View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3140_high_1 (Length: 994)

Name: NF3140_high_1
Description: NF3140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3140_high_1
NF3140_high_1
[»] chr7 (64 HSPs)
chr7 (272-815)||(31963942-31964480)
chr7 (51-270)||(1049593-1049812)
chr7 (64-270)||(26804346-26804551)
chr7 (340-578)||(31949909-31950150)
chr7 (53-270)||(40837042-40837260)
chr7 (340-460)||(31976080-31976200)
chr7 (51-270)||(27306527-27306766)
chr7 (51-270)||(3878323-3878566)
chr7 (51-275)||(35375-35620)
chr7 (51-167)||(44438-44555)
chr7 (51-167)||(25542404-25542522)
chr7 (153-270)||(1047386-1047502)
chr7 (1-116)||(9027354-9027467)
chr7 (1-116)||(2935279-2935396)
chr7 (51-163)||(18567491-18567604)
chr7 (51-157)||(22392357-22392464)
chr7 (51-163)||(31435345-31435458)
chr7 (1-89)||(1606423-1606508)
chr7 (153-270)||(2935071-2935187)
chr7 (153-270)||(9027570-9027686)
chr7 (705-815)||(31975336-31975447)
chr7 (153-270)||(22136879-22136995)
chr7 (153-270)||(40551906-40552022)
chr7 (1-116)||(22108087-22108195)
chr7 (1-116)||(22137098-22137206)
chr7 (1-116)||(40549847-40549955)
chr7 (1-116)||(40552125-40552233)
chr7 (171-270)||(18567364-18567462)
chr7 (159-270)||(25542282-25542391)
chr7 (171-270)||(31435487-31435585)
chr7 (153-270)||(22107868-22107984)
chr7 (153-270)||(40549628-40549744)
chr7 (62-141)||(45366446-45366526)
chr7 (732-815)||(31948941-31949024)
chr7 (917-994)||(45623321-45623407)
chr7 (62-139)||(42006468-42006545)
chr7 (204-270)||(44315-44381)
chr7 (51-112)||(31156209-31156271)
chr7 (59-116)||(1047238-1047295)
chr7 (51-104)||(22251840-22251893)
chr7 (954-994)||(26643086-26643126)
chr7 (811-846)||(763847-763882)
chr7 (51-86)||(7092477-7092512)
chr7 (51-89)||(1849918-1849956)
chr7 (816-846)||(33798753-33798783)
chr7 (816-846)||(35737098-35737128)
chr7 (60-89)||(3035670-3035699)
chr7 (60-89)||(7349586-7349615)
chr7 (917-954)||(10209945-10209982)
chr7 (60-89)||(11757177-11757206)
chr7 (52-89)||(13099775-13099812)
chr7 (60-89)||(18345490-18345519)
chr7 (60-89)||(20299407-20299436)
chr7 (60-89)||(28485515-28485544)
chr7 (817-846)||(30884109-30884138)
chr7 (817-846)||(31660219-31660248)
chr7 (60-89)||(38393935-38393964)
chr7 (60-89)||(38396239-38396268)
chr7 (817-846)||(41910999-41911028)
chr7 (233-270)||(42006317-42006354)
chr7 (60-89)||(43253831-43253860)
chr7 (817-846)||(46358670-46358699)
chr7 (817-846)||(47340297-47340326)
chr7 (817-846)||(48830619-48830648)
[»] chr3 (83 HSPs)
chr3 (51-270)||(11162892-11163111)
chr3 (51-270)||(11170146-11170365)
chr3 (51-270)||(18097197-18097421)
chr3 (51-270)||(22114601-22114841)
chr3 (51-270)||(48361966-48362185)
chr3 (51-270)||(35777164-35777382)
chr3 (93-270)||(38889758-38889936)
chr3 (61-275)||(32218832-32219046)
chr3 (60-183)||(18162492-18162616)
chr3 (51-270)||(18099467-18099706)
chr3 (60-270)||(32264348-32264579)
chr3 (51-167)||(3859372-3859489)
chr3 (51-270)||(5191374-5191614)
chr3 (93-270)||(6719471-6719650)
chr3 (51-167)||(5522911-5523028)
chr3 (51-213)||(6066093-6066254)
chr3 (153-270)||(38210068-38210184)
chr3 (153-270)||(50493677-50493793)
chr3 (51-167)||(1321285-1321402)
chr3 (51-167)||(10084689-10084806)
chr3 (51-167)||(10191609-10191726)
chr3 (153-270)||(53896637-53896753)
chr3 (51-167)||(26720392-26720509)
chr3 (60-167)||(10956332-10956440)
chr3 (60-167)||(10958628-10958736)
chr3 (51-165)||(45882785-45882900)
chr3 (51-124)||(15780748-15780821)
chr3 (60-164)||(24177126-24177231)
chr3 (187-270)||(7606880-7606962)
chr3 (159-270)||(26720269-26720379)
chr3 (153-270)||(6063889-6064005)
chr3 (153-267)||(10192413-10192525)
chr3 (58-136)||(13893269-13893347)
chr3 (62-116)||(38889935-38889989)
chr3 (159-275)||(5523041-5523156)
chr3 (51-166)||(24979552-24979668)
chr3 (159-270)||(10956453-10956562)
chr3 (153-267)||(10085493-10085605)
chr3 (51-116)||(6063744-6063809)
chr3 (51-118)||(12268262-12268329)
chr3 (55-116)||(5886181-5886242)
chr3 (204-270)||(1321162-1321228)
chr3 (50-116)||(50493895-50493961)
chr3 (153-238)||(5899492-5899576)
chr3 (55-116)||(5899656-5899717)
chr3 (51-116)||(53896492-53896557)
chr3 (60-116)||(25388794-25388850)
chr3 (153-270)||(5885984-5886101)
chr3 (51-101)||(6719407-6719457)
chr3 (204-270)||(24177000-24177066)
chr3 (153-214)||(25388654-25388714)
chr3 (60-117)||(46966940-46966997)
chr3 (60-115)||(38210265-38210320)
chr3 (223-270)||(25388619-25388666)
chr3 (814-846)||(47335187-47335219)
chr3 (954-994)||(53161628-53161668)
chr3 (62-136)||(562069-562144)
chr3 (51-89)||(4308577-4308615)
chr3 (816-846)||(6097570-6097600)
chr3 (816-846)||(9106417-9106447)
chr3 (816-846)||(10986502-10986532)
chr3 (917-951)||(23217930-23217964)
chr3 (51-89)||(25690652-25690690)
chr3 (816-846)||(26662424-26662454)
chr3 (60-114)||(26762863-26762917)
chr3 (816-846)||(30947797-30947827)
chr3 (816-846)||(46237644-46237674)
chr3 (51-89)||(51727302-51727340)
chr3 (60-89)||(455826-455855)
chr3 (60-89)||(458203-458232)
chr3 (60-89)||(746674-746703)
chr3 (817-846)||(3475294-3475323)
chr3 (60-89)||(4104204-4104233)
chr3 (817-846)||(9595867-9595896)
chr3 (60-89)||(10621847-10621876)
chr3 (817-846)||(19284821-19284850)
chr3 (60-89)||(25533357-25533386)
chr3 (94-139)||(27762318-27762363)
chr3 (58-87)||(31021450-31021479)
chr3 (817-846)||(34562394-34562423)
chr3 (60-89)||(42990205-42990234)
chr3 (60-89)||(53597164-53597193)
chr3 (817-846)||(54379312-54379341)
[»] chr4 (79 HSPs)
chr4 (43-270)||(7941134-7941362)
chr4 (51-270)||(11434770-11434990)
chr4 (51-238)||(22801160-22801346)
chr4 (51-270)||(5637767-5638005)
chr4 (51-270)||(36919885-36920124)
chr4 (60-270)||(3824880-3825111)
chr4 (51-270)||(48486114-48486354)
chr4 (51-269)||(51015042-51015281)
chr4 (51-270)||(9148055-9148286)
chr4 (51-167)||(22803032-22803148)
chr4 (60-167)||(37089681-37089789)
chr4 (51-167)||(5198338-5198455)
chr4 (61-165)||(24880371-24880476)
chr4 (51-270)||(36921793-36922032)
chr4 (51-167)||(38409117-38409234)
chr4 (60-270)||(11006548-11006780)
chr4 (51-270)||(9174444-9174683)
chr4 (51-270)||(22044688-22044929)
chr4 (153-270)||(16932243-16932359)
chr4 (61-165)||(24878909-24879014)
chr4 (51-167)||(24888714-24888831)
chr4 (51-270)||(31849897-31850137)
chr4 (153-270)||(9176918-9177034)
chr4 (153-270)||(16934597-16934713)
chr4 (60-165)||(47274647-47274753)
chr4 (51-167)||(22046983-22047099)
chr4 (51-165)||(619745-619860)
chr4 (60-165)||(8756557-8756663)
chr4 (153-270)||(22780835-22780951)
chr4 (153-270)||(22783200-22783316)
chr4 (51-157)||(40091713-40091820)
chr4 (62-165)||(52942756-52942860)
chr4 (160-269)||(22803162-22803270)
chr4 (173-266)||(52942910-52943002)
chr4 (159-267)||(24888594-24888701)
chr4 (159-267)||(37089802-37089910)
chr4 (159-270)||(38408994-38409104)
chr4 (51-116)||(16934441-16934506)
chr4 (51-116)||(18847123-18847188)
chr4 (153-269)||(40091837-40091952)
chr4 (187-270)||(22048492-22048574)
chr4 (161-270)||(18846924-18847034)
chr4 (51-116)||(9176772-9176837)
chr4 (51-116)||(16932087-16932152)
chr4 (60-116)||(11008877-11008933)
chr4 (60-139)||(4569899-4569978)
chr4 (93-167)||(18847049-18847124)
chr4 (52-138)||(25357583-25357671)
chr4 (93-167)||(11008932-11009007)
chr4 (60-134)||(16638636-16638710)
chr4 (51-89)||(17662536-17662574)
chr4 (51-89)||(44600136-44600174)
chr4 (60-114)||(52043737-52043791)
chr4 (153-214)||(11009014-11009075)
chr4 (59-116)||(22780687-22780744)
chr4 (59-116)||(22783052-22783109)
chr4 (878-918)||(9813017-9813057)
chr4 (954-994)||(51033265-51033305)
chr4 (875-918)||(51076966-51077009)
chr4 (875-918)||(53526384-53526427)
chr4 (51-89)||(2485171-2485209)
chr4 (51-89)||(6764836-6764874)
chr4 (51-89)||(8631721-8631759)
chr4 (816-846)||(11786124-11786154)
chr4 (816-846)||(11798291-11798321)
chr4 (59-89)||(22134936-22134966)
chr4 (59-89)||(24348211-24348241)
chr4 (816-846)||(30358857-30358887)
chr4 (51-89)||(40637071-40637109)
chr4 (60-114)||(40999254-40999308)
chr4 (51-89)||(47868398-47868436)
chr4 (816-846)||(49425943-49425973)
chr4 (917-946)||(581742-581771)
chr4 (60-89)||(14787740-14787769)
chr4 (817-846)||(15051023-15051052)
chr4 (60-89)||(22132706-22132735)
chr4 (60-89)||(47211053-47211082)
chr4 (60-89)||(53405124-53405153)
chr4 (817-846)||(53441470-53441499)
[»] chr1 (65 HSPs)
chr1 (51-270)||(6822776-6822996)
chr1 (51-270)||(13761578-13761818)
chr1 (51-270)||(51752105-51752346)
chr1 (51-270)||(51749779-51750020)
chr1 (51-269)||(38925778-38925996)
chr1 (76-270)||(49687302-49687496)
chr1 (51-270)||(47451406-47451629)
chr1 (51-238)||(6823656-6823865)
chr1 (51-270)||(20302199-20302440)
chr1 (49-270)||(10400126-10400368)
chr1 (60-165)||(28207375-28207481)
chr1 (51-270)||(15823287-15823527)
chr1 (51-270)||(28840419-28840659)
chr1 (51-165)||(41646786-41646901)
chr1 (60-165)||(3579927-3580033)
chr1 (60-165)||(13214947-13215053)
chr1 (58-235)||(14098277-14098453)
chr1 (93-238)||(16231374-16231518)
chr1 (153-270)||(47179429-47179545)
chr1 (153-267)||(16225891-16226004)
chr1 (153-270)||(47177079-47177194)
chr1 (51-167)||(28842357-28842474)
chr1 (51-164)||(39462385-39462500)
chr1 (60-164)||(30790703-30790808)
chr1 (165-270)||(20291281-20291386)
chr1 (153-270)||(23783239-23783355)
chr1 (153-270)||(28842234-28842350)
chr1 (51-116)||(16231517-16231582)
chr1 (202-270)||(14098441-14098509)
chr1 (171-258)||(13214834-13214920)
chr1 (51-114)||(16226085-16226148)
chr1 (179-270)||(39462259-39462349)
chr1 (51-114)||(47177276-47177339)
chr1 (51-114)||(47179627-47179690)
chr1 (161-266)||(3580050-3580154)
chr1 (51-116)||(23783467-23783532)
chr1 (53-99)||(20291390-20291436)
chr1 (1-39)||(23785919-23785957)
chr1 (51-89)||(24325599-24325637)
chr1 (225-266)||(28207540-28207581)
chr1 (225-270)||(41646682-41646727)
chr1 (58-114)||(27916415-27916471)
chr1 (60-136)||(49958940-49959016)
chr1 (51-86)||(15295148-15295183)
chr1 (816-846)||(16976105-16976135)
chr1 (816-846)||(19897646-19897676)
chr1 (60-114)||(26613549-26613603)
chr1 (816-846)||(31084422-31084452)
chr1 (816-846)||(48762217-48762247)
chr1 (60-89)||(2510637-2510666)
chr1 (51-88)||(2617460-2617497)
chr1 (817-846)||(6314266-6314295)
chr1 (60-89)||(9459732-9459761)
chr1 (60-89)||(9463559-9463588)
chr1 (60-89)||(12302819-12302848)
chr1 (877-918)||(14229243-14229284)
chr1 (60-89)||(18800878-18800907)
chr1 (817-846)||(21255835-21255864)
chr1 (817-846)||(23817460-23817489)
chr1 (817-846)||(24636076-24636105)
chr1 (60-89)||(31735834-31735863)
chr1 (60-89)||(43104102-43104131)
chr1 (817-846)||(43452692-43452721)
chr1 (60-89)||(46432037-46432066)
chr1 (60-89)||(47906207-47906236)
[»] chr5 (72 HSPs)
chr5 (51-270)||(25921771-25921991)
chr5 (45-270)||(39797850-39798075)
chr5 (51-270)||(2174681-2174900)
chr5 (51-270)||(38881846-38882086)
chr5 (60-270)||(31466285-31466495)
chr5 (51-270)||(12556221-12556440)
chr5 (97-270)||(34479799-34479971)
chr5 (51-267)||(4236374-4236610)
chr5 (60-279)||(36402635-36402853)
chr5 (51-270)||(2818634-2818846)
chr5 (134-270)||(659714-659848)
chr5 (1-116)||(10757180-10757295)
chr5 (60-269)||(6756257-6756466)
chr5 (1-115)||(10749704-10749818)
chr5 (153-270)||(34477515-34477631)
chr5 (153-270)||(31544799-31544915)
chr5 (60-167)||(21684768-21684876)
chr5 (153-270)||(31542443-31542559)
chr5 (60-147)||(21947911-21947999)
chr5 (1-116)||(38960292-38960405)
chr5 (51-167)||(16776021-16776139)
chr5 (142-270)||(38960476-38960603)
chr5 (153-270)||(10749506-10749622)
chr5 (51-163)||(20507760-20507873)
chr5 (1-116)||(15354735-15354845)
chr5 (1-116)||(15357011-15357121)
chr5 (179-270)||(20504361-20504451)
chr5 (171-270)||(21947771-21947869)
chr5 (153-270)||(10756961-10757077)
chr5 (153-270)||(15354948-15355064)
chr5 (153-270)||(15357224-15357340)
chr5 (1-116)||(23665054-23665162)
chr5 (1-116)||(23793425-23793533)
chr5 (172-270)||(18186489-18186586)
chr5 (51-116)||(31542651-31542716)
chr5 (51-116)||(31544996-31545061)
chr5 (1-89)||(3373298-3373377)
chr5 (207-270)||(21684905-21684968)
chr5 (171-270)||(20507902-20508000)
chr5 (153-270)||(23664835-23664951)
chr5 (153-270)||(23667110-23667226)
chr5 (153-270)||(23793636-23793752)
chr5 (60-116)||(34477379-34477435)
chr5 (212-270)||(661227-661285)
chr5 (4-116)||(23667329-23667434)
chr5 (60-113)||(29748260-29748313)
chr5 (51-116)||(31179669-31179734)
chr5 (60-116)||(34479740-34479796)
chr5 (1-89)||(23742019-23742101)
chr5 (204-270)||(16775898-16775964)
chr5 (153-214)||(31179837-31179897)
chr5 (223-270)||(31179885-31179932)
chr5 (154-216)||(659869-659929)
chr5 (60-114)||(2144899-2144954)
chr5 (51-89)||(4410000-4410038)
chr5 (51-89)||(10529397-10529435)
chr5 (812-846)||(14394618-14394652)
chr5 (51-89)||(39854427-39854465)
chr5 (817-846)||(3883922-3883951)
chr5 (60-89)||(10586782-10586811)
chr5 (817-846)||(13553133-13553162)
chr5 (817-846)||(14940243-14940272)
chr5 (60-89)||(15552178-15552207)
chr5 (60-89)||(18468950-18468979)
chr5 (917-954)||(19832214-19832251)
chr5 (813-846)||(23948601-23948634)
chr5 (60-89)||(25803959-25803988)
chr5 (817-846)||(26637724-26637753)
chr5 (60-89)||(27910388-27910417)
chr5 (60-89)||(27912473-27912502)
chr5 (93-157)||(31544932-31544997)
chr5 (817-846)||(37456830-37456859)
[»] chr2 (37 HSPs)
chr2 (49-270)||(43623864-43624084)
chr2 (60-266)||(6264452-6264658)
chr2 (51-270)||(40032356-40032585)
chr2 (51-270)||(24162510-24162751)
chr2 (51-270)||(19502309-19502549)
chr2 (60-275)||(18800609-18800823)
chr2 (60-270)||(21521002-21521233)
chr2 (51-267)||(27104519-27104756)
chr2 (51-270)||(19504643-19504883)
chr2 (62-268)||(6259124-6259351)
chr2 (51-164)||(13910342-13910456)
chr2 (51-167)||(42064355-42064472)
chr2 (50-165)||(22407706-22407822)
chr2 (1-100)||(45332342-45332439)
chr2 (1-116)||(36559025-36559138)
chr2 (1-116)||(36561302-36561415)
chr2 (51-165)||(22287634-22287749)
chr2 (153-270)||(36559241-36559357)
chr2 (153-270)||(36561560-36561676)
chr2 (161-270)||(45332566-45332674)
chr2 (159-270)||(42064232-42064342)
chr2 (60-155)||(35107152-35107248)
chr2 (60-133)||(28462593-28462666)
chr2 (58-113)||(45156946-45157001)
chr2 (60-114)||(35028473-35028527)
chr2 (60-165)||(37171051-37171156)
chr2 (52-87)||(20146906-20146941)
chr2 (52-87)||(20147047-20147082)
chr2 (875-918)||(31711631-31711674)
chr2 (816-846)||(1292065-1292095)
chr2 (817-846)||(7487141-7487170)
chr2 (60-89)||(17897549-17897578)
chr2 (60-89)||(23452548-23452577)
chr2 (917-954)||(23463756-23463793)
chr2 (60-89)||(35215903-35215932)
chr2 (817-846)||(39355185-39355214)
chr2 (817-846)||(41345082-41345111)
[»] chr8 (40 HSPs)
chr8 (51-270)||(4423836-4424055)
chr8 (51-238)||(3886216-3886407)
chr8 (51-270)||(27826783-27827023)
chr8 (51-270)||(27829094-27829334)
chr8 (60-270)||(15072507-15072738)
chr8 (59-270)||(15067778-15068010)
chr8 (51-167)||(14807672-14807788)
chr8 (51-167)||(28251865-28251981)
chr8 (153-270)||(18812669-18812785)
chr8 (51-165)||(2468396-2468511)
chr8 (51-270)||(12517324-12517564)
chr8 (153-270)||(18810484-18810600)
chr8 (161-270)||(43079348-43079456)
chr8 (153-270)||(43081723-43081839)
chr8 (153-267)||(28252009-28252122)
chr8 (159-267)||(14807552-14807659)
chr8 (51-116)||(18810680-18810745)
chr8 (51-116)||(18812865-18812930)
chr8 (153-270)||(44720618-44720735)
chr8 (51-116)||(44720815-44720880)
chr8 (60-115)||(17847501-17847556)
chr8 (93-167)||(44720742-44720816)
chr8 (51-89)||(43530123-43530161)
chr8 (60-124)||(31035032-31035095)
chr8 (60-116)||(43079558-43079614)
chr8 (60-116)||(43081930-43081986)
chr8 (60-114)||(31162186-31162241)
chr8 (816-846)||(10237504-10237534)
chr8 (816-846)||(15227180-15227210)
chr8 (51-89)||(22684964-22685002)
chr8 (877-918)||(186013-186054)
chr8 (817-846)||(1149910-1149939)
chr8 (60-89)||(6375988-6376017)
chr8 (60-89)||(15809214-15809243)
chr8 (60-89)||(24873494-24873523)
chr8 (60-89)||(28283532-28283561)
chr8 (63-111)||(31574054-31574100)
chr8 (60-89)||(32339304-32339333)
chr8 (817-846)||(34633208-34633237)
chr8 (817-846)||(35301624-35301653)
[»] scaffold0025 (3 HSPs)
scaffold0025 (51-267)||(73325-73540)
scaffold0025 (51-167)||(69593-69709)
scaffold0025 (163-267)||(69726-69829)
[»] chr6 (49 HSPs)
chr6 (823-994)||(7367781-7367961)
chr6 (51-270)||(1072175-1072394)
chr6 (50-270)||(8995256-8995496)
chr6 (50-270)||(9019703-9019943)
chr6 (51-270)||(32279795-32280013)
