471-515)||(989595-989639)
chr8 (464-512)||(1230682-1230730)
chr8 (467-515)||(8717493-8717541)
chr8 (467-515)||(10152451-10152499)
chr8 (479-515)||(24023830-24023866)
chr8 (464-512)||(31511963-31512011)
chr8 (479-515)||(32944858-32944894)
chr8 (464-516)||(37938487-37938539)
chr8 (475-515)||(43778022-43778062)
[»] chr3 (36 HSPs)
chr3 (464-515)||(7738661-7738712)
chr3 (464-515)||(27397630-27397681)
chr3 (465-515)||(8127456-8127506)
chr3 (465-515)||(51250251-51250301)
chr3 (466-515)||(33771684-33771733)
chr3 (464-515)||(334865-334917)
chr3 (467-515)||(46226095-46226143)
chr3 (464-515)||(9598431-9598482)
chr3 (473-516)||(21967557-21967600)
chr3 (473-516)||(21989993-21990036)
chr3 (464-515)||(32484270-32484321)
chr3 (465-516)||(48924336-48924387)
chr3 (464-515)||(51505865-51505916)
chr3 (465-515)||(1757687-1757737)
chr3 (466-512)||(7464512-7464558)
chr3 (465-515)||(7757076-7757126)
chr3 (473-515)||(10922326-10922368)
chr3 (473-515)||(12976620-12976662)
chr3 (465-515)||(21506776-21506826)
chr3 (473-515)||(35126287-35126329)
chr3 (473-515)||(36431810-36431852)
chr3 (473-515)||(42401433-42401475)
chr3 (465-515)||(44579629-44579679)
chr3 (463-512)||(7827499-7827548)
chr3 (463-512)||(7829887-7829936)
chr3 (466-515)||(18870743-18870792)
chr3 (466-515)||(21914089-21914138)
chr3 (466-515)||(28244122-28244171)
chr3 (466-515)||(29631180-29631229)
chr3 (466-515)||(40520746-40520795)
chr3 (466-515)||(47943292-47943341)
chr3 (463-515)||(5186824-5186876)
chr3 (467-515)||(25340942-25340990)
chr3 (471-511)||(39869829-39869869)
chr3 (482-514)||(45647316-45647348)
chr3 (474-514)||(48234472-48234512)
[»] chr7 (38 HSPs)
chr7 (463-517)||(32062014-32062068)
chr7 (466-515)||(44454506-44454555)
chr7 (464-515)||(48103692-48103743)
chr7 (466-516)||(23198766-23198816)
chr7 (473-515)||(36428149-36428191)
chr7 (466-512)||(40187657-40187703)
chr7 (465-515)||(46675899-46675949)
chr7 (466-515)||(6579612-6579661)
chr7 (466-515)||(21993176-21993225)
chr7 (473-514)||(29461840-29461881)
chr7 (466-518)||(18378396-18378448)
chr7 (464-512)||(22267573-22267621)
chr7 (463-515)||(27993047-27993099)
chr7 (463-515)||(43681008-43681060)
chr7 (464-507)||(19036442-19036485)
chr7 (464-515)||(19416506-19416557)
chr7 (464-507)||(20718151-20718194)
chr7 (464-515)||(36032924-36032975)
chr7 (465-515)||(1399155-1399205)
chr7 (465-515)||(10025987-10026037)
chr7 (473-515)||(18505675-18505717)
chr7 (473-515)||(19599146-19599188)
chr7 (465-515)||(20576428-20576478)
chr7 (473-515)||(21136832-21136874)
chr7 (465-515)||(34773224-34773274)
chr7 (463-501)||(43173178-43173216)
chr7 (462-515)||(4905266-4905319)
chr7 (463-512)||(24839479-24839528)
chr7 (466-515)||(35103490-35103539)
chr7 (463-516)||(40658713-40658766)
chr7 (466-515)||(47342452-47342501)
chr7 (462-515)||(47589571-47589624)
chr7 (463-515)||(8883544-8883596)
chr7 (467-515)||(9819567-9819615)
chr7 (467-515)||(10721492-10721540)
chr7 (472-516)||(25226617-25226661)
chr7 (472-516)||(25236449-25236493)
chr7 (463-515)||(47342668-47342720)
[»] scaffold1160 (1 HSPs)
scaffold1160 (475-515)||(1730-1770)
[»] chr6 (17 HSPs)
chr6 (464-515)||(12735261-12735312)
chr6 (465-515)||(21296751-21296801)
chr6 (462-515)||(24373728-24373781)
chr6 (464-515)||(4922426-4922477)
chr6 (473-515)||(2108726-2108768)
chr6 (466-512)||(7281419-7281465)
chr6 (465-515)||(9444950-9445000)
chr6 (482-516)||(26489965-26489999)
chr6 (473-515)||(28757042-28757084)
chr6 (466-515)||(331904-331953)
chr6 (466-515)||(28363493-28363542)
chr6 (478-515)||(29283821-29283858)
chr6 (467-516)||(30358311-30358360)
chr6 (463-515)||(866303-866355)
chr6 (482-514)||(6555534-6555566)
chr6 (463-515)||(12333586-12333638)
chr6 (467-515)||(17382079-17382127)
[»] chr5 (36 HSPs)
chr5 (464-515)||(781855-781906)
chr5 (465-515)||(11637590-11637640)
chr5 (465-515)||(33645707-33645757)
chr5 (473-515)||(33995791-33995833)
chr5 (467-516)||(17861974-17862023)
chr5 (466-511)||(37054291-37054336)
chr5 (464-515)||(436585-436636)
chr5 (464-515)||(22555223-22555274)
chr5 (465-512)||(28447486-28447533)
chr5 (472-515)||(36271040-36271083)
chr5 (466-512)||(3156528-3156574)
chr5 (465-515)||(6489000-6489050)
chr5 (466-516)||(8350664-8350714)
chr5 (473-515)||(11720895-11720937)
chr5 (461-515)||(18391589-18391643)
chr5 (461-515)||(18789025-18789079)
chr5 (465-515)||(20175820-20175870)
chr5 (465-515)||(25509304-25509354)
chr5 (465-515)||(28207125-28207175)
chr5 (477-515)||(32622900-32622938)
chr5 (473-515)||(33654749-33654791)
chr5 (465-515)||(34436844-34436894)
chr5 (465-515)||(35270699-35270749)
chr5 (465-515)||(40445976-40446026)
chr5 (465-515)||(40837921-40837971)
chr5 (466-515)||(5485180-5485229)
chr5 (466-515)||(5551299-5551348)
chr5 (466-515)||(15889405-15889454)
chr5 (466-515)||(34191427-34191476)
chr5 (475-516)||(41344579-41344620)
chr5 (479-515)||(866045-866081)
chr5 (464-512)||(1512847-1512895)
chr5 (464-516)||(5998937-5998989)
chr5 (467-515)||(16701599-16701647)
chr5 (459-511)||(29178434-29178486)
chr5 (463-511)||(32131624-32131672)
[»] chr4 (43 HSPs)
chr4 (464-515)||(48171873-48171924)
chr4 (465-515)||(20096288-20096338)
chr4 (473-515)||(30380531-30380573)
chr4 (473-515)||(48067134-48067176)
chr4 (463-515)||(7248327-7248379)
chr4 (464-516)||(54151642-54151694)
chr4 (464-515)||(10303529-10303580)
chr4 (464-515)||(12671766-12671817)
chr4 (464-515)||(13276121-13276172)
chr4 (465-512)||(43722758-43722805)
chr4 (470-512)||(897423-897465)
chr4 (465-515)||(7030911-7030961)
chr4 (465-515)||(11949781-11949831)
chr4 (466-516)||(14577524-14577574)
chr4 (465-515)||(21318271-21318321)
chr4 (465-515)||(50362157-50362207)
chr4 (465-515)||(51002280-51002330)
chr4 (465-515)||(53261478-53261528)
chr4 (473-515)||(56204948-56204990)
chr4 (462-515)||(2649751-2649804)
chr4 (466-515)||(9946421-9946470)
chr4 (466-507)||(15976022-15976063)
chr4 (466-515)||(20799412-20799461)
chr4 (464-501)||(26927056-26927093)
chr4 (466-515)||(27537742-27537791)
chr4 (462-511)||(30780119-30780168)
chr4 (462-515)||(31041383-31041436)
chr4 (470-515)||(32737753-32737798)
chr4 (466-511)||(36662391-36662436)
chr4 (466-515)||(37725739-37725788)
chr4 (466-515)||(41520948-41520997)
chr4 (466-515)||(43034360-43034409)
chr4 (463-516)||(44918230-44918283)
chr4 (478-515)||(49579961-49579998)
chr4 (464-512)||(5185120-5185168)
chr4 (463-515)||(17423195-17423247)
chr4 (465-501)||(20043224-20043260)
chr4 (464-512)||(21465603-21465651)
chr4 (467-511)||(23626376-23626420)
chr4 (467-515)||(23775513-23775561)
chr4 (467-515)||(24885818-24885866)
chr4 (478-506)||(26610189-26610217)
chr4 (465-517)||(51286445-51286497)
[»] chr2 (35 HSPs)
chr2 (464-515)||(3197097-3197148)
chr2 (464-515)||(17779010-17779061)
chr2 (473-515)||(41859853-41859895)
chr2 (466-515)||(6723095-6723144)
chr2 (466-515)||(9842220-9842269)
chr2 (477-518)||(14925247-14925288)
chr2 (466-515)||(16221364-16221413)
chr2 (462-515)||(27935046-27935099)
chr2 (466-506)||(11817373-11817413)
chr2 (453-513)||(12757109-12757169)
chr2 (463-515)||(28874570-28874622)
chr2 (466-506)||(42778613-42778653)
chr2 (464-515)||(21482537-21482588)
chr2 (464-515)||(45032685-45032736)
chr2 (473-515)||(19189862-19189904)
chr2 (465-515)||(22267506-22267556)
chr2 (461-511)||(22558966-22559016)
chr2 (465-515)||(26400744-26400794)
chr2 (473-515)||(31815905-31815947)
chr2 (473-515)||(38603982-38604024)
chr2 (466-515)||(2256965-2257014)
chr2 (466-515)||(11560492-11560541)
chr2 (466-511)||(29798539-29798584)
chr2 (466-515)||(34977198-34977247)
chr2 (462-511)||(40257174-40257223)
chr2 (466-519)||(40365420-40365473)
chr2 (471-499)||(3169755-3169783)
chr2 (463-515)||(12124536-12124588)
chr2 (473-517)||(13922648-13922692)
chr2 (473-517)||(27314868-27314912)
chr2 (478-506)||(34117450-34117478)
chr2 (468-512)||(34191329-34191373)
chr2 (483-515)||(37413197-37413229)
chr2 (463-515)||(42475128-42475180)
chr2 (464-516)||(43424651-43424703)
[»] scaffold0045 (2 HSPs)
scaffold0045 (466-516)||(63856-63906)
scaffold0045 (466-516)||(71188-71238)
[»] scaffold0154 (1 HSPs)
scaffold0154 (463-515)||(10775-10827)
[»] scaffold0050 (1 HSPs)
scaffold0050 (467-515)||(53398-53446)
[»] scaffold0011 (1 HSPs)
scaffold0011 (463-515)||(185254-185306)
[»] scaffold0040 (1 HSPs)
scaffold0040 (464-515)||(56776-56827)
[»] scaffold0021 (1 HSPs)
scaffold0021 (473-515)||(161142-161184)
[»] scaffold0008 (1 HSPs)
scaffold0008 (465-515)||(119562-119612)
[»] scaffold0005 (1 HSPs)
scaffold0005 (466-516)||(239801-239851)
[»] scaffold0262 (1 HSPs)
scaffold0262 (466-515)||(15948-15997)
[»] scaffold0352 (1 HSPs)
scaffold0352 (463-515)||(12647-12699)


Alignment Details
Target: chr1 (Bit Score: 490; Significance: 0; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 490; E-Value: 0
Query Start/End: Original strand, 14 - 566
Target Start/End: Complemental strand, 14260720 - 14260165
Alignment:
Q  14 tccaaggaaggaaattaagaaatttggtgaatacatgttttattttgtttataaaaagaggtaaaacaacnnnnnnntgccacttttattcaatcattta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |    
T  14260720 tccaaggaaggaaattaagaaatttggtgaatacatgttttattttgtttataaaaagaggtaaaacaacaaaata-tgccacttttattcaatcattaa 14260622  T
Q  114 tgaaaatgatttaaaaactgcaattaggaactcttaacagtacattttatatctagtgattactattacaagtggagtggttccactgattgacattcac 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14260621 tgaaaatgatttaaaaactgcaattaggaactcttaacagtacattttatatctagtgattactattacaagtggagtggttccactgattgacattcac 14260522  T
Q  214 gttagcaggagaatgatgaaggacttggtgattcggctgggatgaattggcacctgcaactcgatcagcatggatgatcaactttttcagcattgtgaat 313  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14260521 gttagcaggagaatgatcaaggacttggtgattcggctgggatgaattggcacctgcaactcgatcagcatggatgatcaactttttcagcattgtgaat 14260422  T
Q  314 acctctattgacagaggtcaccctataaaacttgggcttaagcagaagattcgcagtaaccagaacaacactcaaacacgtattattaatagaaaaatca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14260421 acctctattgacagaggtcaccctataaaacttgggcttaagcagaagattcgcagtaaccagaacaacactcaaagacgtattattaatagaaaaatca 14260322  T
Q  414 acggtcaaagacgtattaaaaaatatatacatacatcgtaatttatataattgtcctcatgagtttaactcagttgg----tagggacaatgtataaaat 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    |||||| ||||||||||||    
T  14260321 acggtcaaagacgtattaaaaaatatatacatacatcgtaatttatataattgtcctcatgcgtttaactcagttggtagttagggataatgtataaaat 14260222  T
Q  510 atgcaaaaggaattggttaagacatgaattgttatcatcagattatgatgaaatatt 566  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14260221 atgcaaaaggaattggttaagacatgaattgttatcatcaaattatgatgaaatatt 14260165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 403 - 468
