View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3136_low_2 (Length: 736)

Name: NF3136_low_2
Description: NF3136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3136_low_2
NF3136_low_2
[»] chr2 (5 HSPs)
chr2 (17-729)||(13715194-13715904)
chr2 (388-712)||(4848480-4848802)
chr2 (143-299)||(11511160-11511316)
chr2 (158-300)||(7068492-7068635)
chr2 (388-539)||(14659002-14659154)
[»] chr3 (3 HSPs)
chr3 (388-728)||(45907960-45908296)
chr3 (144-314)||(54103189-54103359)
chr3 (173-246)||(40283671-40283744)
[»] chr8 (5 HSPs)
chr8 (562-729)||(22917219-22917379)
chr8 (395-548)||(4784994-4785148)
chr8 (594-729)||(4784136-4784274)
chr8 (387-548)||(22917026-22917186)
chr8 (662-697)||(5320150-5320185)
[»] chr5 (2 HSPs)
chr5 (391-548)||(39773695-39773853)
chr5 (617-711)||(39773556-39773650)
[»] chr6 (2 HSPs)
chr6 (142-313)||(26353346-26353504)
chr6 (197-246)||(19138395-19138444)
[»] chr4 (3 HSPs)
chr4 (388-539)||(6127068-6127220)
chr4 (443-537)||(44398274-44398368)
chr4 (393-528)||(43810833-43810969)
[»] chr1 (1 HSPs)
chr1 (151-245)||(36686618-36686712)
[»] chr7 (1 HSPs)
chr7 (173-246)||(23015165-23015238)


Alignment Details
Target: chr2 (Bit Score: 560; Significance: 0; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 560; E-Value: 0
Query Start/End: Original strand, 17 - 729
Target Start/End: Complemental strand, 13715904 - 13715194
Alignment:
Q  17 ataactgtgtttacgggtgcttacttacattagtgattttaatcattacttgatatgatgtaatatggtagaaagtgaggcaaaaacgttgcaaacaatg 116  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13715904 ataactctgtttacgggtgcttacttacattagtgattttaatcattacttgatatgatgtaatatggtagaaagtgaggcaaaaacgttgcaaacaatg 13715805  T
Q  117 ttggtgtactgttcttagttattctaagcatgtttttgggatagagtttagaataccaaaagcatggctggcgtggttaccaaagcaaatctgccgtgac 216  Q
    || |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13715804 ttagtgtacggttcttagttattctaagcatgtttttggcatagagtttagaataccaaaagcatggctggcgtggttaccaaagcaaatctgccgtgac 13715705  T
Q  217 tttattaagctaccatttggagcttttgtgtaaacgtgatacattaccgtagttttctatagaacgtggtttgtcaaaggcaatgacaaacatgctataa 316  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  13715704 tttattaagctaccatttggagcttttgtgtaaacgcgatacattaccgtggttttctatagaacgtggtttgtcaaacgcaatggcaaacatgctataa 13715605  T
Q  317 gtctataaaaacctcattgtaaatattattcagcacacatcaaattgaacaaatctttatatatctttttgggtggcatttagcttggacgagttgaaga 416  Q
    || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13715604 gtttataaaaacctcattgtaaatattattcaacacacatcaaattgaacaaatctttatatatctttttgggtggcatttagcttggacgagtagaaga 13715505  T
Q  417 attgg-ccatgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacccacaccttatctaagccatcaccaactct 515  Q
    | ||| |||||||| |||||       |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13715504 aatggtccatgatgcaccaatttttttaatgtttagattagacaatccaccaaatcttatcatactctacccacaccctatctaagccatcaccaactct 13715405  T
Q  516 atctccttcattgctctttctctctcttggtacnnnnnnnnnnnnnatatcaatactattcaacaactcccctacagtagttccattgaaatggtgatgg 615  Q
    |||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  13715404 atctccttcattgctctttctctctcttggtacttttttcatttttatatcaatactattcaacaactcccctac---agttccattgaaatggtgatgg 13715308  T
Q  616 tttcaaataagtagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatcttaagcacatacataagaacttttttata 715  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     
T  13715307 ttttaaataagtagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatcttaagtacatacacaagaacttttttatg 13715208  T
