View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3138_low_7 (Length: 417)

Name: NF3138_low_7
Description: NF3138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3138_low_7
NF3138_low_7
[»] chr1 (42 HSPs)
chr1 (18-182)||(11688449-11688613)
chr1 (264-377)||(28455898-28456011)
chr1 (214-379)||(11688285-11688452)
chr1 (64-234)||(11691611-11691785)
chr1 (264-377)||(32007098-32007211)
chr1 (264-377)||(39276374-39276487)
chr1 (264-377)||(41761402-41761515)
chr1 (264-379)||(45813002-45813117)
chr1 (264-377)||(5055779-5055892)
chr1 (264-377)||(41808226-41808339)
chr1 (264-377)||(48660046-48660159)
chr1 (264-379)||(192437-192552)
chr1 (264-377)||(29994374-29994487)
chr1 (273-377)||(20772-20876)
chr1 (264-376)||(35945822-35945934)
chr1 (264-345)||(41039294-41039375)
chr1 (264-379)||(5943703-5943818)
chr1 (264-366)||(50106187-50106289)
chr1 (273-380)||(7059488-7059595)
chr1 (264-377)||(46447364-46447481)
chr1 (265-379)||(26032820-26032937)
chr1 (271-379)||(4065983-4066091)
chr1 (264-368)||(13109803-13109907)
chr1 (276-377)||(7275705-7275806)
chr1 (273-346)||(35110099-35110172)
chr1 (309-377)||(29587276-29587344)
chr1 (273-377)||(49783731-49783835)
chr1 (264-339)||(3716424-3716499)
chr1 (274-376)||(21938967-21939069)
chr1 (273-366)||(13097339-13097432)
chr1 (274-338)||(26264537-26264601)
chr1 (273-340)||(778635-778702)
chr1 (264-379)||(38817190-38817305)
chr1 (270-369)||(39284322-39284421)
chr1 (276-319)||(13183179-13183222)
chr1 (276-342)||(2088908-2088974)
chr1 (270-328)||(9886889-9886947)
chr1 (263-317)||(25931147-25931201)
chr1 (274-376)||(32982351-32982453)
chr1 (311-377)||(35224364-35224430)
chr1 (294-327)||(16770177-16770210)
chr1 (330-379)||(47111479-47111528)
[»] chr8 (40 HSPs)
chr8 (264-377)||(32333138-32333251)
chr8 (264-377)||(28817280-28817393)
chr8 (264-377)||(35779488-35779601)
chr8 (264-377)||(1331-1444)
chr8 (265-377)||(6602510-6602622)
chr8 (265-377)||(6677963-6678075)
chr8 (264-377)||(42885198-42885311)
chr8 (264-376)||(1078639-1078751)
chr8 (264-377)||(7792685-7792798)
chr8 (264-377)||(7813346-7813459)
chr8 (264-377)||(42192630-42192743)
chr8 (264-377)||(70514-70627)
chr8 (264-377)||(4530973-4531086)
chr8 (264-377)||(10963233-10963344)
chr8 (276-370)||(31532128-31532222)
chr8 (273-377)||(39303333-39303438)
chr8 (265-377)||(40911245-40911356)
chr8 (270-377)||(5385362-5385469)
chr8 (274-377)||(9292042-9292145)
chr8 (264-377)||(3822420-3822533)
chr8 (264-377)||(12534711-12534822)
chr8 (273-377)||(31969720-31969824)
chr8 (273-377)||(45264640-45264743)
chr8 (264-377)||(6099596-6099709)
chr8 (264-377)||(39435306-39435419)
chr8 (264-342)||(13891149-13891227)
chr8 (264-377)||(41849223-41849335)
chr8 (301-379)||(18386730-18386808)
chr8 (274-379)||(18752363-18752468)
chr8 (273-377)||(29425381-29425479)
chr8 (264-324)||(20269607-20269667)
chr8 (264-324)||(21056236-21056296)
chr8 (264-360)||(33731455-33731551)
chr8 (274-377)||(7403696-7403798)
chr8 (264-338)||(31695260-31695334)
chr8 (264-341)||(9775033-9775110)
chr8 (276-379)||(40932731-40932834)
chr8 (321-379)||(22203722-22203780)
chr8 (264-377)||(42364694-42364805)
chr8 (264-335)||(14400781-14400852)
[»] chr4 (54 HSPs)
chr4 (264-379)||(45874077-45874192)
chr4 (264-377)||(34739304-34739417)
chr4 (264-377)||(23417474-23417587)
chr4 (264-377)||(28798379-28798492)
chr4 (264-377)||(43139897-43140010)
chr4 (264-379)||(12735453-12735568)
chr4 (264-377)||(1173975-1174088)
chr4 (264-377)||(19849494-19849607)
chr4 (264-377)||(26424849-26424961)
chr4 (264-377)||(53457848-53457961)
chr4 (264-377)||(54768423-54768536)
chr4 (274-377)||(55214676-55214779)
chr4 (264-377)||(12867865-12867978)
chr4 (264-377)||(18257353-18257466)
chr4 (264-374)||(29581035-29581144)
chr4 (272-377)||(238457-238562)
chr4 (264-379)||(22608007-22608122)
chr4 (273-376)||(55400253-55400356)
chr4 (282-376)||(39807869-39807963)
chr4 (264-377)||(19225283-19225396)
chr4 (264-369)||(19673920-19674025)
chr4 (264-377)||(11278006-11278115)
chr4 (277-376)||(23710337-23710436)
chr4 (263-377)||(2864738-2864852)
chr4 (264-377)||(50033405-50033519)
chr4 (264-377)||(19814129-19814242)
chr4 (264-369)||(24417869-24417974)
chr4 (262-379)||(24517972-24518089)
chr4 (260-341)||(33770628-33770708)
chr4 (288-377)||(49030754-49030842)
chr4 (264-340)||(1966611-1966687)
chr4 (286-379)||(32778147-32778238)
chr4 (283-377)||(37134072-37134166)
chr4 (264-379)||(51287623-51287739)
chr4 (274-368)||(516457-516551)
chr4 (274-379)||(2804544-2804647)
chr4 (274-376)||(12767112-12767214)
chr4 (285-379)||(22910269-22910363)
chr4 (285-379)||(22968159-22968253)
chr4 (264-326)||(31015057-31015119)
chr4 (264-326)||(52171981-52172043)
chr4 (264-341)||(37620677-37620753)
chr4 (264-377)||(52768292-52768404)
chr4 (264-316)||(50347320-50347372)
chr4 (311-370)||(3465783-3465842)
chr4 (264-341)||(2075565-2075642)
chr4 (308-377)||(32441119-32441188)
chr4 (276-319)||(23532129-23532172)
chr4 (264-326)||(16555382-16555444)
chr4 (274-324)||(48822890-48822940)
chr4 (274-335)||(1125953-1126014)
chr4 (350-379)||(16342826-16342855)
chr4 (303-379)||(16887581-16887657)
chr4 (272-316)||(19119214-19119258)
[»] scaffold0032 (1 HSPs)
scaffold0032 (264-377)||(56505-56618)
[»] chr2 (44 HSPs)
chr2 (264-377)||(26605648-26605761)
chr2 (264-379)||(34460391-34460506)
chr2 (264-377)||(10639597-10639710)
chr2 (264-377)||(37197601-37197714)
chr2 (262-377)||(19537331-19537446)
chr2 (264-377)||(33083545-33083658)
chr2 (264-377)||(11708702-11708815)
chr2 (264-377)||(23839883-23839996)
chr2 (264-377)||(11459739-11459852)
chr2 (264-377)||(45125156-45125269)
chr2 (262-377)||(29659207-29659322)
chr2 (263-377)||(19816244-19816358)
chr2 (260-377)||(11816538-11816655)
chr2 (264-377)||(19048778-19048891)
chr2 (264-377)||(39535525-39535638)
chr2 (273-379)||(38440197-38440303)
chr2 (270-373)||(4851348-4851451)
chr2 (273-379)||(43778468-43778574)
chr2 (264-377)||(39831435-39831547)
chr2 (264-376)||(7275877-7275989)
chr2 (275-379)||(15782612-15782715)
chr2 (264-379)||(27137909-27138023)
chr2 (276-376)||(16654388-16654488)
chr2 (270-377)||(34234554-34234659)
chr2 (276-379)||(40786212-40786315)
chr2 (276-379)||(43684091-43684194)
chr2 (273-326)||(42578243-42578296)
chr2 (276-377)||(7349122-7349223)
chr2 (273-379)||(44181887-44181993)
chr2 (276-377)||(4800900-4801001)
chr2 (264-379)||(42025692-42025808)
chr2 (276-346)||(40825161-40825231)
chr2 (273-377)||(21312229-21312331)
chr2 (264-341)||(33001762-33001839)
chr2 (274-324)||(15344966-15345016)
chr2 (259-379)||(6054991-6055111)
chr2 (264-376)||(33564900-33565010)
chr2 (303-376)||(38400494-38400567)
chr2 (289-379)||(15072115-15072204)
chr2 (275-340)||(20497592-20497657)
chr2 (264-377)||(34239811-34239924)
chr2 (329-377)||(25501839-25501887)
chr2 (276-379)||(34093259-34093363)
chr2 (264-319)||(41780417-41780473)
[»] chr7 (51 HSPs)
chr7 (264-376)||(2146661-2146773)
chr7 (259-377)||(23358209-23358327)
chr7 (264-377)||(4106762-4106875)
chr7 (264-377)||(40058262-40058375)
chr7 (264-377)||(44083964-44084077)
chr7 (264-377)||(4107333-4107446)
chr7 (264-377)||(31770523-31770636)
chr7 (259-372)||(47570704-47570817)
chr7 (264-377)||(47250242-47250355)
chr7 (264-376)||(25546266-25546378)
chr7 (264-377)||(8439102-8439215)
chr7 (264-377)||(25112238-25112351)
chr7 (264-369)||(38781199-38781304)
chr7 (264-377)||(7162781-7162892)
chr7 (271-377)||(41183839-41183945)
chr7 (264-376)||(48146778-48146890)
chr7 (272-377)||(5772818-5772923)
chr7 (273-378)||(11355846-11355951)
chr7 (280-379)||(27229484-27229584)
chr7 (274-377)||(43753754-43753858)
chr7 (264-377)||(28603035-28603148)
chr7 (272-377)||(38033753-38033858)
chr7 (265-377)||(43203330-43203442)
chr7 (264-379)||(5587302-5587417)
chr7 (264-379)||(5592263-5592378)
chr7 (264-379)||(32606321-32606436)
chr7 (264-370)||(39513974-39514080)
chr7 (264-376)||(47557806-47557918)
chr7 (262-377)||(15634868-15634983)
chr7 (264-377)||(29484746-29484859)
chr7 (273-379)||(43170939-43171045)
chr7 (270-319)||(19630665-19630714)
chr7 (261-376)||(27915568-27915684)
chr7 (264-376)||(4001835-4001945)
chr7 (264-376)||(48444143-48444255)
chr7 (262-368)||(5462939-5463045)
chr7 (273-377)||(42081619-42081720)
chr7 (288-377)||(13887195-13887282)
chr7 (283-333)||(34763510-34763560)
chr7 (264-346)||(35577867-35577949)
chr7 (273-339)||(40657591-40657657)
chr7 (264-341)||(10220464-10220540)
chr7 (272-377)||(25872787-25872892)
chr7 (273-369)||(35309886-35309982)
chr7 (273-324)||(31288224-31288275)
chr7 (278-339)||(18506281-18506341)
chr7 (269-379)||(40642996-40643099)
chr7 (297-377)||(47960979-47961059)
chr7 (277-339)||(10626451-10626513)
chr7 (276-312)||(23036208-23036244)
chr7 (280-376)||(25049965-25050061)
[»] scaffold1348 (1 HSPs)
scaffold1348 (264-377)||(853-966)
[»] scaffold0119 (2 HSPs)
scaffold0119 (264-377)||(13942-14055)
scaffold0119 (264-377)||(19622-19735)
[»] chr5 (31 HSPs)
chr5 (264-377)||(13203981-13204094)
chr5 (264-377)||(21018247-21018360)
chr5 (264-377)||(4824930-4825043)
chr5 (264-377)||(35317688-35317801)
chr5 (264-374)||(31909376-31909486)
chr5 (264-377)||(12257380-12257493)
chr5 (273-376)||(2971009-2971112)
chr5 (270-376)||(29265900-29266006)
chr5 (276-377)||(6021016-6021117)
chr5 (276-379)||(40177646-40177749)
chr5 (276-377)||(1191543-1191644)
chr5 (270-379)||(21112071-21112180)
chr5 (264-333)||(32143405-32143474)
chr5 (282-376)||(27721456-27721550)
chr5 (264-377)||(8734020-8734134)
chr5 (273-379)||(14270546-14270652)
chr5 (273-376)||(23262573-23262672)
chr5 (264-369)||(28591341-28591446)
chr5 (274-377)||(3386894-3387004)
chr5 (262-342)||(17984731-17984811)
chr5 (273-379)||(35545955-35546061)
chr5 (273-377)||(2786295-2786398)
chr5 (264-377)||(11124676-11124789)
chr5 (279-376)||(2755950-2756047)
chr5 (297-377)||(9576985-9577065)
chr5 (264-308)||(17465170-17465214)
chr5 (276-340)||(41580078-41580142)
chr5 (264-319)||(19181793-19181847)
chr5 (264-314)||(4925673-4925723)
chr5 (313-378)||(3049094-3049159)
chr5 (335-376)||(30127919-30127960)
[»] chr3 (36 HSPs)
chr3 (264-377)||(7824445-7824558)
chr3 (264-377)||(43247641-43247754)
chr3 (262-377)||(29689471-29689586)
chr3 (264-377)||(54151672-54151785)
chr3 (264-379)||(28844526-28844642)
chr3 (264-377)||(3112986-3113099)
chr3 (264-377)||(9349667-9349780)
chr3 (264-377)||(36228985-36229098)
chr3 (264-377)||(51665916-51666029)
chr3 (272-377)||(54158290-54158395)
chr3 (264-377)||(4601449-4601562)
chr3 (279-377)||(55018040-55018138)
chr3 (264-377)||(52500862-52500975)
chr3 (275-379)||(1778873-1778977)
chr3 (264-377)||(42392796-42392909)
chr3 (274-377)||(35461480-35461583)
chr3 (264-377)||(33334632-33334745)
chr3 (272-377)||(29750645-29750749)
chr3 (274-370)||(38257304-38257400)
chr3 (264-343)||(7958627-7958706)
chr3 (264-327)||(55320391-55320454)
chr3 (264-377)||(41377608-41377716)
chr3 (264-376)||(475272-475383)
chr3 (264-376)||(32001415-32001527)
chr3 (273-377)||(43775247-43775351)
chr3 (274-376)||(40756728-40756831)
chr3 (273-367)||(47635005-47635099)
chr3 (278-376)||(8151373-8151471)
chr3 (273-379)||(50729546-50729652)
chr3 (273-379)||(50783197-50783303)
chr3 (273-379)||(51054723-51054829)
chr3 (282-379)||(448884-448981)
chr3 (264-310)||(2590801-2590847)
chr3 (276-377)||(53182757-53182858)
chr3 (273-376)||(27230692-27230794)
chr3 (273-378)||(8137633-8137736)
[»] scaffold0044 (1 HSPs)
scaffold0044 (265-377)||(9965-10077)
[»] chr6 (23 HSPs)
chr6 (264-377)||(33704240-33704353)
chr6 (264-377)||(33621518-33621631)
chr6 (264-377)||(21037315-21037427)
chr6 (264-379)||(4464149-4464264)
chr6 (264-377)||(28322956-28323069)
chr6 (264-377)||(2959173-2959286)
chr6 (264-376)||(16518448-16518558)
chr6 (264-377)||(19145495-19145607)
chr6 (264-377)||(21000716-21000829)
chr6 (264-381)||(29009641-29009758)
chr6 (264-333)||(35218631-35218700)
chr6 (273-379)||(24619079-24619185)
chr6 (264-377)||(361035-361148)
chr6 (273-377)||(32289370-32289473)
chr6 (299-378)||(11572031-11572110)
chr6 (274-379)||(12252045-12252150)
chr6 (264-333)||(28592119-28592188)
chr6 (265-377)||(584776-584887)
chr6 (264-379)||(32353932-32354046)
chr6 (281-379)||(10999416-10999514)
chr6 (276-343)||(7014313-7014380)
chr6 (273-327)||(11456047-11456101)
chr6 (264-338)||(22576244-22576318)
[»] scaffold0053 (1 HSPs)
scaffold0053 (273-379)||(22185-22291)
[»] scaffold0038 (1 HSPs)
scaffold0038 (264-377)||(114276-114389)
[»] scaffold0067 (1 HSPs)
scaffold0067 (264-377)||(34842-34956)
[»] scaffold0352 (1 HSPs)
scaffold0352 (264-376)||(8934-9046)
[»] scaffold0360 (1 HSPs)
scaffold0360 (274-379)||(14517-14632)
[»] scaffold0631 (1 HSPs)
scaffold0631 (264-306)||(4413-4455)
[»] scaffold0079 (1 HSPs)
scaffold0079 (350-379)||(50006-50035)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 11688613 - 11688449
Alignment:
Q  18 tcatgctcctcaacacaacgacattataccttcattaacattttattttcttaaatctttgtttctcaaggtaagtgctgatcattttctcttgtttata 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  11688613 tcatgctcctcaacacaacgacattataccttcattaacattttattttcttaaatctttgtttatcaaggtaagtgctgatcattttctcttgcttata 11688514  T
Q  118 acatataccctcattaatattttattttctttttatattccaatgaagcttttcatttacggttg 182  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  11688513 acatataccctcattaatattttattttctttttatattctaatgaagcttttcatgtacggttg 11688449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 28456011 - 28455898
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  28456011 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 28455912  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  28455911 aatttcggcatttg 28455898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 214 - 379
Target Start/End: Complemental strand, 11688452 - 11688285
Alignment:
Q  214 gttgtataatagaatgaaaaatctcttagtcttttttcttctttcttatatttttgtt--ggtcttagatgaagtggtaatccactgaaaataaactcac 311  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||    
T  11688452 gttgtataatagaatgaaaaatcctttagtcttttttcttctttcttatattttttttttggtcttggatgaagtggtaatccactgaaaataaactcac 11688353  T
Q  312 acacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    |||||||||||| |||  |  |||||||| ||||| |||||| ||| ||||||||||||  |||||||    
T  11688352 acacaactctgaagtcctgaattcgaaccagggtcacaacgttcgggcttgcaatttcgatatttgtc 11688285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 64 - 234
Target Start/End: Complemental strand, 11691785 - 11691611
Alignment:
Q  64 tttcttaaatctttgtttc-tcaaggtaagtgctgatcattttctcttgtttataac---atataccctcattaatattttattttctttttatattcca 159  Q
    ||||||||||||||||||  | ||||| ||||||||| ||||||||||| |||| ||   ||||| | |||||||||||||||||||||||||||||| |    
T  11691785 tttcttaaatctttgttttattaaggtcagtgctgattattttctcttgcttattactatatataacttcattaatattttattttctttttatattcta 11691686  T
Q  160 atgaagcttttcatttacggttggttgttaatgtttgatgattcaaggtcttgtgttgtataatagaatgaaaaa 234  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  11691685 atgaagcttttcatgtacggttcgttgttaatgtttgatgattcatggtgttgtgttgtataatagaataaaaaa 11691611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 32007211 - 32007098
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  32007211 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 32007112  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  32007111 aatttcggcatttg 32007098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 39276487 - 39276374
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  39276487 ttttttttggtcttaaatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 39276388  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  39276387 aatttcggcatttg 39276374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 41761402 - 41761515
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||||    
T  41761402 ttttttttggtcttggatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgc 41761501  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  41761502 aatttcggcatttg 41761515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 45813002 - 45813117
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | | ||||| ||||||    
T  45813002 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgc 45813101  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||||||||||||    
T  45813102 aatttcggcatttgtc 45813117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 5055779 - 5055892
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  5055779 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 5055878  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  5055879 aatttcggcatttg 5055892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 41808339 - 41808226
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||||    
T  41808339 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgc 41808240  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  41808239 aatttcggcatttg 41808226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 48660159 - 48660046
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||  |||||||||||||||    
T  48660159 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgc 48660060  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  48660059 aatttcggcatttg 48660046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 192552 - 192437
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||| ||| || ||||||||||||||||    