Target Start/End: Complemental strand, 12274652 - 12274587
Alignment:
Q  403 tagaaaaatcaacggtcaaagacgtattaaaaaatatatacatacatcgtaatttatataattgtc 468  Q
    ||||||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||    
T  12274652 tagaaaaatcaacggtcaaaatcctattaaaaaatctatacatacatcgtaatttatataattgtc 12274587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 40043224 - 40043184
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataa 506  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  40043224 gtcctcctgagtttaactcagttggtagggacaatgtataa 40043184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 512
Target Start/End: Complemental strand, 41573338 - 41573290
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  41573338 ttgtcctcgtgagtttaactcagttggtagggacaatgcataatatatg 41573290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 28661483 - 28661538
Alignment:
Q  460 ataattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||| | |||||||||||||||||| ||||| ||||||| ||||||||    
T  28661483 ataattgtcctcgtaagtttaactcagttggtaaggacattgtataatatatgcaa 28661538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 37013981 - 37014031
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||||||||||  ||||||||||||||    
T  37013981 tgtcctcgtgagcttaactcagttggtagggacaaaatataaaatatgcaa 37014031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 52267757 - 52267807
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  52267757 tgtcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaa 52267807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 512
Target Start/End: Complemental strand, 43840394 - 43840346
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||| ||||||||||||||||| || |||||||| ||||||||||    
T  43840394 ttgtcctcgtgagtttaactcagttgatatggacaatgcataaaatatg 43840346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 44801503 - 44801555
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||||| ||||||||||| |||||||| ||||| || ||||||||||||||    
T  44801503 ttgtcctcttgagtttaacttagttggtatggacactgcataaaatatgcaaa 44801555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 515
Target Start/End: Complemental strand, 10990770 - 10990715
Alignment:
Q  460 ataattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||| |||||||| |||| || |||||||||||| |||| ||||||||    
T  10990770 ataattgtcctcgtgagtttacctcaatttgtagggacaatgcataatatatgcaa 10990715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 516
Target Start/End: Complemental strand, 22336210 - 22336159
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||||| |||| ||||||||||||||| |||||||| |||||||| |||||    
T  22336210 tgtcctcttgagcttaactcagttggtatggacaatggataaaatacgcaaa 22336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 29935975 - 29936026
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||  |||||||||||||||||||| |||||||| |||| ||||||||    
T  29935975 ttgtccttgtgagtttaactcagttggtatggacaatgcataatatatgcaa 29936026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 512
Target Start/End: Complemental strand, 30678881 - 30678834
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||| |||| |||||||||||||||||||||||| |||| |||||    
T  30678881 tgtcctcgtgagcttaactcagttggtagggacaatgcataatatatg 30678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 2889986 - 2889944
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  2889986 tgagcttaactcagttggtagggacaatgcataatatatgcaa 2889944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 3431323 - 3431373
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||||||||||||||||||||| | |||| |||| ||||||||    
T  3431323 tgtcctcgtgagtttaactcagttggtaggaagaatgcataatatatgcaa 3431373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 5279438 - 5279388
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| ||||||||||||||| |||| |||||||| |||| ||||||||    
T  5279438 tgtcctcgtgagtttaactcagtcggtatggacaatgcataatatatgcaa 5279388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 7803398 - 7803448
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||| ||| ||||||||||||| ||||||||    
T  7803398 tgtcctcgtgagattaactcagtttgtatggacaatgtataatatatgcaa 7803448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 19396251 - 19396209
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  19396251 tgagtttaactcagttggtagggataatgcataatatatgcaa 19396209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 35199085 - 35199134
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  35199085 tgtcctcatgagtttaactta-ttggtatggacaatgtataacatatgcaa 35199134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 41763223 - 41763173
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| ||||||||||||||| |||| |||||||||||||    
T  41763223 tgtcctcgtgagcttagctcagttggtagggataatgcataaaatatgcaa 41763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 52043266 - 52043316
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||||||| ||||||||||| ||| |||| |||||||||||||    
T  52043266 tgtcctcgtgagtttagctcagttggtatggataatgcataaaatatgcaa 52043316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 514
Target Start/End: Complemental strand, 619468 - 619427
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgca 514  Q
    |||| |||||||||||||||| |||||||||||| |||||||    
T  619468 tgagcttaactcagttggtagagacaatgtataatatatgca 619427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 3321485 - 3321534
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||||||| |||  ||||| |||||||||||||||||||||||    
T  3321485 gtcctcgtgagtttagctcgattggttgggacaatgtataaaatatgcaa 3321534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 512
Target Start/End: Original strand, 13261162 - 13261211
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||  |||||||||||||||||||||  |||||||||||| |||||    
T  13261162 attgtcccgatgagtttaactcagttggtaaagacaatgtataatatatg 13261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 21400090 - 21400041
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 21400041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 29234041 - 29233992
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||||||| |||||||||||  ||||||| |||||||||||||    
T  29234041 gtcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaa 29233992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 501
Target Start/End: Complemental strand, 34083709 - 34083672
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatg 501  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  34083709 ttgttctcatgagcttaactcagttggtagggacaatg 34083672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 37098548 - 37098499
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  37098548 gtcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaa 37098499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 512
Target Start/End: Original strand, 24529677 - 24529725
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||||||| ||||||||||| ||| ||||| || ||||||||||    
T  24529677 ttgtcctcatgagcttaactcagttagtatggacattgcataaaatatg 24529725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 28016256 - 28016208
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||| ||||||||| | |||||||  |||||||||||||    
T  28016256 tcctcatgagtttagctcagttgggatggacaatacataaaatatgcaa 28016208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 500
Target Start/End: Complemental strand, 36672787 - 36672747
Alignment:
Q  460 ataattgtcctcatgagtttaactcagttggtagggacaat 500  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  36672787 ataatagtcctcatgagtttaactcagttgatagagacaat 36672747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 37185724 - 37185684
Alignment:
Q  474 gagtttaactcagttggtagggacaatgtataaaatatgca 514  Q
    |||||||||||||||| ||||||||||| || |||||||||    
T  37185724 gagtttaactcagttgatagggacaatgcatcaaatatgca 37185684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 500
Target Start/End: Complemental strand, 44366017 - 44365981
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaat 500  Q
    |||||||| |||||||||||||||||||||| |||||    
T  44366017 ttgtcctcgtgagtttaactcagttggtaggaacaat 44365981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 516
Target Start/End: Complemental strand, 52262227 - 52262183
Alignment:
Q  472 atgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||| ||||||||||||||| | |||||| ||||||||||||||    
T  52262227 atgagcttaactcagttggtatgaacaatgcataaaatatgcaaa 52262183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 7553671 - 7553722
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| ||||||||||||||||||||||||||||| |||| ||||||||    
T  7553671 ttgtcctcgtgagtttaactcagttggtagggacaatgcataatatatgcaa 7553722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 13575279 - 13575332
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||| |||||||| |||||||||||||||||||| |||| ||||||||    
T  13575279 aattgtcctcgtgagtttagctcagttggtagggacaatgcataacatatgcaa 13575332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 6447183 - 6447232
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||||||||||||||||||| |||||||| |||| ||||||||    
T  6447183 gtcctcgtgagtttaactcagttggtatggacaatgcataatatatgcaa 6447232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 515
Target Start/End: Original strand, 26799190 - 26799227
Alignment:
Q  478 ttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||||||| |||||||||||||    
T  26799190 ttaactcagttggtagggacaatgcataaaatatgcaa 26799227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 9656063 - 9656015
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||| ||| ||||||||||| |||||||| |||||||||||||    
T  9656063 tcctcatgagcttagctcagttggtaaggacaatgcataaaatatgcaa 9656015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 512
Target Start/End: Complemental strand, 26886111 - 26886063
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||| ||||||||||| |||||||| |||||||| ||||||||||    
T  26886111 ttgtcctcgtgagtttaacttagttggtatggacaatgcataaaatatg 26886063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 459 - 515
Target Start/End: Original strand, 29499758 - 29499814
Alignment:
Q  459 tataattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||| |||| ||| |||| |||||| |||||||| |||||||||||||    