Q  716 gattattcatctca 729  Q
    ||||||||||||||    
T  13715207 gattattcatctca 13715194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 388 - 712
Target Start/End: Original strand, 4848480 - 4848802
Alignment:
Q  388 ggtggcatttagcttggacgagttgaagaattggcc-atgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacc 486  Q
    |||||||||||| |||||| ||||||||||||||   |||||||| |||       |||||||||||||| ||||||| |||||||||||||||||||||    
T  4848480 ggtggcatttagtttggactagttgaagaattggtgtatgatggatcaatttttttaatgtttagattaggcaatccatcaaatcttatcatactctacc 4848579  T
Q  487 cacaccttatctaagccatcaccaactctatctccttcattgctctttctctctcttggtacnnnnnnnnnnnnnatatcaatactattcaacaactccc 586  Q
    || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||||||||| |||||||||||||||    
T  4848580 cagactctatctaagccatcaccaactctatctccttcattgctctttctctctcttggtactttttttatttttatatcaatattattcaacaactccc 4848679  T
Q  587 ctacagtagttccattgaaatggtgatggtttcaaataagtagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatc 686  Q
    || |||| |   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4848680 ctgcagttg---cattgaaatggtgatggtttcaaataagcagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatc 4848776  T
Q  687 ttaagcacatacataagaactttttt 712  Q
    ||||||||||||| ||||||||||||    
T  4848777 ttaagcacatacacaagaactttttt 4848802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 11511316 - 11511160
Alignment:
Q  143 agcatgtttttgggatagagtttagaataccaaaagcatggctggcgtggttaccaaagcaaatctgccgtgactttattaagctaccatttggagcttt 242  Q
    ||||||| |||||  ||||||||| || |||||||||| ||||||| || ||| ||||||||| ||||||||| |||||||||||| |||||||||||||    
T  11511316 agcatgtgtttggtgtagagtttacaacaccaaaagcacggctggcatgattatcaaagcaaaactgccgtgattttattaagctagcatttggagcttt 11511217  T
Q  243 tgtgtaaacgtgatacattaccgtagttttctatagaacgtggtttgtcaaaggcaa 299  Q
    || |  ||||||||| ||| |||| |||||| ||| || |||||||| |||| ||||    
T  11511216 tgcgccaacgtgataaattgccgtggttttccataaaatgtggtttgacaaacgcaa 11511160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 158 - 300
Target Start/End: Complemental strand, 7068635 - 7068492
Alignment:
Q  158 tagagtttagaataccaaaagcatggctggcgtggttaccaaagcaaatctgccgtgactttattaagct-accatttggagcttttgtgtaaacgtgat 256  Q
    ||||||||| || |||||||||| || ||  ||| ||| ||||||||| |||  |||||||||||||||| | ||||| |||||||||||  ||||||||    
T  7068635 tagagtttacaacaccaaaagcacggttgatgtgattatcaaagcaaaactgttgtgactttattaagcttaacatttagagcttttgtgccaacgtgat 7068536  T
Q  257 acattaccgtagttttctatagaacgtggtttgtcaaaggcaat 300  Q
      ||||||||||||||||||| ||||||||||| |||| |||||    
T  7068535 gaattaccgtagttttctataaaacgtggtttgacaaacgcaat 7068492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 388 - 539
Target Start/End: Original strand, 14659002 - 14659154
Alignment:
Q  388 ggtggcatttagcttggacgagttgaagaattgg-ccatgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacc 486  Q
    |||| |||||||||||||  | |||||||||||| |||||||||| |||       |||||||||||||||| |||||  |||||||||||||||||| |    
T  14659002 ggtgccatttagcttggatcaattgaagaattggtccatgatggatcaatttttttaatgtttagattagactatccatgaaatcttatcatactctatc 14659101  T
Q  487 cacaccttatctaagccatcaccaactctatctccttcattgctctttctctc 539  Q
    |||||   |||| |||||||| |||||||||||| ||||||| ||| ||||||    
T  14659102 cacactaaatcttagccatcatcaactctatctctttcattgttctctctctc 14659154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 388 - 728