T  192552 ttttttttggtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtcctgggttcgaacacggatcacaacgtccggccttgc 192453  T
Q  364 aatttcggcatttgtc 379  Q
    |||||  |||||||||    
T  192452 aattttagcatttgtc 192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 29994374 - 29994487
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||   ||||| ||||||||    
T  29994374 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgc 29994473  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  29994474 aatttcggcatttg 29994487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 20876 - 20772
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| ||||||| |  ||||| ||||||||||||||||    
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcggc 20777  T
Q  373 atttg 377  Q
    |||||    
T  20776 atttg 20772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 35945934 - 35945822
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||  ||||||||||||| |||| |||||||| ||||| |    
T  35945934 ttttttttgatcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacccaggtcacaacgtccagccttac 35945835  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  35945834 aatttcggcattt 35945822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 41039294 - 41039375
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggt 345  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  41039294 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggt 41039375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 5943818 - 5943703
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||| ||||||| ||||| |||||||||| |||||| |||||||  | ||||||||||||||| | ||||||||||||||    
T  5943818 tttttttttgtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgc 5943719  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||||||||||||    
T  5943718 aatttcggcatttgtc 5943703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 366
Target Start/End: Original strand, 50106187 - 50106289
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||| |||||||| ||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| |||||| |||||||||    
T  50106187 tttttatttgtcatagatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgttcggccttgc 50106286  T
Q  364 aat 366  Q
    |||    
T  50106287 aat 50106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 273 - 380
Target Start/End: Complemental strand, 7059595 - 7059488
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||| | |||||||||||||| | ||||| | ||||||||||| | |    
T  7059595 gtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaattttgac 7059496  T
Q  373 atttgtcc 380  Q
    ||||||||    
T  7059495 atttgtcc 7059488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 46447364 - 46447481
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataa----actcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcc 359  Q
    ||||| || ||||||||||| |||||||||||||||||||||    ||||||||| |||| ||||||| |||||||||||||||||  | |||||  |||    
T  46447364 tttttttttgtcttagatgatgtggtaatccactgaaaataattaaactcacacataactgtgaggtcccgggttcgaacccgggttacgacgtcgagcc 46447463  T
Q  360 ttgcaatttcggcatttg 377  Q
    ||||||||||||||||||    
T  46447464 ttgcaatttcggcatttg 46447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 379
Target Start/End: Complemental strand, 26032937 - 26032820
Alignment:
Q  265 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgt---ccggcctt 361  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||  | |||||||||||||||| | ||||   ||| ||||    
T  26032937 tttttttggtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccgccgacctt 26032838  T
Q  362 gcaatttcggcatttgtc 379  Q
     |||||||||||||||||    
T  26032837 acaatttcggcatttgtc 26032820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 4066091 - 4065983
Alignment:
Q  271 tggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 370  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||| | | ||||||| | ||||||||||| || |||||| | | ||||||||||||    
T  4066091 tggtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacccggatcacaacgttcagtcttgcaatttcg 4065992  T
Q  371 gcatttgtc 379  Q
    | |||||||    
T  4065991 gtatttgtc 4065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 13109907 - 13109803
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    ||||||||  |||||  | ||||||| ||||||    
T  13109907 tttttttttgtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgc 13109808  T
Q  364 aattt 368  Q
    |||||    
T  13109807 aattt 13109803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 7275806 - 7275705
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||||||||||||| ||||||||| |||||||| |||||||| ||| ||  |||||||||| ||| |||  |||||||| |||| |||||||| ||||    
T  7275806 ttagatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcataacgtccgaccttacaatttcgacatt 7275707  T
Q  376 tg 377  Q
    ||    
T  7275706 tg 7275705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 346
Target Start/End: Original strand, 35110099 - 35110172
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 346  Q
    |||||||||||||||||||||| || ||| ||||||||||||||||| | |||||  |||||||||||||||||    
T  35110099 gtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacccgggtc 35110172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 377
Target Start/End: Complemental strand, 29587344 - 29587276
Alignment:
Q  309 cacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    ||||||||| | ||||||| ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  29587344 cacacacaattgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcatttg 29587276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 49783835 - 49783731
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||| ||||||||| |||| ||||| |||||| ||||||  ||||||||||||||  ||   |||| || ||||||||||||| |    
T  49783835 gtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttcgac 49783736  T
Q  373 atttg 377  Q
    |||||    
T  49783735 atttg 49783731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 339
Target Start/End: Complemental strand, 3716499 - 3716424
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 339  Q
    ||||| || |||| ||||||||||  |||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  3716499 tttttttttgtctaagatgaagtgacaatccactaaaaataaactcacacacaactgtgaggtctcaggttcgaac 3716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 376
Target Start/End: Complemental strand, 21939069 - 21938967
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    |||||||||||||||||| || |||||| ||||||| ||||||||| |||||||  || |||||| |||| ||   || ||||||||| |||||||||||    
T  21939069 tcttagatgaagtggtaaaccgctgaaattaaactcgcacacaactgtgaggtcctggattcgaatccggatcatgacatccggccttacaatttcggca 21938970  T
Q  374 ttt 376  Q
    |||    
T  21938969 ttt 21938967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 366
Target Start/End: Complemental strand, 13097432 - 13097339
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaat 366  Q
    ||||||||||||||||||||||| | ||| |||||||||| |||||| ||||||    |||| ||| ||||||| | ||||||| |||||||||    
T  13097432 gtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggttctaggtttgaatccgggtcacgacgtccgaccttgcaat 13097339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 338
Target Start/End: Original strand, 26264537 - 26264601
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaa 338  Q
    |||||||||||||| |||| || ||||| ||||||||||||||||| |||||| || ||||||||    
T  26264537 tcttagatgaagtgataatacattgaaattaaactcacacacaactgtgaggtttcaggttcgaa 26264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 778702 - 778635
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 340  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||| | |||||   ||||||||||    
T  778702 gtcttagatgaattggtaattcactgaaattaaactcacacacaactgtcaggtcctaggttcgaacc 778635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 38817190 - 38817305
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||| || |||||| | | | ||| |||| |||||||||| | ||||||||||||||||||| ||| || | |||||||| ||| |    
T  38817190 tttttttttgtcttagataaaatggtaaacaattaaaattaaattcacacacaattgtgaggtctcgggttcgaactcggatcacgacgtccggtctttc 38817289  T
Q  364 aatttcggcatttgtc 379  Q
    ||| ||| ||||||||    
T  38817290 aatatcgacatttgtc 38817305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 369
Target Start/End: Complemental strand, 39284421 - 39284322
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 369  Q
    ||||| ||||||||| | |||||||||  ||| |||||||||| |||||| ||||||||  ||||||||||||  || | ||||||| |||| |||||||    
T  39284421 ttggttttagatgaaatagtaatccacaaaaattaaactcacatacaactgtgaggtcttaggttcgaacccgaatcacgacgtccgaccttacaatttc 39284322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 319
Target Start/End: Original strand, 13183179 - 13183222
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaact 319  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||    
T  13183179 ttagatgaagtggtaattcactgaaattaaactcacatacaact 13183222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 2088908 - 2088974
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 342  Q
    |||||||||||||||||||||||||| | |||||||| |||| | ||||||   | |||||||||||    
T  2088908 ttagatgaagtggtaatccactgaaattgaactcacatacaattgtgaggttctgagttcgaacccg 2088974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 328
Target Start/End: Original strand, 9886889 - 9886947
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtct 328  Q
    ||||||||||||||||||||||| || ||| | |||||||||||| |||| | ||||||    
T  9886889 ttggtcttagatgaagtggtaattcagtgatattaaactcacacataactgttaggtct 9886947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Original strand, 25931147 - 25931201
Alignment:
Q  263 atttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaa 317  Q
    |||||| || |||| |||||||||||||||| | ||||| |||||||||||||||    
T  25931147 atttttttttgtctcagatgaagtggtaatctattgaaattaaactcacacacaa 25931201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 376
Target Start/End: Original strand, 32982351 - 32982453
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    ||||||||||||| |||| |||||||||  |||||||||||||||| |||  |||| |||| |||  ||||||  || ||  |||||| || ||||||||    
T  32982351 tcttagatgaagtagtaaaccactgaaatcaaactcacacacaactgtgatttctcaggtttgaattcgggtcataaagtttggccttacagtttcggca 32982450  T
Q  374 ttt 376  Q
    |||    
T  32982451 ttt 32982453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 35224430 - 35224364
Alignment:
Q  311 cacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    ||||||||| |||||||  |||||||||||||||||   ||||||||||||||| |||  |||||||    
T  35224430 cacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcatttttcgcatttg 35224364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 327
Target Start/End: Original strand, 16770177 - 16770210
Alignment:
Q  294 cactgaaaataaactcacacacaactctgaggtc 327  Q
    |||||||||||||||||||||||||| |||||||    
T  16770177 cactgaaaataaactcacacacaactgtgaggtc 16770210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 379
Target Start/End: Complemental strand, 47111528 - 47111479
Alignment:
Q  330 gggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    |||||| ||||| |||| | ||||||| ||||||||||||||||||||||    
T  47111528 gggttcaaacccaggtcacgacgtccgaccttgcaatttcggcatttgtc 47111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 4e-48; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 32333251 - 32333138
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  32333251 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 32333152  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  32333151 aatttcggcatttg 32333138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 28817393 - 28817280
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||| ||||||||||||||||    
T  28817393 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgc 28817294  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  28817293 aatttcggcatttg 28817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 35779488 - 35779601
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  35779488 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 35779587  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  35779588 aattttggcatttg 35779601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 1331 - 1444
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||||||    
T  1331 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgc 1430  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  1431 aattttggcatttg 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 6602510 - 6602622
Alignment:
Q  265 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 364  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||    
T  6602510 tttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgca 6602609  T
Q  365 atttcggcatttg 377  Q
    |||||||||||||    
T  6602610 atttcggcatttg 6602622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 6677963 - 6678075
Alignment:
Q  265 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 364  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   |||||||||||||||    
T  6677963 tttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgca 6678062  T
Q  365 atttcggcatttg 377  Q
    |||||||||||||    
T  6678063 atttcggcatttg 6678075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 42885311 - 42885198
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   ||||||||||||||    
T  42885311 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgc 42885212  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  42885211 aatttcggcatttg 42885198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 1078639 - 1078751
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||   ||||||||||||||    
T  1078639 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgc 1078738  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  1078739 aatttcggcattt 1078751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 7792798 - 7792685
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || |||||||||||||| ||| |||||||| |||||||    
T  7792798 ttttttttggtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgc 7792699  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  7792698 aatttcggcatttg 7792685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 7813459 - 7813346
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||| |||||||||||    
T  7813459 ttttttttggttttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcacaacatccggccttgc 7813360  T
Q  364 aatttcggcatttg 377  Q
    |||||| |||||||    
T  7813359 aatttcagcatttg 7813346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 42192630 - 42192743
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||   ||||||||||||||    
T  42192630 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgc 42192729  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  42192730 aatttcggcatttg 42192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 70514 - 70627
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||   ||||||| ||||||    
T  70514 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgc 70613  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  70614 aatttcggcatttg 70627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 4530973 - 4531086
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||| ||||||||||||||||||   |||||| |||||||    
T  4530973 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgc 4531072  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  4531073 aatttcggcatttg 4531086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 10963233 - 10963344
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||| || || |||||| ||||||||     
T  10963233 ttttttttggtcttagatgaagtggtaatccactgaaaataaact--cacacaactgtgaggtcccgggttcgaacctggatcacaacgttcggccttgt 10963330  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  10963331 aatttcggcatttg 10963344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 276 - 370
Target Start/End: Original strand, 31532128 - 31532222
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 370  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||| | ||||| || ||||||| |||||||||||||||||||||||    
T  31532128 ttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtccccggttcaaatccgggtcacaacgtccggccttgcaatttcg 31532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 39303438 - 39303333
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 371  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||  |||   ||||||||||||||||||||||    
T  39303438 gtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttcgg 39303339  T
Q  372 catttg 377  Q
    ||||||    
T  39303338 catttg 39303333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 265 - 377
Target Start/End: Complemental strand, 40911356 - 40911245
Alignment:
Q  265 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 364  Q
    |||| ||| |||||||||||||||||| ||||||||| ||||||||||||||  | ||||||| ||| |||||||||||||| | |||||||||||||||    
T  40911356 tttttttgatcttagatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtcccgg-ttcgaacccgggtcacgacgtccggccttgca 40911258  T