T  29499758 tataattgtcctcgtgagcttagctcaattggtatggacaatgcataaaatatgcaa 29499814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 33987748 - 33987800
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||  ||||||||||||||||||||| |||| ||||||| ||||||||    
T  33987748 attgtccttgtgagtttaactcagttggtagagacagtgtataatatatgcaa 33987800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 515
Target Start/End: Complemental strand, 8984574 - 8984512
Alignment:
Q  452 taatttatataattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||||| |||| |||||| ||||||||||||||| ||| ||||||||| ||||||||    
T  8984574 taatttgtataat-gtccccatgagcttaactcagttggtatggataatgtataatatatgcaa 8984512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 511
Target Start/End: Original strand, 14303157 - 14303204
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||||||| |||||||| ||||||||||| ||||||||||||| ||||    
T  14303157 ttgtcctcgtgagtttagctcagttggtatggacaatgtataatatat 14303204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 516
Target Start/End: Complemental strand, 27134480 - 27134437
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||||||||||||||||| | ||||||||||| |||||||||    
T  27134480 tgagtttaactcagttggtatgaacaatgtataatatatgcaaa 27134437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 32555246 - 32555297
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||||||| || |||||||| |||||||| |||||||||||||    
T  32555246 ttgtcctcgtgagtttagcttagttggtatggacaatgcataaaatatgcaa 32555297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 3672676 - 3672634
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||||| | ||||||| |||||||||||||    
T  3672676 tgagtttaactcagttggttgagacaatgcataaaatatgcaa 3672634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 4600338 - 4600296
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||    
T  4600338 tgagtttagctcagttggtagggacaatgtataatataggcaa 4600296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 511
Target Start/End: Original strand, 8687859 - 8687905
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    ||||||| ||| ||||||||| |||||||||||||||||||| ||||    
T  8687859 tgtcctcgtgaatttaactcaattggtagggacaatgtataatatat 8687905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 13004166 - 13004208
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||||||| |||||||| |||||||||||||    
T  13004166 tgagcttaactcagttggtatggacaatgcataaaatatgcaa 13004208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 13105095 - 13105137
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  13105095 tgagattaactcagttggtagggacaatgcataatatatgcaa 13105137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 14279631 - 14279589
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||||||  ||||||| |||||||||||||    
T  14279631 tgagtttaactcagttggtatagacaatgcataaaatatgcaa 14279589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 15079212 - 15079170
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  15079212 tgagcttaactcagttggtagggacaatgcataatatatgcaa 15079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 39821877 - 39821927
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  39821877 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 39821927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 462 - 516
Target Start/End: Original strand, 40399971 - 40400025
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||||||| || |  ||||||||||||| ||||||||| ||||||||||||||    
T  40399971 aattgtcctcgtgggcataactcagttggttgggacaatgcataaaatatgcaaa 40400025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 11708980 - 11709029
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 11709029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 13357508 - 13357459
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||||||| |||||||| |||| ||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 13357459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 511
Target Start/End: Original strand, 33377815 - 33377852
Alignment:
Q  474 gagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  33377815 gagtttaactcagttggtagggacaatgaataacatat 33377852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 34438398 - 34438447
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||| || |||||||| ||||||||||||||    
T  34438398 gtcctcgtgagcttaactcagtttgttgggacaatatataaaatatgcaa 34438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 514
Target Start/End: Complemental strand, 42200730 - 42200681
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgca 514  Q
    ||||||| |||| ||| |||||||| |||||||||||||||| |||||||    
T  42200730 tgtcctcgtgagcttagctcagttgatagggacaatgtataatatatgca 42200681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 515
Target Start/End: Complemental strand, 989639 - 989595
Alignment:
Q  471 catgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||||||||| ||||  ||| ||||||||    
T  989639 catgagtttaactcagttggtagggataatgcctaatatatgcaa 989595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 512
Target Start/End: Complemental strand, 1230730 - 1230682
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||  ||||||||||||||||||||| |||||| |||| |||||    
T  1230730 ttgtcctcgcgagtttaactcagttggtaggaacaatgcataatatatg 1230682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 8717541 - 8717493
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||||||| ||||||||||| |||||||| |||| ||||||||    
T  8717541 tcctcgtgagtttagctcagttggtatggacaatgcataatatatgcaa 8717493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Original strand, 10152451 - 10152499
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||| ||| |||||||||||  |||||||||||||||||||||    
T  10152451 tcctcgtgagcttagctcagttggtatagacaatgtataaaatatgcaa 10152499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 24023866 - 24023830
Alignment:
Q  479 taactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||| |||||||| |||||||||||||    
T  24023866 taactcagttggtatggacaatgcataaaatatgcaa 24023830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 512
Target Start/End: Original strand, 31511963 - 31512011
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||| ||| ||||| ||||||||||||||||||||||| |||| |||||    
T  31511963 ttgttctcgtgagtctaactcagttggtagggacaatgcataatatatg 31512011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 32944894 - 32944858
Alignment:
Q  479 taactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||| |||||||| |||||||||||||    
T  32944894 taactcagttggtatggacaatgcataaaatatgcaa 32944858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 37938487 - 37938539
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||||| |||||||| ||||||||||| ||| |||| |||| |||||||||    
T  37938487 ttgtcctcgtgagtttagctcagttggtatggataatgcataatatatgcaaa 37938539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 475 - 515
Target Start/End: Original strand, 43778022 - 43778062
Alignment:
Q  475 agtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||||  ||||||| |||||||||||||    
T  43778022 agtttaactcagttggtatagacaatgcataaaatatgcaa 43778062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 7738661 - 7738712
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  7738661 ttgtcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaa 7738712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 27397681 - 27397630
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| | |||||||||||||||||||| ||||||||||||| ||||||||    
T  27397681 ttgtccacgtgagtttaactcagttggtatggacaatgtataatatatgcaa 27397630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 8127456 - 8127506
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  8127456 tgtcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaa 8127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 51250301 - 51250251
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||| ||||||||||||| ||||||||    
T  51250301 tgtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaa 51250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 33771684 - 33771733
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||||||| ||||||||||||| ||||||||    
T  33771684 gtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaa 33771733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 334917 - 334865
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggac-aatgtataaaatatgcaa 515  Q
    |||||||| |||||||||||||||||||| |||| |||| |||||||||||||    
T  334917 ttgtcctcgtgagtttaactcagttggtatggacaaatgcataaaatatgcaa 334865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 46226143 - 46226095
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| ||||||||||||| ||||||||||||||| |||| ||||||||    
T  46226143 tcctcgtgagtttaactcaattggtagggacaatgcataatatatgcaa 46226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 9598431 - 9598482
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| |||  ||||||||| |||||||||||||||||||||||    
T  9598431 ttgtcctcgtgagcttagttcagttggttgggacaatgtataaaatatgcaa 9598482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 516
Target Start/End: Original strand, 21967557 - 21967600
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||    
T  21967557 tgagcttaactcagttggtaaggacaatgtataatatatgcaaa 21967600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 473 - 516
Target Start/End: Original strand, 21989993 - 21990036
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||    
T  21989993 tgagcttaactcagttggtaaggacaatgtataatatatgcaaa 21990036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 32484270 - 32484321
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| || |||||||||||||||||||| ||||||||  ||||||||||||    
T  32484270 ttgtcttcgtgagtttaactcagttggtatggacaatgcttaaaatatgcaa 32484321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 516
Target Start/End: Complemental strand, 48924387 - 48924336
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||||| |||||||| || |||||||||||||||||||||| |||| ||||    
T  48924387 tgtcctcgtgagtttagcttagttggtagggacaatgtataatatatacaaa 48924336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 51505865 - 51505916
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| ||||||||| |||||||| || |||||||| |||||||||||||    
T  51505865 ttgtccttatgagtttagctcagttgatatggacaatgcataaaatatgcaa 51505916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 1757737 - 1757687
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||||| |||||| |||| ||||||||    
