View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3133_low_11 (Length: 257)
Name: NF3133_low_11
Description: NF3133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3133_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 30357328 - 30357569
Alignment:
| Q |
1 |
aggaagtggcttaccttttcagattggatggccttaacagtgaagttaaattgccttctagaaggtaattgatggagtggggaagagccacaaagacctc |
100 |
Q |
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| T |
30357328 |
aggaagtggcttaccttttcagattggatggccttaacagtgaagttaaattgccttctagaaggtaattgatggagtggggaagagccacaaagtcctc |
30357427 |
T |
|
| Q |
101 |
taggtgtgaccaaaggtctagtgaagctggacttgagttggcttgccataggagaagcagctgccatgactt-aagttctgttgattccacaagtgattg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
30357428 |
taggtgtgaccaaaggtctagtgaagctggacttgagttggcttgccataggagaagcagctgccatgacttaaagttctgttgattccacaagtgattg |
30357527 |
T |
|
| Q |
200 |
aaatgagggaccagagtggctaagtacttccatagttcaatg |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
30357528 |
aaatgagggaccagagtggctaagtacttccatagttcaatg |
30357569 |
T |
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