View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3133_low_10 (Length: 276)

Name: NF3133_low_10
Description: NF3133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3133_low_10
NF3133_low_10
[»] chr4 (48 HSPs)
chr4 (89-209)||(29379562-29379681)
chr4 (1-79)||(28196750-28196828)
chr4 (1-78)||(32703627-32703704)
chr4 (1-77)||(25161879-25161955)
chr4 (1-80)||(292780-292859)
chr4 (1-80)||(9380718-9380797)
chr4 (1-80)||(28196344-28196423)
chr4 (1-80)||(39744442-39744521)
chr4 (1-79)||(32703224-32703302)
chr4 (1-78)||(4239343-4239420)
chr4 (1-78)||(9380307-9380384)
chr4 (1-80)||(9023242-9023321)
chr4 (1-79)||(293194-293272)
chr4 (1-79)||(9023657-9023735)
chr4 (1-78)||(169416-169493)
chr4 (1-78)||(39086600-39086677)
chr4 (1-79)||(169012-169091)
chr4 (1-79)||(26207723-26207801)
chr4 (1-79)||(48405961-48406038)
chr4 (1-78)||(43292334-43292411)
chr4 (2-78)||(23540230-23540306)
chr4 (1-77)||(43292038-43292114)
chr4 (1-57)||(44468900-44468956)
chr4 (1-80)||(39744028-39744107)
chr4 (1-79)||(26207360-26207437)
chr4 (1-80)||(23539839-23539916)
chr4 (1-80)||(50678777-50678856)
chr4 (1-56)||(12757788-12757843)
chr4 (1-64)||(48406362-48406425)
chr4 (1-80)||(56505691-56505770)
chr4 (1-79)||(36095816-36095894)
chr4 (1-75)||(36096452-36096526)
chr4 (1-78)||(50679401-50679478)
chr4 (1-79)||(43051229-43051307)
chr4 (1-79)||(39912053-39912130)
chr4 (26-79)||(24775785-24775838)
chr4 (1-78)||(39912464-39912540)
chr4 (1-57)||(25162290-25162346)
chr4 (1-80)||(45830173-45830252)
chr4 (26-80)||(3930482-3930535)
chr4 (1-75)||(43050610-43050684)
chr4 (26-79)||(13198908-13198961)
chr4 (26-79)||(18077204-18077257)
chr4 (26-77)||(8181992-8182044)
chr4 (1-77)||(11529169-11529245)
chr4 (1-57)||(12758181-12758237)
chr4 (26-78)||(16555819-16555871)
chr4 (26-74)||(49178818-49178866)
[»] chr7 (37 HSPs)
chr7 (1-80)||(10533032-10533111)
chr7 (1-80)||(37889236-37889315)
chr7 (1-79)||(37972373-37972451)
chr7 (1-78)||(9035270-9035347)
chr7 (1-78)||(37888833-37888910)
chr7 (1-80)||(20418886-20418965)
chr7 (1-79)||(20419301-20419379)
chr7 (1-79)||(22740155-22740233)
chr7 (1-80)||(18864379-18864457)
chr7 (1-80)||(37971958-37972037)
chr7 (1-79)||(3205070-3205148)
chr7 (1-79)||(13744210-13744287)
chr7 (1-79)||(17156966-17157044)
chr7 (1-75)||(18863970-18864044)
chr7 (1-78)||(13741557-13741634)
chr7 (1-80)||(9034865-9034945)
chr7 (2-78)||(48359320-48359395)
chr7 (1-75)||(22740568-22740641)
chr7 (1-79)||(29292921-29292999)
chr7 (1-79)||(38826890-38826968)
chr7 (1-78)||(3204669-3204744)
chr7 (1-78)||(29293323-29293400)
chr7 (1-78)||(36527775-36527852)
chr7 (1-80)||(42419005-42419084)
chr7 (1-80)||(48359635-48359713)
chr7 (1-79)||(13863934-13864011)
chr7 (1-79)||(42418590-42418668)
chr7 (1-79)||(44600112-44600190)
chr7 (1-78)||(44599489-44599566)
chr7 (1-80)||(13863311-13863390)
chr7 (14-79)||(16198967-16199032)
chr7 (10-75)||(36527387-36527451)
chr7 (1-80)||(46816288-46816367)
chr7 (26-80)||(9412327-9412381)
chr7 (26-78)||(3687658-3687710)
chr7 (1-80)||(8643743-8643822)
chr7 (26-78)||(13772903-13772955)
[»] chr5 (44 HSPs)
chr5 (1-80)||(12498565-12498644)
chr5 (1-80)||(26571141-26571220)
chr5 (1-80)||(12498905-12498984)
chr5 (1-80)||(43464169-43464247)
chr5 (1-75)||(21207229-21207303)
chr5 (1-80)||(26570727-26570806)
chr5 (1-79)||(34147487-34147565)
chr5 (1-79)||(37610201-37610278)
chr5 (1-79)||(37780319-37780396)
chr5 (1-78)||(3888239-3888316)
chr5 (1-78)||(37780719-37780796)
chr5 (1-77)||(22729417-22729492)
chr5 (1-78)||(19514525-19514603)
chr5 (9-79)||(19514948-19515018)
chr5 (1-75)||(43463759-43463832)
chr5 (1-78)||(22729008-22729084)
chr5 (1-75)||(2817152-2817226)
chr5 (1-75)||(3888639-3888713)
chr5 (2-80)||(10098919-10098996)
chr5 (1-78)||(10098519-10098596)
chr5 (1-78)||(37610595-37610671)
chr5 (1-77)||(25940991-25941067)
chr5 (2-80)||(11351405-11351483)
chr5 (1-79)||(25940520-25940598)
chr5 (1-78)||(18817588-18817665)
chr5 (1-76)||(2817552-2817626)
chr5 (1-80)||(18816950-18817029)
chr5 (1-79)||(34147140-34147216)
chr5 (1-80)||(31569905-31569983)
chr5 (1-80)||(41072191-41072269)
chr5 (1-75)||(11316717-11316791)
chr5 (1-79)||(11350807-11350884)
chr5 (1-75)||(30401885-30401959)
chr5 (28-80)||(16466746-16466798)
chr5 (1-75)||(11316951-11317025)
chr5 (26-80)||(25115755-25115809)
chr5 (26-80)||(25174847-25174901)
chr5 (1-79)||(42919304-42919381)
chr5 (26-78)||(18433015-18433067)
chr5 (26-80)||(25116063-25116117)
chr5 (26-80)||(25175153-25175207)
chr5 (26-79)||(18433318-18433371)
chr5 (26-79)||(26020449-26020502)
chr5 (24-72)||(16726084-16726132)
[»] chr3 (38 HSPs)
chr3 (1-80)||(48159895-48159974)
chr3 (1-78)||(48160310-48160387)
chr3 (2-79)||(53687887-53687964)
chr3 (1-80)||(3353528-3353606)
chr3 (1-80)||(27238463-27238542)
chr3 (1-80)||(40848938-40849017)
chr3 (1-75)||(27238877-27238951)
chr3 (1-79)||(40848520-40848597)
chr3 (1-78)||(10348776-10348853)
chr3 (1-78)||(42672978-42673054)
chr3 (1-78)||(42673273-42673349)
chr3 (3-78)||(3353128-3353202)
chr3 (1-79)||(26007181-26007258)
chr3 (1-75)||(53766166-53766240)
chr3 (1-78)||(24485437-24485513)
chr3 (1-78)||(47666312-47666389)
chr3 (1-76)||(22429573-22429647)
chr3 (1-80)||(26007596-26007675)
chr3 (2-80)||(36180968-36181046)
chr3 (1-77)||(22429159-22429235)
chr3 (2-78)||(44008379-44008454)
chr3 (1-79)||(36180555-36180631)
chr3 (3-57)||(24485042-24485096)
chr3 (2-80)||(47665909-47665987)
chr3 (1-78)||(53688280-53688356)
chr3 (1-78)||(42456172-42456247)
chr3 (15-80)||(42455788-42455853)
chr3 (1-78)||(44007967-44008044)
chr3 (14-79)||(53766569-53766634)
chr3 (1-78)||(8314013-8314090)
chr3 (1-78)||(21896488-21896564)
chr3 (1-77)||(10348480-10348556)
chr3 (26-78)||(20969021-20969073)
chr3 (9-80)||(1928419-1928489)
chr3 (26-80)||(8315084-8315137)
chr3 (26-79)||(47871124-47871176)
chr3 (26-78)||(1927772-1927824)
chr3 (26-78)||(10293911-10293963)
[»] chr1 (61 HSPs)
chr1 (1-80)||(32163020-32163099)
chr1 (1-78)||(9347126-9347203)
chr1 (1-80)||(6703458-6703537)
chr1 (1-75)||(42611188-42611262)
chr1 (1-75)||(50430058-50430132)
chr1 (1-78)||(13918446-13918523)
chr1 (1-78)||(27172116-27172192)
chr1 (1-78)||(48105093-48105170)
chr1 (1-77)||(13918844-13918920)
chr1 (1-80)||(26815096-26815175)
chr1 (1-80)||(28633718-28633797)
chr1 (1-76)||(50526449-50526524)
chr1 (1-79)||(20480167-20480244)
chr1 (1-75)||(46823846-46823920)
chr1 (1-79)||(46824255-46824333)
chr1 (1-75)||(48104681-48104755)