chr6 (51-270)||(19227706-19227947)
chr6 (51-270)||(14507473-14507715)
chr6 (51-167)||(11983327-11983444)
chr6 (60-165)||(30729135-30729241)
chr6 (49-167)||(15530418-15530537)
chr6 (153-270)||(33308686-33308802)
chr6 (153-270)||(33310955-33311071)
chr6 (60-165)||(15541447-15541553)
chr6 (153-270)||(26068765-26068881)
chr6 (1-116)||(26068556-26068662)
chr6 (153-270)||(26066494-26066610)
chr6 (153-270)||(29755162-29755278)
chr6 (1-114)||(26066285-26066389)
chr6 (60-156)||(15532988-15533085)
chr6 (1-47)||(29754870-29754916)
chr6 (159-267)||(11983457-11983562)
chr6 (207-270)||(15530597-15530660)
chr6 (51-116)||(29754994-29755059)
chr6 (60-116)||(4816552-4816608)
chr6 (60-116)||(20915665-20915721)
chr6 (93-164)||(24192635-24192707)
chr6 (51-89)||(12195813-12195851)
chr6 (55-116)||(33308905-33308966)
chr6 (55-116)||(33311174-33311235)
chr6 (93-164)||(24191538-24191610)
chr6 (223-270)||(15541631-15541678)
chr6 (223-270)||(24191620-24191667)
chr6 (223-270)||(24192717-24192764)
chr6 (52-89)||(3028149-3028186)
chr6 (153-214)||(4816689-4816749)
chr6 (60-114)||(12186376-12186431)
chr6 (61-124)||(16455732-16455795)
chr6 (51-89)||(1230547-1230585)
chr6 (816-846)||(7089232-7089262)
chr6 (51-89)||(28241619-28241657)
chr6 (60-89)||(2629197-2629226)
chr6 (817-846)||(6900953-6900982)
chr6 (817-846)||(7765424-7765453)
chr6 (817-846)||(15493324-15493353)
chr6 (817-846)||(18755658-18755687)
chr6 (917-954)||(21686122-21686159)
chr6 (917-946)||(23158117-23158146)
chr6 (60-89)||(30034914-30034943)
chr6 (817-846)||(34869950-34869979)
[»] scaffold0250 (2 HSPs)
scaffold0250 (51-167)||(2753-2870)
scaffold0250 (159-270)||(2630-2740)
[»] scaffold0131 (2 HSPs)
scaffold0131 (51-157)||(14902-15009)
scaffold0131 (169-271)||(14767-14869)
[»] scaffold0068 (2 HSPs)
scaffold0068 (60-167)||(29034-29142)
scaffold0068 (207-270)||(28942-29005)
[»] scaffold0339 (1 HSPs)
scaffold0339 (60-165)||(3872-3978)
[»] scaffold0472 (2 HSPs)
scaffold0472 (153-270)||(5928-6044)
scaffold0472 (51-116)||(6124-6189)
[»] scaffold0127 (1 HSPs)
scaffold0127 (153-270)||(12937-13053)
[»] scaffold0140 (4 HSPs)
scaffold0140 (1-116)||(22135-22243)
scaffold0140 (1-116)||(24410-24518)
scaffold0140 (153-270)||(21916-22032)
scaffold0140 (153-270)||(24191-24307)
[»] scaffold0571 (1 HSPs)
scaffold0571 (816-846)||(539-569)
[»] scaffold0552 (1 HSPs)
scaffold0552 (51-89)||(1129-1167)
[»] scaffold0038 (1 HSPs)
scaffold0038 (51-89)||(41781-41819)
[»] scaffold0164 (1 HSPs)
scaffold0164 (917-954)||(33879-33916)
[»] scaffold0074 (1 HSPs)
scaffold0074 (817-846)||(24424-24453)
[»] scaffold0005 (1 HSPs)
scaffold0005 (60-89)||(51961-51990)


Alignment Details
Target: chr7 (Bit Score: 499; Significance: 0; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 272 - 815
Target Start/End: Complemental strand, 31964480 - 31963942
Alignment:
Q  272 ataagaaactctacatgacaatttacaagaaccaaaattaaatccttttcataataaaaactacctgaccaagatcatcttctccaacagaaccaaaagg 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31964480 ataagaaactctacatgacaatttacaagaaccaaaattaaatccttt-cataataaaaactacctgaccaagatcatcttctccaacagaaccaaaagg 31964382  T
Q  372 tacgattttggctccaaatctggcagccatcctgacaaactcagattgttcaggccagaataatttgtattcttcaccctgataattatcacacaatgat 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31964381 tacgattttggctccaaatctggcagccatcctgacaaactcagattgttcaggccagaataatttgtattcttcaccctgataattatcacacaatgat 31964282  T
Q  472 gaagaatttatacaaacctagtacattttaaagcataaatatgaagacggagacaacacctcataaaaataagcgccggaatcccaacattaaatgcgat 571  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31964281 gaagaatttatacaaacctagtacattttaaatcataaatatgaagacagagacaacacctcataaaaataagcgccggaatcccaacattaaatgcgat 31964182  T
Q  572 aattaaaataaaaaagctttcaaaaatcctaaccagctgtatgattttagtttcgaatgtccaataacaagtcaaagactttataaggaatcaaacaaaa 671  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    |||||    
T  31964181 aattaaaataaaaaagctttcaaaaatcctaaccagctgtatgattttagtttcgaatgtccaagaacaagtcaaagactttataaggaat----caaaa 31964086  T
Q  672 gagcagatcaggattgaatgagaaagataaatttcataatgaagagcctacttataggacttaccttcctatgaaaagcctcgcgtatccctccaggaaa 771  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  31964085 gagcagatcaggattgaatgagaaagataaatttcataatgaagagcctacttataggacttaccttcctatgaaaagcctcgcgtgtccctcaaggaaa 31963986  T
Q  772 taatagcacatgtgatttggaagataaaagcttgaataggttag 815  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31963985 taatagcacatgtgatttggaagataaaagcttgaataggttag 31963942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 8e-76
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 1049593 - 1049812
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  1049593 agtttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagc 1049692  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    ||||| || |||||||||||||||||| |||||| || ||||||||||||  | |||||||||||||||||||| |||||||||||||| ||||  | |     
T  1049693 gcaccttcgtgccacgatttttccagtaccttgcttc-aaaactgaaacctccaatcgtgccacgttgcccagcaatcgtgccacgattcctgcagatct 1049791  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  1049792 tgattttaagttaactctcac 1049812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 64 - 270
Target Start/End: Complemental strand, 26804551 - 26804346
Alignment:
Q  64 acaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcgcaccatcatgcca 163  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||    
T  26804551 acaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttatttgctgccagcgcaccatcgtgcca 26804452  T
Q  164 cgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctg-cgaaacctgattttaagtta 262  Q
    ||||||||||| ||||||||||| ||||||||||||  | ||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  26804451 cgatttttccactgccttgcctc-aaaactgaaacctccaatcgtaccacgttgcccagccatcgtgccacga-ttctgtagaaacctgattttaagtta 26804354  T
Q  263 actctcac 270  Q
    ||||||||    
T  26804353 actctcac 26804346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 340 - 578
Target Start/End: Complemental strand, 31950150 - 31949909
Alignment:
Q  340 ccaagatcatcttctccaacagaaccaaaaggtacgattttggctccaaatctggcagccatcctgacaaactcagattgttcaggccagaataatttgt 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31950150 ccaagatcatcttctccaacagaaccaaaaggtacgattttggctccaaatctggcagccatcctgacaaactcagattgttcaggccagaataacttgt 31950051  T
Q  440 attcttcaccctgataattatcacacaatgatgaagaatttatacaaacctagtacattttaaagcataaatatgaagacggagaca----acacctcat 535  Q
    | ||||||||||||| |||||||||||||||||||||||| | |||| | ||||| | |||||| ||||||||| ||||| || |||     || |  |     
T  31950050 actcttcaccctgatgattatcacacaatgatgaagaattcaaacaatcttagta-aatttaaatcataaatataaagacagatacatagtgcatccgaa 31949952  T
Q  536 aaaaataagcgccggaatcccaacattaaatgcgataattaaa 578  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||    
T  31949951 aaaaataagcgctggaattccaacattgaatgtgataattaaa 31949909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 53 - 270
Target Start/End: Original strand, 40837042 - 40837260
Alignment:
Q  53 tttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc--aaaatacgtttctgttattcgccgccagcg 150  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| |||||| || ||||| ||||||     
T  40837042 tttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaaatatgtttctatttttcgctgccagca 40837141  T
Q  151 caccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacc 249  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||  |||||||||||||| |||||| ||||||    
T  40837142 caccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaa-cctccatcgtgccacgttgtccgaccatcgtgccacga-ttctgcagaaacc 40837239  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  40837240 tgattttaagttaactctcac 40837260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 340 - 460
Target Start/End: Complemental strand, 31976200 - 31976080
Alignment:
Q  340 ccaagatcatcttctccaacagaaccaaaaggtacgattttggctccaaatctggcagccatcctgacaaactcagattgttcaggccagaataatttgt 439  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||||||||    
T  31976200 ccaagatcatcttctccaacagcaccaaaaggtacgattttggctccaaatcttgctgccattctgataaactcagattgttcaggccagaataatttgt 31976101  T
Q  440 attcttcaccctgataattat 460  Q
    |||||||||||||| ||||||    
T  31976100 attcttcaccctgaaaattat 31976080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 27306527 - 27306766
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||    
T  27306527 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgctagc 27306626  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| |||||||||||||||| || |||||||| ||||||||||||  | |||||||||||||| ||||||||||    
T  27306627 gcaccatcgtgccacgaagcgaccccatcgtgccacgatttttccaatgacttgcctc-aaaactgaaacctccaatcgtgccacgttgtccagccatcg 27306725  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||| ||| |||||| |||||||||||||||||||    
T  27306726 tgccacgattt-tgcaaaaccttattttaagttaactctcac 27306766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 3878566 - 3878323
Alignment:
Q  51 agtttgctttgatacaaggtctatatt----tatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgcc 146  Q
    |||||||| ||||||||||||||||||    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  3878566 agtttgctctgatacaaggtctatattaatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgctgcc 3878467  T
Q  147 agcg---------------------caccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagcca 225  Q
    ||||                     | ||||| |||||||||||||||||||| ||||||| |||  |||||||  | ||||||||||||||||||||||    
T  3878466 agcgtaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagcca 3878368  T
Q  226 tcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||    
T  3878367 tcgtgccacga-ttctgcagaaatctgattttaagttaactctcac 3878323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 51 - 275
Target Start/End: Complemental strand, 35620 - 35375
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| || ||||||    
T  35620 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgctatttgctgccagc 35521  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| |||||||||||||||||||| ||||||| |||  |||||||  | |||||||||||||||| ||| ||||    
T  35520 gcacgatcgggccacgatgcgaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcctagcaatcg 35422  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcacgataa 275  Q
    |||||||||| ||||  | | ||||||||||||||||||||| ||||    
T  35421 tgccacgattcctgcagatcttgattttaagttaactctcacaataa 35375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 44555 - 44438
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| |||| ||||||| || ||||||    
T  44555 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggtacaaatctgcacccaaaaatatgtttatgttatttgctgccagc 44456  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  44455 gcaccatcgtgccacgat 44438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 25542522 - 25542404
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc--aaaatacgtttctgttattcgccgccag 148  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |  |||||| ||||||||| ||||| |||||    
T  25542522 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaataaatctacactcaaaaaatatgtttctgtttttcgctgccag 25542423  T
Q  149 cgcaccatcatgccacgat 167  Q
    ||||||||| |||||||||    
T  25542422 cgcaccatcgtgccacgat 25542404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 1047386 - 1047502
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  1047386 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 1047483  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  1047484 attttaagttaactctcac 1047502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9027354 - 9027467
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||  | |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  9027354 gactccaatcctaatagtgtttctctctatctctctctctactctc--caagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 9027451  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  9027452 tctataacaaatctgc 9027467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2935396 - 2935279
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactct--cttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaa 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  ||   |||||||||||||||||||||||||||||||||||||||   ||||||    
T  2935396 gactccaatcctaatagtgtttctctctatctcaatctccactctcactcagagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaa 2935297  T
Q  99 aatttggaacaaatctgc 116  Q
    ||| |  |||||||||||    
T  2935296 aatctataacaaatctgc 2935279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 51 - 163
Target Start/End: Complemental strand, 18567604 - 18567491
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc--caaaatacgtttctgttattcgccgccag 148  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||   |||||||||||||||||||||  |||||    
T  18567604 agtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaac-aatttgcaccaaaaaaatacgtttctgttattcgttgccag 18567506  T
Q  149 cgcaccatcatgcca 163  Q
    ||||||||| |||||    
T  18567505 cgcaccatcgtgcca 18567491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 22392464 - 22392357
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||   ||||||| |||||||| || ||| |||||    
T  22392464 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttacaatttggaacaaatctgcactgaaaaatacatttctgttttttgcctccagc 22392365  T
Q  150 gcaccatc 157  Q
    ||||||||    
T  22392364 gcaccatc 22392357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 31435345 - 31435458
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc--caaaatacgtttctgttattcgccgccag 148  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||   |||||||||||||||||||||  |||||    
T  31435345 agtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaac-aatttgcaccaaaaaaatacgtttctgttattcgttgccag 31435443  T
Q  149 cgcaccatcatgcca 163  Q
    ||||||||| |||||    
T  31435444 cgcaccatcgtgcca 31435458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1606508 - 1606423
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||||| |||||||   |||   |||||||||||||||||||||||||||||||||||||||    
T  1606508 gactccaatcctaatagtgtttctctctatctctatctcta---tctcaaagtttgctttgatacaaggtctatatttatagtaaaagt 1606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 2935187 - 2935071
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||| ||||||||||| || ||| ||||||||    
T  2935187 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagccgtcgtgccacga-ttgtgcagaaacctg 2935090  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  2935089 attttaagttaactctcac 2935071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 9027570 - 9027686
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||| ||||||||||| || ||| ||||||||    
T  9027570 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagccgtcgtgccacga-ttgtgcagaaacctg 9027667  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  9027668 attttaagttaactctcac 9027686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 705 - 815
Target Start/End: Complemental strand, 31975447 - 31975336
Alignment:
Q  705 tcataatgaagagcctacttataggactt-accttcctatgaaaagcctcgcgtatccctccaggaaataatagcacatgtgatttggaagataaaagct 803  Q
    ||||||| |||||| ||||||| ||| || ||||||||||||| ||||||||| |||||||||||| |||| || |||||||| ||||||||||||||||    
T  31975447 tcataataaagagcatacttattggaatttaccttcctatgaagagcctcgcgcatccctccaggatataacaggacatgtgacttggaagataaaagct 31975348  T
Q  804 tgaataggttag 815  Q
    | || |||||||    
T  31975347 taaagaggttag 31975336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 22136995 - 22136879
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  22136995 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 22136898  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  22136897 attttaagttaactctcac 22136879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 40552022 - 40551906
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  40552022 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 40551925  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  40551924 attttaagttaactctcac 40551906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22108195 - 22108087