Q  365 atttcggcatttg 377  Q
    |||||||||||||    
T  40911257 atttcggcatttg 40911245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 270 - 377
Target Start/End: Complemental strand, 5385469 - 5385362
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 369  Q
    |||||| || ||||||||||||  |||||||| ||||||||||||||||| ||||||| |||||||||||| ||||| | |||||| |||||||||||||    
T  5385469 ttggtcataaatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtccagccttgcaatttc 5385370  T
Q  370 ggcatttg 377  Q
    ||||||||    
T  5385369 ggcatttg 5385362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 9292145 - 9292042
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |||||||  |||||| ||||||||||| || |||||||| ||    
T  9292145 tcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaagtcccgagttcgaattcgggtcacaacgtccggctttacaatttcgaca 9292046  T
Q  374 tttg 377  Q
    ||||    
T  9292045 tttg 9292042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 3822533 - 3822420
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||| ||||||||||| |||| ||| ||||||||||||||||| |||| ||  ||||||||||||||||| ||||||||| |||| |    
T  3822533 tttttttttgtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgaccttac 3822434  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  3822433 aatttcggcatttg 3822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 12534711 - 12534822
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||  ||| ||||| |||| ||  |||||||||||||| || | ||||||||||||||    
T  12534711 tttttttttgtcttagatgaagtggtaatctactgaaaataaact--cacgcaactgtgagatcctgggttcgaacccggatcacgacgtccggccttgc 12534808  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  12534809 aatttcggcatttg 12534822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 273 - 377
Target Start/End: Original strand, 31969720 - 31969824
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||| ||||||||| |||| |||||||||||| ||||||| || |||||||||||| ||   ||||| ||||||| |||||||||    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacccggatcatgacgtctggccttgaaatttcggc 31969819  T
Q  373 atttg 377  Q
    |||||    
T  31969820 atttg 31969824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 273 - 377
Target Start/End: Original strand, 45264640 - 45264743
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||| ||||||| |||||||||||||| ||| | |||| || || ||||||||||||    
T  45264640 gtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtcacgacgttcgacc-tgcaatttcggc 45264738  T
Q  373 atttg 377  Q
    |||||    
T  45264739 atttg 45264743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 6099709 - 6099596
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||||| ||| ||||||||| | ||| | |||||| |||||||||||| ||||||   ||||||||||||||    
T  6099709 tttttttttgtcttagatgaagtggtaaaccactaaaactaaactcacgcgcaattgtgaggtttcgggttcgaactcgggtcatgacgtccggccttgc 6099610  T
Q  364 aatttcggcatttg 377  Q
    ||||||| ||||||    
T  6099609 aatttcgacatttg 6099596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 39435419 - 39435306
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||||| |||||||||  ||| ||||||||||||||||| ||||||||||||||||||||| | ||   ||||||| ||||||    
T  39435419 tttttttttgtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacccagatcatgacgtccgaccttgc 39435320  T
Q  364 aatttcggcatttg 377  Q
    ||||| | ||||||    
T  39435319 aattttgacatttg 39435306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 342
Target Start/End: Complemental strand, 13891227 - 13891149
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 342  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||   ||||||||||||    
T  13891227 tttttttttgtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaacccg 13891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 41849223 - 41849335
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||| ||||||||||| |||||||| ||||||| ||||||||||||||||  ||||||  ||| ||||||||| | || | ||||||| ||||||    
T  41849223 ttttttttgatcttagatgaaatggtaatc-actgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgc 41849321  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  41849322 aatttcggcatttg 41849335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 379
Target Start/End: Complemental strand, 18386808 - 18386730
Alignment:
Q  301 aataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||   || |||| |||||||||||| |||||||||    
T  18386808 aataaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttcagcatttgtc 18386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 18752468 - 18752363
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    ||||| ||||||||  |||||||||||| ||||| ||||||||||| | ||||  ||||||||||||| | || | ||||||| |||| ||||||||| |    
T  18752468 tcttanatgaagtgtcaatccactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgaccttacaatttcggta 18752369  T
Q  374 tttgtc 379  Q
    ||||||    
T  18752368 tttgtc 18752363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 29425479 - 29425381
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |  ||| || ||||      ||||||||   ||||||||||||||||||| |||    
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaattgcgagatcccggg------cccgggtcatgacgtccggccttgcaattttggc 29425386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 20269667 - 20269607
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 324  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  20269667 ttttttttgttcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 20269607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 21056296 - 21056236
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 324  Q
    ||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  21056296 ttttttttgttcttagatgaaatggtaatccattgaaaataaactcacacacaactgtgag 21056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 360
Target Start/End: Original strand, 33731455 - 33731551
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcct 360  Q
    ||||| || |||||||| |||||||||| ||||| ||| |||||||||||||||||  |||||| || ||| ||||||||||| | ||||| |||||    
T  33731455 tttttttttgtcttagaagaagtggtaaaccactaaaattaaactcacacacaactgggaggtcccgagtttgaacccgggtcacgacgtctggcct 33731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 377
Target Start/End: Original strand, 7403696 - 7403798
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    ||||||||||||||||||| |||||||| ||| |||||| |||||| ||| ||||||| ||||||| || ||| | ||||||| |||| |||||| | ||    
T  7403696 tcttagatgaagtggtaat-cactgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgaccttacaattttgaca 7403794  T
Q  374 tttg 377  Q
    ||||    
T  7403795 tttg 7403798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 338
Target Start/End: Original strand, 31695260 - 31695334
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaa 338  Q
    ||||| || ||||||||||||||||||| ||| ||||| ||||||||||||||| | ||||||| | ||||||||    
T  31695260 tttttttttgtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtcccaggttcgaa 31695334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 9775033 - 9775110
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 341  Q
    ||||| || |||||||||||||| |||||||| | ||| |||||||||||| |||| ||||||  |||||||||||||    
T  9775033 tttttttttgtcttagatgaagttgtaatccattcaaattaaactcacacataactgtgaggttccgggttcgaaccc 9775110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 40932834 - 40932731
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||| |||| | |||| |||||| |||| || | ||||||   ||| |||||||| ||||    
T  40932834 ttagatgaagtggtaatctactaaaattaaagtcacacacaactgtgagatttcggattcgaatccggatcacgacgtccaatcttacaatttcgacatt 40932735  T
Q  376 tgtc 379  Q
    ||||    
T  40932734 tgtc 40932731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 22203780 - 22203722
Alignment:
Q  321 tgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||||| |||||||||||||| | ||||| | |||||||||||||| |||||||    
T  22203780 tgaggtctcggattcgaacccgggtcacgacgtctgaccttgcaatttcggtatttgtc 22203722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 42364694 - 42364805
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||||||| |||||||| ||||||||| | ||||||| ||||||||||||||||| |||  | |||| ||| |||||   ||  |||||| ||| ||||    
T  42364694 tttttgttg-tcttagataaagtggtaaactactgaaattaaactcacacacaactgtgaaatttcggattcaaaccc-aatcataacgtctggctttgc 42364791  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  42364792 aatttcggcatttg 42364805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 14400852 - 14400781
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttc 335  Q
    ||||| || ||||||||||||||||||| |||||  || ||||||||| ||||| | ||||||| |||||||    
T  14400852 tttttttttgtcttagatgaagtggtaaaccacttgaattaaactcactcacaattgtgaggtcccgggttc 14400781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 6e-47; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 45874192 - 45874077
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  45874192 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 45874093  T
Q  364 aatttcggcatttgtc 379  Q
    ||||| ||||||||||    
T  45874092 aattttggcatttgtc 45874077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 34739417 - 34739304
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  34739417 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 34739318  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  34739317 aatttcggcatttg 34739304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 23417474 - 23417587
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||||| ||||||||||||||||    
T  23417474 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgc 23417573  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  23417574 aattttggcatttg 23417587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 28798379 - 28798492
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| | ||||||||||||||    
T  28798379 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgc 28798478  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  28798479 aatttcggcatttg 28798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 43139897 - 43140010
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  43139897 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 43139996  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  43139997 aatttcggcatttg 43140010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 12735568 - 12735453
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||||||| |||||| |    
T  12735568 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtctggccttac 12735469  T
Q  364 aatttcggcatttgtc 379  Q
    ||||| ||||||||||    
T  12735468 aattttggcatttgtc 12735453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 1174088 - 1173975
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||   ||||||||||||||    
T  1174088 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgc 1173989  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  1173988 aatttcggcatttg 1173975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 19849494 - 19849607
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||| || | ||||||||||||||    
T  19849494 ttttttttggtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgc 19849593  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  19849594 aatttcggcatttg 19849607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 26424849 - 26424961
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   |||||| |||||||    
T  26424849 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtcc-gccttgc 26424947  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  26424948 aatttcggcatttg 26424961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 53457961 - 53457848
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||   ||||||| ||||||    
T  53457961 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgc 53457862  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  53457861 aatttcggcatttg 53457848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 54768423 - 54768536
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||  |||||||||||||||||   ||||||||||||||    
T  54768423 ttttttttggtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgc 54768522  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  54768523 aatttcggcatttg 54768536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 274 - 377
Target Start/End: Complemental strand, 55214779 - 55214676
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||    
T  55214779 tcttagataaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttggca 55214680  T
Q  374 tttg 377  Q
    ||||    
T  55214679 tttg 55214676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 12867978 - 12867865
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || | ||||||||| |||||| | ||||||| ||||||    
T  12867978 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgc 12867879  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  12867878 aatttcggcatttg 12867865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 18257466 - 18257353
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||||| ||   ||||||||||||||    
T  18257466 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgc 18257367  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  18257366 aatttcggcatttg 18257353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 374
Target Start/End: Original strand, 29581035 - 29581144
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||  |||| | ||||||||||||||    
T  29581035 tttttttttgtcttagatgaagtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgc 29581133  T
Q  364 aatttcggcat 374  Q
    |||||||||||    
T  29581134 aatttcggcat 29581144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 377
Target Start/End: Original strand, 238457 - 238562
Alignment:
Q  272 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 371  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||    ||||| |||||||||||||||    
T  238457 ggtcttcgatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcgg 238556  T
Q  372 catttg 377  Q
    ||||||    
T  238557 catttg 238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 22608122 - 22608007
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||| ||||||||| |||||||| ||||| |||||||| |||||||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  22608122 tttttttttgtctcagatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgc 22608023  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||| ||| ||||    
T  22608022 aatttcgacatctgtc 22608007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 376
Target Start/End: Complemental strand, 55400356 - 55400253
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||  || ||||||| |||| ||   |||||||||||||||||||||||    
T  55400356 gtcttagatgaagtggtaatccactgaaaataaactcacatacaactatgaggttccgagttcgaatccggatcatgacgtccggccttgcaatttcggc 55400257  T
Q  373 attt 376  Q
    ||||    
T  55400256 attt 55400253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 282 - 376
Target Start/End: Complemental strand, 39807963 - 39807869
Alignment:
Q  282 gaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||| |||||| | | ||| |||||||||||||||||||||    
T  39807963 gaagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgagttcgaactcgggtcacgatgtctggccttgcaatttcggcattt 39807869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 19225396 - 19225283
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||| ||||| | ||||||| ||||||||||||||| ||   ||||||||| || |    
T  19225396 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacgcacaattgtgaggtcccgggttcgaacccggatcatgacgtccggctttac 19225297  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  19225296 aatttcggcatttg 19225283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 369
Target Start/End: Original strand, 19673920 - 19674025
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||| |||||||||||||||||||||| ||||||| |||| || | ||||||| ||||||||||||| |||| |||||| |||||||||    
T  19673920 tttttttttgtcttaaatgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacccaggtcacaacgttcggccttgc 19674019  T
Q  364 aatttc 369  Q
    ||||||    
T  19674020 aatttc 19674025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 11278115 - 11278006
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||    ||| ||||||| |||||| |||||||||||   | ||||||||||||    
T  11278115 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcaca----actgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgc 11278020  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  11278019 aatttcggcatttg 11278006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 277 - 376
Target Start/End: Original strand, 23710337 - 23710436
Alignment:
Q  277 tagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    ||||||||||||||||||||||||| |||||||||||  |||| ||||||  | |||||||| ||||||| | ||||||||||||||||||||| |||||    
T  23710337 tagatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatttcgacattt 23710436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 2864738 - 2864852
Alignment:
Q  263 atttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 362  Q