chr1 (2-79)||(4692411-4692488)
chr1 (1-78)||(6703871-6703948)
chr1 (1-78)||(26814694-26814771)
chr1 (1-80)||(999502-999580)
chr1 (1-80)||(9347528-9347606)
chr1 (3-78)||(20480591-20480665)
chr1 (1-80)||(28634134-28634213)
chr1 (1-75)||(42611591-42611665)
chr1 (1-78)||(21687025-21687102)
chr1 (1-78)||(50615598-50615674)
chr1 (1-78)||(50623426-50623502)
chr1 (2-78)||(21687445-21687520)
chr1 (2-78)||(49317752-49317827)
chr1 (1-80)||(44911023-44911102)
chr1 (1-75)||(999115-999188)
chr1 (1-78)||(20371329-20371406)
chr1 (1-79)||(27172518-27172596)
chr1 (1-79)||(50429655-50429733)
chr1 (1-78)||(49318143-49318219)
chr1 (2-75)||(50949164-50949237)
chr1 (1-80)||(19008727-19008806)
chr1 (1-79)||(20371039-20371115)
chr1 (1-80)||(50949542-50949621)
chr1 (1-79)||(49284408-49284486)
chr1 (2-78)||(49318421-49318496)
chr1 (1-80)||(44911414-44911493)
chr1 (1-79)||(39691977-39692055)
chr1 (1-78)||(47498301-47498376)
chr1 (8-73)||(32162734-32162799)
chr1 (33-79)||(50615239-50615285)
chr1 (33-79)||(50623067-50623113)
chr1 (1-78)||(6002237-6002314)
chr1 (26-79)||(8108995-8109048)
chr1 (26-79)||(47955305-47955358)
chr1 (16-79)||(19007734-19007796)
chr1 (1-75)||(44224096-44224169)
chr1 (26-78)||(48190771-48190823)
chr1 (1-76)||(6002871-6002946)
chr1 (24-75)||(22149699-22149750)
chr1 (26-77)||(47498497-47498547)
chr1 (26-76)||(17518604-17518653)
chr1 (26-80)||(39690792-39690846)
chr1 (26-80)||(48191357-48191411)
chr1 (26-79)||(13589661-13589713)
chr1 (1-50)||(49285032-49285081)
[»] chr8 (46 HSPs)
chr8 (1-79)||(41662520-41662598)
chr8 (1-80)||(37396706-37396785)
chr8 (1-79)||(17431286-17431364)
chr8 (1-79)||(24473745-24473823)
chr8 (1-78)||(37397122-37397199)
chr8 (1-80)||(6199073-6199152)
chr8 (1-79)||(20861615-20861693)
chr8 (1-75)||(34498125-34498199)
chr8 (12-80)||(34498543-34498611)
chr8 (1-80)||(13026633-13026712)
chr8 (2-80)||(15444625-15444703)
chr8 (14-76)||(25438794-25438856)
chr8 (1-75)||(25439103-25439176)
chr8 (1-78)||(9623502-9623579)
chr8 (1-78)||(24473343-24473420)
chr8 (2-78)||(16169174-16169249)
chr8 (1-79)||(9823338-9823416)
chr8 (1-79)||(13936722-13936799)
chr8 (1-78)||(39724025-39724102)
chr8 (1-80)||(6198656-6198735)
chr8 (2-80)||(2856524-2856602)
chr8 (1-75)||(13027258-13027332)
chr8 (1-55)||(33727082-33727136)
chr8 (1-78)||(16169584-16169661)
chr8 (24-79)||(12281123-12281178)
chr8 (1-80)||(13937366-13937445)
chr8 (1-78)||(9822748-9822825)
chr8 (1-78)||(22851390-22851467)
chr8 (26-78)||(41662405-41662457)
chr8 (1-76)||(15444213-15444288)
chr8 (26-76)||(765736-765786)
chr8 (1-78)||(3307338-3307415)
chr8 (34-78)||(3463955-3463999)
chr8 (26-78)||(15156187-15156239)
chr8 (26-78)||(37752084-37752136)
chr8 (1-80)||(15042143-15042222)
chr8 (33-76)||(33726696-33726739)
chr8 (26-80)||(15155881-15155935)
chr8 (26-80)||(16928940-16928994)
chr8 (24-78)||(43162234-43162287)
chr8 (8-78)||(9623864-9623935)
chr8 (33-78)||(23123338-23123383)
chr8 (1-50)||(39723430-39723479)
chr8 (26-79)||(43246178-43246231)
chr8 (26-78)||(16929244-16929296)
chr8 (26-78)||(37752418-37752470)
[»] chr2 (40 HSPs)
chr2 (1-79)||(37720203-37720281)
chr2 (1-75)||(8851151-8851225)
chr2 (1-79)||(8851559-8851637)
chr2 (1-76)||(6325324-6325399)
chr2 (1-80)||(7664246-7664325)
chr2 (1-75)||(26692797-26692871)
chr2 (1-78)||(7664650-7664727)
chr2 (1-78)||(16910827-16910904)
chr2 (1-78)||(17850978-17851054)
chr2 (1-80)||(5378659-5378738)
chr2 (1-71)||(6324924-6324994)
chr2 (1-77)||(16911246-16911321)
chr2 (1-77)||(18750103-18750178)
chr2 (1-80)||(5379936-5380015)
chr2 (1-80)||(41790889-41790968)
chr2 (1-75)||(26692399-26692473)
chr2 (1-80)||(7979565-7979642)
chr2 (3-79)||(7979982-7980057)
chr2 (1-80)||(2639459-2639538)
chr2 (1-80)||(26841585-26841664)
chr2 (1-79)||(2638819-2638897)
chr2 (1-75)||(5793450-5793524)
chr2 (1-79)||(17851379-17851457)
chr2 (6-76)||(19141446-19141515)
chr2 (1-78)||(38490818-38490894)
chr2 (1-75)||(19141826-19141898)
chr2 (1-75)||(41790494-41790567)
chr2 (1-78)||(26842215-26842292)
chr2 (1-77)||(18296077-18296153)
chr2 (1-75)||(7591204-7591278)
chr2 (26-80)||(30190921-30190975)
chr2 (33-79)||(43495308-43495354)
chr2 (26-79)||(20347466-20347519)
chr2 (26-79)||(6171458-6171511)
chr2 (1-78)||(7591827-7591904)
chr2 (26-79)||(11883622-11883675)
chr2 (26-79)||(18296695-18296748)
chr2 (26-79)||(24832330-24832383)
chr2 (26-78)||(11883928-11883980)
chr2 (28-78)||(43495609-43495658)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-78)||(185251-185328)
scaffold0017 (1-77)||(184840-184916)
[»] chr6 (26 HSPs)
chr6 (1-78)||(10087835-10087912)
chr6 (1-78)||(33974276-33974353)
chr6 (9-79)||(7654533-7654603)
chr6 (1-75)||(32733973-32734047)
chr6 (2-79)||(29074350-29074426)
chr6 (2-79)||(29079114-29079190)
chr6 (2-79)||(29106923-29106999)
chr6 (1-77)||(22755066-22755142)
chr6 (1-80)||(33829613-33829692)
chr6 (1-79)||(13177033-13177110)
chr6 (1-78)||(22684335-22684411)
chr6 (1-78)||(22754657-22754733)
chr6 (1-78)||(33828990-33829067)
chr6 (1-79)||(2354787-2354865)
chr6 (26-80)||(3403991-3404045)
chr6 (1-75)||(33973867-33973941)
chr6 (2-78)||(2354409-2354484)
chr6 (26-78)||(3403717-3403769)
chr6 (1-56)||(32733579-32733634)
chr6 (15-57)||(403669-403711)
chr6 (26-80)||(10039674-10039727)
chr6 (26-80)||(13579653-13579706)
chr6 (26-75)||(3825530-3825578)
chr6 (26-79)||(18241853-18241906)
chr6 (26-78)||(11656784-11656836)
chr6 (24-80)||(21032280-21032336)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-79)||(329-407)
scaffold0460 (1-78)||(740-816)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-79)||(19620-19697)
scaffold0176 (12-80)||(20031-20099)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-79)||(38672-38750)
scaffold0041 (1-45)||(38284-38328)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-79)||(9904-9983)
scaffold0029 (16-80)||(10311-10373)
[»] scaffold0069 (2 HSPs)
scaffold0069 (1-78)||(50483-50560)
scaffold0069 (1-79)||(50074-50150)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-78)||(6772-6849)
scaffold0328 (1-78)||(6152-6229)
[»] scaffold0110 (1 HSPs)
scaffold0110 (26-80)||(45809-45862)
[»] scaffold0001 (2 HSPs)
scaffold0001 (33-79)||(183671-183717)
scaffold0001 (26-78)||(438930-438982)
[»] scaffold0319 (2 HSPs)
scaffold0319 (26-79)||(6393-6446)
scaffold0319 (26-78)||(6699-6750)
[»] scaffold0192 (1 HSPs)
scaffold0192 (26-79)||(25371-25424)
[»] scaffold0802 (1 HSPs)
scaffold0802 (26-78)||(1422-1474)