T  1757737 tgtcctcgtgagcttaactcagttggtaggaacaatgcataatatatgcaa 1757687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 7464558 - 7464512
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||| |||| |||||||||||||||||||||||| |||| |||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatatg 7464512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 7757076 - 7757126
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||| |||  |||||||||| ||||||| ||||||||||||||    
T  7757076 tgtcctcatgagcttagttcagttggtatggacaatatataaaatatgcaa 7757126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 10922368 - 10922326
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  10922368 tgagcttaactcagttggtagggacaatgcataatatatgcaa 10922326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 12976662 - 12976620
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  12976662 tgagtttaactcagttgatagggacaatgcataatatatgcaa 12976620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 21506826 - 21506776
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  21506826 tgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 21506776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 35126329 - 35126287
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||||||| |||| |||| ||||||||    
T  35126329 tgagtttaactcagttggtagggataatgcataatatatgcaa 35126287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 36431810 - 36431852
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||    
T  36431810 tgagtttagctcagttggtagggataatgtataatatatgcaa 36431852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 42401433 - 42401475
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||||||||||||||| |||  ||||||||    
T  42401433 tgagtttaactcagttggtagggacaatgcatagtatatgcaa 42401475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 44579629 - 44579679
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  44579629 tgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 44579679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 512
Target Start/End: Original strand, 7827499 - 7827548
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||| ||||||||||||||||| || |||||||| |||| |||||    
T  7827499 attgtcctcgtgagtttaactcagttgatatggacaatgcataatatatg 7827548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 512
Target Start/End: Original strand, 7829887 - 7829936
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||| ||||||||||||||||| || |||||||| |||| |||||    
T  7829887 attgtcctcgtgagtttaactcagttgatatggacaatgcataatatatg 7829936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 18870792 - 18870743
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 18870743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 21914138 - 21914089
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||| ||||||||||||||| |||||||| |||| ||||||||    
T  21914138 gtccccatgagcttaactcagttggtaaggacaatgcataatatatgcaa 21914089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 28244171 - 28244122
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||||||| | |||||| |||||||||||||    
T  28244171 gtcctcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaa 28244122  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 29631180 - 29631229
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| ||| ||||||||||| |||||||| |||| ||||||||    
T  29631180 gtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaa 29631229  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 40520746 - 40520795
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| ||||||||||| ||| ||| |||| |||||||||||||    
T  40520746 gtcctcatgagcttaactcagtttgtatggataatgcataaaatatgcaa 40520795  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 47943292 - 47943341
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| |||||||||||||| |||||| || |||||||||||||    
T  47943292 gtcctcgtgagcttaactcagttggttgggacagtgcataaaatatgcaa 47943341  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 5186824 - 5186876
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||| ||||||||| ||||||||||||||  ||| ||||||||    
T  5186824 attgtcctcgtgagcttaactcagctggtagggacaatgcttaatatatgcaa 5186876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 25340990 - 25340942
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  25340990 tcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 25340942  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 511
Target Start/End: Complemental strand, 39869869 - 39869829
Alignment:
Q  471 catgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||||||||||||||||||||| |||||||| |||| ||||    
T  39869869 catgagtttaactcagttggtaaggacaatgcataatatat 39869829  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 514
Target Start/End: Original strand, 45647316 - 45647348
Alignment:
Q  482 ctcagttggtagggacaatgtataaaatatgca 514  Q
    ||||||||||||||||| |||||||||||||||    
T  45647316 ctcagttggtagggacattgtataaaatatgca 45647348  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 48234512 - 48234472
Alignment:
Q  474 gagtttaactcagttggtagggacaatgtataaaatatgca 514  Q
    |||||||||||||||||| ||||||||| |||| |||||||    
T  48234512 gagtttaactcagttggtggggacaatgcataatatatgca 48234472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 463 - 517
Target Start/End: Original strand, 32062014 - 32062068
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaaa 517  Q
    ||||||||| |||| |||||||||||||||| |||||||||||| ||||||||||    
T  32062014 attgtcctcgtgagattaactcagttggtagagacaatgtataatatatgcaaaa 32062068  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 44454506 - 44454555
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  44454506 gtcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaa 44454555  T

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Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 48103743 - 48103692
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  48103743 ttgtcctcgtgagcttaactcagttggttgggacaatgcataaaatatgcaa 48103692  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 23198816 - 23198766
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||| |||||||||||||||||||| | |||||| ||||||||||||||    
T  23198816 gtcctcgtgagtttaactcagttggtatgaacaatgcataaaatatgcaaa 23198766  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 36428149 - 36428191
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  36428149 tgagcttaactcagttggtatggacaatgtataaaatatgcaa 36428191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 40187703 - 40187657
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||    
T  40187703 gtcctcatgagcttaactcagttggtagggacaatgcataatatatg 40187657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 46675899 - 46675949
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| ||||  |||||||||||||| ||||||||||||||||||||||    
T  46675899 tgtcctcgtgagcgtaactcagttggtaaggacaatgtataaaatatgcaa 46675949  T

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Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 6579612 - 6579661
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| |||||||| |||||| ||||||||||||||||||||||    
T  6579612 gtcctcgtgagcttaactcaattggtatggacaatgtataaaatatgcaa 6579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 21993176 - 21993225
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  21993176 gtcctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaa 21993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 473 - 514
Target Start/End: Complemental strand, 29461881 - 29461840
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgca 514  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  29461881 tgagtttaactcagttggtagggacaatgcataatatatgca 29461840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 518
Target Start/End: Original strand, 18378396 - 18378448
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaaag 518  Q
    |||||| |||| ||| |||||||||| ||||||||| ||||||||||||||||    
T  18378396 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatatgcaaaag 18378448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 512
Target Start/End: Original strand, 22267573 - 22267621
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||| ||||||||||||||||||||| ||||||| |||| |||||    
T  22267573 ttgtcctcgtgagtttaactcagttggtagagacaatgcataatatatg 22267621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 27993099 - 27993047
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||| ||||||||||||||| | |||||| |||||||||||||    
T  27993099 attgtcctcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaa 27993047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 43681060 - 43681008
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| || ||||||||||||||||| | ||||||||| |||||||||||||    
T  43681060 attgtcatcgtgagtttaactcagttgattgggacaatgcataaaatatgcaa 43681008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 507
Target Start/End: Complemental strand, 19036485 - 19036442
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaa 507  Q
    |||||||||||||||||||||||||| |||| |||||| |||||    
T  19036485 ttgtcctcatgagtttaactcagttgataggaacaatgcataaa 19036442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 19416506 - 19416557
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  19416506 ttgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 19416557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 507
Target Start/End: Original strand, 20718151 - 20718194
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaa 507  Q
    |||||||||||||||||||||||||| |||| |||||| |||||    
T  20718151 ttgtcctcatgagtttaactcagttgataggaacaatgcataaa 20718194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 36032924 - 36032975
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||||||||||| ||||||||  ||||||||||| ||||||||    
T  36032924 ttgtcctcgtgagtttaactcggttggtagtaacaatgtataatatatgcaa 36032975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 1399155 - 1399205
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||||||||||||||||||| |||||||| || | ||||||||    
T  1399155 tgtcctcgtgagtttaactcagttggtatggacaatgcatgatatatgcaa 1399205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 10025987 - 10026037
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||  |||||||| |||||||||||||    
T  10025987 tgtcctcgtgagcttaactcagttggtttggacaatgcataaaatatgcaa 10026037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 18505717 - 18505675