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  22108195 gactccaatcctaatagtgtttctctctatctcaatctctcaa-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 22108103  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  22108102 tctataacaaatctgc 22108087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22137206 - 22137098
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  22137206 gactccaatcctaatagtgtttctctctatctcaatctctcaa-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 22137114  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  22137113 tctataacaaatctgc 22137098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40549955 - 40549847
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  40549955 gactccaatcctaatagtgtttctctctatctcaatctctcaa-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 40549863  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  40549862 tctataacaaatctgc 40549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 40552233 - 40552125
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  40552233 gactccaatcctaatagtgtttctctctatctcaatctctcaa-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 40552141  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  40552140 tctataacaaatctgc 40552125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 18567462 - 18567364
Alignment:
Q  171 tccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||| |||||||||||| ||||||||  | |||||||||| ||||||||| ||||||||||||||||||   ||||||||||||||| |||||||||    
T  18567462 tccagtgacttgcctcaaaa-ctgaaacctccaatcgtgccactttgcccagctatcgtgccacgatttctgtagaacctgattttaagtcaactctcac 18567364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 25542391 - 25542282
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    |||||||||||||| |||||||||||| |||| ||||||||  | |||||||||||||||||||| |||||||||| ||| ||||  | | |||||||||    
T  25542391 tgccacgatttttcaagtgccttgccttaaaa-ctgaaacctccaatcgtgccacgttgcccagcaatcgtgccac-attcctgcagatcttgattttaa 25542294  T
Q  259 gttaactctcac 270  Q
    ||||||||||||    
T  25542293 gttaactctcac 25542282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 31435487 - 31435585
Alignment:
Q  171 tccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||| |||||||||||| ||||||||  | |||||||||| ||||||||| ||||||||||||||||||   ||||||||||||||| |||||||||    
T  31435487 tccagtgacttgcctcaaaa-ctgaaacctccaatcgtgccactttgcccagctatcgtgccacgatttctgtagaacctgattttaagtcaactctcac 31435585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 22107984 - 22107868
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  22107984 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctgcatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 22107887  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  22107886 attttaagttaactctcac 22107868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 40549744 - 40549628
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||| ||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  40549744 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctgcatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 40549647  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  40549646 attttaagttaactctcac 40549628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 45366526 - 45366446
Alignment:
Q  62 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcg 141  Q
    ||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||   |||||||||||||||| ||||    
T  45366526 atacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcactgaaaaatacgtttctgtttttcg 45366446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 732 - 815
Target Start/End: Complemental strand, 31949024 - 31948941
Alignment:
Q  732 ttaccttcctatgaaaagcctcgcgtatccctccaggaaataatagcacatgtgatttggaagataaaagcttgaataggttag 815  Q
    ||||||||||||||||  |||||||||  ||||||||| ||||||| |||||||| ||||||| |||||| ||||| |||||||    
T  31949024 ttaccttcctatgaaatccctcgcgtaatcctccaggatataataggacatgtgacttggaagctaaaagattgaagaggttag 31948941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 917 - 994
Target Start/End: Original strand, 45623321 - 45623407
Alignment:
Q  917 atctatacctattaataaagacaatactttcttttgg---------ttttctttcctattttacctctagttaattgcaaatattcc 994  Q
    |||||||||||||||||||| ||||||||||||||||         ||||||||||||||||||| ||| |||||||||||||||||    
T  45623321 atctatacctattaataaaggcaatactttcttttggtgtagcctattttctttcctattttacccctaattaattgcaaatattcc 45623407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 139
Target Start/End: Complemental strand, 42006545 - 42006468
Alignment:
Q  62 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttatt 139  Q
    ||||| ||| ||||||||||||||||||  | |||||||| |||||||||||| |||  ||||||||||| |||||||    
T  42006545 atacacggtttatatttatagtaaaagtaacccttaaaatatggaacaaatcttcactgaaaatacgtttatgttatt 42006468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 44381 - 44315
Alignment:
Q  204 atcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||||||  |||||||||||||| ||||  | | |||||||||||||||||||||    
T  44381 atcgtgccacattgcccagaaatcgtgccacgattcctgcagatcttgattttaagttaactctcac 44315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 112
Target Start/End: Original strand, 31156209 - 31156271
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaat 112  Q
    ||||||| |||||||||| |||||||||||||||||||| | ||| | |||||||||||||||    
T  31156209 agtttgccttgatacaagctctatatttatagtaaaagtatagctcataaatttggaacaaat 31156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 1047238 - 1047295
Alignment:
Q  59 ttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  1047238 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 1047295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 22251840 - 22251893
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttg 104  Q
    ||||| || |||| |||||| |||||||||||||||||| ||||||||||||||    
T  22251840 agtttactctgattcaaggtttatatttatagtaaaagtgtcgcttaaaatttg 22251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 954 - 994
Target Start/End: Original strand, 26643086 - 26643126
Alignment:
Q  954 ttttctttcctattttacctctagttaattgcaaatattcc 994  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  26643086 ttttctttcctattttacccctaattaattgcaaatattcc 26643126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 811 - 846
Target Start/End: Complemental strand, 763882 - 763847
Alignment:
Q  811 gttagcgggagtggttatggtgcataaggaaatcct 846  Q
    |||| |||||||||||||||||||||||||||||||    
T  763882 gttaccgggagtggttatggtgcataaggaaatcct 763847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 7092477 - 7092512
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaa 86  Q
    |||||||| |||||||||||||||||||||||||||    
T  7092477 agtttgctctgatacaaggtctatatttatagtaaa 7092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 1849956 - 1849918
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  1849956 agtttgctatgaaacaaggtctatatttatagtaaaagt 1849918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 33798783 - 33798753
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  33798783 cgggagtggttatggtgcataaggaaatcct 33798753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 35737128 - 35737098
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  35737128 cgggagtggttatggtgcataaggaaatcct 35737098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 3035699 - 3035670
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  3035699 tgatacaaggtctatatttatagtaaaagt 3035670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 7349586 - 7349615
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  7349586 tgatacaaggtctatatttatagtaaaagt 7349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 917 - 954
Target Start/End: Complemental strand, 10209982 - 10209945
Alignment:
Q  917 atctatacctattaataaagacaatactttcttttggt 954  Q
    ||||||||||||||||| || |||||||||||||||||    
T  10209982 atctatacctattaatatagccaatactttcttttggt 10209945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 11757206 - 11757177
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  11757206 tgatacaaggtctatatttatagtaaaagt 11757177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 13099775 - 13099812
Alignment:
Q  52 gtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  13099775 gtttactttgattcaaggtctatatttatagtaaaagt 13099812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 18345519 - 18345490
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  18345519 tgatacaaggtctatatttatagtaaaagt 18345490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 20299436 - 20299407
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  20299436 tgatacaaggtctatatttatagtaaaagt 20299407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 28485544 - 28485515
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  28485544 tgatacaaggtctatatttatagtaaaagt 28485515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 30884109 - 30884138
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  30884109 gggagtggttatggtgcataaggaaatcct 30884138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 31660248 - 31660219
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  31660248 gggagtggttatggtgcataaggaaatcct 31660219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 38393964 - 38393935
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  38393964 tgatacaaggtctatatttatagtaaaagt 38393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 38396268 - 38396239
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  38396268 tgatacaaggtctatatttatagtaaaagt 38396239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 41910999 - 41911028
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  41910999 gggagtggttatggtgcataaggaaatcct 41911028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 270
Target Start/End: Complemental strand, 42006354 - 42006317
Alignment:
Q  233 acgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  42006354 acgatttctccaaaacctgattttaagttaactctcac 42006317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 43253831 - 43253860
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  43253831 tgatacaaggtctatatttatagtaaaagt 43253860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 46358699 - 46358670
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  46358699 gggagtggttatggtgcataaggaaatcct 46358670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 47340326 - 47340297
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  47340326 gggagtggttatggtgcataaggaaatcct 47340297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 48830648 - 48830619
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  48830648 gggagtggttatggtgcataaggaaatcct 48830619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 1e-87; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 11163111 - 11162892
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11163111 agtttgctctgatacaaggtctatatttatcgtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagc 11163012  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||  | |     
T  11163011 gcaccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaa-cctccatcgtgccacgttgcccagcaatcgtgccacgattcctgcagatct 11162913  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  11162912 tgattttaagttaactctcac 11162892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 11170365 - 11170146
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  11170365 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgccgccagc 11170266  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    |||| |||  ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||| ||||  | |     
T  11170265 gcacaatcgagccacgatttttccagtgccttgcctcaaaaaccgaaa-cctccatcgtgccacgttgcccagcaaccgtgccacgattcctgcagatct 11170167  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  11170166 tgattttaagttaactctcac 11170146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 18097197 - 18097421
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgcca-- 147  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||      
T  18097197 agtttactatgatacaaggtctatatttatagtaaaagtctcgcttaaaatttgaaacaaatctgcacccaaaaatacgtttctgttattcgccgccact 18097296  T
Q  148 --gcg-caccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc- 243  Q
      ||| | ||||| |||||||||||||||  ||||||||||| ||||||||||||  | |||||||||||||||||||||||||||||||||||| |||     
T  18097297 atgcgaccccatcgtgccacgatttttcctatgccttgcctc-aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattt-tgca 18097394  T
Q  244 gaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||||||||||||||    
T  18097395 gaaacctgattttaagttaactctcac 18097421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 22114601 - 22114841
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  22114601 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccatc 22114700  T
Q  150 gcaccatcatgccacg---------------------atttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||||||| |||||||                     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  22114701 gcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaactgaaa-cctccatcgtgccacgttgcccaaccatcg 22114799  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||| |||| | |||||||||||||||||||||||||||    
T  22114800 tgccacga-ttctacagaaacctgattttaagttaactctcac 22114841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 48361966 - 48362185
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgca-cccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||||||    
T  48361966 agtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatacgtttctgctattcgctgccagc 48362065  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    |||||||||||||||||    || |||  |||||||| |||||||||||   | |||||||||||||||||| ||||||||||||||||||| |  ||||    
T  48362066 gcaccatcatgccacgaaaaatctagttacttgcctc-aaaactgaaacttccaatcgtgccacgttgcccaaccatcgtgccacgatttctacagaacc 48362164  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  48362165 tgattttaagttaactctcac 48362185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 35777382 - 35777164
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||||| || ||||||||||||||| |||||| |||| |||| || || ||||||    
T  35777382 agtttgctttgatacaatgtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcacccaaaaatatgtttatgtt-tttgctgccagc 35777284  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaac 248  Q
    |||||||| ||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||  ||||||||||| |||||| ||||     
T  35777283 gcaccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccacgttgcccagctgtcgtgccacga-ttctgcagaaat 35777186  T
Q  249 ctgattttaagttaactctcac 270  Q
    || |||||||||||||||||||    
T  35777185 ctaattttaagttaactctcac 35777164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 93 - 270
Target Start/End: Complemental strand, 38889936 - 38889758
Alignment:
Q  93 gcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccacgatttttccagtgccttgcctcaaaaa 191  Q
    ||||||||| || ||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  38889936 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatttttccaatgccttgcctaaaaaa 38889837  T
Q  192 ctgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc--gaaacctgattttaagttaactctcac 270  Q
    |||||| |||||||||||||||||||||  |||||||| |||||| ||||||   |||||| |||||||||||||||||||    
T  38889836 ctgaaa-cctccatcgtgccacgttgccttgccatcgtaccacga-ttctgcagaaaacctaattttaagttaactctcac 38889758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 61 - 275
Target Start/End: Complemental strand, 32219046 - 32218832
Alignment:
Q  61 gatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatcat 159  Q
    ||||||||||||||||||||| | ||||| |  ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||| |    
T  32219046 gatacaaggtctatatttatactgaaagtattacttaaaatttggaacaaatctgcacccaaaaatacgtttctcttattcgctgccagcgcaccatcgt 32218947  T
Q  160 gccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaag 259  Q
