View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3138_high_12 (Length: 241)
Name: NF3138_high_12
Description: NF3138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3138_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 12 - 226
Target Start/End: Complemental strand, 27293648 - 27293434
Alignment:
| Q |
12 |
catcatcatctttgatgaaaaacaagtgctatagcttatacctcatatctccaatatccaatggcagataacaaagacattgaaacagtgatcagaagag |
111 |
Q |
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| T |
27293648 |
catcatcatctttgatgaaaaacaagtgctatagcttatacctcatatctccaatatccaatggcagataacaaagacattgaaacagtgatcagaagag |
27293549 |
T |
|
| Q |
112 |
tcacctctgtaaccaaccaccttgtttcctcatcaccacctcaacttatttccttgtgtcacacttcaacttaccaacgtgttcatggtgatgttccttc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27293548 |
tcacctctgtaaccaaccaccttgtttcctcatcaccacctcaacttatttccttgtgtcacacttcaacttaccaacgtgttcatggtgatgttccttc |
27293449 |
T |
|
| Q |
212 |
tgacgacgtagtttg |
226 |
Q |
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| T |
27293448 |
tcacgacgtagtttg |
27293434 |
T |
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