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||| |||||||||||||||||||| |||||||||||||    
T  18505717 tgagcttagctcagttggtagggacaatgcataaaatatgcaa 18505675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 19599146 - 19599188
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||| |||||||| |||| ||||||||    
T  19599146 tgagtttaactcagttggtatggacaatgcataatatatgcaa 19599188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 20576478 - 20576428
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| ||||| |||| |||||||||||||||||||||||    
T  20576478 tgtcctcgtgagcttagctcagctggttgggacaatgtataaaatatgcaa 20576428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 21136832 - 21136874
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||    
T  21136832 tgagcttaactcagttggtatggacaatgtataatatatgcaa 21136874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 34773224 - 34773274
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| ||||  ||||||||||||||||||| |||| ||||||||    
T  34773224 tgtcctcatgactttagttcagttggtagggacaatgcataatatatgcaa 34773274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 501
Target Start/End: Complemental strand, 43173216 - 43173178
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatg 501  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  43173216 attgtcctcacgagtttaactcatttggtagggacaatg 43173178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 4905266 - 4905319
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||| |||| |||||||||||| |  |||||||| |||||||||||||    
T  4905266 aattgtcctcgtgagcttaactcagttgttgtggacaatgcataaaatatgcaa 4905319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 512
Target Start/End: Original strand, 24839479 - 24839528
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||| |||| |||||||||||||||  ||||||| ||||||||||    
T  24839479 attgtcctcgtgagcttaactcagttggtatagacaatgcataaaatatg 24839528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 35103490 - 35103539
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||| ||||||||| |||||||||||||    
T  35103490 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatatgcaa 35103539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 516
Target Start/End: Complemental strand, 40658766 - 40658713
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||||||| || | ||| |||| |||||||| |||||||||||||||||||||    
T  40658766 attgtcctcgtgggcttagctcacttggtaggaacaatgtataaaatatgcaaa 40658713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 47342501 - 47342452
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| ||||||||||||||  |||||||| |||| ||||||||    
T  47342501 gtcctcatgagcttaactcagttggtttggacaatgcataatatatgcaa 47342452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 47589624 - 47589571
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||| |||| ||| ||||||||||| | |||||| |||||||||||||    
T  47589624 aattgtcctcgtgagcttagctcagttggtatgaacaatgcataaaatatgcaa 47589571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 8883544 - 8883596
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||| ||||||||||||||| |||||||| |||| || |||||    
T  8883544 attgtcctcgtgagcttaactcagttggtatggacaatgcataatatgtgcaa 8883596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 9819615 - 9819567
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||||||| ||||||||||||| |||||| |||| ||||||||    
T  9819615 tcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaa 9819567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 10721540 - 10721492
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||||||| ||||||||||||| |||||| |||| ||||||||    
T  10721540 tcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaa 10721492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 516
Target Start/End: Complemental strand, 25226661 - 25226617
Alignment:
Q  472 atgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||| ||||||||||||| |  ||||||||||||||||||||||    
T  25226661 atgagcttaactcagttggcatagacaatgtataaaatatgcaaa 25226617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 472 - 516
Target Start/End: Complemental strand, 25236493 - 25236449
Alignment:
Q  472 atgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||| ||||||||||||| |  ||||||||||||||||||||||    
T  25236493 atgagcttaactcagttggcatagacaatgtataaaatatgcaaa 25236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 47342668 - 47342720
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||  ||| ||||||||||| |||||||| |||||||||||||    
T  47342668 attgtcctcgtgaacttagctcagttggtatggacaatgcataaaatatgcaa 47342720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 515
Target Start/End: Complemental strand, 1770 - 1730
Alignment:
Q  475 agtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  1770 agtttaactcagttggtagggacaatgcataaaatatgcaa 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 12735312 - 12735261
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| |||||||||||||| ||||||||| |||||||||||||    
T  12735312 ttgtcctcgtgagcttaactcagttggttgggacaatgcataaaatatgcaa 12735261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 21296751 - 21296801
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  21296751 tgtcctcgtgagtttagctcagttggttgggacaatgcataaaatatgcaa 21296801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 24373781 - 24373728
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||| ||||||||||||| ||||||| ||||||| |||| ||||||||    
T  24373781 aattgtcctcgtgagtttaactcaattggtagagacaatgcataatatatgcaa 24373728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 4922477 - 4922426
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||  |||||| |||||||||||| ||||||||| ||||||||    
T  4922477 ttgtcctcatgaacttaacttagttggtagggataatgtataatatatgcaa 4922426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 2108726 - 2108768
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||||||| |||||||| |||||||||||||    
T  2108726 tgagcttaactcagttggtatggacaatgcataaaatatgcaa 2108768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Complemental strand, 7281465 - 7281419
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||| |||||||||||| |||||||| |||||||||||| |||||    
T  7281465 gtcctcgtgagtttaactcggttggtagagacaatgtataatatatg 7281419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 9444950 - 9445000
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| ||||||||||| | ||||||||||||||||||||    
T  9444950 tgtcctcgtgagcttagctcagttggtatgaacaatgtataaaatatgcaa 9445000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 516
Target Start/End: Complemental strand, 26489999 - 26489965
Alignment:
Q  482 ctcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||||| ||||||||||||||||||||||||||    
T  26489999 ctcagttgatagggacaatgtataaaatatgcaaa 26489965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 28757084 - 28757042
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||    
T  28757084 tgagcttaactcagttggtaaggacaatgtataatatatgcaa 28757042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 331953 - 331904
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| |||||||||||||||| ||||||| |||| ||||||||    
T  331953 gtcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaa 331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 28363542 - 28363493
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| |||||||||||| ||  || ||||||||||||||||||    
T  28363542 gtcctcatgagcttaactcagttgatatagataatgtataaaatatgcaa 28363493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 515
Target Start/End: Original strand, 29283821 - 29283858
Alignment:
Q  478 ttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  29283821 ttaactcagttggtagagacaatgtataatatatgcaa 29283858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 516
Target Start/End: Complemental strand, 30358360 - 30358311
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||| |||||||||||||||||||| ||| |||||||||  ||||||||    
T  30358360 tcctcgtgagtttaactcagttggtaaggaaaatgtataatgtatgcaaa 30358311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 866355 - 866303
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||||||| ||||||||||||| || ||| |||| ||||||||    
T  866355 attgtcctcgtgagtttagctcagttggtaggcacgatgcataatatatgcaa 866303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 514
Target Start/End: Complemental strand, 6555566 - 6555534
Alignment:
Q  482 ctcagttggtagggacaatgtataaaatatgca 514  Q
    ||||||||||||||||||||||||| |||||||    
T  6555566 ctcagttggtagggacaatgtataatatatgca 6555534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 12333638 - 12333586
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||| ||| ||||||| ||| |||||||| |||||||||||||    
T  12333638 attgtcctcgtgagcttagctcagttagtatggacaatgcataaaatatgcaa 12333586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Original strand, 17382079 - 17382127
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||| ||| ||||||||||| ||||||||||||| ||||||||    
T  17382079 tcctcgtgagcttagctcagttggtatggacaatgtataatatatgcaa 17382127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000005; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 781855 - 781906
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| || |||| |||||||||||| |||||||||||||||||||||||||    
T  781855 ttgtcgtcttgagcttaactcagttgatagggacaatgtataaaatatgcaa 781906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 11637640 - 11637590
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  11637640 tgtcctcgtgagcttaactcagttggtatggacaatgcataaaatatgcaa 11637590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 33645757 - 33645707
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||||||| ||||||||||||| ||||||||    
T  33645757 tgtcctcgtgagcttaactcagttggtatggacaatgtataatatatgcaa 33645707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 33995791 - 33995833
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  33995791 tgagcttaactcaattggtagggacaatgtataaaatatgcaa 33995833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 467 - 516
Target Start/End: Original strand, 17861974 - 17862023
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||| |||||||| |||||||||||||||||||| |||| |||||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaaa 17862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 511
Target Start/End: Complemental strand, 37054336 - 37054291