    ||||||     ||||| | |||||||| |||  |||||||  | ||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||    
T  32218946 gccacggaaaatccagcgacttgcctc-aaagttgaaacctccaatcgtgccacgttgcccaatcatcgtgccacgatttctgcagaacctgattttaag 32218848  T
Q  260 ttaactctcacgataa 275  Q
    ||||||||||| ||||    
T  32218847 ttaactctcacaataa 32218832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 60 - 183
Target Start/End: Complemental strand, 18162616 - 18162492
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||     
T  18162616 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcaccatcg 18162517  T
Q  159 tgccacgatttttccagtgccttgc 183  Q
    || |||||||||||||||| |||||    
T  18162516 tggcacgatttttccagtgacttgc 18162492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 18099467 - 18099706
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||    
T  18099467 agtttactctgatacaaggtctatatt-atagtaaaagtctcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctattgttcgccgccagc 18099565  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| ||||||||||||||||||| |||||||| ||||||||||||  | |||||||||||||||||||||||||    
T  18099566 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgtcttgcctc-aaaactgaaacctccaatcgtgccacgttgcccagccatcg 18099664  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    
T  18099665 tgccacgattt-tgcagaaacctgattttaagttaactctcac 18099706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 60 - 270
Target Start/End: Original strand, 32264348 - 32264579
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcac----- 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||         
T  32264348 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcacccaaaaatatgtttctgttattcgctgccagcgcaccatcg 32264447  T
Q  154 ----------------catcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgat 237  Q
                    |||| ||||||||    ||||||| |||||||||||||||||||||  | ||||||||||||| ||||||||||||||||||||    
T  32264448 tgccacgttgcaagcccatcgtgccacgaaaaatccagtgacttgcctcaaaaactgaaacctccaatcgtgccacgtt-cccagccatcgtgccacgat 32264546  T
Q  238 ttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||| ||||||||||||||||||||||||||    
T  32264547 ttctgcaaaacctgattttaagttaactctcac 32264579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 3859489 - 3859372
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| | |||||||||||||||    
T  3859489 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcacccaaaaatacgtttatattattcgccgccagc 3859390  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  3859389 gcaccatcgtgccacgat 3859372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 5191614 - 5191374
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  5191614 agtttgcttagatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 5191515  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| |||||||||||||||||| ||||||||| ||||||||||||  | ||||||||||| |||||||| ||||    
T  5191514 gcaccatcgtgccacgatgagatcccatcgtgccacgatttttccagtaccttgcctc-aaaactgaaacctccaatcgtgccacgatgcccagcaatcg 5191416  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||| |||||| |||| ||||||||||||||||||||||    
T  5191415 tgccacga-ttctgcagaaatctgattttaagttaactctcac 5191374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 93 - 270
Target Start/End: Original strand, 6719471 - 6719650
Alignment:
Q  93 gcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccacgatttttccagtgccttgcctcaaaaa 191  Q
    ||||||||| || | ||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||    
T  6719471 gcttaaaatctgtatcaaatctgcacccaaaaatatgtttctgttattcgccgccagcgcaccatcgtgccacgatttttccagtgcattgcct-aaaaa 6719569  T
Q  192 ctgaaacc-ctcc-atcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||| |||| ||||||||||| |||||  | ||||||||||||||     |||||||||||||||||||| ||||||    
T  6719570 ctgaaacctctccaatcgtgccacgatgcccttcaatcgtgccacgattaagcagaaacctgattttaagttaattctcac 6719650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 5522911 - 5523028
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  5522911 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 5523010  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  5523011 gcaccatcgtgccacgat 5523028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 51 - 213
Target Start/End: Original strand, 6066093 - 6066254
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagc 149  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| || ||||||||||| ||||||| ||| ||| | || ||  ||||||||    
T  6066093 agtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaatctgtaacaaatctgctcccaaaaatacattt-tatttttatccgccagc 6066191  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccac 213  Q
    |||||||| ||||||||| ||||||||||||||||  ||||||| ||| |||||||||||||||    
T  6066192 gcaccatcgtgccacgatgtttccagtgccttgcccaaaaaact-aaaacctccatcgtgccac 6066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 38210184 - 38210068
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  38210184 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 38210087  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  38210086 attttaagttaactctcac 38210068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 50493793 - 50493677
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  50493793 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagctatcgtgccacga-ttctgcagaaacctg 50493696  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  50493695 attttaagttaactctcac 50493677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 1321402 - 1321285
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  1321402 agtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 1321303  T
Q  150 gcaccatcatgccacgat 167  Q
     ||||||| |||||||||    
T  1321302 acaccatcgtgccacgat 1321285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 10084689 - 10084806
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||||||  ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  10084689 agtttgctccgatacaaggtctatatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 10084788  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  10084789 gcaccatcgtgccacgat 10084806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 10191609 - 10191726
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| | |||||| ||||||||| ||||| ||||||    
T  10191609 agtttgctccgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaatatgtttctgtttttcgctgccagc 10191708  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  10191709 gcaccatcgtgccacgat 10191726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 53896637 - 53896753
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| |||||||||||||||||| |||||||  ||||||| ||||| ||||||||||||||||||||||| |||||||||||| |||||| ||||||||    
T  53896637 ccatcgtgccacgatttttccagtaccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagcaatcgtgccacga-ttctgcagaaacctg 53896734  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  53896735 attttaagttaactctcac 53896753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 26720509 - 26720392
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||   |||||| ||||||||| ||||| ||||||    
T  26720509 agtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactaaaaaatatgtttctgtttttcgctgccagc 26720410  T
Q  150 gcaccatcatgccacgat 167  Q
     ||||||| |||||||||    
T  26720409 acaccatcgtgccacgat 26720392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 10956332 - 10956440
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    ||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||     
T  10956332 tgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaaaatacgtttatgttattcgctgccagcgcaccatcg 10956431  T
Q  159 tgccacgat 167  Q
    |||||||||    
T  10956432 tgccacgat 10956440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 10958628 - 10958736
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    ||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||     
T  10958628 tgatacaaggtctatatttatagtaaaaaaattgcttaaaatttggaacaaatctgcacctaaaaatacgtttctgttattggctgccagcgcaccatcg 10958727  T
Q  159 tgccacgat 167  Q
    |||||||||    
T  10958728 tgccacgat 10958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 45882900 - 45882785
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||| ||||||||||||||  | ||||    
T  45882900 agtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaattttcaacaaatctgcacccaaaaataggtttctgttattcgttgtcagc 45882801  T
Q  150 gcaccatcatgccacg 165  Q
    |||||||| |||||||    
T  45882800 gcaccatcgtgccacg 45882785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 15780821 - 15780748
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa 124  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15780821 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaa 15780748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 24177231 - 24177126
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||   ||||||||||| |||| |||||| ||| |||||||||     
T  24177231 tgatacaaggtctatatttataataaaagtatcccttaaaatttggaacaaatctgcacttaaaaatacgtttatgtttttcgcctccaacgcaccatcg 24177132  T
Q  159 tgccac 164  Q
    ||||||    
T  24177131 tgccac 24177126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 7606880 - 7606962
Alignment:
Q  187 aaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  7606880 aaaaactgaaacc-tccatcgtgccacgttgcccagccatcgtgtcacga-ttctgcagaaacctgattttaagttaactctcac 7606962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 26720379 - 26720269
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    |||||||||||||||||||| ||||||||||   |||||||  | ||| ||||||||||| ||||||||||||||||||| ||||  | |||||||||||    
T  26720379 tgccacgatttttccagtgctttgcctcaaact-tgaaacctccaatcctgccacgttgctcagccatcgtgccacgattcctgcagatcctgattttaa 26720281  T
Q  259 gttaactctcac 270  Q
    ||||||||||||    
T  26720280 gttaactctcac 26720269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 6063889 - 6064005
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||| ||||||||||||  ||||||| ||||| ||||| |||||||||||||  ||||||||||||||| ||||||  |||||||    
T  6063889 ccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacc-tccattgtgccacgttgccttgccatcgtgccacga-ttctgcataaacctg 6063986  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||| ||||||    
T  6063987 attttaagttaattctcac 6064005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 10192413 - 10192525
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctga 252  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  || |||||||||||||| |    ||| ||||    
T  10192413 ccatcgtgccacgatttttccagtgccttgcctc-aaaactgaaa-cctccatcgtgccacgttgccttgcgatcgtgccacgattccgcataaatctga 10192510  T
Q  253 ttttaagttaactct 267  Q
    |||| ||||||||||    
T  10192511 ttttcagttaactct 10192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 13893347 - 13893269
Alignment:
Q  58 tttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgtt 136  Q
    |||||||||| |||||||||||||||||||||  | |||||||||||||||||||||||||  ||||||||||||||||    
T  13893347 tttgatacaatgtctatatttatagtaaaagtaacccttaaaatttggaacaaatctgcactgaaaatacgtttctgtt 13893269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 38889989 - 38889935
Alignment:
Q  62 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38889989 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 38889935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 159 - 275
Target Start/End: Original strand, 5523041 - 5523156
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    |||||||||||||||||| ||||||||| ||||||||||||  | ||||||||| |||||||||| ||| |||||||||| || |  | | |||||||||    
T  5523041 tgccacgatttttccagtaccttgcctc-aaaactgaaaccaccaatcgtgccatgttgcccagcaatcttgccacgattcctccagatcttgattttaa 5523139  T
Q  259 gttaactctcacgataa 275  Q
    |||||||||||| ||||    
T  5523140 gttaactctcacaataa 5523156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 24979668 - 24979552
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || ||||||||||| |||||||||||| ||||| |  ||||||||||||||||||||||||||  |||||| |||| ||||||||||  |||||    
T  24979668 agtttactctgatacaaggtatatatttatagtgaaagtattacttaaaatttggaacaaatctgcaccaaaaaatatgtttatgttattcgctaccagc 24979569  T
Q  150 gcaccatcatgccacga 166  Q
    | |||||| ||||||||    
T  24979568 gtaccatcgtgccacga 24979552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 10956453 - 10956562
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    |||||||||||||||||||||||||| | ||||||||||||  | ||||||||| | || |||||||| ||||||||||| ||||  | |||||||||||    
T  10956453 tgccacgatttttccagtgccttgcc-ccaaaactgaaacctccaatcgtgccatgatgtccagccat-gtgccacgattcctgcagatcctgattttaa 10956550  T
Q  259 gttaactctcac 270  Q
    ||||||||||||    
T  10956551 gttaactctcac 10956562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 10085493 - 10085605
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctga 252  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||  || ||| |||||||||| |    ||| ||||    
T  10085493 ccatcgtgccacgatttttccagtgccttgcctc-aaaactgaaa-cctccatcgtgccacgttgccttgcgatcatgccacgattccgcataaatctga 10085590  T
Q  253 ttttaagttaactct 267  Q
    |||| ||||||||||    
T  10085591 ttttcagttaactct 10085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 6063744 - 6063809
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  6063744 agtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 6063809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 12268262 - 12268329
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac 118  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  12268262 agtttactctgatacaagttctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcac 12268329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 5886242 - 5886181
Alignment:
Q  55 tgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  5886242 tgctctgataaaaggtctatatttatagtaaaagtttcgcttaaaatctgtaacaaatctgc 5886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 1321228 - 1321162
Alignment:
Q  204 atcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||||||| |||||||||||||| ||||  | | |||||||||||||||||||||    
T  1321228 atcgtgccacgttgcccagcaatcgtgccacgattcctgcagatcttgattttaagttaactctcac 1321162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 50493961 - 50493895
Alignment:
Q  50 cagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||| |||||   ||||||||| || |||||||||||    
T  50493961 cagtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 50493895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 5899576 - 5899492
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatt 238  Q
    ||||| ||||| ||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||  | ||||||||| ||||    
T  5899576 ccatcgtgccatgatttttccagtgccttgcctaaaaaact-aaaacatccatcgtgccacgttgcccttcaatcgtgccatgatt 5899492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 5899717 - 5899656
Alignment:
Q  55 tgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  5899717 tgctctgataaaaggtctatatttatagtaaaagtctcgcttaaaatctgtaacaaatctgc 5899656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 53896492 - 53896557
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||||||||||||||||||| |||||   ||||||||| || |||||||||||    
T  53896492 agtttgctttgatacaaggtctatatttatagtgaaagtcctgcttaaaatctgtaacaaatctgc 53896557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 25388850 - 25388794
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  25388850 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 25388794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 5886101 - 5885984
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacg-ttgcccagccatcgtgccacgatttctg-cgaaacct 250  Q
    ||||| |||||||||||||||||| |||||||| ||||||| ||| | |||||||||||||| |||| |  | |||||||||||| |||||   ||||||    
T  5886101 ccatcgtgccacgatttttccagtaccttgcctaaaaaact-aaaacatccatcgtgccacgtttgcgcttcaatcgtgccacga-ttctgtaaaaacct 5886004  T
Q  251 gattttaagttaactctcac 270  Q
     |||||||||||||||||||    
T  5886003 aattttaagttaactctcac 5885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 6719407 - 6719457