    |||||| || || |||||||||||||||| ||  ||||| ||| ||||||||||||||||||||    |||||||||||||||| | |||||| ||||||    
T  2864738 atttttttttgtgttagatgaagtggtaaacctttgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttg 2864837  T
Q  363 caatttcggcatttg 377  Q
    |||||| ||||||||    
T  2864838 caatttaggcatttg 2864852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 50033519 - 50033405
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtcc-ggccttg 362  Q
    ||||| || |||||| ||||||||||||| || ||||| |||||| |||||||||| ||| |||||  ||||||||||||||| |||||||| | | |||    
T  50033519 tttttttttgtcttatatgaagtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacccgggtcacaacgtccagtctttg 50033420  T
Q  363 caatttcggcatttg 377  Q
    |||||||||||||||    
T  50033419 caatttcggcatttg 50033405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 19814242 - 19814129
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||| ||||||||||||||||| ||||||| |||||||||||| || | ||||||| | |||| |||||| |||| | |||||||||||| |    
T  19814242 tttttttttgtcatagatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggccttac 19814143  T
Q  364 aatttcggcatttg 377  Q
    |||||| |||||||    
T  19814142 aatttctgcatttg 19814129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 369
Target Start/End: Original strand, 24417869 - 24417974
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||| || |||||||||||||||| ||| ||||||||  ||||||| ||||||||||| |||||||||||||| | |||||  |||||||    
T  24417869 tttttttttgtcttggaagaagtggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtcgtgccttgc 24417968  T
Q  364 aatttc 369  Q
    ||||||    
T  24417969 aatttc 24417974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 24517972 - 24518089
Alignment:
Q  262 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 361  Q
    ||||||| || |||| |||| |||||||||| || | ||| |||||||||||| || | |||| | |||||||||||| |||||| |||||||||| |||    
T  24517972 tatttttttttgtctgagattaagtggtaattcattaaaattaaactcacacataattgtgagatttcgggttcgaacacgggtcacaacgtccggtctt 24518071  T
Q  362 gcaatttcggcatttgtc 379  Q
     ||||||| |||||||||    
T  24518072 acaatttcagcatttgtc 24518089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 33770708 - 33770628
Alignment:
Q  260 tatatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 341  Q
    ||||||||| ||| |||||||||||| ||||| ||||||||| ||||||||||||||||| ||| ||| |||||||||||||    
T  33770708 tatattttttttg-tcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaaccc 33770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 377
Target Start/End: Original strand, 49030754 - 49030842
Alignment:
Q  288 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    |||||||||||||  ||||||||||||||||| |||||| || ||||||||| ||| || | ||||||||||||||||||||| ||||||    
T  49030754 gtaatccactgaagttaaactcacacacaactatgaggt-tccggttcgaactcggatcacgacgtccggccttgcaatttcgacatttg 49030842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 1966687 - 1966611
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 340  Q
    ||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| ||  ||||||||    
T  1966687 tttttttttgtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacc 1966611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 379
Target Start/End: Complemental strand, 32778238 - 32778147
Alignment:
Q  286 tggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    |||||||||||| ||||||||||||||||  | | |||||||||| |||||||||||| || | ||||||| ||||||||||| || |||||||    
T  32778238 tggtaatccactaaaaataaactcacaca--attgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaattttggtatttgtc 32778147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 377
Target Start/End: Complemental strand, 37134166 - 37134072
Alignment:
Q  283 aagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    ||||||||| ||||||||| ||||||||||||||||| ||| || |||||||||||||||| ||   || |||| ||||| |||||| |||||||    
T  37134166 aagtggtaaaccactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatttcagcatttg 37134072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 51287739 - 51287623
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 362  Q
    ||||| || |||||||||||| ||||||| |||||||| |||| ||||||||||||| |||||| |||||||  ||||| | || | ||||| | ||||     
T  51287739 tttttttttgtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggtttcgggtttaaacccagatcacgacgtctgacctta 51287640  T
Q  363 caatttcggcatttgtc 379  Q
    |||||| ||||||||||    
T  51287639 caattttggcatttgtc 51287623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 368
Target Start/End: Original strand, 516457 - 516551
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaattt 368  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| | |||| ||  |||||| ||| || ||| ||||||||  |||||||||||    
T  516457 tcttagatgaagctgtaatccaccgaaaataaactcacacacaattgtgagatcctgggttcaaactcgagtcacaacgtccaaccttgcaattt 516551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 2804647 - 2804544
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    ||||| |||||||||||||||||| ||| |||||||||| | ||||   |||||   |||||||||||||||| ||||||||| |||| ||||||  |||    
T  2804647 tcttaaatgaagtggtaatccacttaaattaaactcacataaaacta--aggtcctaggttcgaacccgggtcacaacgtccgaccttacaattttagca 2804550  T
Q  374 tttgtc 379  Q
    ||||||    
T  2804549 tttgtc 2804544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 376
Target Start/End: Complemental strand, 12767214 - 12767112
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    ||||||||||||  |||| ||| ||||| ||||||||||||||||| |||||| |||| ||||||||| | ||   |||||||  ||| |||||||||||    
T  12767214 tcttagatgaagcagtaaaccagtgaaattaaactcacacacaactgtgaggtttcggattcgaacccagatcatgacgtccgatcttacaatttcggca 12767115  T
Q  374 ttt 376  Q
    |||    
T  12767114 ttt 12767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 22910269 - 22910363
Alignment:
Q  285 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||| | ||||| |||||| | |||||||| |||| || | |||||||||||||||| | ||||||| ||||||||||||| | ||||||    
T  22910269 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtc 22910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 379
Target Start/End: Complemental strand, 22968253 - 22968159
Alignment:
Q  285 gtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||| | ||||| |||||| | |||||||| |||| || | |||||||||||||||| | ||||||| ||||||||||||| | ||||||    
T  22968253 gtggtaatctattgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatttcgacttttgtc 22968159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 31015119 - 31015057
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 326  Q
    ||||| || |||||||||||||||||||  |||||||| ||||||||||||||||| ||||||    
T  31015119 tttttttttgtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggt 31015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 52171981 - 52172043
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 326  Q
    ||||| ||||||||| || ||||||||||||||||||| ||||||||||||||| | ||||||    
T  52171981 ttttttttggtcttaaataaagtggtaatccactgaaattaaactcacacacaattgtgaggt 52172043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 37620753 - 37620677
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 341  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||||||||| | || |||  || |||||||||||||    
T  37620753 tttttgttg-tctttgatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaaccc 37620677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 52768292 - 52768404
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||||| |||| ||   ||||||||  ||  || | ||||||| ||||||    
T  52768292 ttttttttggtcttagatgaa-tggtaatccattgaaattaaactcacacacaactgtgagatccttggttcgaattcgaatcacgacgtccgaccttgc 52768390  T
Q  364 aatttcggcatttg 377  Q
    | |||| |||||||    
T  52768391 agtttcagcatttg 52768404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 50347320 - 50347372
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacaca 316  Q
    ||||| || ||||||||||| ||||||||||||||||| ||||||||||||||    
T  50347320 tttttttttgtcttagatgaggtggtaatccactgaaattaaactcacacaca 50347372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 370
Target Start/End: Complemental strand, 3465842 - 3465783
Alignment:
Q  311 cacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 370  Q
    ||||||||| ||||||| || ||||||||| || || |||||||||||||||||||||||    
T  3465842 cacacaactatgaggtcccgagttcgaacctggatcacaacgtccggccttgcaatttcg 3465783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 2075642 - 2075565
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 341  Q
    ||||| || ||||||||| ||||| |||  || ||||| |||||||||||| |||| ||||||| |||||||||||||    
T  2075642 tttttttttgtcttagataaagtgataaatcattgaaattaaactcacacataactgtgaggtcccgggttcgaaccc 2075565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 32441119 - 32441188
Alignment:
Q  308 tcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    |||| ||||||| ||||||| ||||||||||||||||||   | ||| ||||||||||||||| ||||||    
T  32441119 tcacgcacaactgtgaggtcccgggttcgaacccgggtcatgatgtctggccttgcaatttcgacatttg 32441188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 23532172 - 23532129
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaact 319  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||    
T  23532172 ttagaagaagtggtaattcactgaaattaaactcacacacaact 23532129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 16555444 - 16555382
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 326  Q
    ||||| || |||||||||||||||||||| || | ||| |||| |||||||||||| ||||||    
T  16555444 ttttttttcgtcttagatgaagtggtaattcattaaaattaaattcacacacaactgtgaggt 16555382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 48822940 - 48822890
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 324  Q
    ||||| |||||||||||||| | ||||| ||||||||||||||||| ||||    
T  48822940 tcttaaatgaagtggtaatctattgaaattaaactcacacacaactgtgag 48822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 1126014 - 1125953
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttc 335  Q
    |||||||||||||||||||  | ||||| |||||||| |||||||| |||| ||| ||||||    
T  1126014 tcttagatgaagtggtaatttattgaaattaaactcatacacaactgtgagatcttgggttc 1125953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Original strand, 16342826 - 16342855
Alignment:
Q  350 acgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||||||||||||||||||||||||    
T  16342826 acgtccggccttgcaatttcggcatttgtc 16342855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 379
Target Start/End: Original strand, 16887581 - 16887657
Alignment:
Q  303 taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    |||||||||||| |||| ||| |||||| ||| |||||| | || | ||||||||| ||| |||||| |||||||||    
T  16887581 taaactcacacataactgtgaagtctcgagtttgaacccagatcacgacgtccggctttgtaatttctgcatttgtc 16887657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 316
Target Start/End: Complemental strand, 19119258 - 19119214
Alignment:
Q  272 ggtcttagatgaagtggtaatccactgaaaataaactcacacaca 316  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  19119258 ggtcttagatggagtagtaaaccactgaaattaaactcacacaca 19119214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 56618 - 56505
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||    
T  56618 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgc 56519  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  56518 aatttcggcatttg 56505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 9e-46; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 26605761 - 26605648
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  26605761 ttttttttggtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 26605662  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  26605661 aatttcggcatttg 26605648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 34460506 - 34460391
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  34460506 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgc 34460407  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||||||||||||    
T  34460406 aatttcggcatttgtc 34460391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 10639597 - 10639710
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  10639597 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 10639696  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  10639697 aatttcggcatttg 10639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 37197601 - 37197714
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||| |||||||    
T  37197601 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgc 37197700  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  37197701 aatttcggcatttg 37197714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 377
Target Start/End: Complemental strand, 19537446 - 19537331
Alignment:
Q  262 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 361  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||||||||||||| || ||||||||||||||    
T  19537446 tattttttttggtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggcctt 19537347  T
Q  362 gcaatttcggcatttg 377  Q
    ||||||||||||||||    
T  19537346 gcaatttcggcatttg 19537331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 33083545 - 33083658
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  33083545 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 33083644  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  33083645 aatttcggcatttg 33083658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 11708815 - 11708702
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||| |||||||||||||| |    
T  11708815 ttttttttggtattagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttac 11708716  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  11708715 aatttcggcatttg 11708702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 23839996 - 23839883
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||| ||||||||||||||||    
T  23839996 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgc 23839897  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  23839896 aattttggcatttg 23839883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 11459852 - 11459739
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||   ||||||| ||||||    
T  11459852 ttttttttggtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgc 11459753  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  11459752 aatttcggcatttg 11459739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 45125156 - 45125269
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  || ||||||||||  ||| |||||||||||||| |    
T  45125156 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttac 45125255  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  45125256 aatttcggcatttg 45125269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 29659207 - 29659322
Alignment:
Q  262 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 361  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| || |||||||    
T  29659207 tatttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacccgggtcacaatgttcggcctt 29659306  T
Q  362 gcaatttcggcatttg 377  Q
     |||||| ||||||||    
T  29659307 acaattttggcatttg 29659322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 263 - 377
Target Start/End: Complemental strand, 19816358 - 19816244
Alignment:
Q  263 atttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 362  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||| ||||||||  |||||  ||||||| |||||||||| |||||||||||||||    
T  19816358 attttttttggtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttg 19816259  T
Q  363 caatttcggcatttg 377  Q
    ||||||||| |||||    
T  19816258 caatttcggtatttg 19816244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 260 - 377
Target Start/End: Original strand, 11816538 - 11816655
Alignment:
Q  260 tatatttttgttggtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggc 358  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||| |||||| ||||||  ||||||||||||| |||| | ||||||| |    
T  11816538 tatattttt-ttggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgac 11816636  T
Q  359 cttgcaatttcggcatttg 377  Q
    |||||||||||||||||||    
T  11816637 cttgcaatttcggcatttg 11816655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 19048891 - 19048778
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |    
T  19048891 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttac 19048792  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  19048791 aatttcggcatttg 19048778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 39535525 - 39535638
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||||||||||||| || ||| |||||||||| | |||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  39535525 tttttttttgtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgc 39535624  T
Q  364 aatttcggcatttg 377  Q
    ||||||| ||||||    
T  39535625 aatttcgacatttg 39535638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 38440197 - 38440303
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||| ||| |||||||||||| | ||  |||||||| |||||| | ||||||| | |||||||||||||||||||||||    