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||    
T  37054336 gtcctcatgagtttagctcagttggtagggacaatgcataatatat 37054291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 436636 - 436585
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||||||| ||||||||||||||||| |||||||  |||||||    
T  436636 ttgtcctcgtgagtttagctcagttggtagggacattgtataatttatgcaa 436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 22555223 - 22555274
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| ||||||||||||||| |||||||| ||| |||||||||    
T  22555223 ttgtcctcgtgagcttaactcagttggtatggacaatgcatataatatgcaa 22555274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 512
Target Start/End: Original strand, 28447486 - 28447533
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||| |||||||||||||||| |||||||||||| |||| |||||    
T  28447486 tgtcctcgtgagtttaactcagttagtagggacaatgcataatatatg 28447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 515
Target Start/End: Complemental strand, 36271083 - 36271040
Alignment:
Q  472 atgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||    
T  36271083 atgagtttaactcggttggtatggacaatgtataaaatacgcaa 36271040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 3156528 - 3156574
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||| |||||||||||||||||||| ||| |||| ||||||||||    
T  3156528 gtcctcgtgagtttaactcagttggtatggataatgcataaaatatg 3156574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 6489000 - 6489050
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  6489000 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 6489050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 8350664 - 8350714
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||| |||||||||||||||||| | |||||||| |||| |||||||||    
T  8350664 gtcctcgtgagtttaactcagttggcatggacaatgcataatatatgcaaa 8350714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 11720895 - 11720937
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  11720895 tgagcttaactcagttggtagggacaatgcataatatatgcaa 11720937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 515
Target Start/End: Original strand, 18391589 - 18391643
Alignment:
Q  461 taattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| || |||| ||| ||||||||||| |||||||| |||||||||||||    
T  18391589 taattgtcttcttgagcttagctcagttggtaaggacaatgcataaaatatgcaa 18391643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 515
Target Start/End: Original strand, 18789025 - 18789079
Alignment:
Q  461 taattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| |||  ||| |||||||||||| ||||||| |||||||||||||    
T  18789025 taattgtcctcgtgatattagctcagttggtagagacaatgcataaaatatgcaa 18789079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 20175820 - 20175870
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| |||||||||||| ||| ||||||| |||||||||||||    
T  20175820 tgtcctcgtgagcttaactcagttgttagagacaatgcataaaatatgcaa 20175870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 25509304 - 25509354
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||||||||||| |||||||||||| ||| |||||||||    
T  25509304 tgtcctcgtgagcttaactcagttagtagggacaatgcatataatatgcaa 25509354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 28207125 - 28207175
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  28207125 tgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 28207175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 515
Target Start/End: Original strand, 32622900 - 32622938
Alignment:
Q  477 tttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  32622900 tttagctcagttggtatggacaatgtataaaatatgcaa 32622938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 33654749 - 33654791
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  33654749 tgagcttaactcagttggtagggacaatgcataatatatgcaa 33654791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 34436844 - 34436894
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  34436844 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 34436894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 35270749 - 35270699
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| |||||||||| ||||||||| |||||||||||||    
T  35270749 tgtcctcgtgagcttagctcagttggttgggacaatgcataaaatatgcaa 35270699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 40445976 - 40446026
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| ||||||||||||||||| || |||||||| |||| ||||||||    
T  40445976 tgtcctcgtgagtttaactcagttgataaggacaatgcataatatatgcaa 40446026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 40837971 - 40837921
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||  ||||||||||||||| ||||||| ||||||||||||||    
T  40837971 tgtcctcgtgaacttaactcagttggtatggacaatatataaaatatgcaa 40837921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 5485180 - 5485229
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  5485180 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 5485229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 5551348 - 5551299
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| ||| |||||||||| || |||||| |||||||||||||    
T  5551348 gtcctcatgagcttagctcagttggttggaacaatgcataaaatatgcaa 5551299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 15889405 - 15889454
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 15889454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 34191427 - 34191476
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||| ||||||||| |||||||||||||    
T  34191427 gtcctcgtgagcttagctcagttggttgggacaatgcataaaatatgcaa 34191476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 516
Target Start/End: Original strand, 41344579 - 41344620
Alignment:
Q  475 agtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||||||||||||||| | ||||||| ||||||||||||||    
T  41344579 agtttaactcagttggttgagacaatgcataaaatatgcaaa 41344620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 479 - 515
Target Start/End: Complemental strand, 866081 - 866045
Alignment:
Q  479 taactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  866081 taactcagttggtatggataatgtataaaatatgcaa 866045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 512
Target Start/End: Original strand, 1512847 - 1512895
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||| |||| ||||||||||| |||||||||||| |||| |||||    
T  1512847 ttgtcctcgtgagcttaactcagttagtagggacaatgcataatatatg 1512895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 5998937 - 5998989
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||||| || |||||  | |||||||||||||||||||||| |||||||||    
T  5998937 ttgtcctcctgggtttagtttagttggtagggacaatgtataatatatgcaaa 5998989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 16701647 - 16701599
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  16701647 tcctcgtgagcttagctcagttggtagggacaatgaataatatatgcaa 16701599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 459 - 511
Target Start/End: Original strand, 29178434 - 29178486
Alignment:
Q  459 tataattgtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||| |||| ||| |||| ||||||||||||||| |||||||| |||||||||    
T  29178434 tatatttgttctcgtgagcttaactcagttggtatggacaatgcataaaatat 29178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 511
Target Start/End: Complemental strand, 32131672 - 32131624
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    ||||||||||||||||||||| |||||||| | |||||| |||| ||||    
T  32131672 attgtcctcatgagtttaactaagttggtatgaacaatgcataatatat 32131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000005; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 48171873 - 48171924
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| ||||||||    
T  48171873 ttgtccttatgagcttaactcagttggtagagacaatgtataatatatgcaa 48171924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 20096338 - 20096288
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||||||||||||||||||||||| |||| |||| ||||||||    
T  20096338 tgtcctcgtgagtttaactcagttggtagggataatgcataatatatgcaa 20096288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 30380531 - 30380573
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  30380531 tgagtttaactcagttggtaaggacaatgtataatatatgcaa 30380573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 48067134 - 48067176
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  48067134 tgagttaaactcagttggtagggacaatgtataatatatgcaa 48067176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 7248327 - 7248379
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| || ||||||||||||||||| | ||||||||| |||||||||||||    
T  7248327 attgtcatcgtgagtttaactcagttgattgggacaatgcataaaatatgcaa 7248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 516
Target Start/End: Complemental strand, 54151694 - 54151642
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||||| |||| ||||||||||||||| ||| ||||||||| |||||||||    
T  54151694 ttgtcctcgtgagcttaactcagttggtaaggataatgtataatatatgcaaa 54151642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 10303580 - 10303529
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  10303580 ttgtcctcgtgagcttagctcagttggtaaggacaatgcataaaatatgcaa 10303529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 12671817 - 12671766
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||||||| |||||||||||  ||||||| |||||||||||||    
T  12671817 ttgtcctcgtgagtttagctcagttggtatagacaatgcataaaatatgcaa 12671766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 13276121 - 13276172
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| |||||||| ||||||||||||||| |||| ||||||||    
T  13276121 ttgtcctcgtgagcttaactcaattggtagggacaatgcataatatatgcaa 13276172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 512
Target Start/End: Original strand, 43722758 - 43722805
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||| |||||||||||||||||||| |||||||| |||| |||||    
T  43722758 tgtcctcgtgagtttaactcagttggtatggacaatgcataatatatg 43722805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 512
Target Start/End: Original strand, 897423 - 897465
Alignment:
Q  470 tcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||    
T  897423 tcatgagtttagctcagttggtatggacaatgtataatatatg 897465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 7030961 - 7030911
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| |||||||||||||||  ||||||| |||||||||||||    