Alignment Details
Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 89 - 209
Target Start/End: Complemental strand, 29379681 - 29379562
Alignment:
Q  89 atggaaaaaaggaataagtttatcggttttctctgaaccagatttgcggtttgtttaccctctgtaaaccacttttattctgcatgaatcggttcttcct 188  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29379681 atggaaaaaaggaata-gtttatcggttttctctgaaccagatttgcggtttgtttaccctctgtaaaccacttttattctgcatgaatcggttcttcct 29379583  T
Q  189 tccatgacagactcatctttt 209  Q
    |||||||||||||||||||||    
T  29379582 tccatgacagactcatctttt 29379562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28196750 - 28196828
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  28196750 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32703627 - 32703704
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  32703627 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25161955 - 25161879
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  25161955 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 292859 - 292780
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  292859 caaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9380718 - 9380797
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9380718 caaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 9380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28196423 - 28196344
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  28196423 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 28196344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39744442 - 39744521
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  39744442 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 32703302 - 32703224
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  32703302 caaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 32703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4239343 - 4239420
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  4239343 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9380384 - 9380307
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9380384 caaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9023321 - 9023242
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  9023321 caaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagccta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 293194 - 293272
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| || ||||||||||||||||||    
T  293194 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9023657 - 9023735
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  9023657 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 169416 - 169493
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  169416 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39086600 - 39086677
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | | ||||||||||||||||||    
T  39086600 caaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 169091 - 169012
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgg-gaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| || |||||||||||||||||||    
T  169091 caaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcct 169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 26207723 - 26207801
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  26207723 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcct 26207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 48406038 - 48405961
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  48406038 caaaatcgctcgtttaaaactatggggtgcaaaattgcataattggcaaactatagg-gggaaaagtgcaattaagcct 48405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 43292334 - 43292411
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  43292334 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagcc 43292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 23540230 - 23540306
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||| | ||||||||||||||||||    
T  23540230 aaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 43292114 - 43292038
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |  ||||||||||||||||    
T  43292114 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44468900 - 44468956
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactatagg 57  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44468900 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagg 44468956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39744107 - 39744028
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||| |||| |||| | |||||||||||||| |||||||||| || |||||||||||||||||||    
T  39744107 caaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagccta 39744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26207437 - 26207360
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  26207437 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactatagg-ggggaaagtgcaattaagcct 26207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23539916 - 23539839
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||| |||||| |||||||| |||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  23539916 caaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaactatag--ggggaaagtgcaattaagccta 23539839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 50678856 - 50678777
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  50678856 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12757843 - 12757788
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactatag 56  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  12757843 caaaatcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaactatag 12757788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 48406362 - 48406425
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaa 64  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||| |||||| ||||||    
T  48406362 caaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaattataggggggaaa 48406425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 56505770 - 56505691
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||  |||||| |||| |||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  56505770 caaaatagctcaattaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36095894 - 36095816
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||| |||||||||||||    
T  36095894 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 36096452 - 36096526
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | |||||||||||||||    
T  36096452 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50679401 - 50679478
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||| ||||||||||||  ||||| | ||||||||||||||||||    
T  50679401 caaaatcgctcgtttaaaaacatggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43051229 - 43051307
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||  ||| |||||| |||| |||||||||||||  ||||| | ||||| |||||||||||||    
T  43051229 caaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 39912130 - 39912053
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||| ||||||||||||||| | || | ||||||||||||   ||||||||||  ||||||||||||||||||||    
T  39912130 caaaatcgttcgtttaaaactatg-gatgtaaaatcgcacaattaataaactatagggaggaaaagtgcaattaagcct 39912053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 24775785 - 24775838
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||| ||||  ||||| |||||||||||||||||||||    
T  24775785 ggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcct 24775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39912464 - 39912540
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||| |||||||||||||||| | |||| |||||||||||||  |||||||| |  ||||||||| |||||||||    
T  39912464 caaaatcactcgtttaaaactatgggatgcaaaatcgcacaattgataaactata-gaaggaaaagtgtaattaagcc 39912540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25162290 - 25162346
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactatagg 57  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||| |||| ||||||    
T  25162290 caaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaatatagg 25162346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 45830173 - 45830252
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||| |||||||  ||| |||| | ||||||||||||| ||||  ||||| | ||||||||| ||||||||||    
T  45830173 caaaatcgctcttttaaaaacatggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagccta 45830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 3930482 - 3930535
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  3930482 ggtgcaaaatcgcacaattagcaaaagatagg-gggaaaagtgcaattaagccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43050684 - 43050610
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||| |||||||||||  ||| |||||| |||||||||||||| |||  |||||   |||||||||||||||    
T  43050684 caaaatcactcgtttaaaaacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaa 43050610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 13198908 - 13198961
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||  ||||  ||||| |||||||||||||||||||||    
T  13198908 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 18077204 - 18077257
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  ||||| | |||||||||||||||||||    
T  18077204 ggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcct 18077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 8182044 - 8181992
Alignment:
Q  26 ggtgcataatcgcacaattggc-aaactataggtgggaaaagtgcaattaagc 77  Q
    |||||| ||||||||||||||| |||| ||||| || ||||||||||||||||    
T  8182044 ggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11529245 - 11529169
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    ||||||||| || ||||||  ||| |||||| |||| |||||||||||||   ||||  ||||||||||||||||||    
T  11529245 caaaatcgcacgattaaaaacatggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12758181 - 12758237
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactatagg 57  Q
    |||||| |||||||||||||||||  ||||| || | || |||||||||||||||||    
T  12758181 caaaattgctcgtttaaaactatggcgtgcaaaaacacataattggcaaactatagg 12758237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 16555819 - 16555871
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||| | ||||||||||||||||||||    
T  16555819 ggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 49178818 - 49178866
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaatta 74  Q
    |||||| ||||||||||||||||||  ||||| | ||||||||||||||    
T  49178818 ggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 10533111 - 10533032
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10533111 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37889236 - 37889315
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37889236 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 37889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 37972373 - 37972451
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  37972373 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37972451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9035270 - 9035347
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9035270 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37888910 - 37888833
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  37888910 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 20418965 - 20418886
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  20418965 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20419301 - 20419379
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  20419301 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 20419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 22740233 - 22740155
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  22740233 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 18864379 - 18864457
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  18864379 caaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtacaattaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37972037 - 37971958
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  37972037 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagccta 37971958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3205070 - 3205148
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||| | |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  3205070 caaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 3205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13744210 - 13744287
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  13744210 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagcct 13744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17157044 - 17156966
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  17157044 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18864044 - 18863970
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  18864044 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13741634 - 13741557
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||| ||||||| ||||||||||||    
T  13741634 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9034945 - 9034865
Alignment:
Q  1 caaaatcgctcgtttaaaactatgagg-tgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| || |||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  9034945 caaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 48359395 - 48359320
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  48359395 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22740568 - 22740641
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  22740568 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 29292999 - 29292921
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||| |||| ||| | |||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  29292999 caaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 29292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38826890 - 38826968
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||| || |||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  38826890 caaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcct 38826968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3204744 - 3204669
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||| ||||||||||||||||    
T  3204744 caaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatag--ggggaaagtgcaattaagcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29293323 - 29293400
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||| |||| |||  ||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  29293323 caaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36527775 - 36527852
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| | |||| ||||||| ||||||||||||||| | ||||||| ||||||||||||    
T  36527775 caaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaagcc 36527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 42419005 - 42419084
Alignment:
Q  1 caaaatcgctcgtttaaaactat-gaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||| | |||||| || |||||||||||||||||||||| ||||||||||||||||| ||||    
T  42419005 caaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactatagg-gggaaaagtgcaattaaaccta 42419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 48359635 - 48359713
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||| || ||||||||||||| |||||    
T  48359635 caaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattggtaaactatagg-ggaaaaagtgcaattatgccta 48359713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13863934 - 13864011
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||  ||||| | |||||||||||||||||||    
T  13863934 caaaatcgctcgtttaaaaatatggggtgca-aatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42418668 - 42418590
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||  | | || |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  42418668 caaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaagcct 42418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44600112 - 44600190
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | |||||||||||||||||||    
T  44600112 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44599566 - 44599489
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||    
T  44599566 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13863390 - 13863311
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||| ||||||||||||||    
T  13863390 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 13863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 16198967 - 16199032
Alignment:
Q  14 ttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||| |||||| |||||||||||||||||||||||   || ||||||||||||||||||    
T  16198967 ttaaaactatggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 36527451 - 36527387
Alignment:
Q  10 tcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||| || ||||||||||||||    
T  36527451 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-ggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 46816288 - 46816367
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||| |||| |||||| ||||||| |||||| |||  ||||  || |||||||||||||||||||    
T  46816288 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagccta 46816367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 9412327 - 9412381
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  9412327 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 9412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 3687658 - 3687710
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||||    
T  3687658 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 8643743 - 8643822
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||| |  ||| |||||| |||||||||||||| |||  |||||   ||||||||||||||||||||    
T  8643743 caaaatcgctcgtttaataacatggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagccta 8643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 13772903 - 13772955
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  13772903 ggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12498644 - 12498565
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12498644 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26571141 - 26571220
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26571141 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12498905 - 12498984
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12498905 caaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 43464169 - 43464247
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  43464169 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 21207303 - 21207229
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  21207303 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26570806 - 26570727
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  26570806 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34147487 - 34147565
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| || ||||||||||||||||||    
T  34147487 caaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 34147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37610278 - 37610201
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  37610278 caaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagg-gggaaaagtgcaattaagcct 37610201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37780396 - 37780319
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  37780396 caaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactatagg-gggaaaagtgcaattaagcct 37780319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3888316 - 3888239
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||| |||||| |||||||||||||    
T  3888316 caaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaagcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37780719 - 37780796
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||    
T  37780719 caaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22729417 - 22729492
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||||||||||||||    
T  22729417 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattatagg-gggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19514603 - 19514525
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactata-ggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| || ||| ||||||||||||||||    
T  19514603 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaagcc 19514525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 19514948 - 19515018
Alignment:
Q  9 ctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  19514948 ctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43463832 - 43463759
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  43463832 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataag-gggaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22729084 - 22729008
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||  ||||||||||| ||||||||||||||||||||    
T  22729084 caaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactatagg-gggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2817226 - 2817152
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||||||||||| |||| | |||| |||||||||||||||||||||||||  ||||||||||||||||    
T  2817226 caaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3888639 - 3888713
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||| |||| | |||||||||||||||||    
T  3888639 caaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 10098919 - 10098996
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||  |||||||||||||||| ||||    
T  10098919 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-aggaaaagtgcaattaaaccta 10098996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10098596 - 10098519
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||  | |||| ||||||||||||| ||||||||||| || |||||||||||||||||    
T  10098596 caaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagcc 10098519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37610595 - 37610671
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| ||| ||||| ||||||||||    
T  37610595 caaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactatagg-ggggaaagtacaattaagcc 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25940991 - 25941067
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| | |||| ||||||| ||||  ||||||||||| |||||||||||||||||||    
T  25940991 caaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 11351405 - 11351483
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||| |||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||| ||||    
T  11351405 aaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 25940598 - 25940520
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||  |||||| ||||||||||||| ||||||||||| |  |||| |||||||||||||    
T  25940598 caaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcct 25940520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18817588 - 18817665
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||    
T  18817588 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2817552 - 2817626
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    |||||||||||||||||||||||  | || | |||||||||||| |||||||||||| ||||||||||||||||||    
T  2817552 caaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactatagg-gggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18817029 - 18816950
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||| ||||||||||||||    
T  18817029 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 18816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34147216 - 34147140
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||| | |||||| |||||||||||||  ||||||||   |||||||||||||||||||||    
T  34147216 caaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgataaactata--agggaaaagtgcaattaagcct 34147140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 31569983 - 31569905
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||| |||||||||||  |||||||||| ||||||||||||| ||||  ||||| ||||||||||||||||| ||||    
T  31569983 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagatagg-gggaaaagtgcaattaaaccta 31569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41072191 - 41072269
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||  |||||| ||||| ||||||| |||||||||||  ||||||||| |||||| ||||    
T  41072191 caaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaactatagg-aggaaaagtgtaattaaaccta 41072269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 11316791 - 11316717
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||| |||||||||||| |||  | |||| ||| | ||||||||||||||||||| |||||||||||||||||    
T  11316791 caaaattgctcgtttaaaattataggatgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11350884 - 11350807
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||| |||| |||||| ||| ||||||||||||||  ||||| | ||||| |||||||||||||    
T  11350884 caaaatcgctcgtttaaaaatatggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagcct 11350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30401959 - 30401885
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||| ||||||||||||| | |||| ||| | ||||||||||||||||||   ||||||||||||||||    
T  30401959 caaaatcgctagtttaaaactatgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaa 30401885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 16466746 - 16466798
Alignment:
Q  28 tgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||| |||||||||||| ||||| |||||| ||||||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagccta 16466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11316951 - 11317025
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||| |||||||| ||| |||||| |||||||||||||||||| || ||  |  ||||||||||||||    
T  11316951 caaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaagtacagaggaaaaaagtgcaattaa 11317025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 25115809 - 25115755
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||| |||||||||||||  ||||| ||||||||||||||||||||||    
T  25115809 ggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 25174901 - 25174847
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||| |||||||||||||  ||||| ||||||||||||||||||||||    
T  25174901 ggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42919381 - 42919304