Target Start/End: Complemental strand, 45908296 - 45907960
Alignment:
Q  388 ggtggcatttagcttggacgagttgaagaattgg-ccatgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacc 486  Q
    ||||| ||||||||||||| ||||||| |||| | ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  45908296 ggtggtatttagcttggaccagttgaaaaatttgtccatgatggaccaatttttttaatgtttagattagacaatccaccaaatcttatcatactctacc 45908197  T
Q  487 cacaccttatctaagccatcaccaactctatctccttcattgctctttctctctcttggtacnnnnnnnnnnnnnatatcaatactattcaacaactccc 586  Q
    |||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||             |||||||||||||||||||||||||    
T  45908196 cacaccctatctaagccatcaccaactctatc--cttcattgctctttctctctcttggtacttttttcatttttatatcaatactattcaacaactccc 45908099  T
Q  587 ctacagtagttccattgaaatggtgatggtttcaaataagtagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatc 686  Q
    || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45908098 ctgcagt---tccattgaaatggtgatggtttcaaataagtagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatc 45908002  T
Q  687 ttaagcacatacataagaacttttttatagattattcatctc 728  Q
    |||||||||| || |||||||||||||| |||||||| ||||    
T  45908001 ttaagcacattcacaagaacttttttatggattattcctctc 45907960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 144 - 314
Target Start/End: Original strand, 54103189 - 54103359
Alignment:
Q  144 gcatgtttttgggatagagtttagaataccaaaagcatggctggcgtggttaccaaagcaaatctgccgtgactttattaagctaccatttggagctttt 243  Q
    |||||| ||||| |||||||||| || |||||||||| ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  54103189 gcatgtgtttggtatagagtttacaacaccaaaagcacggctgacgtggttatcaaagcaaaactgccgtgactttattaagctaccatttggagctttt 54103288  T
Q  244 gtgtaaacgtgatacattaccgtagttttctatagaacgtggtttgtcaaaggcaatgacaaacatgctat 314  Q
    | |  ||||||||||||| |||| |||||||||| ||||||||||| |||| |||||| ||||||||||||    
T  54103289 gcgccaacgtgatacattgccgttgttttctataaaacgtggtttgacaaacgcaatggcaaacatgctat 54103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 40283744 - 40283671
Alignment:
Q  173 caaaagcatggctggcgtggttaccaaagcaaatctgccgtgactttattaagctaccatttggagcttttgtg 246  Q
    |||||||| |||| ||||| ||| ||||||||| ||  ||||||||||| |||||| | |||||||||||||||    
T  40283744 caaaagcacggcttgcgtgattatcaaagcaaaactatcgtgactttatgaagctagcctttggagcttttgtg 40283671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 1e-61; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 562 - 729
Target Start/End: Original strand, 22917219 - 22917379
Alignment:
Q  562 atatcaatactattcaacaactcccctacagtagttccattgaaatggtgatggtttcaaataagtagtcataccaatatatagctaaatcacataatta 661  Q
    ||||||||||||||||||||||||| |   ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22917219 atatcaatactattcaacaactcccat---gtagttccattgaaagggtgatggtttcaaataagtagtcataccaatatatagctaaatcacataatta 22917315  T
Q  662 ttatggtcattgattgaaactgatcttaagcacatacataagaacttttttatagattattcatctca 729  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||| |||||||| |||||    
T  22917316 ttatggtcattgattgaaactgatcttaagc----acataagaacttttttatggattattcctctca 22917379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 395 - 548
Target Start/End: Complemental strand, 4785148 - 4784994
Alignment:
Q  395 tttagcttggacgagttgaagaattgg-ccatgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacccacacct 493  Q
    |||||||||||| |||||||||||||| ||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||      
T  4785148 tttagcttggaccagttgaagaattggtccatgatggaccaatttttttaatgtgtagattagacaatccaccaaatcttatcatactctacccacactc 4785049  T