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaat 101  Q
    |||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  6719407 agtttgctctgatacaaggtctatatttatagtaaaagtcttgcttaaaat 6719457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 24177066 - 24177000
Alignment:
Q  204 atcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||||||||| || | ||||||||||||||| |  ||| |||||||||||||||||||||    
T  24177066 atcgtgccacgttgccctgcaaacgtgccacgatttctccagaacttgattttaagttaactctcac 24177000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 25388714 - 25388654
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacg 214  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||    
T  25388714 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccacg 25388654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 46966940 - 46966997
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgca 117  Q
    |||||||| || ||||||||||||||||||  | ||||||||||||||||||||||||    
T  46966940 tgatacaatgtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgca 46966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 38210320 - 38210265
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctg 115  Q
    |||||||||| ||||||||||||||||||| | ||||||||| || ||||||||||    
T  38210320 tgatacaaggcctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctg 38210265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 25388666 - 25388619
Alignment:
Q  223 ccatcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  25388666 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcac 25388619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 814 - 846
Target Start/End: Complemental strand, 47335219 - 47335187
Alignment:
Q  814 agcgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||||    
T  47335219 agcgggagtggttatggtgcataaggaaatcct 47335187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 954 - 994
Target Start/End: Complemental strand, 53161668 - 53161628
Alignment:
Q  954 ttttctttcctattttacctctagttaattgcaaatattcc 994  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  53161668 ttttctttcctattttacccctaattaattgcaaatattcc 53161628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 562069 - 562144
Alignment:
Q  62 atacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatctgcacccaaaatacgtttctgtt 136  Q
    |||||| ||||||||||||||||||| | || |||| |||  |||||||||||||  || ||||||||||||||||    
T  562069 atacaaagtctatatttatagtaaaattatcccttataaaaatggaacaaatctggcccgaaaatacgtttctgtt 562144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 4308577 - 4308615
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  4308577 agtttgctctgatacaaggtctatatttatagtgaaagt 4308615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 6097570 - 6097600
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  6097570 cgggagtggttatggtgcataaggaaatcct 6097600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 9106447 - 9106417
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  9106447 cgggagtggttatggtgcataaggaaatcct 9106417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 10986532 - 10986502
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  10986532 cgggagtggttatggtgcataaggaaatcct 10986502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 917 - 951
Target Start/End: Original strand, 23217930 - 23217964
Alignment:
Q  917 atctatacctattaataaagacaatactttctttt 951  Q
    |||||||||||||||||||||||||||||| ||||    
T  23217930 atctatacctattaataaagacaatactttttttt 23217964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 25690652 - 25690690
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  25690652 agtttgctctgatacaaggtctatatttatagtgaaagt 25690690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 26662424 - 26662454
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  26662424 cgggagtggttatggtgcataaggaaatcct 26662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 26762917 - 26762863
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    ||||||||||| |||||||||||||||||  || || |||| |||||||||||||    
T  26762917 tgatacaaggtttatatttatagtaaaagcatccctaaaaaattggaacaaatct 26762863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 30947797 - 30947827
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  30947797 cgggagtggttatggtgcataaggaaatcct 30947827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 46237644 - 46237674
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  46237644 cgggagtggttatggtgcataaggaaatcct 46237674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 51727302 - 51727340
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  51727302 agtttgctctgatacaaggtctatatttatagtgaaagt 51727340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 455855 - 455826
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  455855 tgatacaaggtctatatttatagtaaaagt 455826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 458232 - 458203
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  458232 tgatacaaggtctatatttatagtaaaagt 458203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 746703 - 746674
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  746703 tgatacaaggtctatatttatagtaaaagt 746674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 3475294 - 3475323
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  3475294 gggagtggttatggtgcataaggaaatcct 3475323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 4104204 - 4104233
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  4104204 tgatacaaggtctatatttatagtaaaagt 4104233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 9595867 - 9595896
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  9595867 gggagtggttatggtgcataaggaaatcct 9595896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 10621847 - 10621876
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  10621847 tgatacaaggtctatatttatagtaaaagt 10621876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 19284850 - 19284821
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  19284850 gggagtggttatggtgcataaggaaatcct 19284821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 25533386 - 25533357
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  25533386 tgatacaaggtctatatttatagtaaaagt 25533357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 27762318 - 27762363
Alignment:
Q  94 cttaaaatttggaacaaatctgcacccaaaatacgtttctgttatt 139  Q
    |||||||| |||||||||||| |||  |||||||||||||||||||    
T  27762318 cttaaaatatggaacaaatcttcactgaaaatacgtttctgttatt 27762363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 31021450 - 31021479
Alignment:
Q  58 tttgatacaaggtctatatttatagtaaaa 87  Q
    ||||||||||||||||||||||||||||||    
T  31021450 tttgatacaaggtctatatttatagtaaaa 31021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 34562394 - 34562423
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  34562394 gggagtggttatggtgcataaggaaatcct 34562423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 42990234 - 42990205
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  42990234 tgatacaaggtctatatttatagtaaaagt 42990205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 53597193 - 53597164
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  53597193 tgatacaaggtctatatttatagtaaaagt 53597164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 54379341 - 54379312
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  54379341 gggagtggttatggtgcataaggaaatcct 54379312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 4e-84; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 43 - 270
Target Start/End: Complemental strand, 7941362 - 7941134
Alignment:
Q  43 tctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcg 141  Q
    ||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7941362 tctctcccggtttgctctgatacaacgtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcg 7941263  T
Q  142 ccgccagcgcaccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttc 240  Q
     | ||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  7941262 tcaccagcgcaccatcgtgccaccatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtgccacgttgcccagccatcgtgccacga-ttc 7941165  T
Q  241 tgc-gaaacctgattttaagttaactctcac 270  Q
    ||| |||||||||||||||||||||||||||    
T  7941164 tgcagaaacctgattttaagttaactctcac 7941134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 11434990 - 11434770
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  11434990 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 11434891  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaa 247  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  11434890 gcaccatcgtgccacgatttttccagtgtcttgcctcaaaaaactgaaa-cctccatcgtgccacgttgcccagccatcgtaccacga-ttctgcagaaa 11434793  T
Q  248 cctgattttaagttaactctcac 270  Q
    |||||||||||||||||||||||    
T  11434792 cctgattttaagttaactctcac 11434770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 51 - 238
Target Start/End: Original strand, 22801160 - 22801346
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| || ||| |||    
T  22801160 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttgaaacaaatctgcactcaaaatacgtttctgttatttgctgccggcg 22801259  T
Q  151 caccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatt 238  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||  | |||||| ||||||||||| ||||||||||||||||    
T  22801260 caccatcgtgccacgatttttccagttccttgcctc-aaaactgaaacctccaatcgtgtcacgttgcccaaccatcgtgccacgatt 22801346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 5637767 - 5638005
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||     
T  5637767 agtttgctcttatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgtttttcgctgccagct 5637866  T
Q  151 caccatcatgccac---------------------gatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgt 229  Q
    ||||||||||||||                     |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||    
T  5637867 caccatcatgccacgatgcgatcccatcgtgacatgatttttccagtgccttgcctc-aaaactgaaa-cctccatcgtgccacgttgcccagcaatcgt 5637964  T
Q  230 gccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||| |   |||||||||||||||||||||||||||    
T  5637965 gccacgattccgcagaaacctgattttaagttaactctcac 5638005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 36919885 - 36920124
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  36919885 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctactattcgctgccagc 36919984  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| ||||||||||||||||||| |||||||| |||| |||||||  | |||||||||||||||||||||||||    
T  36919985 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgacttgcctc-aaaattgaaacctccaatcgtgccacgttgcccagccatcg 36920083  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||| |||  |||||||||||||||||||||||||    
T  36920084 tgccacgattt-tgcagaacctgattttaagttaactctcac 36920124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 60 - 270
Target Start/End: Original strand, 3824880 - 3825111
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||     
T  3824880 tgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgtcgccaacgcaccatcg 3824979  T
Q  159 tgccac---------------------gatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgat 237  Q
    ||||||                     |||||||||||||| ||||||| ||||||||||||  | ||||||||| ||||||||||||||||| |||||     
T  3824980 tgccacgatgcgaccccattgtgccatgatttttccagtgctttgcctc-aaaactgaaacctccaatcgtgccatgttgcccagccatcgtgtcacga- 3825077  T
Q  238 ttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||| |||||||||||||||||||||||||||    
T  3825078 ttctgcagaaacctgattttaagttaactctcac 3825111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 48486354 - 48486114
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  48486354 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagc 48486255  T
Q  150 gcac---------------------catcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    ||||                     |||| ||||||||    ||||||| |||||||||||| ||||||||  | ||||||||||||||| |||||||||    
T  48486254 gcaccattgtgccacattgtgaccccatcgtgccacgaaaaatccagtgacttgcctcaaaa-ctgaaacctccaatcgtgccacgttgctcagccatcg 48486156  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||   ||||||||||||||||||||||||    
T  48486155 tgccacgatttctgcaggacctgattttaagttaactctcac 48486114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 51 - 269
Target Start/End: Complemental strand, 51015281 - 51015042
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||    
T  51015281 agtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaaaatatgtttctgttattcgctgccagc 51015182  T
Q  150 gcaccatcatgccacg---------------------atttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||||||| |||||||                     |||||||||||||||||||| ||||||||||| |||||||||||||||||||||  ||||||     
T  51015181 gcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctaaaaaactgaaa-cctccatcgtgccacgttgccttgccatca 51015083  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactctca 269  Q
    |||||||| |||||| |||| |||||||||||||||||||||    
T  51015082 tgccacga-ttctgcagaaatctgattttaagttaactctca 51015042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 9148286 - 9148055
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||    
T  9148286 agtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttatttgctgccatcg 9148187  T
Q  151 -------------caccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgat 237  Q
                 | ||||| |||||||||||||||||||| ||||||| |||  |||||||  | |||| ||||||||||||||| ||||| |||||||    
T  9148186 tgccacgatgcaaccccatcgtgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgcgccacgttgcccagcaatcgtaccacgat 9148088  T
Q  238 ttctgcgaaacctgattttaagttaactctcac 270  Q
    | |||   | | |||||||||||||||||||||    
T  9148087 tcctgaagatcttgattttaagttaactctcac 9148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 22803032 - 22803148
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  22803032 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaatacgtttttgttattcgctgccagcg 22803131  T
Q  151 caccatcatgccacgat 167  Q
    ||||||| |||||||||    
T  22803132 caccatcgtgccacgat 22803148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 37089681 - 37089789
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||     
T  37089681 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacctaaaaatacgtttctgttattcgccgccagcgcaccatcg 37089780  T
Q  159 tgccacgat 167  Q
    |||||||||    
T  37089781 tgccacgat 37089789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 5198455 - 5198338
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  5198455 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 5198356  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  5198355 gcaccatcgtgccacgat 5198338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 24880476 - 24880371
Alignment:
Q  61 gatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgca-cccaaaatacgtttctgttattcgccgccagcgcaccatcat 159  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||| |    
T  24880476 gatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatacgtttctgttattcgctgccagcgcaccatcgt 24880377  T
Q  160 gccacg 165  Q
    ||||||    
T  24880376 gccacg 24880371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 36921793 - 36922032
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgca-cccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||      
T  36921793 agtttactctgatacaaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatacgtttctgttattcgctgccaat 36921892  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| ||||||||||||||||||| |||||||| ||||||||||||  | ||||||||| |||||||||||||||    
T  36921893 gcaccatcgtgccacaatgcgaccccatcgtgccacgatttttccagtgacttgcctc-aaaactgaaacctccaatcgtgccatgttgcccagccatcg 36921991  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    | ||||||||| |||  |||||||||||||||||||||||||    
T  36921992 taccacgattt-tgcagaacctgattttaagttaactctcac 36922032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 38409234 - 38409117