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||  ||| |||| | |||||||||||||| ||| |||||| || ||||| ||||||||||||    
T  42919381 caaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaatatagg-ggaaaaagagcaattaagcct 42919304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 18433067 - 18433015
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  18433067 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 25116063 - 25116117
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||  ||||  ||||| ||||||||||||||||||||||    
T  25116063 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25116117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 25175153 - 25175207
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||  ||||  ||||| ||||||||||||||||||||||    
T  25175153 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 25175207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 18433318 - 18433371
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||  ||||  ||||| |||||||||||||||||||||    
T  18433318 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 26020502 - 26020449
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  |||||  ||||||||||||||||||||    
T  26020502 ggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 16726132 - 16726084
Alignment:
Q  24 gaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaat 72  Q
    |||||||| ||||||||||||||||||  ||||| || |||||||||||    
T  16726132 gaggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 48159974 - 48159895
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48159974 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 48159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48160310 - 48160387
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  48160310 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 53687964 - 53687887
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  53687964 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 53687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3353528 - 3353606
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  3353528 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaactaaaccta 3353606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 27238542 - 27238463
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  27238542 caaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 40848938 - 40849017
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  40848938 caaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagccta 40849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27238877 - 27238951
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  27238877 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 40848597 - 40848520
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  40848597 caaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcct 40848520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10348776 - 10348853
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | || |||||||||||||||||    
T  10348776 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagcc 10348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 42673054 - 42672978
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  42673054 caaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42673273 - 42673349
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  42673273 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 3353202 - 3353128
Alignment:
Q  3 aaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  3353202 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26007258 - 26007181
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  26007258 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaagcct 26007181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 53766240 - 53766166
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| || ||||||||||||||    
T  53766240 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 24485437 - 24485513
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  24485437 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gagaaaagtgcaattaagcc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47666312 - 47666389
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||| |||| ||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  47666312 caaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 22429573 - 22429647
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||| ||||||||||||||    
T  22429573 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggaggg-aaagtgcaattaag 22429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26007596 - 26007675
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||| || |||||||||||||| ||||    
T  26007596 caaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaaaccta 26007675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 36180968 - 36181046
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||| ||| || ||||||||||||  |||||||||||  |||||||||||||||||||||    
T  36180968 aaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 22429235 - 22429159
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||  |||||| | |||||||||||||||| |||||| | |||||||||||||||||    
T  22429235 caaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 44008379 - 44008454
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||   ||||||||||||||||||    
T  44008379 aaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagg-atgaaaagtgcaattaagcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 36180631 - 36180555
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||  |||||| ||||||||||||||    
T  36180631 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatag--gggaaatgtgcaattaagcct 36180555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 24485096 - 24485042
Alignment:
Q  3 aaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactatagg 57  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  24485096 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagg 24485042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 47665987 - 47665909
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||| |||| |||||||||| ||||||||||||| ||||||||| | || |||||||||||||||||||    
T  47665987 aaaatcactcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 53688280 - 53688356
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||| ||  ||||||||||||||||    
T  53688280 caaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaactatagg-ggagaaagtgcaattaagcc 53688356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 42456172 - 42456247
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||  |||| |||  ||| ||||||||||||||||    
T  42456172 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggggaactttag--ggggaaagtgcaattaagcc 42456247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 42455853 - 42455788
Alignment:
Q  15 taaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||  || ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  42455853 taaaactatagggggcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44008044 - 44007967
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||| || |||| | | |||||||||  ||||||||||  |||||||||||||||||||    
T  44008044 caaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 44007967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 53766569 - 53766634
Alignment:
Q  14 ttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||  |||||| ||| |||||||| |||||||||||| |||||||||||||||||||||    
T  53766569 ttaaaactatagggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcct 53766634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8314090 - 8314013
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||| |||||||||  ||  |||||| ||||||||||||| |||| |||||| | ||||||||||||||||||    
T  8314090 caaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21896488 - 21896564
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||| |||||| ||| |||||| ||||||||||||| |||| |||||| || |||| ||||||||||||    
T  21896488 caaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatatagg-ggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 10348556 - 10348480
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    ||||||||||||||||||| |||| | |||| ||| | ||||||| ||||||||| | | |||||||||||||||||    
T  10348556 caaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaagc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 20969021 - 20969073
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||||    
T  20969021 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 1928419 - 1928489
Alignment:
Q  9 ctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||| |||| |||||| ||||||||||||||||||  |||||  |||||| ||||||||| ||||    
T  1928419 ctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagatagggaggaaaa-tgcaattaaaccta 1928489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 8315084 - 8315137
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||| |||| |||||| ||| ||||||||||||||||||    
T  8315084 ggtgcaaaatcgcacaattgacaaaatatagg-ggggaaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 47871124 - 47871176
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  ||||| |||||||||||||||||||||    
T  47871124 ggtgcaaaatcgcacaattagcaaaagatagg-gggaaaagtgcaattaagcct 47871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 1927824 - 1927772
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||| ||||||||||  ||||| |||||| |||||||||||||    
T  1927824 ggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 10293911 - 10293963
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||  ||||  ||||| ||||||||||||||||||||    
T  10293911 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32163020 - 32163099
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32163020 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9347203 - 9347126
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9347203 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6703537 - 6703458
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| || |||||||||||||||||||    
T  6703537 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagccta 6703458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 42611262 - 42611188
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  42611262 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 50430058 - 50430132
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  50430058 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13918523 - 13918446
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  13918523 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagcc 13918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27172192 - 27172116
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  27172192 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48105093 - 48105170
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | ||||||||||||||||||||    
T  48105093 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13918844 - 13918920
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  13918844 caaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26815096 - 26815175
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| |||||||||||||  |||||||||| ||||||||||||||||||||||    
T  26815096 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28633797 - 28633718
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  28633797 caaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagccta 28633718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 50526449 - 50526524
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||||||||||    
T  50526449 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20480244 - 20480167
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  20480244 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 46823920 - 46823846
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  46823920 caaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 46824255 - 46824333
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  46824255 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcct 46824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48104755 - 48104681
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  48104755 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 4692411 - 4692488
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  4692411 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcct 4692488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6703871 - 6703948
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| | ||||||||||||||||||    
T  6703871 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagcc 6703948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26814771 - 26814694
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||  |||||||||||||||||||    
T  26814771 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 999502 - 999580
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  999502 caaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctatagg-gggaaaagtgcaattaagccta 999580  T