Q  494 tatctaagccatcaccaactctatctccttcattgctctttctctctcttggtac 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4785048 tatctaagccatcaccaactctatctccttcattgctctttctctctcttggtac 4784994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 594 - 729
Target Start/End: Complemental strand, 4784274 - 4784136
Alignment:
Q  594 agttccattgaaatggtgatggtttcaaataagta---gtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatcttaa 690  Q
    ||||||||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4784274 agttccattgaaatggtgatggtttcaaacaagtactagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatcttaa 4784175  T
Q  691 gcacatacataagaacttttttatagattattcatctca 729  Q
    |||||||||  ||||||||||||| |||||||| |||||    
T  4784174 gcacatacacgagaacttttttatggattattcctctca 4784136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 387 - 548
Target Start/End: Original strand, 22917026 - 22917186
Alignment:
Q  387 gggtggcatttagcttggacgagttgaagaattggccatgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttat-------cata 479  Q
    |||||||||||||||||||| ||||||||||||||        ||||||       |||||||||||||||||||||||||||||||||       ||||    
T  22917026 gggtggcatttagcttggaccagttgaagaattgg--------gaccaatttttttaatgtttagattagacaatccaccaaatcttatcagttatcata 22917117  T
Q  480 ctctacccacaccttatctaagccatcaccaactctatctccttcattgctctttctctctcttggtac 548  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22917118 ctctacccacaccctatctaagccatcaccaactctatctccttccttgctctttctctctcttggtac 22917186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 662 - 697
Target Start/End: Complemental strand, 5320185 - 5320150
Alignment:
Q  662 ttatggtcattgattgaaactgatcttaagcacata 697  Q
    |||||||||||||||||||||||||| |||||||||    
T  5320185 ttatggtcattgattgaaactgatctcaagcacata 5320150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 5e-55; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 391 - 548
Target Start/End: Complemental strand, 39773853 - 39773695
Alignment:
Q  391 ggcatttagcttggacgagttgaagaattgg-ccatgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacccac 489  Q
    |||||||||||||||| |||||||||||||| ||||||||| ||||       ||||||||||||||||||||||||||||| |||||||||||||||||    
T  39773853 ggcatttagcttggaccagttgaagaattggtccatgatgggccaatttttttaatgtttagattagacaatccaccaaatcatatcatactctacccac 39773754  T
Q  490 accttatctaagccatcaccaactctatctccttcattgctctttctctctcttggtac 548  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39773753 accctatctaagccatcaccaactctatctccttcattgctctttttctctcttggtac 39773695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 617 - 711
Target Start/End: Complemental strand, 39773650 - 39773556
Alignment:
Q  617 ttcaaataagtagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatcttaagcacatacataagaacttttt 711  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39773650 ttcaaataagtagtcataccaatatatagctaaatcacataattattatggtcattgattgaaactgatcttaagcacatacacaagaacttttt 39773556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 6e-42; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 142 - 313
Target Start/End: Complemental strand, 26353504 - 26353346
Alignment:
Q  142 aagcatgtttttgggatagagtttagaataccaaaagcatggctggcgtggttaccaaagcaaatctgccgtgactttattaagctaccatttggagctt 241  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||                 
T  26353504 aagcatgtgtttggcatagagtttagaataccaaaagcacggctggcgtggttaccaaagcaaatctgtcgtgactttattaagcta------------- 26353418  T