T  38440197 gtcttagatgaagtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaatttcggc 38440296  T
Q  373 atttgtc 379  Q
    |||||||    
T  38440297 atttgtc 38440303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 4851451 - 4851348
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 369  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||| |||||||| || | ||||||||| || |||||||    
T  4851451 ttggtcttggatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacccggatcacgacgtccggctttacaatttc 4851352  T
Q  370 ggca 373  Q
    ||||    
T  4851351 ggca 4851348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 43778468 - 43778574
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||  ||||||||||| |||| | || | |||| ||||||||||||     
T  43778468 gtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaacccaggtcacgacattcggctttgcaatttcggt 43778567  T
Q  373 atttgtc 379  Q
    |||||||    
T  43778568 atttgtc 43778574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 39831435 - 39831547
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| | ||||||||||||| ||   ||||||||||||||    
T  39831435 tttttttttgtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtc-ccggttcgaacccggatcatgacgtccggccttgc 39831533  T
Q  364 aatttcggcatttg 377  Q
    |||||||| |||||    
T  39831534 aatttcggtatttg 39831547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 7275877 - 7275989
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||| | ||| |||| | |||||||||| ||||||| |||||||||||||||| | | || |||| ||||||    
T  7275877 tttttttttgtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgc 7275976  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  7275977 aatttcggcattt 7275989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 15782715 - 15782612
Alignment:
Q  275 cttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 374  Q
    ||||||||||||||||| ||||||||| ||||||| |||||| || | ||||||||||||||||||||||||   ||||||| |||| ||||||||||||    
T  15782715 cttagatgaagtggtaaaccactgaaattaaactcccacaca-ctgtaaggtctcgggttcgaacccgggtcatgacgtccgaccttacaatttcggcat 15782617  T
Q  375 ttgtc 379  Q
    |||||    
T  15782616 ttgtc 15782612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 27137909 - 27138023
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| | |||| | ||||| ||||||||||||| |||| | | || ||||||| |    
T  27137909 ttttttttggtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggcctt-c 27138007  T
Q  364 aatttcggcatttgtc 379  Q
    |||||| |||||||||    
T  27138008 aatttcagcatttgtc 27138023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 276 - 376
Target Start/End: Complemental strand, 16654488 - 16654388
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||||||| || ||| |||| ||||||||||||||||||||| ||||||  ||||||||||| ||| || |  |||||||||||||||||||||||||    
T  16654488 ttagatgaaggggcaattcactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttcggcatt 16654389  T
Q  376 t 376  Q
    |    
T  16654388 t 16654388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 270 - 377
Target Start/End: Complemental strand, 34234659 - 34234554
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 369  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||  ||| ||||||||||||||| ||| | | || |||| |||| ||||||||||||    
T  34234659 ttggtcttagatgaagtggtgatctactgaaattaaactcacaca--actatgaggtctcgggttcaaactcagatcacaacatccgaccttgcaatttc 34234562  T
Q  370 ggcatttg 377  Q
    ||||||||    
T  34234561 ggcatttg 34234554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 276 - 379
Target Start/End: Original strand, 40786212 - 40786315
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    ||||| |||||| |||| |||| ||| ||||||||||| |||||  |||||||  |||||||||| ||||| | ||||||||||||||||||||||||||    
T  40786212 ttagaagaagtgataattcactaaaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaatttcggcatt 40786311  T
Q  376 tgtc 379  Q
    ||||    
T  40786312 tgtc 40786315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 43684194 - 43684091
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||||||||||||||||| |||||||||||||||||| || | || |||| |||||||||||||  |||     ||||||||||||||||||||||||    
T  43684194 ttagatgaagtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaatttcggcatt 43684095  T
Q  376 tgtc 379  Q
    ||||    
T  43684094 tgtc 43684091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 326
Target Start/End: Complemental strand, 42578296 - 42578243
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt 326  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 42578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 7349223 - 7349122
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||||||||||| ||||||| ||| |||||||||||| |  | ||||||||||| ||||||| ||| || | ||||||||||||||||| || |||||    
T  7349223 ttagatgaagtggtgatccactaaaattaaactcacacatagttgtgaggtctcggattcgaactcggatcacgacgtccggccttgcaatatcagcatt 7349124  T
Q  376 tg 377  Q
    ||    
T  7349123 tg 7349122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 44181887 - 44181993
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||| |||| || ||| |||||| ||   || |||| | || |||| ||||||| ||    
T  44181887 gtcttagattaagtgataatccactgaaaataaactcacacacaactgtgagatcccggattcgaatccaaatcacaacattcgaccttacaatttcagc 44181986  T
Q  373 atttgtc 379  Q
    |||||||    
T  44181987 atttgtc 44181993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 4801001 - 4800900
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    ||||||||||||||||| ||||| || |||||||||||| |||   |||||  ||||||||||| | |||| | |||||| |||||||||||||| ||||    
T  4801001 ttagatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaactcaggtcacgacgtccagccttgcaatttcgacatt 4800902  T
Q  376 tg 377  Q
    ||    
T  4800901 tg 4800900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 42025808 - 42025692
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataa-actcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 362  Q
    ||||| || |||||||||||||||||| |||||||||| ||| |||||||||||| | ||||||   |||||||||| | |||| | || |||||||||     
T  42025808 tttttttttgtcttagatgaagtggtagtccactgaaattaagactcacacacaattgtgaggttctgggttcgaactcaggtcacgacatccggcctta 42025709  T
Q  363 caatttcggcatttgtc 379  Q
     ||||||| ||||||||    
T  42025708 aaatttcgacatttgtc 42025692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 276 - 346
Target Start/End: Original strand, 40825161 - 40825231
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 346  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||   || |||||| ||||||||||||||    
T  40825161 ttagatgaagtgataatccattgaaaataaactcacacacacctggaagatctcggattcgaacccgggtc 40825231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 21312331 - 21312229
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||| | ||||||| | ||||||| ||| | || |||||||||| ||| |||||| | |    
T  21312331 gtcttagatgaagtggtaattcactaaaaataaactca--cacaattgtgaggtcccaggttcgatcccagatcacaacgtccggtcttacaattttgac 21312234  T
Q  373 atttg 377  Q
    |||||    
T  21312233 atttg 21312229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 341
Target Start/End: Complemental strand, 33001839 - 33001762
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 341  Q
    ||||| || |||||||||||| |||||||||||||||| |||||||||| | |||| |||||||  | ||||||||||    
T  33001839 tttttttttgtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtcctgtgttcgaaccc 33001762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Original strand, 15344966 - 15345016
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 324  Q
    ||||| ||||| |||| |||||||||||||||| |||||||||||||||||    
T  15344966 tcttaaatgaaatggtgatccactgaaaataaattcacacacaactctgag 15345016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 6054991 - 6055111
Alignment:
Q  259 ttatatttttgttggtcttagatgaagt-ggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccgg 357  Q
    |||| ||||||||| |||||||| |||| ||||||||||| ||| |||||||||||||| || |||||||  | ||||||| |||  |  | |||| ||     
T  6054991 ttatttttttgttg-tcttagataaagtaggtaatccactaaaattaaactcacacacagctatgaggtcctgagttcgaatccgaattacgacgttcga 6055089  T
Q  358 ccttgcaatttcggcatttgtc 379  Q
    ||||||||||| ||||||||||    
T  6055090 ccttgcaattttggcatttgtc 6055111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 33564900 - 33565010
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||| |||||| || | |||| ||| ||||| ||||||||||||  ||| | ||||||||||||||||||  |||| | |||||| ||||| |    
T  33564900 ttttttttggttttagattaaatagtaagccattgaaattaaactcacaca--actataaggtctcgggttcgaacctaggtcacgacgtccagccttac 33564997  T
Q  364 aatttcggcattt 376  Q
    ||||||| |||||    
T  33564998 aatttcgacattt 33565010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 376
Target Start/End: Complemental strand, 38400567 - 38400494
Alignment:
Q  303 taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    ||||||| ||||||||| |||||||  || ||||||||| |||| | |||||||  ||||||||||||||||||    
T  38400567 taaactcgcacacaactatgaggtcctggattcgaaccctggtcacgacgtccgatcttgcaatttcggcattt 38400494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 379
Target Start/End: Complemental strand, 15072204 - 15072115
Alignment:
Q  289 taatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||||||| ||||| ||||||||| | ||||||| |||||||||| |||| || | || ||| || |||||||||||  |||||||    
T  15072204 taatccactgaaattaaacacacacacaa-tatgaggtcccgggttcgaatccggatcacgacatccagctttgcaatttcgatatttgtc 15072115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 20497592 - 20497657
Alignment:
Q  275 cttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 340  Q
    ||||||||||||||||| |||||||||  ||||||||| |||| | ||||||  |||||| |||||    
T  20497592 cttagatgaagtggtaaaccactgaaataaaactcacatacaattgtgaggttccgggtttgaacc 20497657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 34239811 - 34239924
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||| |||||||||||||  | ||||| |||||||| |||||||| | ||||   | |||||||| || ||| | ||||| | |||| |    
T  34239811 tttttttttgtcttaaatgaagtggtaatttattgaaattaaactcatacacaactgtaaggttctgagttcgaactcgagtcacgacgtctgaccttac 34239910  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  34239911 aatttcggcatttg 34239924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 377
Target Start/End: Original strand, 25501839 - 25501887
Alignment:
Q  329 cgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    ||||||||||||  |||| | |||||||||||||||||||| |||||||    
T  25501839 cgggttcgaacctaggtcacgacgtccggccttgcaatttcagcatttg 25501887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 34093363 - 34093259
Alignment:
Q  276 ttagatgaagtggtaa-tccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 374  Q
    |||||||||||||||| |||||||||| |||||||| ||| |  | ||| |||||||||| ||| | || || ||||||||| ||||  ||||| | |||    
T  34093363 ttagatgaagtggtaagtccactgaaattaaactcatacatatttgtgatgtctcgggtttgaatctggatcacaacgtccgaccttaaaattttgacat 34093264  T
Q  375 ttgtc 379  Q
    |||||    
T  34093263 ttgtc 34093259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 41780473 - 41780417
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatcc-actgaaaataaactcacacacaact 319  Q
    ||||| || ||||||||||||| |||||||| ||||||| ||||| |||||||||||    
T  41780473 tttttttttgtcttagatgaagcggtaatcccactgaaattaaacccacacacaact 41780417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 2146773 - 2146661
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  2146773 ttttttttggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgc 2146674  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  2146673 aatttcggcattt 2146661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 259 - 377
Target Start/End: Complemental strand, 23358327 - 23358209
Alignment:
Q  259 ttatatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggc 358  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||    
T  23358327 ttatattttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggc 23358228  T
Q  359 cttgcaatttcggcatttg 377  Q
    ||||||||||||| |||||    
T  23358227 cttgcaatttcggtatttg 23358209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 4106875 - 4106762
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  4106875 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 4106776  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  4106775 aatttcggcatttg 4106762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 40058375 - 40058262
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  40058375 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 40058276  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  40058275 aattttggcatttg 40058262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 44084077 - 44083964
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  44084077 ttttttttggttttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgc 44083978  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  44083977 aattttggcatttg 44083964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 4107446 - 4107333
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  4107446 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgc 4107347  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  4107346 aatttcggcatttg 4107333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 31770523 - 31770636
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   || |||||||||||    
T  31770523 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgc 31770622  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  31770623 aatttcggcatttg 31770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 259 - 372
Target Start/End: Original strand, 47570704 - 47570817
Alignment:
Q  259 ttatatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggc 358  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||   |||||||||    
T  47570704 ttattttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggc 47570803  T
Q  359 cttgcaatttcggc 372  Q
    ||||||||||||||    
T  47570804 cttgcaatttcggc 47570817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 47250242 - 47250355
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || | ||||||||||||||||   ||||||||||||||    
T  47250242 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgc 47250341  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  47250342 aatttcggcatttg 47250355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 25546266 - 25546378
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||   ||||||||||||||    
T  25546266 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgc 25546365  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  25546366 aatttcggcattt 25546378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 8439215 - 8439102
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||| ||||||| ||||||||| ||||||    
T  8439215 tttttttttgtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgc 8439116  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  8439115 aattttggcatttg 8439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 25112238 - 25112351
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||| ||||   ||||||| ||||||    
T  25112238 ttttttttggtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgc 25112337  T
Q  364 aatttcggcatttg 377  Q
    |||||||| |||||    
T  25112338 aatttcggtatttg 25112351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 264 - 369
Target Start/End: Original strand, 38781199 - 38781304
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| | || | |||||||||    
T  38781199 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacgacattcggccttgc 38781298  T
Q  364 aatttc 369  Q
    ||||||    
T  38781299 aatttc 38781304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 7162781 - 7162892
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||||||||||  ||||||| | ||||||| || ||||||||||||||| |||||||||||||| |    
T  7162781 tttttttttgtcttagatgaagtggtaatccactgaaaataaact--cacacaattgtgaggtcccgagttcgaacccgggtcacaacgtccggccttac 7162878  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  7162879 aatttcggcatttg 7162892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 41183945 - 41183839
Alignment:
Q  271 tggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 370  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||| | |||||||||||| ||||   |||||||||||||||||||||    
T  41183945 tggtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacccaggtcaagacgtccggccttgcaatttcg 41183846  T
Q  371 gcatttg 377  Q
    |||||||    
T  41183845 gcatttg 41183839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 48146890 - 48146778
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||| | || || | ||||||    
T  48146890 ttttttttggtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgc 48146791  T
Q  364 aatttcggcattt 376  Q
    |||||| ||||||    
T  48146790 aatttctgcattt 48146778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 377
Target Start/End: Original strand, 5772818 - 5772923
Alignment:
Q  272 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 371  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||| ||  ||||| ||||||||||||||    
T  5772818 ggtcttaaatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatttcgg 5772917  T