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| |||||||||| |    
T  38409234 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgccgccaac 38409135  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  38409134 gcaccatcgtgccacgat 38409117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 60 - 270
Target Start/End: Original strand, 11006548 - 11006780
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||| || ||||||||| || || ||||||||||||||     
T  11006548 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagcgcaccatcg 11006647  T
Q  159 tgccacgat---------------------ttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgat 237  Q
    |||||||||                     |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||     
T  11006648 tgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaattgaaacc-tccatcgtgccacgttgcccagcgatcgtgccacga- 11006745  T
Q  238 ttctgc--gaaacctgattttaagttaactctcac 270  Q
    ||||||   ||||||||||||||||||||||||||    
T  11006746 ttctgcataaaacctgattttaagttaactctcac 11006780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 9174444 - 9174683
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||  || ||||||||||||||| |||||| ||||||||| ||| | ||||||    
T  9174444 agtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaaactgtaacaaatctgcacccaaaaatatgtttctgtttttccctgccagc 9174543  T
Q  150 gcaccatcatgccac---------------------gatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||||||| ||||||                     ||||||||||||||||||||| | ||||| ||| |||||||||||| |||||||| |||| |||    
T  9174544 gcaccatcgtgccacgatgagaccccatcgtgccatgatttttccagtgccttgcctaataaact-aaaacctccatcgtgctacgttgcctagccgtcg 9174642  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||| ||||||  |||||||||||||||||||||||||    
T  9174643 tgccacga-ttctgcagaacctgattttaagttaactctcac 9174683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 22044688 - 22044929
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||| ||| | ||||||     
T  22044688 agtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactaaaaatatgtttctgtttttccctgccagca 22044787  T
Q  151 ca---------------------ccatcatgccacgatttttccagtgccttgcctc--aaaaactgaaaccctccatcgtgccacgttgcccagccatc 227  Q
    ||                     ||||| ||||||||||||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||  | |||    
T  22044788 caccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaaaaatgaaa-cctccatcgtgccacgttgcccttcaatc 22044886  T
Q  228 gtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||| ||||  | | |||||||||||||||||||||    
T  22044887 gtgccacgattcctgcagatcttgattttaagttaactctcac 22044929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 16932243 - 16932359
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  16932243 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 16932340  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  16932341 attttaagttaactctcac 16932359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 61 - 165
Target Start/End: Complemental strand, 24879014 - 24878909
Alignment:
Q  61 gatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatcat 159  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||  ||||||| |||||| |    
T  24879014 gatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaaaatacgtttctgttattcgatgccagcgtaccatcgt 24878915  T
Q  160 gccacg 165  Q
    ||||||    
T  24878914 gccacg 24878909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 24888831 - 24888714
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  24888831 agtttgctctgatacaaggtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 24888732  T
Q  150 gcaccatcatgccacgat 167  Q
     ||||||| |||||||||    
T  24888731 acaccatcgtgccacgat 24888714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 31849897 - 31850137
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  31849897 agtttgctctgatacaagacctatatttctagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 31849996  T
Q  150 gcaccatcatgccac---------------------gatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||||||| ||||||                     |||||||||||||||||||| | ||||||||||||  | |||||||||||||||||||| ||||    
T  31849997 gcaccatcgtgccacgatgcgaccccatcgtgccaagatttttccagtgccttgcc-ccaaaactgaaacctccaatcgtgccacgttgcccagcaatcg 31850095  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||| ||| ||||  | | |||||||||||||||||||||    
T  31850096 tgccacaattcctgcagatcttgattttaagttaactctcac 31850137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 9176918 - 9177034
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| | || ||||||||||| |||||| ||||||||    
T  9176918 ccatcgtgccacgatttttccagtgccttgcctaaaaaact-aaaacctccatcgtgccacgttgcctaaccgtcgtgccacga-ttctgcagaaacctg 9177015  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  9177016 attttaagttaactctcac 9177034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 16934597 - 16934713
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| |||||||||||| ||||||||||| ||||||||||| |||||| ||||||||    
T  16934597 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccatgttgcccagccgtcgtgccacga-ttctgcagaaacctg 16934694  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  16934695 attttaagttaactctcac 16934713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 47274753 - 47274647
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||| |||||||||     
T  47274753 tgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaaaatacgtttatgttattcgctgccatcgcaccatcg 47274654  T
Q  159 tgccacg 165  Q
    |||||||    
T  47274653 tgccacg 47274647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 22046983 - 22047099
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    ||||||||  ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||| ||| | ||||||     
T  22046983 agtttgctccgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactaaaaatatgtttctgtttttccctgccagca 22047082  T
Q  151 caccatcatgccacgat 167  Q
    ||||||| |||||||||    
T  22047083 caccatcgtgccacgat 22047099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 619745 - 619860
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  |||| |||||| ||||||||||||||||||||||    
T  619745 agtttactctgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaaaaaatctctacccaaaaatatgtttctgttattcgccgccagc 619844  T
Q  150 gcaccatcatgccacg 165  Q
    |||||||  |||||||    
T  619845 gcaccattgtgccacg 619860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 8756557 - 8756663
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccca-aaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| | ||||| |||||||||||||||| ||||||||||| ||    
T  8756557 tgatacaaggtctatatttatagtaaaagtatcgtttataatttggaacaaatctgcaccgagaaatatgtttctgttattcgcctccagcgcaccaaca 8756656  T
Q  159 tgccacg 165  Q
    || ||||    
T  8756657 tggcacg 8756663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 22780835 - 22780951
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||| ||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| ||||| |||||| |||||| ||||||||    
T  22780835 ccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagctatcgtaccacga-ttctgcagaaacctg 22780932  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  22780933 attttaagttaactctcac 22780951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 22783200 - 22783316
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||| ||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| ||||| |||||| |||||| ||||||||    
T  22783200 ccatcgtgccatgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagctatcgtaccacga-ttctgcagaaacctg 22783297  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  22783298 attttaagttaactctcac 22783316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 40091713 - 40091820
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||   |||||||||||  ||||||||| | |||     
T  40091713 agtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcactgaaaaatacgtttacgttattcgctgtcagt 40091812  T
Q  150 gcaccatc 157  Q
    ||||||||    
T  40091813 gcaccatc 40091820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 52942756 - 52942860
Alignment:
Q  62 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagcgcaccatcatg 160  Q
    |||||||||||||||||||||| ||||| |  ||||||||||||||||||||||||||  |||||| |||| |||||||||| ||||||||| |||| ||    
T  52942756 atacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcaccaaaaaatatgtttatgttattcgctgccagcgcatcatcgtg 52942855  T
Q  161 ccacg 165  Q
    |||||    
T  52942856 ccacg 52942860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 160 - 269
Target Start/End: Original strand, 22803162 - 22803270
Alignment:
Q  160 gccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaag 259  Q
    |||||||||||||||||||||| |||||||| ||||||||  | |||||||||||||||||||||||||| ||||||||     ||||  ||||||||||    
T  22803162 gccacgatttttccagtgcctttcctcaaaa-ctgaaacctccaatcgtgccacgttgcccagccatcgtaccacgattctatagaaatttgattttaag 22803260  T
Q  260 ttaactctca 269  Q
    ||||||||||    
T  22803261 ttaactctca 22803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 52942910 - 52943002
Alignment:
Q  173 cagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactc 266  Q
    ||||| |||||||||||  ||||||||  | |||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  52942910 cagtgacttgcctcaaag-ctgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatttttgcaaaacctgattttaagttaactc 52943002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 24888701 - 24888594
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgatttta 257  Q
    |||||||||||||||||||| ||||||| |||  |||||||  | |||||||||||||||| |||||||||||||| | |||||| |||| |||||||||    
T  24888701 tgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccac-aattctgcagaaatctgatttta 24888604  T
Q  258 agttaactct 267  Q
    ||||||||||    
T  24888603 agttaactct 24888594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 37089802 - 37089910
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgatttta 257  Q
    ||||||||||||||||||||||  ||| ||||||| ||||    |||||||||||||||||  ||||||||||||||| |||||| |||| |||||||||    
T  37089802 tgccacgatttttccagtgcctcacctaaaaaactaaaacatctcatcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaatctgatttta 37089900  T
Q  258 agttaactct 267  Q
    ||||||||||    
T  37089901 agttaactct 37089910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 38409104 - 38408994
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgatttta 257  Q
    |||||||||||||||||||| ||||||| |||  |||||||  | ||||||||||| |||||||| |||||||||||| |||||| |||| || ||||||    
T  38409104 tgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgatgcccagcaatcgtgccacga-ttctgcagaaatctaatttta 38409007  T
Q  258 agttaactctcac 270  Q
    |||||||||||||    
T  38409006 agttaactctcac 38408994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 16934441 - 16934506
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||| || |||||||||||    
T  16934441 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16934506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 18847188 - 18847123
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||| |||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  18847188 agtttgttttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 18847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 40091837 - 40091952
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctga 252  Q
    |||||||| ||||||||||||| || ||| | |||||| |||||| |  | ||||||||||||| |||| ||| ||||||||||||  |||  |||||||    
T  40091837 ccatcatggcacgatttttccaatggcttacttcaaaa-ctgaaatctccaatcgtgccacgttacccaaccaccgtgccacgattattgcagaacctga 40091935  T
Q  253 ttttaagttaactctca 269  Q
    |||||||||||||||||    
T  40091936 ttttaagttaactctca 40091952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 22048492 - 22048574
Alignment:
Q  187 aaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||  |||| | | |||||||||||||||||||||    
T  22048492 aaaaactgaaacc-tccatcgtgccacgttgcccttcaatcgtgccacgattcttgcggatcttgattttaagttaactctcac 22048574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 18847034 - 18846924
Alignment:
Q  161 ccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcg---aaacctgatttta 257  Q
    |||||||||||||||| ||||||||||||| ||||||||  | ||||||||||| | |||| | |||||||||||||| ||||    ||| |||||||||    
T  18847034 ccacgatttttccagtaccttgcctcaaaa-ctgaaacctccaatcgtgccacgattcccaacaatcgtgccacgatt-ctgcagaaaaatctgatttta 18846937  T
Q  258 agttaactctcac 270  Q
    |||||||||||||    
T  18846936 agttaactctcac 18846924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 9176772 - 9176837
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||  || |||||||||||    
T  9176772 agtttgctttgatacaaggtctatatttatagtaaatgtcttgcttaaaaactgtaacaaatctgc 9176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 16932087 - 16932152
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  16932087 agtttgctttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 16932152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 11008877 - 11008933
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  11008877 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 11008933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 4569978 - 4569899
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttatt 139  Q
    ||||||||||  |||||||||||| |||||  | |||||||| |||||||||||| |||  |||||||||||||||||||    
T  4569978 tgatacaaggcttatatttatagtgaaagtaacccttaaaatatggaacaaatcttcactgaaaatacgtttctgttatt 4569899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 18847124 - 18847049
Alignment:
Q  93 gcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccacgat 167  Q
    |||| ||||||| ||||||||||||||||||| || ||||||||| ||| |||| ||||||||||| |||||||||    
T  18847124 gctttaaatttgtaacaaatctgcacccaaaaatatgtttctgtttttccccgcgagcgcaccatcgtgccacgat 18847049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 138
Target Start/End: Complemental strand, 25357671 - 25357583
Alignment:
Q  52 gtttgctttgatacaaggtctatatttatagtaaaagtttcgct--taaaatttggaacaaatctgcaccc-aaaatacgtttctgttat 138  Q
    |||| ||||||||||||||||||||||||||||||||| || ||  ||||| ||||||||||||||  ||| |||||||| |||||||||    
T  25357671 gtttactttgatacaaggtctatatttatagtaaaagtatccctcgtaaaa-ttggaacaaatctgagcccaaaaatacgattctgttat 25357583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 11008932 - 11009007
Alignment:
Q  93 gcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatcatgccacgat 167  Q
    ||||||||| || ||||||||||||||| |||||| ||||||||| || || ||||| |||||||| |||||||||    
T  11008932 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgttttttgctgccagtgcaccatcgtgccacgat 11009007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 16638710 - 16638636
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctg 134  Q
    ||||||||||| ||||||| ||| || |||  | |||||||||||||||||| ||||||  ||||||||||||||    
T  16638710 tgatacaaggtttatatttttagaaagagtaacccttaaaatttggaacaaacctgcactgaaaatacgtttctg 16638636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 17662536 - 17662574
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  17662536 agtttgctctgatacaaggtctatatttatagtaaaagt 17662574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 44600136 - 44600174
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44600136 agtttgctttaatacaaggtctatatttatagtaaaagt 44600174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 52043737 - 52043791
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    |||||||||||||||||||||||||||||  || || |||| |||||||||||||    
T  52043737 tgatacaaggtctatatttatagtaaaagcatccctaaaaaattggaacaaatct 52043791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 11009014 - 11009075
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacg 214  Q
    ||||| ||||||||||||||||||||||||||| ||||| |  || ||||||| ||||||||    
T  11009014 ccatcgtgccacgatttttccagtgccttgcctaaaaaaattgaaacctccattgtgccacg 11009075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 22780687 - 22780744
Alignment:
Q  59 ttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  22780687 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 22783052 - 22783109
Alignment:
Q  59 ttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||| ||||||||||||||||||   ||||||||| || |||||||||||    
T  22783052 ttgatacaaggtttatatttatagtaaaagtcctgcttaaaatctgtaacaaatctgc 22783109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 878 - 918
Target Start/End: Original strand, 9813017 - 9813057
Alignment:
Q  878 aaaatcattagatgtatttaatgatttacagcactctgcat 918  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  9813017 aaaatcattagatgtacttaatgatttccagcactctgcat 9813057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 954 - 994
Target Start/End: Complemental strand, 51033305 - 51033265
Alignment:
Q  954 ttttctttcctattttacctctagttaattgcaaatattcc 994  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  51033305 ttttctttcctattttacccctaattaattgcaaatattcc 51033265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 918
Target Start/End: Original strand, 51076966 - 51077009
Alignment:
Q  875 tccaaaatcattagatgtatttaatgatttacagcactctgcat 918  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||    
T  51076966 tccaaaatcattagatgtatttaatggtttccagcaccctgcat 51077009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 918
Target Start/End: Complemental strand, 53526427 - 53526384
Alignment:
Q  875 tccaaaatcattagatgtatttaatgatttacagcactctgcat 918  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||    
T  53526427 tccaaaatcattagatgtatttaatggtttccagcaccctgcat 53526384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 2485171 - 2485209
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  2485171 agtttgctctgatacaaggtctatatttatagtgaaagt 2485209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 6764874 - 6764836
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  6764874 agtttgctctgatacaaggtctatatttatagtgaaagt 6764836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 8631721 - 8631759
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  8631721 agtttgctttgatacaaagtctatatttatagtgaaagt 8631759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 11786154 - 11786124
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  11786154 cgggagtggttatggtgcataaggaaatcct 11786124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 11798321 - 11798291
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  11798321 cgggagtggttatggtgcataaggaaatcct 11798291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 89
Target Start/End: Original strand, 22134936 - 22134966
Alignment:
Q  59 ttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||||||||||||||||||||||||||    
T  22134936 ttgatacaaggtctatatttatagtaaaagt 22134966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 24348241 - 24348211
Alignment:
Q  59 ttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||||||||||||||||||||||||||    
T  24348241 ttgatacaaggtctatatttatagtaaaagt 24348211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 30358887 - 30358857
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  30358887 cgggagtggttatggtgcataaggaaatcct 30358857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 40637109 - 40637071
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  40637109 agtttgctctgatacaaggtctatatttatagtgaaagt 40637071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 40999254 - 40999308
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    ||||| ||||| |||||||||||||||| |  | |||||||||||||||||||||    
T  40999254 tgatataaggtttatatttatagtaaaaataacccttaaaatttggaacaaatct 40999308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 47868436 - 47868398
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  47868436 agtttgctctgatacaaggtctatatttatagtgaaagt 47868398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 49425943 - 49425973
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  49425943 cgggagtggttatggtgcataaggaaatcct 49425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 917 - 946
Target Start/End: Original strand, 581742 - 581771
Alignment:
Q  917 atctatacctattaataaagacaatacttt 946  Q
    ||||||||||||||||||||||||||||||    
T  581742 atctatacctattaataaagacaatacttt 581771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 14787740 - 14787769
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  14787740 tgatacaaggtctatatttatagtaaaagt 14787769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 15051023 - 15051052
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  15051023 gggagtggttatggtgcataaggaaatcct 15051052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 22132706 - 22132735
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  22132706 tgatacaaggtctatatttatagtaaaagt 22132735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 47211053 - 47211082
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  47211053 tgatacaaggtctatatttatagtaaaagt 47211082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 53405153 - 53405124
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  53405153 tgatacaaggtctatatttatagtaaaagt 53405124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 53441499 - 53441470
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  53441499 gggagtggttatggtgcataaggaaatcct 53441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 4e-84; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 6822996 - 6822776
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  6822996 agtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacatttctattattcgccgccagc 6822897  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaa 247  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  6822896 gcaccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtgccacgttgcccagccatcgtgccacga-ttctgcagaaa 6822799  T
Q  248 cctgattttaagttaactctcac 270  Q
    |||||||||||||||||||||||    
T  6822798 cctgattttaagttaactctcac 6822776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 13761818 - 13761578
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13761818 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagc 13761719  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
     ||                     ||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  13761718 acaccatcgtgccgcgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaa-cctccatcatgccacgttgcccagccatcg 13761620  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  13761619 tgccacga-ttctgcagaaacctgattttaagttaactctcac 13761578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 51752346 - 51752105
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  51752346 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgccgccagc 51752247  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatc 227  Q
    |||                     ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  51752246 gcaccatcgtgccacgatgcggccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtgccacgttgcccaaccatc 51752148  T
Q  228 gtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  51752147 gtgccacga-ttctgcagaaacctgattttaagttaactctcac 51752105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 51750020 - 51749779
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  51750020 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagc 51749921  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatc 227  Q
    |||                     ||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||    
T  51749920 gcactatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtaccacgttgcccaaccatc 51749822  T
Q  228 gtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||    
T  51749821 gtgccacga-ttctgcagaaacttgattttaagttaactctcac 51749779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 51 - 269
Target Start/End: Original strand, 38925778 - 38925996
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||  ||||||| ||||| |||| |    
T  38925778 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaataaatctgcacccaaaaatacacttctgttgttcgctgccaac 38925877  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    || ||||| |||||| |    ||||||  |||| ||| ||||||||||||  | |||||||||||||||||||||||||| |||||||||||||| ||||    
T  38925878 gccccatcgtgccacaaaaaatccagtaacttgtctc-aaaactgaaacctccaatcgtgccacgttgcccagccatcgtaccacgatttctgcggaacc 38925976  T
Q  250 tgattttaagttaactctca 269  Q
    ||||||||||||||||||||    
T  38925977 tgattttaagttaactctca 38925996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 76 - 270
Target Start/End: Complemental strand, 49687496 - 49687302
Alignment:
Q  76 tttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccacgatttttcca 174  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||||| ||||||||    ||||    
T  49687496 tttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgtcagcgcaccatcgtgccacgaaaaatcca 49687397  T
Q  175 gtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||| |||||||||||| ||||||||  | || ||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||||    
T  49687396 gtgacttgcctcaaaa-ctgaaacctccaattgtgccacgttgcccagccatcatgccacgatttctacataacctgattttaagttaactctcac 49687302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 47451629 - 47451406
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||| | ||||    
T  47451629 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaatatttggaacaaatctgcaccaaaaaatacgtttctgttattcgctgtcagc 47451530  T
Q  150 gcaccatcatgccacgat---ttttccagt-gccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcga 245  Q
    |||||||| |||||||||    | ||  ||    ||||||| ||||||||||||  | |||||||||| ||||||||||||||||||||||||||||| |    
T  47451529 gcaccatcgtgccacgatgcgatctcatgtatatttgcctc-aaaactgaaacctccaatcgtgccacattgcccagccatcgtgccacgatttctgcaa 47451431  T
Q  246 aacctgattttaagttaactctcac 270  Q
    || ||||||| ||||||||||||||    
T  47451430 aatctgatttgaagttaactctcac 47451406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 51 - 238
Target Start/End: Complemental strand, 6823865 - 6823656
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  6823865 agtttgctctgatacaaggtctatataaatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgccgccagc 6823766  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatc 227  Q
    |||                     |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  6823765 gcaccatcgtgccacgatgcgaccccatcatgccacgatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtgccacgttgcccaaccatc 6823667  T
Q  228 gtgccacgatt 238  Q
    |||||| ||||    
T  6823666 gtgccatgatt 6823656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 20302440 - 20302199
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||    
T  20302440 agtttgctctgatacaaggtctatatttataataaaagtttcacttaaaatttggaacaaatatgcacccaaaaatatgtttctgttattcgccgccagc 20302341  T
Q  150 gcaccatcatgccacg---------------------atttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatc 227  Q
    |||||||| |||||||                     ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  ||||||    
T  20302340 gcaccatcgtgccacgatgcgaccccatcgtgccacaatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtgccacgttgccttgccatc 20302242  T
Q  228 gtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
     |||| ||| |||||| |||| ||||||||||||||||||||||    
T  20302241 atgccgcga-ttctgcagaaatctgattttaagttaactctcac 20302199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 49 - 270
Target Start/End: Original strand, 10400126 - 10400368
Alignment:
Q  49 ccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgcca 147  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || ||||    
T  10400126 ccagtttgctctgatacaaggtctatatttatagaaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttatttgctgcca 10400225  T
Q  148 gcgcaccatcatgccacgatt---------------------tttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccat 226  Q
    |||||||||| |||||||||                      |||||||||| ||||||||||   |||||||  | |||||||||||||||||||| ||    
T  10400226 gcgcaccatcgtgccacgatgcgaccccatcgtgccacgatatttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcccagcaat 10400324  T
Q  227 cgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||||| |   |||||||||||||||||||||||||||    
T  10400325 cgtgccacgattccgcagaaacctgattttaagttaactctcac 10400368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 28207375 - 28207481
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||     
T  28207375 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaaaacgtttatgttattcgccgccagcgcaccatcg 28207474  T
Q  159 tgccacg 165  Q
    |||||||    
T  28207475 tgccacg 28207481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 15823527 - 15823287
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgca-cccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| |||||||||||| || || |||    
T  15823527 agtttactttgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatatgtttctgttatttgctgctagc 15823428  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| |||||||||||||| ||||| ||||||| |||  |||||||  | |||||||||||||||||||||||||    
T  15823427 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttctagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcccagccatcg 15823329  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||  | |||||||||||||||||||||||    
T  15823328 tgccacgattcctgcagatcctgattttaagttaactctcac 15823287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 28840659 - 28840419
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  28840659 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 28840560  T
Q  150 gcaccatcatgccacg---------------------atttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
     ||||||| |||||||                     ||||||||||| |||||||| |||||||||||||  | ||||||||||||||||  |||||||    
T  28840559 acaccatcgtgccacgatgcgatcccatcgtgccacaatttttccagtaccttgcct-aaaaactgaaacctccaatcgtgccacgttgccttgccatcg 28840461  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||  | |||||||||||||||||| ||||    
T  28840460 tgccacgattcctgcagatcctgattttaagttaactttcac 28840419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 41646901 - 41646786
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgca-cccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||     
T  41646901 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcatccaaaaatatgtttctgttattcgctgccagt 41646802  T
Q  150 gcaccatcatgccacg 165  Q
    |||||||| |||||||    
T  41646801 gcaccatcgtgccacg 41646786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 3579927 - 3580033
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| | ||||||||||| || ||||||||||||||||||||||     
T  3579927 tgatacaaggtctatatttaaagtaaaagtatcgcttaaaatttggaacaaatttgcactctaaaatacgtttatgatattcgccgccagcgcaccatcg 3580026  T
Q  159 tgccacg 165  Q
    |||||||    
T  3580027 tgccacg 3580033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 13215053 - 13214947
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| || |||| | |||||||     
T  13215053 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttttgttatttgctgccaacacaccatcg 13214954  T
Q  159 tgccacg 165  Q
    |||||||    
T  13214953 tgccacg 13214947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 58 - 235
Target Start/End: Original strand, 14098277 - 14098453
Alignment:
Q  58 tttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccat 156  Q
    |||||||||||||||||||||||||| ||||| |  ||||||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  14098277 tttgatacaaggtctatatttatagtgaaagtattacttaaaatttggaac-aatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccat 14098375  T
Q  157 catgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacg 235  Q
    | ||| ||||    ||||||| ||||| || ||| ||||||||  | ||||||||||| ||| || |||||||||||||    
T  14098376 cgtgcaacgaaaaatccagtgacttgcgtc-aaagctgaaacctccaatcgtgccacggtgctcaaccatcgtgccacg 14098453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 16231518 - 16231374
Alignment:
Q  93 gcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccacgatttttccagtgccttgcctcaaaaa 191  Q
