View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3136_low_18 (Length: 299)
Name: NF3136_low_18
Description: NF3136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3136_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 13 - 284
Target Start/End: Original strand, 44067598 - 44067869
Alignment:
| Q |
13 |
ctagctgcctaatgtaagcttggcccgtaatcccgtagatagcctgacttatattcaccgctttattggacttccaaattgaatattaaagttaataatg |
112 |
Q |
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| T |
44067598 |
ctagctgcctaatgtaggcttggcccgtaatcccgtagatagcctgacttatattcaccgctttattggacttccaaattgaatattaaagttaataacg |
44067697 |
T |
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| Q |
113 |
agcaaataaatcatggagatcatttttcctaaataaaaattttggtttaagctttgatatctgtttttcggaacatatctacgtcttttcctacattgtt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44067698 |
agcaaataaatcatggagatcatttttcctaaataaaaattttggtttaagctttgatatctgtttttcggaacatatctacgtcttttcctacattgtt |
44067797 |
T |
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| Q |
213 |
ttaatttctcataaggtggtgtaattaatgatcaagtttccaaatttttaactggctcttaacctggtttgt |
284 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44067798 |
ttaatttctcgtaaggtggtgtaattaatgatcaagtttccaaatttttaactggctcttaacctggtttgt |
44067869 |
T |
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