Q  372 catttg 377  Q
    ||||||    
T  5772918 catttg 5772923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 273 - 378
Target Start/End: Complemental strand, 11355951 - 11355846
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||| || |||||||||| || | ||  |||||||| |||||||||||||||    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaatccagatcataacgtccgaccttgcaatttcggc 11355852  T
Q  373 atttgt 378  Q
    ||||||    
T  11355851 atttgt 11355846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 27229484 - 27229584
Alignment:
Q  280 atgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 378  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcgacatttgt 27229583  T
Q  379 c 379  Q
    |    
T  27229584 c 27229584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 274 - 377
Target Start/End: Original strand, 43753754 - 43753858
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||| ||||||  ||||||||||||| |||| | |||||||||||||||||||||||    
T  43753754 tcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaatttcggc 43753853  T
Q  373 atttg 377  Q
    |||||    
T  43753854 atttg 43753858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 28603148 - 28603035
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||| | |||||||||| |||| | ||| ||||||||||||||| | |||| | ||||||||||||||    
T  28603148 tttttttttgtcttagatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaactcaggtcacgacgtccggccttgc 28603049  T
Q  364 aatttcggcatttg 377  Q
     |||||||||||||    
T  28603048 gatttcggcatttg 28603035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 377
Target Start/End: Complemental strand, 38033858 - 38033753
Alignment:
Q  272 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 371  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||| || |||||||| || ||| ||||| |||| |||||||||    
T  38033858 ggtcatagatgaagtggtactccactgaaaataaactcacacacaactgtgaggtcccggatttgaacccggatcacaatgtccgaccttacaatttcgg 38033759  T
Q  372 catttg 377  Q
    ||||||    
T  38033758 catttg 38033753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 377
Target Start/End: Complemental strand, 43203442 - 43203330
Alignment:
Q  265 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 364  Q
    |||| ||||||||| ||||||||  ||||||||| |||||||||||||||||||| | ||||| |||||||||||||||||| |  ||||| ||||| ||    
T  43203442 tttttttggtcttatatgaagtgaaaatccactgtaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacggcgtcccgccttaca 43203343  T
Q  365 atttcggcatttg 377  Q
    |||||||||||||    
T  43203342 atttcggcatttg 43203330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 5587417 - 5587302
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||  || | |||||||  |||||||||||||| || | | |||||| |||||    
T  5587417 ttttttttggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgc 5587318  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||||||||||||    
T  5587317 aatttcggcatttgtc 5587302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 5592378 - 5592263
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||| ||| |||||||||||  || | |||||||  |||||||||||||| || | | |||||| |||||    
T  5592378 ttttttttggtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgc 5592279  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||||||||||||    
T  5592278 aatttcggcatttgtc 5592263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 32606321 - 32606436
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||| ||||||| |||||||| |||| ||||| | |||| | |||||||||||||||||| ||||| | ||||||||||||||    
T  32606321 tttttttttgtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgc 32606420  T
Q  364 aatttcggcatttgtc 379  Q
    |||||||| |||||||    
T  32606421 aatttcggtatttgtc 32606436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 39513974 - 39514080
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||| ||||||||||||||||||| |||| |||||||||||| |||| | ||||| ||||||||||| |||||| | ||||||||||||||    
T  39513974 tttttttttgtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgc 39514073  T
Q  364 aatttcg 370  Q
    |||||||    
T  39514074 aatttcg 39514080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 47557918 - 47557806
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||  ||||||||||||||||||   |||| || |||||     
T  47557918 tttttttttgtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgt 47557819  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  47557818 aatttcggcattt 47557806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 15634868 - 15634983
Alignment:
Q  262 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 361  Q
    ||||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||| ||| ||  ||| |||||| ||||||| | ||||||| | ||    
T  15634868 tattttttttggctttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaagttccggtttcgaatccgggtcacgacgtccgacttt 15634967  T
Q  362 gcaatttcggcatttg 377  Q
     |||||||||||||||    
T  15634968 acaatttcggcatttg 15634983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 29484746 - 29484859
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||| |||||||| ||||||||||||| |||||||||| |||| | ||||||| ||||||| ||||| | ||   ||||||||||||||    
T  29484746 tttttttttgtcttatatgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgc 29484845  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  29484846 aatttcggcatttg 29484859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 43170939 - 43171045
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||| ||||||||||| ||||| |||||||||| ||||||  || ||||| | || ||||| ||||  | |||||||||||||||||||||||    
T  43170939 gtcttagatgacgtggtaatccattgaaattaaactcacatacaactgggaagtctccgatttgaacctgggttacgacgtccggccttgcaatttcggc 43171038  T
Q  373 atttgtc 379  Q
    |||||||    
T  43171039 atttgtc 43171045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 19630665 - 19630714
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19630665 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 19630714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 376
Target Start/End: Original strand, 27915568 - 27915684
Alignment:
Q  261 atatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac-ccgggtctcaacgtccggcc 359  Q
    |||||||| ||||||||||||||||||||||| || ||||| |||||||| |||||||| |||| |||  ||||||||| |  |||| | ||||||| ||    
T  27915568 atattttttttggtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgacc 27915667  T
Q  360 ttgcaatttcggcattt 376  Q
    |||||||||| ||||||    
T  27915668 ttgcaatttcagcattt 27915684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 4001835 - 4001945
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||| ||||| ||||||||||||   ||  |||||| || ||||||||||||||| | || |||||||||||    
T  4001835 tttttttttgtcttagatgaagtggtaaaccattgaaattaaactcacacag--ctgagaggtcccgagttcgaacccgggtcacgacatccggccttgc 4001932  T
Q  364 aatttcggcattt 376  Q
    ||||||| |||||    
T  4001933 aatttcgacattt 4001945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 48444143 - 48444255
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||||||||||| |||||||| |||||| |||||||||| ||| ||   |||||||||||| | || | |||||| | ||| |    
T  48444143 tttttttttgtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtgaagtacagggttcgaacccagatcacgacgtccagtcttac 48444242  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  48444243 aatttcggcattt 48444255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 262 - 368
Target Start/End: Original strand, 5462939 - 5463045
Alignment:
Q  262 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 361  Q
    ||||||| ||||||| ||||||||||||  |||| ||||| ||||||||||||||||| |||| |||| |||||||| |||| || |||| |||  | ||    
T  5462939 tattttttttggtctaagatgaagtggttctccattgaaattaaactcacacacaactgtgagatctcaggttcgaatccggatcacaacatccaacatt 5463038  T
Q  362 gcaattt 368  Q
    |||||||    
T  5463039 gcaattt 5463045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 273 - 377
Target Start/End: Original strand, 42081619 - 42081720
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||| |||||||||| |||||||||||||||  ||||||||| ||||||| | ||||||||||||| || |||||| ||  |||||||||| | |    
T  42081619 gtcttagataaagtggtaattcactgaaaataaact--cacacaactgtgaggtc-caggttcgaacccggatcacaacgttcgatcttgcaattttgac 42081715  T
Q  373 atttg 377  Q
    |||||    
T  42081716 atttg 42081720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 377
Target Start/End: Complemental strand, 13887282 - 13887195
Alignment:
Q  288 gtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    |||||||||||||| |||||||| |||  ||| ||||||  |||||||||||| ||||| | |||||||| ||||||| |||||||||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaagttcggcatttg 13887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 34763560 - 34763510
Alignment:
Q  283 aagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 333  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  34763560 aagtggtaatccactgaaattaaactcacacacaactgtgaggtcccgggt 34763510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 35577867 - 35577949
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc 346  Q
    ||||| || |||||||||||| | |||||||| ||||| |||||| |||||||| | ||| ||||||||||||||| ||||||    
T  35577867 tttttttttgtcttagatgaaattgtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaactcgggtc 35577949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 40657657 - 40657591
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 339  Q
    ||||||||||||||| ||||||||||||| ||||||| |||| |||| ||||||||| | |||||||    
T  40657657 gtcttagatgaagtgataatccactgaaattaaactcgcacataactatgaggtctcagattcgaac 40657591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 10220464 - 10220540
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaaccc 341  Q
    ||||| || |||||||||||| |||||| ||||||||| |||||||||||| |||| |||||| |||| |||||||||    
T  10220464 tttttttttgtcttagatgaa-tggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaaccc 10220540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 377
Target Start/End: Complemental strand, 25872892 - 25872787
Alignment:
Q  272 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 371  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||| | | |||||   |||||||||| || || | ||||||| ||||| ||| ||||    
T  25872892 ggtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacctggatcacgacgtccgaccttgtaatatcgg 25872793  T
Q  372 catttg 377  Q
    ||||||    
T  25872792 catttg 25872787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 369
Target Start/End: Complemental strand, 35309982 - 35309886
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 369  Q
    ||||||||||||||| ||| ||||||||| ||||||| ||||||| | |||| || ||| |||||| || ||||   |||||||||||| |||||||    
T  35309982 gtcttagatgaagtgataaaccactgaaattaaactcgcacacaattgtgagatcccggattcgaaaccaggtcaagacgtccggccttacaatttc 35309886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 31288224 - 31288275
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgag 324  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||| ||||    
T  31288224 gtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtgag 31288275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 339
Target Start/End: Original strand, 18506281 - 18506341
Alignment:
Q  278 agatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 339  Q
    |||||||| ||||| ||||||||| ||||||||||||| ||| ||| |||||||||||||||    
T  18506281 agatgaagcggtaaaccactgaaattaaactcacacac-actgtgaagtctcgggttcgaac 18506341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 379
Target Start/End: Complemental strand, 40643099 - 40642996
Alignment:
Q  269 gttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaattt 368  Q
    |||||||||||| ||| || ||||||||||||| ||||||||||  ||       ||||||||||| |||||||| || ||| ||| |||||| ||||||    
T  40643099 gttggtcttagacgaaatgataatccactgaaattaaactcacattca-------ggtctcgggtttgaacccggatcacaatgtctggccttacaattt 40643007  T
Q  369 cggcatttgtc 379  Q
    || ||||||||    
T  40643006 cgacatttgtc 40642996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 47960979 - 47961059
Alignment:
Q  297 tgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    ||||| |||||||||||||||||  |||||| ||||||||||||||| ||   ||||| | ||||| ||||| ||||||||    
T  47960979 tgaaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaattttggcatttg 47961059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 10626451 - 10626513
Alignment:
Q  277 tagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaac 339  Q
    ||||||||||||| ||||||| |||||||||||||| | |||| ||| || | ||||||||||    
T  10626451 tagatgaagtggtgatccactaaaaataaactcacatataactatgaagttttgggttcgaac 10626513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 23036208 - 23036244
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcaca 312  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  23036208 ttagatgaagtggtaatccattgaaattaaactcaca 23036244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 25049965 - 25050061
Alignment:
Q  280 atgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    ||||| |||||||||||| ||| |||||||||| |||||| |||| ||  | |||| || || |||| | ||||| | |||| ||||||||||||||    
T  25049965 atgaaatggtaatccacttaaattaaactcacatacaactgtgagatcatgagttcaaatccaggtcacgacgtctgacctttcaatttcggcattt 25050061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 853 - 966
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  853 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 952  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  953 aatttcggcatttg 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 13942 - 14055
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||    
T  13942 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgc 14041  T
Q  364 aatttcggcatttg 377  Q
    |||||||| |||||    
T  14042 aatttcggtatttg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 19622 - 19735
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || ||||||||||||||||    
T  19622 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgc 19721  T
Q  364 aatttcggcatttg 377  Q
    |||||||| |||||    
T  19722 aatttcggtatttg 19735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 13204094 - 13203981
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||| | ||||||||||||||    
T  13204094 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgc 13203995  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  13203994 aatttcggcatttg 13203981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 21018360 - 21018247
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||    
T  21018360 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgc 21018261  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  21018260 aattttggcatttg 21018247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 4824930 - 4825043
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||||||||||||||||    
T  4824930 ttttttttggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgc 4825029  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  4825030 aatttcggcatttg 4825043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 35317688 - 35317801
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||  |||||||| ||||||    
T  35317688 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgc 35317787  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  35317788 aatttcggcatttg 35317801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 264 - 374
Target Start/End: Original strand, 31909376 - 31909486
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||| ||||||||    
T  31909376 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtctggccttgc 31909475  T
Q  364 aatttcggcat 374  Q
    |||||| ||||    
T  31909476 aatttcagcat 31909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 12257493 - 12257380
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||||| |||| ||||||| |||||| |    
T  12257493 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacccaggtcacaacgtctggccttac 12257394  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  12257393 aatttcggcatttg 12257380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 273 - 376
Target Start/End: Complemental strand, 2971112 - 2971009
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| | |||| |||||||| |    
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtctgaccttacaatttcgac 2971013  T
Q  373 attt 376  Q
    ||||    
T  2971012 attt 2971009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 270 - 376
Target Start/End: Complemental strand, 29266006 - 29265900
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||| | || ||||| ||||||    
T  29266006 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacaacattcgaccttgtaatttc 29265907  T
Q  370 ggcattt 376  Q
    | |||||    
T  29265906 gacattt 29265900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 6021117 - 6021016
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||| ||||||| ||||||||||||| | ||||    
T  6021117 ttagataaagtggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaatccgggtcacaacgtcaggccttgcaattttgacatt 6021018  T
Q  376 tg 377  Q
    ||    