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Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9347528 - 9347606
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  9347528 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagg-ggggaaagtgcaattaagccta 9347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 20480591 - 20480665
Alignment:
Q  3 aaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  20480591 aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 28634134 - 28634213
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  28634134 caaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 28634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 42611591 - 42611665
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  42611591 caaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21687102 - 21687025
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| |||  |||||||| ||||||||||| ||||||||||||||||||||    
T  21687102 caaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50615598 - 50615674
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  50615598 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50623426 - 50623502
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  50623426 caaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 21687445 - 21687520
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||| ||||||||    
T  21687445 aaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaattatagg-gggaaaagtgctattaagcc 21687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 49317827 - 49317752
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||| | |||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  49317827 aaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 44911102 - 44911023
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||| |||| ||| |||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  44911102 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagccta 44911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 999188 - 999115
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  999188 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactatagg-gggaaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20371329 - 20371406
Alignment:
Q  1 caaaatcgctcgtttaaaactatgagg-tgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  20371329 caaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 27172518 - 27172596
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||||||| || ||| |||||||||||||||||||||    
T  27172518 caaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcct 27172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50429733 - 50429655
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||   ||||||||| |||||||||||    
T  50429733 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcct 50429655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49318143 - 49318219
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||| |||||||| | |||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  49318143 caaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactatagg-ggggaaagtgcaattaagcc 49318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 50949237 - 50949164
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||| |||||||| ||||||||| |||||||    
T  50949237 aaaatcgctcgttttaaacaatgaggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaa 50949164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19008727 - 19008806
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| || ||||| |||||||| |||||| |||||||||||||  |||||||||| ||||||||||||||||||||||    
T  19008727 caaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagccta 19008806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20371115 - 20371039
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||  ||| |||||||||||||||||    
T  20371115 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactatag--ggggaaagtgcaattaagcct 20371039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 50949542 - 50949621
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||| |||| ||||| |||| ||||||||||||| ||||||||||| ||| |||||||||||| |||||    
T  50949542 caaaatcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgccta 50949621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 49284486 - 49284408
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | |||||||||||||||||||    
T  49284486 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 49284408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 49318421 - 49318496
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||| | |||| |||||||||||||  |||||||||| ||||||| ||||||||||||    
T  49318421 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactatagg-gggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44911414 - 44911493
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||| |||| ||  |||||| ||||||||||||||||||||||||| || |||| ||||||||| ||||    
T  44911414 caaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaaaccta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 39691977 - 39692055
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||| | |||||||||  ||| |||||| ||||||||||||| |||| |||||| |||||||||||||||||||||    
T  39691977 caaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47498376 - 47498301
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||| ||||||||||||| | |||| ||| ||||||||||||||||||||  ||| ||||||||||||||||    
T  47498376 caaaatcgcttgtttaaaactatgggatgcaaaattgcacaattggcaaactatag--ggggaaagtgcaattaagcc 47498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 32162799 - 32162734
Alignment:
Q  8 gctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaatt 73  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||||||  | ||||||||||||    
T  32162799 gctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaagaaaaagtgcaatt 32162734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 50615285 - 50615239
Alignment:
Q  33 aatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  50615285 aatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50615239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 50623113 - 50623067
Alignment:
Q  33 aatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  50623113 aatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6002314 - 6002237
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| |||| |||||||| ||||  ||||| | ||||||||||||||||||    
T  6002314 caaaatcgctcgtttaaaaacatggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 8108995 - 8109048
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||||||||  ||||| |||||||||||||||||||||    
T  8108995 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 47955358 - 47955305
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||||||||  ||||| |||||||||||||||||||||    
T  47955358 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 19007796 - 19007734
Alignment:
Q  16 aaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||  || ||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  19007796 aaaactatagggggcaaaatcgcacaattggcaaactatagg-ggggaaagtgcaattaagcct 19007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 44224096 - 44224169
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| | |||| |||| ||||||||| |||||| | | ||| |||||||||||||    
T  44224096 caaaatcgctcgtttaaaactatgggatgcaaaatcacacaattggtaaactacatg-gggcaaagtgcaattaa 44224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 48190823 - 48190771
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||    
T  48190823 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6002871 - 6002946
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    |||||||||||||||||||  ||| |||||| |||||||||||||  |||  |||||   ||||||||||||||||    
T  6002871 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaag 6002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 22149699 - 22149750
Alignment:
Q  24 gaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||| |||||||||||| |||||  ||||| |||||||||||||||||    
T  22149699 gaggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 47498497 - 47498547
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||| || |||||||||| ||||||||||| |||||||||||||||||||    
T  47498497 ggtgcaaaaccgcacaattgacaaactatagg-gggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 17518604 - 17518653
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||    
T  17518604 ggtgcaaaatcgcacaattggcaaaagatagg-gggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 39690846 - 39690792
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||||| || |||||| || |||||||||| ||||||||    
T  39690846 ggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagccta 39690792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 48191357 - 48191411
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||||||| |||||||||  ||||| | ||||||||||||||||||||    
T  48191357 ggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagccta 48191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 13589661 - 13589713
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  ||||| |||||||||||||||||||||    
T  13589661 ggtgcaaaatcgcacaattagcaaaagatagg-gggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49285032 - 49285081
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaa 50  Q
    |||||||||| ||||||||  ||| |||||| ||||||||||||||||||    
T  49285032 caaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 49285081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 41662598 - 41662520
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||    
T  41662598 caaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcct 41662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 37396785 - 37396706
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  37396785 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagccta 37396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17431364 - 17431286
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||||||||||||| | ||||||||||||| ||||||||| | |||||||||||||||||||||    
T  17431364 caaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcct 17431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24473745 - 24473823
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||   |||||||||||||||||||    
T  24473745 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcct 24473823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37397122 - 37397199
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||| ||||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  37397122 caaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 6199073 - 6199152
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||   ||||||||||||||||||||    
T  6199073 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagccta 6199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 20861615 - 20861693
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| || |||| |||||||||||||    
T  20861615 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcct 20861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34498199 - 34498125
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| || ||||||||||||||    
T  34498199 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 34498543 - 34498611
Alignment:
Q  12 gtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||| ||||||||||||||||||||||    
T  34498543 gtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagccta 34498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13026712 - 13026633
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  13026712 caaaatcgctcgtttaaaaacatgaggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 15444625 - 15444703
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| ||| |||||| || |||||||||||||| ||||    
T  15444625 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaaccta 15444703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 25438856 - 25438794
Alignment:
Q  14 ttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  25438856 ttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25439103 - 25439176
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| || ||||||||||||||    
T  25439103 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-ggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9623579 - 9623502
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||   | |||||||||||||||||    
T  9623579 caaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagcc 9623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24473420 - 24473343
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||| ||||||| |||| |||||| |||| |||||||||||||||||||| || |||||||||||||||||    
T  24473420 caaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 16169249 - 16169174
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||   ||||||||||||||||||    
T  16169249 aaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactatagg-atgaaaagtgcaattaagcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9823338 - 9823416
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | |||||||||||||||||||    
T  9823338 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13936799 - 13936722
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||| |||| |||||| |||||||||||||| |||  ||||| |||||||||||||||||||||    
T  13936799 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggtaaaagatagg-gggaaaagtgcaattaagcct 13936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39724025 - 39724102
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||    
T  39724025 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 6198735 - 6198656
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||  |||||| |||||||||||||| | || ||| | | ||||||||||||||||||||    
T  6198735 caaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaattaagccta 6198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 2856602 - 2856524
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||  ||||| |||||||| |||||| |||||||||||||||||||||||||  |||||| | ||||||||||||    
T  2856602 aaaatcgaacgttttaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagccta 2856524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 13027258 - 13027332
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | |||||||||||||||    
T  13027258 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33727082 - 33727136
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactata 55  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  33727082 caaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactata 33727136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16169584 - 16169661
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||||||| || |||| | | |||||||||  ||||||||||  |||||||||||||||||||    
T  16169584 caaaatcgctcgtttaaaactataagatgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 16169661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 12281178 - 12281123
Alignment:
Q  24 gaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||    
T  12281178 gaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13937366 - 13937445
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||| |||||||||||  ||| |||||| | ||||||||||| ||||  ||||| ||||||||||||||||||||||    
T  13937366 caaaatcactcgtttaaaaacatggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagccta 13937445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9822825 - 9822748
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| |||||||||||||  |||  ||||| | ||||||||||||||||||    
T  9822825 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22851467 - 22851390
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||| ||||||||  ||| |||||| ||||||||||||| ||||  ||||| | ||||||||||||||||||    
T  22851467 caaaatcgcttgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 41662405 - 41662457
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||||    
T  41662405 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15444288 - 15444213
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    ||||||||||||||||||||||||   || | ||| | ||||||||||||||||||  ||||||| ||||||||||    
T  15444288 caaaatcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 765786 - 765736
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||    
T  765786 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 3307415 - 3307338
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||| |||||||| |||| | |||| ||||||||||||| ||||  ||||| | ||||| ||||||||||||    
T  3307415 caaaatcgcttgtttaaaaatatgggatgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 3463955 - 3463999
Alignment:
Q  34 atcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  3463955 atcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 15156187 - 15156239
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||| ||||  ||||| ||||||||||||||||||||    
T  15156187 ggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