Q  242 ttgtgtaaacgtgatacattaccgtagttttctatagaacgtggtttgtcaaaggcaatgacaaacatgcta 313  Q
     ||| ||||| ||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  26353417 atgtctaaacctgatatattaccgtggttttctatagaacgtggtttgtcaaacgcaatgacaaacatgcta 26353346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 19138395 - 19138444
Alignment:
Q  197 caaagcaaatctgccgtgactttattaagctaccatttggagcttttgtg 246  Q
    ||||||||| ||||||||| |||||||||||| |||||| ||||||||||    
T  19138395 caaagcaaaactgccgtgattttattaagctagcatttgaagcttttgtg 19138444  T

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Target: chr4 (Bit Score: 56; Significance: 8e-23; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 388 - 539
Target Start/End: Original strand, 6127068 - 6127220
Alignment:
Q  388 ggtggcatttagcttggacgagttgaagaattgg-ccatgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacc 486  Q
    |||| |||||||||| ||  | |||||||||||| ||||||||||||||       |||||||||||||||| ||||| |||||||||||||| |||| |    
T  6127068 ggtgtcatttagcttagatcaattgaagaattggtccatgatggaccaatttttttaatgtttagattagactatccatcaaatcttatcatattctatc 6127167  T
Q  487 cacaccttatctaagccatcaccaactctatctccttcattgctctttctctc 539  Q
    |||||   |||| |||||||| |||||||||||| ||||||| ||| ||||||    
T  6127168 cacactaaatcttagccatcatcaactctatctctttcattgttctctctctc 6127220  T

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Target: chr4; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 443 - 537
Target Start/End: Original strand, 44398274 - 44398368
Alignment:
Q  443 aatgtttagattagacaatccaccaaatcttatcatactctacccacaccttatctaagccatcaccaactctatctccttcattgctctttctc 537  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||   |||| |||||| |||||||||||||| ||||||| ||| ||||    
T  44398274 aatgtttagattagactatccatcaaatcttatcatactctatccacactaaatcttagccattaccaactctatctctttcattgttctctctc 44398368  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 393 - 528
Target Start/End: Original strand, 43810833 - 43810969
Alignment:
Q  393 catttagcttggacgagttgaagaattggcc-atgatggaccaannnnnnnaatgtttagattagacaatccaccaaatcttatcatactctacccacac 491  Q
    |||||||||||||| | ||||| ||||||   ||||||||||||       ||| |||||||||||| ||||| |||||||||||  |||||| ||||||    
T  43810833 catttagcttggaccaattgaataattggtttatgatggaccaatttttttaatatttagattagactatccatcaaatcttatcgaactctatccacac 43810932  T
Q  492 cttatctaagccatcaccaactctatctccttcattg 528  Q
       |||| ||||||||||||||||||||| |||||||    
T  43810933 taaatcttagccatcaccaactctatctctttcattg 43810969  T

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Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 36686712 - 36686618
Alignment:
Q  151 tttgggatagagtttagaataccaaaagcatggctggcgtggttaccaaagcaaatctgccgtgactttattaagctaccatttggagcttttgt 245  Q
    ||||| |||||||||| ||| |||||||||||| ||||||| ||| ||||||||| || |  ||||||||| |||||| | ||| ||||||||||    
T  36686712 tttggtatagagtttacaatcccaaaagcatggttggcgtgattatcaaagcaaaactacaatgactttatgaagctaacctttagagcttttgt 36686618  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 23015165 - 23015238
Alignment:
Q  173 caaaagcatggctggcgtggttaccaaagcaaatctgccgtgactttattaagctaccatttggagcttttgtg 246  Q
    |||||| | |||||||||| ||| ||||||||| || |  ||||||||| |||||| | |||||||||||||||    
T  23015165 caaaagtacggctggcgtgattatcaaagcaaaactacaatgactttatgaagctagcctttggagcttttgtg 23015238  T

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