T  7030961 tgtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaa 7030911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 11949831 - 11949781
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||| ||| ||||||||||| |||||||| |||| ||||||||    
T  11949831 tgtcctcatgagcttagctcagttggtatggacaatgcataatatatgcaa 11949781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Complemental strand, 14577574 - 14577524
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||| |||||||| ||||||||||| |||||||| |||| |||||||||    
T  14577574 gtcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaaa 14577524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 21318321 - 21318271
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||  ||| |||||||||||||||||||||||| |||| ||||||||    
T  21318321 tgtcctcgcgagcttaactcagttggtagggacaatgcataatatatgcaa 21318271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Complemental strand, 50362207 - 50362157
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  50362207 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 50362157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 51002280 - 51002330
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| |||||||||||||||  ||||||| |||||||||||||    
T  51002280 tgtcctcgtgagcttaactcagttggtatagacaatgcataaaatatgcaa 51002330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 53261478 - 53261528
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| ||| || ||||||||||| |||||||||||||||||||    
T  53261478 tgtcctcgtgagcttagctgagttggtaggggcaatgtataaaatatgcaa 53261528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 56204948 - 56204990
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||| |||||||| |||| ||||||||    
T  56204948 tgagtttaactcagttggtaaggacaatgcataatatatgcaa 56204990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 2649804 - 2649751
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| | | |||||| |||||||||||||||||||| |||| ||||||||    
T  2649804 aattgtccccgtaagtttagctcagttggtagggacaatgcataatatatgcaa 2649751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 9946421 - 9946470
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 9946470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 507
Target Start/End: Original strand, 15976022 - 15976063
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaa 507  Q
    ||||||||||||||| ||||||||||||||| ||| ||||||    
T  15976022 gtcctcatgagtttagctcagttggtagggataatatataaa 15976063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 20799461 - 20799412
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 20799412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 501
Target Start/End: Complemental strand, 26927093 - 26927056
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatg 501  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  26927093 ttgtcctcatgagtttaactcagttgataggaacaatg 26927056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 27537742 - 27537791
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| |||||||| |||||| |||||||| |||| ||||||||    
T  27537742 gtcctcatgagcttaactcaattggtatggacaatgcataatatatgcaa 27537791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 30780119 - 30780168
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||||||| | |||| ||||||||||||||| |||||||| |||||||||    
T  30780119 aattgtccacgtgagcttaactcagttggtatggacaatgcataaaatat 30780168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 515
Target Start/End: Complemental strand, 31041436 - 31041383
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||| |||| |||||||| |||||||  ||||||||||| ||||||||    
T  31041436 aattgtcctcgtgagcttaactcatttggtagaaacaatgtataatatatgcaa 31041383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 515
Target Start/End: Complemental strand, 32737798 - 32737753
Alignment:
Q  470 tcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||| | |||||| ||||||||||||| ||||||||    
T  32737798 tcatgagtttaacttaattggtatggacaatgtataatatatgcaa 32737753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 511
Target Start/End: Complemental strand, 36662436 - 36662391
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||||| ||||||||||||||||||||  ||||||| |||||||||    
T  36662436 gtcctcgtgagtttaactcagttggtatagacaatgcataaaatat 36662391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 37725788 - 37725739
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| ||||||| || |||||||||||||||||||||||    
T  37725788 gtcctcgtgagcttagctcagtttgttgggacaatgtataaaatatgcaa 37725739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 41520948 - 41520997
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| || |||||||||||||||| ||||||| |||| ||||||||    
T  41520948 gtcctcataagcttaactcagttggtagagacaatgcataatatatgcaa 41520997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 43034409 - 43034360
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||||||| |||||||| |||| ||||||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 43034360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 516
Target Start/End: Complemental strand, 44918283 - 44918230
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||| || ||||||||||||||||| ||| |||||| ||||| |||||||||    
T  44918283 attgtcttcgtgagtttaactcagttgatagagacaatatataatatatgcaaa 44918230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 515
Target Start/End: Original strand, 49579961 - 49579998
Alignment:
Q  478 ttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  49579961 ttaactcaattggtagggacaatgtataatatatgcaa 49579998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 512
Target Start/End: Original strand, 5185120 - 5185168
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||| ||||||||||||||||||||  || ||||||||| |||||    
T  5185120 ttgtcctcgtgagtttaactcagttggtatagataatgtataatatatg 5185168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 17423247 - 17423195
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||  |||| |||||||||||||||| ||||||| |||| ||||||||    
T  17423247 attgtccttctgaggttaactcagttggtagagacaatgcataatatatgcaa 17423195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 501
Target Start/End: Complemental strand, 20043260 - 20043224
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatg 501  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  20043260 tgtcctcgtgagcttaactcagttggtagggacaatg 20043224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 512
Target Start/End: Original strand, 21465603 - 21465651
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    |||||||| |||||||||||||||| ||| |||||||| |||| |||||    
T  21465603 ttgtcctcgtgagtttaactcagttagtaaggacaatgcataatatatg 21465651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 511
Target Start/End: Original strand, 23626376 - 23626420
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    ||||| ||||||||||||||||||||  |||||||||||| ||||    
T  23626376 tcctcgtgagtttaactcagttggtatagacaatgtataatatat 23626420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Original strand, 23775513 - 23775561
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||| ||| | |||||||||||||||||| |||| ||||||||    
T  23775513 tcctcatgagcttagcacagttggtagggacaatgcataatatatgcaa 23775561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 24885866 - 24885818
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||| ||||||||||||||| |||||||  |||||||||||||    
T  24885866 tcctcgtgagcttaactcagttggtatggacaatacataaaatatgcaa 24885818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 506
Target Start/End: Original strand, 26610189 - 26610217
Alignment:
Q  478 ttaactcagttggtagggacaatgtataa 506  Q
    |||||||||||||||||||||||||||||    
T  26610189 ttaactcagttggtagggacaatgtataa 26610217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 517
Target Start/End: Original strand, 51286445 - 51286497
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaaa 517  Q
    ||||||| |||| |||||||||| ||||  || ||||||||||||||||||||    
T  51286445 tgtcctcgtgagcttaactcagtgggtatagataatgtataaaatatgcaaaa 51286497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000005; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 3197148 - 3197097
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||||||| |||||||||||||||||||| |||| ||||||||    
T  3197148 ttgtcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaa 3197097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 17779061 - 17779010
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| ||||||||||||||||||||| ||||||| ||||||| |||||    
T  17779061 ttgtcctcgtgagtttaactcagttggtagagacaatgcataaaatttgcaa 17779010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 41859853 - 41859895
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  41859853 tgagtttaactcagttggtatggacaatgcataaaatatgcaa 41859895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 6723144 - 6723095
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| ||||||||||||||||| || ||||||||||||| ||||||||    
T  6723144 gtcctcgtgagtttaactcagttgatatggacaatgtataatatatgcaa 6723095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 9842269 - 9842220
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||| |||||||||||||||||||| |||||||||||||    
T  9842269 gtcctcgtgagcttagctcagttggtagggacaatgcataaaatatgcaa 9842220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 14925288 - 14925247
Alignment:
Q  477 tttaactcagttggtagggacaatgtataaaatatgcaaaag 518  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  14925288 tttaactcagttggtaaggacaatgtataatatatgcaaaag 14925247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 16221413 - 16221364
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||| ||||||||||| | |||||| |||||||||||||    
T  16221413 gtcctcatgagtttagctcagttggtatgaacaatgcataaaatatgcaa 16221364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 462 - 515
Target Start/End: Original strand, 27935046 - 27935099
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| || ||||||||||||||||||||||||||||| | || ||||||||    
T  27935046 aattgtcatcgtgagtttaactcagttggtagggacaatgcagaatatatgcaa 27935099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 506
Target Start/End: Complemental strand, 11817413 - 11817373
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataa 506  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  11817413 gtcctcatgagcttaactcagttggtatggacaatgtataa 11817373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 12757109 - 12757169