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Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 37752136 - 37752084
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  37752136 ggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 15042222 - 15042143
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||| |||||||| ||  |||||| |||| |||||||||||||  ||| | ||| ||||||||||||| ||||    
T  15042222 caaaatcgctcatttaaaacaatagggtgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaaaccta 15042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 33726739 - 33726696
Alignment:
Q  33 aatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    |||||||||||||| |||||||||| || |||||||||||||||    
T  33726739 aatcgcacaattggtaaactatagggggaaaaagtgcaattaag 33726696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 15155935 - 15155881
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||  ||||  ||||| ||||||||||||||||||||||    
T  15155935 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 15155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 16928994 - 16928940
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||||||||||| |||||  ||||| ||| ||||||||||||||||||    
T  16928994 ggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagccta 16928940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 43162287 - 43162234
Alignment:
Q  24 gaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||| ||||||||||||  |||| |||||| ||||||||||||||||||||    
T  43162287 gaggtgcaaaatcgcacaattaacaaaatatagg-gggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 9623864 - 9623935
Alignment:
Q  8 gctcgtttaaaactat--gaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||  | |||||| |||| ||| ||||||||||||||||   ||||||||||||||||||    
T  9623864 gctcgtttaaaactatatggggtgcaaaatcacacgattggcaaactatagg-atgaaaagtgcaattaagcc 9623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 23123383 - 23123338
Alignment:
Q  33 aatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||||||    
T  23123383 aatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39723479 - 39723430
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaa 50  Q
    |||||||||||||||||||  ||| | |||| ||||||||||||||||||    
T  39723479 caaaatcgctcgtttaaaaacatgggatgcaaaatcgcacaattggcaaa 39723430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 43246178 - 43246231
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||| ||||||| |||||  ||||| |||||||||||||||||||||    
T  43246178 ggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcct 43246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 16929244 - 16929296
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| | ||||||||||||||||||    
T  16929244 ggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 37752418 - 37752470
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||  ||||  ||||| ||||||||||||||||||||    
T  37752418 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 37720281 - 37720203
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  37720281 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8851225 - 8851151
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  8851225 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8851559 - 8851637
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8851559 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6325324 - 6325399
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||    
T  6325324 caaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7664325 - 7664246
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| |||||||||||||  |||||||||| ||||||||||||||||||||||    
T  7664325 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 7664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 26692797 - 26692871
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  26692797 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7664650 - 7664727
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||  |||||||||||||||||||    
T  7664650 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16910904 - 16910827
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| | | ||||||||||||||||||||    
T  16910904 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17851054 - 17850978
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  17851054 caaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5378738 - 5378659
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5378738 caaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 6324994 - 6324924
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaa 71  Q
    |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||| |||||||||||||    
T  6324994 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 16911246 - 16911321
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  |||||||||||||||    
T  16911246 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagg-ggcgaaagtgcaattaagc 16911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 18750103 - 18750178
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||| ||||||||||||||    
T  18750103 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagg-gggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5379936 - 5380015
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||| ||||| |||||| | |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5379936 caaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagccta 5380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41790889 - 41790968
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||||| |||| ||| || ||| |||||||||||||||||| |||||| ||||||||||||||||||||||    
T  41790889 caaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagccta 41790968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26692473 - 26692399
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||  || ||||||||||||||    
T  26692473 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 7979642 - 7979565
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||   |||||||||||||| |||||||    
T  7979642 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactata--agggaaaagtgcaataaagccta 7979565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 7979982 - 7980057
Alignment:
Q  3 aaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||| | || ||||||||||||||||||    
T  7979982 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaactata-gaggaaaaagtgcaattaagcct 7980057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2639459 - 2639538
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  2639459 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26841664 - 26841585
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  26841664 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 26841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2638897 - 2638819
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||  ||||| | ||||| |||||||||||||    
T  2638897 caaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 5793524 - 5793450
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||  | |||| ||||||||||||||||||||| | | |||||||||||||||||    
T  5793524 caaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 17851379 - 17851457
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||||||||   |  ||||||||||||||||||    
T  17851379 caaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactataaaagaaaaaagtgcaattaagcct 17851457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 19141515 - 19141446
Alignment:
Q  6 tcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaag 76  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || |||||||||||||||    
T  19141515 tcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38490818 - 38490894
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||| |||||||||| | | ||||||||||||||||    
T  38490818 caaaatcgctcgtttaaaaccatgagatgcaaaatcgcacaattggtaaactatagg-gaggaaagtgcaattaagcc 38490894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 19141826 - 19141898
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||||||| |||||||| | |||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  19141826 caaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactatag--ggggaaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41790567 - 41790494
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||| ||||||||||| ||||||| |||||||||    
T  41790567 caaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagg-gggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26842215 - 26842292
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | |||||||||| |||||||    
T  26842215 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18296153 - 18296077
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||| |||||||||    
T  18296153 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7591278 - 7591204
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||| |||||||    
T  7591278 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 30190975 - 30190921
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  30190975 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 43495354 - 43495308
Alignment:
Q  33 aatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  43495354 aatcgcacaattagcaaaatataggtgggaaaagtgcaattaagcct 43495308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 20347466 - 20347519
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||||||||  ||||| |||||||||||||||||||||    
T  20347466 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 20347519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 6171458 - 6171511
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||| |||||||||||||  ||||| |||||||||||||||||||||    
T  6171458 ggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcct 6171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7591827 - 7591904
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||| ||||  ||||| | ||||  ||||||||||||    
T  7591827 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaagcc 7591904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 11883675 - 11883622
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  ||||| |||||||||||||||||||||    
T  11883675 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 11883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 18296695 - 18296748
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||||||||  ||||| | |||||||||||||||||||    
T  18296695 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 24832383 - 24832330
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  ||||| |||||||||||||||||||||    
T  24832383 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 24832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 11883928 - 11883980
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  11883928 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 43495609 - 43495658
Alignment:
Q  28 tgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||| |||||||||||| ||||| |||||||||| ||||||||||||||||    
T  43495609 tgcaaaatcgcacaattagcaaaatataggtggg-aaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 185251 - 185328
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||    
T  185251 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 184916 - 184840
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| |||||| ||| ||||| ||| ||||||||||  | |||||||||||||||||    
T  184916 caaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaagc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10087835 - 10087912
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  10087835 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33974276 - 33974353
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  33974276 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 7654533 - 7654603
Alignment:
Q  9 ctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  7654533 ctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32733973 - 32734047
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||  ||||||||||||||||    
T  32733973 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 29074350 - 29074426
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  29074350 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagg-ggggaaagagcaattaagcct 29074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 29079114 - 29079190
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  29079114 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagg-ggggaaagagcaattaagcct 29079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 29106923 - 29106999
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  29106923 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactatagg-ggggaaagagcaattaagcct 29106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 22755066 - 22755142
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagc 77  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||   |||||||||||||||||||    
T  22755066 caaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33829613 - 33829692
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  33829613 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 13177033 - 13177110
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    ||||||||||||||||||||||||||||| | |||| |||||||| || |||||||| ||||||||||||| |||||||    
T  13177033 caaaatcgctcgtttaaaactatgaggtgtaaaatctcacaattgacatactatagg-gggaaaagtgcaactaagcct 13177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22684335 - 22684411
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||| | ||||||||||||| |||||| |||| |||||||||||||||||| | ||||||||||||||||||||    
T  22684335 caaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataag-gggaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22754733 - 22754657
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||| | ||||||||||||| |||||| |||| |||||||||||||||||| | ||||||||||||||||||||    
T  22754733 caaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataag-gggaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33829067 - 33828990
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||||||||||||||||    
T  33829067 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2354787 - 2354865
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||| |||| ||| |||||| ||||||||||||| ||||||||||  ||||||| |||||||||||||    
T  2354787 caaaatggctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcct 2354865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 3403991 - 3404045
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  3403991 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccta 3404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33973941 - 33973867
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    ||||||||||||| ||||||||| | || || |||||||||| || ||||||||||| ||||||| | |||||||    
T  33973941 caaaatcgctcgtgtaaaactataaagtacaaaatcgcacaactgacaaactataggagggaaaaatacaattaa 33973867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 2354484 - 2354409
Alignment:
Q  2 aaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||| |||| ||| | |||| ||||| |||||||  |||||||||| ||||||| ||||||||||||    
T  2354484 aaaatcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactatagg-gggaaaaatgcaattaagcc 2354409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 3403769 - 3403717
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  3403769 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32733634 - 32733579
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactatag 56  Q
    |||||| ||||||||||||||||| | |||| ||||| | ||||||||||||||||    
T  32733634 caaaattgctcgtttaaaactatgggatgcaaaatcgtataattggcaaactatag 32733579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 403711 - 403669
Alignment:
Q  15 taaaactatgaggtgcataatcgcacaattggcaaactatagg 57  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||    
T  403711 taaaactatgaggtgcaaaattgcaaaattggcaaactatagg 403669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 10039727 - 10039674
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  10039727 ggtgcaaaatcgcacaattagcaaaagatagg-gggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 13579653 - 13579706
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| |||||||||||| |||||| ||||| | ||||||||||||||||||||    
T  13579653 ggtgcaaaatcgcacaattagcaaacgatagg-gagaaaagtgcaattaagccta 13579706  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 3825578 - 3825530
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaa 75  Q
    |||||| |||||||||||| ||||| |||||| |||||||||||||||||    
T  3825578 ggtgcaaaatcgcacaattagcaaaatatagg-gggaaaagtgcaattaa 3825530  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 18241906 - 18241853
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| ||||||||||||  ||||  ||||| |||||||||||||||||||||    
T  18241906 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18241853  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 11656784 - 11656836
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| | ||||||||||||||||||    
T  11656784 ggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 21032280 - 21032336
Alignment:
Q  24 gaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||| ||| ||||||||||||  ||||  ||||| ||||||||||||||||||||||    
T  21032280 gaggcgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 21032336  T