T  6021017 tg 6021016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 276 - 379
Target Start/End: Complemental strand, 40177749 - 40177646
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| ||  |||||| ||| || |||| ||||||||||||||||||||||| ||||    
T  40177749 ttagatgaagtggtaatccactgaaaataaactcacacacaacggtgaagttccgggttggaatccaggtcacaacgtccggccttgcaatttcgacatt 40177650  T
Q  376 tgtc 379  Q
    ||||    
T  40177649 tgtc 40177646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 377
Target Start/End: Original strand, 1191543 - 1191644
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    ||||||||||| |||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| || | ||||||||||||||||||||| ||||    
T  1191543 ttagatgaagttgtaagccactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgtcatt 1191642  T
Q  376 tg 377  Q
    ||    
T  1191643 tg 1191644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 379
Target Start/End: Complemental strand, 21112180 - 21112071
Alignment:
Q  270 ttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttc 369  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||  |||| | ||||  | ||||||||||||    
T  21112180 ttggtcttagatgatgtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacctaggtcacgacgtatgtccttgcaatttc 21112081  T
Q  370 ggcatttgtc 379  Q
    | ||||||||    
T  21112080 gacatttgtc 21112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 32143405 - 32143474
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 333  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  32143405 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 32143474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 376
Target Start/End: Complemental strand, 27721550 - 27721456
Alignment:
Q  282 gaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    |||||||||||||||||||| |||| ||||| |||||| ||||||| ||||||| |||||||||| | ||||||| | |||||||||||||||||    
T  27721550 gaagtggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcggcattt 27721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 8734134 - 8734020
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaa-ctcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 362  Q
    ||||| || ||||||||||||||||||||||||||||  |||| |||||  |||||| ||||||  ||||||||||||  |||| | |||||||||||||    
T  8734134 tttttttttgtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttg 8734035  T
Q  363 caatttcggcatttg 377  Q
    ||||||| |||||||    
T  8734034 caatttcagcatttg 8734020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 14270652 - 14270546
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||| |||||||||||||||||||| | |||||||| |||| ||||||||| |||  |||||| | |||||||   || ||||||||||    
T  14270652 gtcttagatgaagtgataatccactgaaaataaacttaaacacaactatgagatctcgggttggaatacgggtcacgacgtccgatttttcaatttcggc 14270553  T
Q  373 atttgtc 379  Q
    |||||||    
T  14270552 atttgtc 14270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 376
Target Start/End: Complemental strand, 23262672 - 23262573
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||    |||||||||    ||| |||| ||| ||||||||||||||||    
T  23262672 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac----gtcacaacatccagccttgcaatttcggc 23262577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 369
Target Start/End: Original strand, 28591341 - 28591446
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||| |||||||||||||| ||||||| | |||||||| |||||||| |||||| || |||| ||||||| ||| | ||||||||||||||    
T  28591341 tttttttttgtctaagatgaagtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgc 28591440  T
Q  364 aatttc 369  Q
    ||||||    
T  28591441 aatttc 28591446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 377
Target Start/End: Original strand, 3386894 - 3387004
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggt-----ct--cgggttcgaacccgggtctcaacgtccggccttgcaat 366  Q
    ||||||| |||||||||||||||||||| |||| |||||||||||| ||||||     ||  ||||||||||||||| |  | |||||||||||||||||    
T  3386894 tcttagaagaagtggtaatccactgaaattaaattcacacacaactttgaggttccgacttccgggttcgaacccggataacgacgtccggccttgcaat 3386993  T
Q  367 ttcggcatttg 377  Q
    |||||||||||    
T  3386994 ttcggcatttg 3387004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 17984731 - 17984811
Alignment:
Q  262 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccg 342  Q
    ||||||| ||||| |||||||||||| ||| ||||| ||| ||||||||||||||||| ||||||  ||||||||||||||    
T  17984731 tatttttattggttttagatgaagtgataagccactaaaattaaactcacacacaactgtgaggttccgggttcgaacccg 17984811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 35546061 - 35545955
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||| ||||||||| ||| ||||| |||| |||||| ||||||| | ||||||||  ||| || | |||| |||  |||||||||||||    
T  35546061 gtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaattcggatcacgacgttcggttttgcaatttcggc 35545962  T
Q  373 atttgtc 379  Q
    |||||||    
T  35545961 atttgtc 35545955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 2786398 - 2786295
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    |||||||||||||||||||||||||| || |||||||| |||||||| ||||||| | |||| |||  ||| || |  |||||| |||| ||||||||||    
T  2786398 gtcttagatgaagtggtaatccactg-aattaaactcatacacaactgtgaggtcccaggtttgaattcggatcacggcgtccgaccttacaatttcggc 2786300  T
Q  373 atttg 377  Q
    |||||    
T  2786299 atttg 2786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 11124789 - 11124676
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||| ||| ||||| |||| | || | ||||||   ||||||||| |  |||| | ||||||||||||||    
T  11124789 tttttttttgtcttagatgaagtggtaatccactcaaattaaacccacataaaattatgaggttctgggttcgaatcaaggtcacgacgtccggccttgc 11124690  T
Q  364 aatttcggcatttg 377  Q
    ||||| | ||||||    
T  11124689 aattttgacatttg 11124676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 376
Target Start/End: Complemental strand, 2756047 - 2755950
Alignment:
Q  279 gatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    ||||||| ||||| || || ||||||||| |||||||||||   |||||||| |||| || | || || | |||| ||||||||||||||||||||||    
T  2756047 gatgaaggggtaaaccgctaaaaataaacccacacacaactgctaggtctcgagttcaaaactggatcaccacgttcggccttgcaatttcggcattt 2755950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 377
Target Start/End: Original strand, 9576985 - 9577065
Alignment:
Q  297 tgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    ||||| |||||||||| |||||| ||||||   |||||||||||| ||||   ||||| |||||||||||||| |||||||    
T  9576985 tgaaattaaactcacatacaactgtgaggttctgggttcgaacccaggtcatgacgtctggccttgcaatttcagcatttg 9577065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 17465214 - 17465170
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaact 308  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||    
T  17465214 tttttttttgtcttagatgaagtggtaatccactgaaattaaact 17465170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 41580078 - 41580142
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacc 340  Q
    |||||||||||||||||||| | ||| |||||  |||||||||| |||||| |||| ||||||||    
T  41580078 ttagatgaagtggtaatccattaaaattaaacctacacacaactgtgaggtttcggattcgaacc 41580142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 19181847 - 19181793
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaact 319  Q
    ||||| || |||||| |||||||| ||||||||||||| |||||||||||||||||    
T  19181847 tttttttttgtcttaaatgaagtg-taatccactgaaattaaactcacacacaact 19181793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 4925723 - 4925673
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacaca 314  Q
    ||||| || ||||||||||||||||||| ||||||||| |||||| |||||    
T  4925723 tttttttttgtcttagatgaagtggtaaaccactgaaattaaacttacaca 4925673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 3049094 - 3049159
Alignment:
Q  313 cacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 378  Q
    ||||||| ||||||| |||||| |||  |||||| |  |||||||||||||||||| |||||||||    
T  3049094 cacaactgtgaggtcccgggtttgaaatcgggtcacggcgtccggccttgcaattttggcatttgt 3049159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 30127960 - 30127919
Alignment:
Q  335 cgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    |||||||||||| | | |||||||||||||||||||||||||    
T  30127960 cgaacccgggtcacgatgtccggccttgcaatttcggcattt 30127919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 2e-43; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 7824445 - 7824558
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  7824445 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 7824544  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  7824545 aatttcggcatttg 7824558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 43247641 - 43247754
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||| ||||||||||||||||    
T  43247641 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgc 43247740  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  43247741 aattttggcatttg 43247754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 29689471 - 29689586
Alignment:
Q  262 tatttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggcctt 361  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||    
T  29689471 tatttttttaggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggcctt 29689570  T
Q  362 gcaatttcggcatttg 377  Q
    ||||||||||||||||    
T  29689571 gcaatttcggcatttg 29689586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 54151672 - 54151785
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  54151672 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 54151771  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  54151772 aatttcggcatttg 54151785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 28844642 - 28844526
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaa-taaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 362  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  | |||||||||||||||| |||||||||||||||    
T  28844642 ttttttttggtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttg 28844543  T
Q  363 caatttcggcatttgtc 379  Q
    |||||||||||||||||    
T  28844542 caatttcggcatttgtc 28844526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 3112986 - 3113099
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||  | ||||||||||||||    
T  3112986 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgc 3113085  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  3113086 aatttcggcatttg 3113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 9349667 - 9349780
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || | ||||||| ||||||    
T  9349667 ttttttttggtgttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgc 9349766  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  9349767 aatttcggcatttg 9349780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 36228985 - 36229098
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||    
T  36228985 ttttttttggtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgc 36229084  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  36229085 aatttcggcatttg 36229098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 51665916 - 51666029
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||   ||||||||||||||    
T  51665916 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgc 51666015  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  51666016 aatttcggcatttg 51666029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 272 - 377
Target Start/End: Complemental strand, 54158395 - 54158290
Alignment:
Q  272 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||   ||||||||||||||||||||||    
T  54158395 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcgg 54158296  T
Q  372 catttg 377  Q
    ||||||    
T  54158295 catttg 54158290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 4601562 - 4601449
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||   ||||||||||||||    
T  4601562 tttttttttgtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgc 4601463  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  4601462 aatttcggcatttg 4601449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 279 - 377
Target Start/End: Original strand, 55018040 - 55018138
Alignment:
Q  279 gatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttg 377  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| | ||||||    
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttgacatttg 55018138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 52500975 - 52500862
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||||||||||| ||   |||||||||||| |    
T  52500975 ttttttttggtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacccggatcatgacgtccggccttac 52500876  T
Q  364 aatttcggcatttg 377  Q
    ||||||| ||||||    
T  52500875 aatttcgacatttg 52500862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 275 - 379
Target Start/End: Complemental strand, 1778977 - 1778873
Alignment:
Q  275 cttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcat 374  Q
    ||||||||||||||||||||| |||||||||| ||| |||||| | ||||||  |||||||||||||||||| ||| |||||||||||||||||||||||    
T  1778977 cttagatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttcggcat 1778878  T
Q  375 ttgtc 379  Q
    |||||    
T  1778877 ttgtc 1778873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 264 - 377
Target Start/End: Original strand, 42392796 - 42392909
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||| ||||| ||   ||||||| ||||||    
T  42392796 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgc 42392895  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  42392896 aatttcggcatttg 42392909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 274 - 377
Target Start/End: Original strand, 35461480 - 35461583
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    ||||||||||| || ||||| || |||||||||||||||||||||| ||||||  ||||||||||||||| || ||||||||| ||||||||||||||||    
T  35461480 tcttagatgaaatgataatctacagaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttcggca 35461579  T
Q  374 tttg 377  Q
    ||||    
T  35461580 tttg 35461583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 33334745 - 33334632
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||| |||||||| ||||| ||||||| ||||||||||||||||| ||||||| ||| ||||||| | |||| ||||||||||| ||||    
T  33334745 tttttttttgtcttatatgaagtgataatctactgaaattaaactcacacacaactgtgaggtcccggattcgaactcaggtcacaacgtccggctttgc 33334646  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  33334645 aatttcggcatttg 33334632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 377
Target Start/End: Complemental strand, 29750749 - 29750645
Alignment:
Q  272 ggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcgg 371  Q
    |||||||||||||||||||||||||||||  ||| ||||| ||||| | |||||||||  ||||||| ||||||| | |||||| |||||||||||||||    
T  29750749 ggtcttagatgaagtggtaatccactgaatttaa-ctcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaatttcgg 29750651  T
Q  372 catttg 377  Q
    ||||||    
T  29750650 catttg 29750645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 274 - 370
Target Start/End: Original strand, 38257304 - 38257400
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcg 370  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| | ||||||   |||||||||||| |||| | ||||||| |||||||||||||    
T  38257304 tcttagatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatttcg 38257400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 7958706 - 7958627
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgg 343  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||| ||||| |||| ||||||| |||||||||||||||    
T  7958706 ttttttttggtattagatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacccgg 7958627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 55320391 - 55320454
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtc 327  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55320391 tttttttttgtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtc 55320454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 41377716 - 41377608
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||      ||||||| |||||||||||| || ||   |||||||||||| |    
T  41377716 ttttttttggtcttagatgaagtggtaatccgctgaaaataaactcacaca-----gtgaggtcccgggttcgaacctggatcatgacgtccggccttac 41377622  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  41377621 aattttggcatttg 41377608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 475272 - 475383
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||||||||||| |||||||  ||||||||||||||||| ||||||  || |||||||||||| ||   ||||||| ||||||    
T  475272 ttttttttagtcttagatgaagtggtaattcactgaat-taaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgc 475370  T
Q  364 aatttcggcattt 376  Q
    |||||| ||||||    
T  475371 aatttcagcattt 475383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 32001415 - 32001527
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||| ||||||||||||  |||||||||||||||||||||||||| |||| ||||| ||||||||| || ||   | || ||||||| |    