Alignment:
Q  453 aatttatataattgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgc 513  Q
    ||||||| |||| ||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  12757109 aatttatctaatggtcttcatgaatttaactcagttggtaagaacaatgtataatatatgc 12757169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 28874622 - 28874570
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| || | |||||||||||||| |||| ||||||||||||||||||    
T  28874622 attgtcctcgtgggcttaactcagttggttgggataatgtataaaatatgcaa 28874570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 42778613 - 42778653
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataa 506  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  42778613 gtcctcatgagtttaactcagttggtaaggacaatgcataa 42778653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Complemental strand, 21482588 - 21482537
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||||||| ||||||||||| ||| ||||||||| ||||||||    
T  21482588 ttgtcctcgtgagtttagctcagttggtaaggataatgtataatatatgcaa 21482537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 45032685 - 45032736
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| ||| |||||||||||||||||||| |||| ||||||||    
T  45032685 ttgtcctcgtgagcttacctcagttggtagggacaatgcataatatatgcaa 45032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 19189904 - 19189862
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||    
T  19189904 tgagcttaactcagttagtatggacaatgtataaaatatgcaa 19189862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 22267506 - 22267556
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| | |||||||||||||||||| |||||||| |||| ||||||||    
T  22267506 tgtcctcgtaagtttaactcagttggtacggacaatgcataatatatgcaa 22267556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 511
Target Start/End: Original strand, 22558966 - 22559016
Alignment:
Q  461 taattgtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||| |||||| |||||||||||||||||||  |||||||| |||||||||    
T  22558966 taatggtcctcgtgagtttaactcagttggtttggacaatgcataaaatat 22559016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 26400744 - 26400794
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||||||| || |||||||||||| |||||||| |||| ||||||||    
T  26400744 tgtcctcatgagctttactcagttggtaaggacaatgcataatatatgcaa 26400794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 31815947 - 31815905
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| |||||||||||||||||||||||| |||| ||||||||    
T  31815947 tgagcttaactcagttggtagggacaatgcataatatatgcaa 31815905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Complemental strand, 38604024 - 38603982
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||| |||||||||| |||||||||||||||||||||||    
T  38604024 tgagcttagctcagttggttgggacaatgtataaaatatgcaa 38603982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 2256965 - 2257014
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||||||| |||||||| |||| ||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 2257014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 11560492 - 11560541
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||| ||| |||| ||||||||||||||| |||| ||||||||    
T  11560492 gtcctcatgagcttagctcaattggtagggacaatgcataatatatgcaa 11560541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 511
Target Start/End: Complemental strand, 29798584 - 29798539
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||||| |||| ||||||||||||||| |||||||| |||||||||    
T  29798584 gtcctcgtgagcttaactcagttggtatggacaatgcataaaatat 29798539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Original strand, 34977198 - 34977247
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| ||||||||||||||| |||||||| |||| ||||||||    
T  34977198 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 34977247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 511
Target Start/End: Original strand, 40257174 - 40257223
Alignment:
Q  462 aattgtcctcatgagtttaactcagttggtagggacaatgtataaaatat 511  Q
    |||||||||| |||| |||||||| |||||| ||||||||||||| ||||    
T  40257174 aattgtcctcgtgagcttaactcaattggtatggacaatgtataatatat 40257223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 519
Target Start/End: Complemental strand, 40365473 - 40365420
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaaagg 519  Q
    |||||| |||| ||| ||||||||||| | |||||| |||||||||||||||||    
T  40365473 gtcctcgtgagcttagctcagttggtatgtacaatgcataaaatatgcaaaagg 40365420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 471 - 499
Target Start/End: Complemental strand, 3169783 - 3169755
Alignment:
Q  471 catgagtttaactcagttggtagggacaa 499  Q
    |||||||||||||||||||||||||||||    
T  3169783 catgagtttaactcagttggtagggacaa 3169755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 12124536 - 12124588
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| | |||||||| ||||||||||| |||||||| |||| ||||||||    
T  12124536 attgtccccgtgagtttagctcagttggtaaggacaatgcataatatatgcaa 12124588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 517
Target Start/End: Complemental strand, 13922692 - 13922648
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaaaa 517  Q
    |||| |||||||||||||||||||||||| |||| |||| |||||    
T  13922692 tgagcttaactcagttggtagggacaatgcataatatatacaaaa 13922648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 473 - 517
Target Start/End: Original strand, 27314868 - 27314912
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaaaa 517  Q
    |||| ||||||||||||||| | |||||| |||||||||||||||    
T  27314868 tgagcttaactcagttggtaagaacaatgcataaaatatgcaaaa 27314912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 506
Target Start/End: Original strand, 34117450 - 34117478
Alignment:
Q  478 ttaactcagttggtagggacaatgtataa 506  Q
    |||||||||||||||||||||||||||||    
T  34117450 ttaactcagttggtagggacaatgtataa 34117478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 512
Target Start/End: Complemental strand, 34191373 - 34191329
Alignment:
Q  468 cctcatgagtttaactcagttggtagggacaatgtataaaatatg 512  Q
    ||||||||| ||| |||||||||||||||||||| |||| |||||    
T  34191373 cctcatgagcttagctcagttggtagggacaatgcataatatatg 34191329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 483 - 515
Target Start/End: Complemental strand, 37413229 - 37413197
Alignment:
Q  483 tcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||||||||||||| |||||||||||||    
T  37413229 tcagttggtagggacaatgcataaaatatgcaa 37413197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 42475180 - 42475128
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||| |||||||||||||||   |||||| |||||||||||||    
T  42475180 attgtcctcgtgagcttaactcagttggtataaacaatgcataaaatatgcaa 42475128  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 464 - 516
Target Start/End: Original strand, 43424651 - 43424703
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    ||||||||||||| ||| |||||||| | || |||||| ||||||||||||||    
T  43424651 ttgtcctcatgagcttagctcagttgattggaacaatgcataaaatatgcaaa 43424703  T

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Target: scaffold0045 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 63856 - 63906
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||| ||||    
T  63856 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaa 63906  T

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Target: scaffold0045; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 71188 - 71238
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||| ||||    
T  71188 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaaa 71238  T

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Target: scaffold0154 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 10827 - 10775
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| | |||||||| ||||||||||| |||||||| |||||||||||||    
T  10827 attgtccccgtgagtttagctcagttggtaaggacaatgcataaaatatgcaa 10775  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 467 - 515
Target Start/End: Complemental strand, 53446 - 53398
Alignment:
Q  467 tcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||| |||| ||||||||||||| |||||||||| |||||||||||||    
T  53446 tcctcgtgagcttaactcagttggaagggacaatgcataaaatatgcaa 53398  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Original strand, 185254 - 185306
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||| ||| ||||||||||| |||||||| |||||||||||||    
T  185254 attgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaa 185306  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 56776 - 56827
Alignment:
Q  464 ttgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||||| |||| ||| ||||||||||| ||||||||||||| ||||||||    
T  56776 ttgtcctcgtgagcttagctcagttggtatggacaatgtataatatatgcaa 56827  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 515
Target Start/End: Original strand, 161142 - 161184
Alignment:
Q  473 tgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||| ||||||||||||||| |||||||| |||||||||||||    
T  161142 tgagcttaactcagttggtatggacaatgcataaaatatgcaa 161184  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 515
Target Start/End: Original strand, 119562 - 119612
Alignment:
Q  465 tgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||| |||| |||||||||||| |||||||||||||||| || |||||    
T  119562 tgtcctcgtgagcttaactcagttgatagggacaatgtataatatttgcaa 119612  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 466 - 516
Target Start/End: Original strand, 239801 - 239851
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaaa 516  Q
    |||||| |||||||| ||||||||||| |||||||| |||| |||||||||    
T  239801 gtcctcgtgagtttagctcagttggtaaggacaatgcataatatatgcaaa 239851  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 515
Target Start/End: Complemental strand, 15997 - 15948
Alignment:
Q  466 gtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    |||||| |||| |||||||| |||||| ||||||||||||| ||||||||    
T  15997 gtcctcgtgagcttaactcaattggtaaggacaatgtataatatatgcaa 15948  T

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Target: scaffold0352 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 12699 - 12647
Alignment:
Q  463 attgtcctcatgagtttaactcagttggtagggacaatgtataaaatatgcaa 515  Q
    ||||||||| |||||||||||||||| ||| | | |||| |||||||||||||    
T  12699 attgtcctcgtgagtttaactcagttagtacgaataatgcataaaatatgcaa 12647  T

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