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Target: scaffold0460 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 407 - 329
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  407 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 329  T

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Target: scaffold0460; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 740 - 816
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  740 caaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagg-ggaaaaagtgcaattaagcc 816  T

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Target: scaffold0176 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19697 - 19620
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| | ||||||| |||||||||||||    
T  19697 caaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatg-gggaaaattgcaattaagcct 19620  T

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Target: scaffold0176; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 20031 - 20099
Alignment:
Q  12 gtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  20031 gtttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagccta 20099  T

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Target: scaffold0041 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38672 - 38750
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||| |||||||| |||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  38672 caaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 38750  T

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Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38328 - 38284
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattg 45  Q
    ||||||||||| |||||||||||| | |||| |||||||||||||    
T  38328 caaaatcgctcatttaaaactatgggatgcaaaatcgcacaattg 38284  T

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Target: scaffold0029 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9983 - 9904
Alignment:
Q  1 caaaatcgctcgtttaaaactatgagg-tgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| || || | ||||||||||||||||||||||||| || ||||||||||||||||||    
T  9983 caaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 9904  T

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Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 10311 - 10373
Alignment:
Q  16 aaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    ||||||||  |||||| ||||| ||||||||||||||||||  ||||||||||| ||||||||||    
T  10311 aaaactatagggtgcaaaatcggacaattggcaaactatag--gggaaaagtgctattaagccta 10373  T

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Target: scaffold0069 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 50483 - 50560
Alignment:
Q  1 caaaatcgctcgtttaaaactatgagg-tgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  50483 caaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 50560  T

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Target: scaffold0069; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50150 - 50074
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||  ||| |||||||||||||||||    
T  50150 caaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaactatag--ggggaaagtgcaattaagcct 50074  T

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Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6772 - 6849
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||||||||||||||||  ||| |||||| ||||||||||||||||||  ||||| | ||||| ||||||||||||    
T  6772 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

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Target: scaffold0328; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6229 - 6152
Alignment:
Q  1 caaaatcgctcgtttaaaactatgaggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    ||||||||||| ||||||| |||| |||| | |||||||||||| |||||  ||||  | ||||||||||||||||||    
T  6229 caaaatcgctcatttaaaaatatggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

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Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 45809 - 45862
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagccta 80  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  45809 ggtgcaaaatcgcacaattggcaaaagatagg-gggaaaagtgcaattaagccta 45862  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 183671 - 183717
Alignment:
Q  33 aatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||||||||| ||||| |||||| |||||||||||||||||||||    
T  183671 aatcgcacaattagcaaaatataggggggaaaagtgcaattaagcct 183717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 438982 - 438930
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  438982 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 6446 - 6393
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  ||||| |||||||||||||||||||||    
T  6446 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 6699 - 6750
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| |||||||||||| |||||  ||||| ||||||||||||||||||||    
T  6699 ggtgcaaaatcgcacaattagcaaaagatagg-gggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 25371 - 25424
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcct 79  Q
    |||||| |||||||||||| |||||  ||||| |||||||||||||||||||||    
T  25371 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 1422 - 1474
Alignment:
Q  26 ggtgcataatcgcacaattggcaaactataggtgggaaaagtgcaattaagcc 78  Q
    |||||| ||||||||||||||||||  ||||| || |||||||||||||||||    
T  1422 ggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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