View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3137_low_6 (Length: 250)
Name: NF3137_low_6
Description: NF3137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3137_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 38037366 - 38037143
Alignment:
| Q |
17 |
tcgtatcaaacaaatatacgtagatctaactctacaagtaagatcacctaaacctttttgagaattctaagtcgaagattgttggnnnnnnnggttaata |
116 |
Q |
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| T |
38037366 |
tcgtatcaaacaaatatacgtagatctaactctacaagtaagatcacctaaacctttttgagaattctaagtcgaagattgttggaaaaaaaggttaata |
38037267 |
T |
|
| Q |
117 |
atcaatgaatgatgaaattggagaaatatggaggaagagttgagatttttatttggtttttgtttagatctatgcttgatagttgaatgtgaaattgtaa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38037266 |
atcaatgaatgatgaaattggagaaatatggaggaagagctgagatttttatttggtttttgtttagatctatgcttgatagttgaatgtgaaattgtaa |
38037167 |
T |
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| Q |
217 |
tgaagatttaggttgttacctttg |
240 |
Q |
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|||||||||||||||||||||||| |
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| T |
38037166 |
tgaagatttaggttgttacctttg |
38037143 |
T |
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