T  32001415 tttttttttgtcttatatgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctggttcaagatgttcggccttac 32001514  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  32001515 aatttcggcattt 32001527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 43775351 - 43775247
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||| |||| |  ||| ||||||| |  ||| ||||||||| |||| ||||||||||    
T  43775351 gtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtccgaccttacaatttcggc 43775252  T
Q  373 atttg 377  Q
    |||||    
T  43775251 atttg 43775247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 376
Target Start/End: Original strand, 40756728 - 40756831
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtc-tcaacgtccggccttgcaatttcggc 372  Q
    |||||||||||||||||| | ||||||| ||||||||||| ||||| |||||||||||||||||| |||| || | | |||| | ||||||||||| |||    
T  40756728 tcttagatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaatccggatcatgatcgtctgaccttgcaattttggc 40756827  T
Q  373 attt 376  Q
    ||||    
T  40756828 attt 40756831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 367
Target Start/End: Original strand, 47635005 - 47635099
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatt 367  Q
    ||||||||||||||||||||| ||||||| |||||| ||||| ||||  ||||||  || ||||||||| |||| ||| ||||| ||||||||||    
T  47635005 gtcttagatgaagtggtaatcaactgaaattaaacttacacataactgcgaggtcctggattcgaacccaggtcacaatgtccgaccttgcaatt 47635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 278 - 376
Target Start/End: Complemental strand, 8151471 - 8151373
Alignment:
Q  278 agatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcattt 376  Q
    |||||||  ||||||||| ||||| |||||| ||||| |||| |||| |||||||||||||||||| || | |||| || | |||||||||| ||||||    
T  8151471 agatgaaccggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaacccggatcacgacgttcgtctttgcaatttcagcattt 8151373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 50729652 - 50729546
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||| | ||||| |||||||||| | ||||  ||||||||  ||||||| || | || | ||||| | |||| ||||||||||    
T  50729652 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50729553  T
Q  373 atttgtc 379  Q
    |||||||    
T  50729552 atttgtc 50729546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 50783197 - 50783303
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||| | ||||| |||||||||| | ||||  ||||||||  ||||||| || | || | ||||| | |||| ||||||||||    
T  50783197 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccagatcacgacgtctgaccttacaatttcggc 50783296  T
Q  373 atttgtc 379  Q
    |||||||    
T  50783297 atttgtc 50783303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 51054829 - 51054723
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||| ||| |||||| ||| |||| | |||||| | | |||||||||||  ||  ||||| || ||||| ||||||| |    
T  51054829 gtcttagatgaagtggtaatccacttaaattaaacttacaaacaattatgaggttttgagttcgaacccgaatcataacgttcgaccttgtaatttcgac 51054730  T
Q  373 atttgtc 379  Q
    |||||||    
T  51054729 atttgtc 51054723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 379
Target Start/End: Original strand, 448884 - 448981
Alignment:
Q  282 gaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    |||||||||||||||| ||| |||||||||| |||||| |||||||   ||||||||  ||| || | |||||||||||| |||||| | ||||||||    
T  448884 gaagtggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaattcggatcacgacgtccggccttacaattttgacatttgtc 448981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 2590801 - 2590847
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactca 310  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||    
T  2590801 tttttttttgtcttagatgaagtggtaatccactgaaattaaactca 2590847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 377
Target Start/End: Complemental strand, 53182858 - 53182757
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatt 375  Q
    |||||||||||||||| || || ||| |||||||||||| || | |||||| ||  |||| || |||| || ||||||| | |||||||||||| |||||    
T  53182858 ttagatgaagtggtaaacccctaaaattaaactcacacataattgtgaggtatcatgttcaaatccggatcacaacgtctgaccttgcaatttcagcatt 53182759  T
Q  376 tg 377  Q
    ||    
T  53182758 tg 53182757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 273 - 376
Target Start/End: Complemental strand, 27230794 - 27230692
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    |||| ||||||||||||||| |||||||| |||| |||||||||||| |||  || || ||| ||| || |||| | | ||| |||||||||||||| ||    
T  27230794 gtctgagatgaagtggtaattcactgaaattaaattcacacacaactgtga-atcccgagtttgaatccaggtcacgatgtctggccttgcaatttcagc 27230696  T
Q  373 attt 376  Q
    ||||    
T  27230695 attt 27230692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 378
Target Start/End: Original strand, 8137633 - 8137736
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||| ||||||||| ||| ||||| ||||||  ||||||||| |||||| || | ||| ||| ||||||   ||||||| |||||||||||  ||    
T  8137633 gtcttagataaagtggtaagccattgaaattaaact--cacacaactgtgaggtttcagattcaaactcgggtcatgacgtccgaccttgcaatttttgc 8137730  T
Q  373 atttgt 378  Q
    ||||||    
T  8137731 atttgt 8137736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 9965 - 10077
Alignment:
Q  265 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 364  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||||||||    
T  9965 tttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgca 10064  T
Q  365 atttcggcatttg 377  Q
    |||||||||||||    
T  10065 atttcggcatttg 10077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 6e-41; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 33704353 - 33704240
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  33704353 ttttttttggtcttaaatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 33704254  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  33704253 aatttcggcatttg 33704240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 33621631 - 33621518
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||   ||||||||||||||    
T  33621631 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgc 33621532  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  33621531 aatttcggcatttg 33621518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 21037427 - 21037315
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| |||||||||| ||| ||||||||||||||||    
T  21037427 ttttttttggtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggtc-cggattcgaacccgagtcacaacgtccggccttgc 21037329  T
Q  364 aatttcggcatttg 377  Q
    |||||| |||||||    
T  21037328 aatttcagcatttg 21037315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 264 - 379
Target Start/End: Complemental strand, 4464264 - 4464149
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| | ||||||||||||| ||   ||||||||||||||    
T  4464264 ttttttttggtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgc 4464165  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||||||||||||    
T  4464164 aatttcggcatttgtc 4464149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 28323069 - 28322956
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |    
T  28323069 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttac 28322970  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  28322969 aatttcggcatttg 28322956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 2959286 - 2959173
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| ||||||| ||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||   ||| | |  |||||||||||    
T  2959286 ttttttttggtctaagatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgc 2959187  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  2959186 aatttcggcatttg 2959173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 376
Target Start/End: Complemental strand, 16518558 - 16518448
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||  ||||||| |||| ||  |||||||||||| |||| ||||||||| ||||||    
T  16518558 tttttttttgtcttagatgaaatggtaatccactgaaaataaactca--cacaactgtgagctcctgggttcgaacccaggtcacaacgtccgaccttgc 16518461  T
Q  364 aatttcggcattt 376  Q
    ||||| |||||||    
T  16518460 aattttggcattt 16518448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 19145607 - 19145495
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||||||||||||| |||| |||||||||| | ||||||| ||||||| ||  |||||| | ||||||||||||||    
T  19145607 tttttttttgtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtcccgggttc-aaaacgggtcacgacgtccggccttgc 19145509  T
Q  364 aatttcggcatttg 377  Q
    |||||| |||||||    
T  19145508 aatttcagcatttg 19145495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 21000829 - 21000716
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||| |||||||||||||| ||||||||| ||||| ||||||||| | ||||||| ||||||||||||| ||||   |||| |||||||||    
T  21000829 tttttttttgtctcagatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgc 21000730  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  21000729 aatttcggcatttg 21000716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 381
Target Start/End: Original strand, 29009641 - 29009758
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||| | ||||||||  ||||||   |||||||||||| |    
T  29009641 tttttttttgtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaattcgggtcatgacgtccggccttac 29009740  T
Q  364 aatttcggcatttgtccg 381  Q
    || ||| |||||||||||    
T  29009741 aacttcagcatttgtccg 29009758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 35218631 - 35218700
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 333  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  35218631 ttttttttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggt 35218700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 273 - 379
Target Start/End: Original strand, 24619079 - 24619185
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||| | ||||||| |||| |||||| |||||| | |||| ||||||| |||||| | |    
T  24619079 gtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaattttgac 24619178  T
Q  373 atttgtc 379  Q
    |||||||    
T  24619179 atttgtc 24619185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 361148 - 361035
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||| ||||||||||||| |||||||||| | |||| ||||||  |||||||||||||| ||| | | || |||||||||    
T  361148 tttttttttgtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacgatgttcggccttgc 361049  T
Q  364 aatttcggcatttg 377  Q
    ||||| ||||||||    
T  361048 aattttggcatttg 361035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 273 - 377
Target Start/End: Complemental strand, 32289473 - 32289370
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||| |||||||||| |||||||  ||| || |||| ||||| ||||||||||||||    
T  32289473 gtctttgatgaagtggtaattcactgataataaacttacacacaactgtgaggtctcgagttcgaattcggatcacaacatccgg-cttgcaatttcggc 32289375  T
Q  373 atttg 377  Q
    |||||    
T  32289374 atttg 32289370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 11572110 - 11572031
Alignment:
Q  299 aaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgt 378  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||| |||||| ||||||| ||||||||    
T  11572110 aaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttctgcatttgt 11572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 12252150 - 12252045
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggca 373  Q
    ||||| |||||||||||| ||| | ||| ||||||||||||||||| ||||||||||||||| ||||| |||| | || ||||| |||||||| |||| |    
T  12252150 tcttaaatgaagtggtaagccattaaaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaatctcggta 12252051  T
Q  374 tttgtc 379  Q
    ||||||    
T  12252050 tttgtc 12252045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 28592119 - 28592188
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggt 333  Q
    ||||| || ||||||||| || |||||||||| ||||||||||||||||||||||| |||||||| ||||    
T  28592119 tttttttttgtcttagataaattggtaatccattgaaaataaactcacacacaactgtgaggtcttgggt 28592188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 584776 - 584887
Alignment:
Q  265 ttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgca 364  Q
    |||| ||||||||| ||||||||| ||||| ||||||  ||||||||| | || | ||||||| ||  |||||| ||||||| | ||||||| |||||||    
T  584776 tttttttggtcttatatgaagtggcaatcctctgaaatcaaactcacataaaattgtgaggtcccgaattcgaatccgggtcacgacgtccg-ccttgca 584874  T
Q  365 atttcggcatttg 377  Q
    |||||||||||||    
T  584875 atttcggcatttg 584887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 379
Target Start/End: Original strand, 32353932 - 32354046
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||| || |||||||| | ||||||||||||||||||||||| ||| ||| |  ||||||| ||| ||| ||||||||| ||||      
T  32353932 tttttttttgtcttagataaaatggtaatcaattgaaaataaactcacacacaactgtgaagtc-ccagttcgaatccgagtcacaacgtccgacctttg 32354030  T
Q  364 aatttcggcatttgtc 379  Q
    ||||| ||||||||||    
T  32354031 aattttggcatttgtc 32354046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 379
Target Start/End: Original strand, 10999416 - 10999514
Alignment:
Q  281 tgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||||||||||||||| |||||||||| |||||| |||| | | || |||| ||| || || |  |||||| ||||||| ||||||||||||||    
T  10999416 tgaagtggtaatccactgaaattaaactcacatacaactgtgagattttggattcgtacctggatcacttcgtccgaccttgcagtttcggcatttgtc 10999514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 7014313 - 7014380
Alignment:
Q  276 ttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgg 343  Q
    ||||||||||||||||| |||||||| |||||||||| | || | |||||| ||||||||||| ||||    
T  7014313 ttagatgaagtggtaatacactgaaattaaactcacataaaattatgaggtttcgggttcgaatccgg 7014380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 11456101 - 11456047
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtc 327  Q
    ||||||||||||||||||||| |||  |||||||||||||||||| | |||||||    
T  11456101 gtcttagatgaagtggtaatcgactagaaataaactcacacacaattatgaggtc 11456047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 22576318 - 22576244
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaa 338  Q
    ||||| || |||||||| ||||||||||| || |||||  ||||||||||| |||| ||||||  ||||||||||    
T  22576318 tttttttttgtcttagaagaagtggtaatacaatgaaatcaaactcacacataactgtgaggttccgggttcgaa 22576244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 273 - 379
Target Start/End: Complemental strand, 22291 - 22185
Alignment:
Q  273 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgcaatttcggc 372  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||||||| | |||||||||||| ||||||||||    
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaatttcggc 22192  T
Q  373 atttgtc 379  Q
    |||||||    
T  22191 atttgtc 22185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 114389 - 114276
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||||||||| ||   |||||||||||| |    
T  114389 tttttttttgtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttac 114290  T
Q  364 aatttcggcatttg 377  Q
    ||||||||||||||    
T  114289 aatttcggcatttg 114276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 264 - 377
Target Start/End: Complemental strand, 34956 - 34842
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaat-aaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttg 362  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||  ||||||  || |||||||||  ||| | |||||||||||||    
T  34956 ttttttttggtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttg 34857  T
Q  363 caatttcggcatttg 377  Q
    |||||||||||||||    
T  34856 caatttcggcatttg 34842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 376
Target Start/End: Original strand, 8934 - 9046
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaactcacacacaactctgaggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    ||||| || |||||||||||||||||||  |||||||| ||||||||||||||||| |||||||   ||||||||||||  ||  ||||||| ||||| |    
T  8934 tttttttttgtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacccgaatcataacgtcccgccttac 9033  T
Q  364 aatttcggcattt 376  Q
    |||||||||||||    
T  9034 aatttcggcattt 9046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 274 - 379
Target Start/End: Complemental strand, 14632 - 14517
Alignment:
Q  274 tcttagatgaagtggtaatccactgaaaataaactcacacaca--------actctg--aggtctcgggttcgaacccgggtctcaacgtccggccttgc 363  Q
    |||||||| ||||||||||||||||||| ||||||||||||||        ||||||  ||||| ||||||||||||||| || | ||||||||||||||    
T  14632 tcttagattaagtggtaatccactgaaattaaactcacacacacatctgtgactctgtgaggtcccgggttcgaacccggatcacgacgtccggccttgc 14533  T
Q  364 aatttcggcatttgtc 379  Q
    ||||||| ||||||||    
T  14532 aatttcgacatttgtc 14517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 4455 - 4413
Alignment:
Q  264 tttttgttggtcttagatgaagtggtaatccactgaaaataaa 306  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  4455 ttttttttggtcttagatgaagtggtaatccactgaaaataaa 4413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 379
Target Start/End: Complemental strand, 50035 - 50006
Alignment:
Q  350 acgtccggccttgcaatttcggcatttgtc 379  Q
    ||||||||||||||||||||||||||||||    
T  50035 acgtccggccttgcaatttcggcatttgtc 50006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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