View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3132_high_2 (Length: 272)
Name: NF3132_high_2
Description: NF3132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3132_high_2 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 2788183 - 2788430
Alignment:
| Q |
1 |
atctttgcaatgtgttcatgatgaattgaatttttccttgttctttggatatgtttgtgtaacactttttccttcaacaattgttttcaacttgatcata |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2788183 |
atctttgcaatgtgttcatgatgaattgaatttttccttgttctttggatatgtttgtgtaacactttttccttcaacaattgttttcaacttgatcata |
2788282 |
T |
|
| Q |
101 |
taagtctttttgatttggagagagaaattaggtatagttctggataacaaattgttttgtttggttttaacttttaagattatggtcaccattcatttag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2788283 |
taagtctttttgatttggagagagaaattaggtatagttctggataacaaattgttttgtttggttttaacttttaagattatggtcaccattcatttag |
2788382 |
T |
|
| Q |
201 |
cttttaaatgcaaatatagtaaataaaaatttcaaattatgtcttatc |
248 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2788383 |
cttttaaatgcaaatatagtaaataaaattttcaaattatgtcttatc |
2788430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University