    ||||||||| || ||||||||||||||||||| || |||| | || ||  |||||||||||||||| ||||||||||||||||||| ||||||  |||||    
T  16231518 gcttaaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatttttccagtgtcttgcccaaaaaa 16231420  T
Q  192 ctgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatt 238  Q
    || ||| |||||||||||||||||||||||||| |||||||||||||    
T  16231419 ct-aaaacctccatcgtgccacgttgcccagccgtcgtgccacgatt 16231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 47179545 - 47179429
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||| ||||||||||||  ||||||| ||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  47179545 ccatcgtgccacgattttttcagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 47179448  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  47179447 attttaagttaactctcac 47179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 153 - 267
Target Start/End: Complemental strand, 16226004 - 16225891
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||| || ||||||||||| |||||| ||||||||    
T  16226004 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccaaccgtcgtgccacga-ttctgcagaaacctg 16225907  T
Q  252 attttaagttaactct 267  Q
    ||||||||||||||||    
T  16225906 attttaagttaactct 16225891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 47177194 - 47177079
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||| | ||||||||||| |||||| ||||||||    
T  47177194 ccatcgtgccacgatttttccagtgtcttgcc-caaaaactaaaacc-tccatcgtgccacgttgcccagtcgtcgtgccacga-ttctgcagaaacctg 47177098  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  47177097 attttaagttaactctcac 47177079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 28842474 - 28842357
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| | |||||| ||||||||| ||||| |||||     
T  28842474 agtttgctctgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaatatgtttctgtttttcgctgccagg 28842375  T
Q  150 gcaccatcatgccacgat 167  Q
     ||||||| |||||||||    
T  28842374 acaccatcgtgccacgat 28842357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 39462500 - 39462385
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc--aaaatacgtttctgttattcgccgccag 148  Q
    ||||| || |||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||  |||||||||||||||||||| | || ||    
T  39462500 agtttactctgatacaaggtctatatttatagtgaaagtattacttaaaatttggaacaaatctgcacccaaaaaatacgtttctgttattcactgcaag 39462401  T
Q  149 cgcaccatcatgccac 164  Q
    ||||||||| ||||||    
T  39462400 cgcaccatcgtgccac 39462385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 30790703 - 30790808
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||| |||| ||| || |||||||||||||     
T  30790703 tgatacaatgtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactgaaaaatacgtttatgtttttcccctccagcgcaccatcg 30790802  T
Q  159 tgccac 164  Q
    ||||||    
T  30790803 tgccac 30790808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 20291386 - 20291281
Alignment:
Q  165 gatttttccagtgccttgcctcaaaaa-ctgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagtta 262  Q
    ||||||||||||||| ||||||||||| |||||||| |||| ||||||||||||||  ||||||||||||||| |||||| |||| ||||||||||||||    
T  20291386 gatttttccagtgccatgcctcaaaaaactgaaacc-tccaccgtgccacgttgccttgccatcgtgccacga-ttctgcagaaatctgattttaagtta 20291289  T
Q  263 actctcac 270  Q
    ||||||||    
T  20291288 actctcac 20291281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 23783355 - 23783239
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  23783355 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 23783258  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  23783257 attttaagttaactctcac 23783239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 28842350 - 28842234
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctga 252  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||  | |||||||||||| |||  ||||||||||||||||| || |  | |||||    
T  28842350 ccatcgtgccacgatttttccagtaccttgcct-aaaaactgaaacctccaatcgtgccacgtagccttgccatcgtgccacgattcctacagatcctga 28842252  T
Q  253 ttttaagttaactctcac 270  Q
    ||||||||||||| ||||    
T  28842251 ttttaagttaactttcac 28842234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 16231582 - 16231517
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  16231582 agtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 16231517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 14098441 - 14098509
Alignment:
Q  202 ccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||||| ||| ||||||||||||||||||||||||  || ||||||||||||||||||||||    
T  14098441 ccatcgtgccacggtgctcagccatcgtgccacgatttctgcagaatctgattttaagttaactctcac 14098509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 13214920 - 13214834
Alignment:
Q  171 tccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    ||||||| |||||||||||| ||||||||  | |||||||||||||||||| ||||||||||||||||| |||  |||||||||||||    
T  13214920 tccagtgacttgcctcaaaa-ctgaaacctccaatcgtgccacgttgcccaaccatcgtgccacgatttttgcataacctgattttaa 13214834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 16226148 - 16226085
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||    
T  16226148 agtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatct 16226085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 39462349 - 39462259
Alignment:
Q  179 cttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||||| ||||||||    |||||||||||||||||| |||| ||| ||||||||||||  |||||||||||||||||||||||||    
T  39462349 cttgcctcaaaa-ctgaaacctctaatcgtgccacgttgcccaaccattgtgtcacgatttctgcagaacctgattttaagttaactctcac 39462259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 47177339 - 47177276
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||| || |||||||||    
T  47177339 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 47177276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 47179690 - 47179627
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||| || |||||||||    
T  47179690 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctgtaacaaatct 47179627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 3580050 - 3580154
Alignment:
Q  161 ccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagt 260  Q
    |||||||||||||| || ||||||||| || |||||||   | || ||| |||||||||| || |||||||||||||| ||||  |||||||||||||||    
T  3580050 ccacgatttttccaatgacttgcctcataa-ctgaaacatccaattgtgtcacgttgccctgcaatcgtgccacgattcctgcataacctgattttaagt 3580148  T
Q  261 taactc 266  Q
    ||||||    
T  3580149 taactc 3580154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 23783532 - 23783467
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  23783532 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 23783467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 20291436 - 20291390
Alignment:
Q  53 tttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaa 99  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||    
T  20291436 tttgctctaatacaaggtctatatttatagtaaaagtttcgcttaaa 20291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23785957 - 23785919
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctc 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23785957 gactccaatcctaatagtgtttctctctatctcaatctc 23785919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 24325637 - 24325599
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  24325637 agtttgctctgatacaaggtctatatttatagtaaaagt 24325599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 28207540 - 28207581
Alignment:
Q  225 atcgtgccacgatttctgcgaaacctgattttaagttaactc 266  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  28207540 atcgtgccacgatttctgcagaacctgattttaagttaactc 28207581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 41646727 - 41646682
Alignment:
Q  225 atcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  41646727 atcgtgccacgatttctgcagaacatgattttaagttaactctcac 41646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 27916471 - 27916415
Alignment:
Q  58 tttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    |||||||||| ||||||||||||||||||||| || ||  ||| |||||||||||||    
T  27916471 tttgatacaatgtctatatttatagtaaaagtatccctccaaaattggaacaaatct 27916415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 49959016 - 49958940
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgtt 136  Q
    ||||||||||||||||||||||| |||||  || |  |||||||||||||||||  |  ||||||||||||| ||||    
T  49959016 tgatacaaggtctatatttatagcaaaagcatcccacaaaatttggaacaaatccacgtccaaaatacgtttatgtt 49958940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 15295148 - 15295183
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaa 86  Q
    |||||||| |||||||||||||||||||||||||||    
T  15295148 agtttgctctgatacaaggtctatatttatagtaaa 15295183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 16976135 - 16976105
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  16976135 cgggagtggttatggtgcataaggaaatcct 16976105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 19897646 - 19897676
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  19897646 cgggagtggttatggtgcataaggaaatcct 19897676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 26613549 - 26613603
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    ||||||||||||||||||||||| |||||  || || |||| |||||||||||||    
T  26613549 tgatacaaggtctatatttatagcaaaagaatccctcaaaaattggaacaaatct 26613603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 31084452 - 31084422
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  31084452 cgggagtggttatggtgcataaggaaatcct 31084422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 48762217 - 48762247
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  48762217 cgggagtggttatggtgcataaggaaatcct 48762247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 2510637 - 2510666
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  2510637 tgatacaaggtctatatttatagtaaaagt 2510666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 2617497 - 2617460
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaag 88  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  2617497 agtttgctctgatacaaggtctatatttatagtgaaag 2617460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 6314295 - 6314266
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  6314295 gggagtggttatggtgcataaggaaatcct 6314266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 9459732 - 9459761
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  9459732 tgatacaaggtctatatttatagtaaaagt 9459761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 9463559 - 9463588
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  9463559 tgatacaaggtctatatttatagtaaaagt 9463588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 12302819 - 12302848
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  12302819 tgatacaaggtctatatttatagtaaaagt 12302848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 877 - 918
Target Start/End: Original strand, 14229243 - 14229284
Alignment:
Q  877 caaaatcattagatgtatttaatgatttacagcactctgcat 918  Q
    ||||||||||||||||| |||||| ||| |||||||||||||    
T  14229243 caaaatcattagatgtacttaatggtttccagcactctgcat 14229284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 18800878 - 18800907
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  18800878 tgatacaaggtctatatttatagtaaaagt 18800907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 21255835 - 21255864
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  21255835 gggagtggttatggtgcataaggaaatcct 21255864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 23817489 - 23817460
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  23817489 gggagtggttatggtgcataaggaaatcct 23817460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 24636105 - 24636076
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  24636105 gggagtggttatggtgcataaggaaatcct 24636076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 31735834 - 31735863
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  31735834 tgatacaaggtctatatttatagtaaaagt 31735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 43104131 - 43104102
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  43104131 tgatacaaggtctatatttatagtaaaagt 43104102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 43452721 - 43452692
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  43452721 gggagtggttatggtgcataaggaaatcct 43452692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 46432037 - 46432066
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  46432037 tgatacaaggtctatatttatagtaaaagt 46432066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 47906236 - 47906207
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  47906236 tgatacaaggtctatatttatagtaaaagt 47906207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 9e-82; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 9e-82
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 25921771 - 25921991
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||    
T  25921771 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgtcagc 25921870  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaa 247  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||||| ||||    
T  25921871 gcaccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtgccacgttgtccaaccatcgtgccacga-ttctgcagaaa 25921968  T
Q  248 cctgattttaagttaactctcac 270  Q
    |||||||||||||||||||||||    
T  25921969 cctgattttaagttaactctcac 25921991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 39798075 - 39797850
Alignment:
Q  45 tcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgcc 143  Q
    ||||| ||||| || | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||     
T  39798075 tcttcaagtttactctaatacaaggtctatatttatagtaaaagttttgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgct 39797976  T
Q  144 gccagcgcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc 243  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||    
T  39797975 gccagcgcaccatcgtgccatgatttttccggtgccttgcctcaaaaactgaaa-cctccatcatgccacgttgcccagccatcgtgccacga-ttatgc 39797878  T
Q  244 -gaaacctgattttaagttaactctcac 270  Q
     |||||||||||||||||||||||||||    
T  39797877 agaaacctgattttaagttaactctcac 39797850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 2174900 - 2174681
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||| || |||||||||||||||  |||||||||||||||||||||||||||| ||||| || ||||||||| ||||| |||||     
T  2174900 agtttgctctgatacaaggcctgtatttatagtaaaagcatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagt 2174801  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaac 248  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||| |||||    
T  2174800 gcaccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaa-cctccatcgtgccacgttgccttgccatcgtgccacga-ttctgcagaaac 2174703  T
Q  249 ctgattttaagttaactctcac 270  Q
    ||||||||||||||||||||||    
T  2174702 ctgattttaagttaactctcac 2174681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 38882086 - 38881846
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38882086 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgccgccagc 38881987  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  38881986 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaact-aaaacctccatcgtgccacgttgcccagcaatcg 38881888  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||  | | |||||||||||||||||||||    
T  38881887 tgccacgattcctgcagatcttgattttaagttaactctcac 38881846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 60 - 270
Target Start/End: Original strand, 31466285 - 31466495
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| || ||||| | ||||| ||||||||     
T  31466285 tgatacaaggtctatatttatagtaaaagtgtcgcttaaaatttggaacaaatctgcacccaaaaatacatttatggtattccctgccagtgcaccatcg 31466384  T
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    ||||| ||||||||||||| |||||||| | |||||||||    ||||||||||||||||||  | |||||||||||||| |||| ||||||||||||||    
T  31466385 tgccaagatttttccagtgacttgcctc-ataactgaaacatctcatcgtgccacgttgcccttcaatcgtgccacgattcctgcaaaacctgattttaa 31466483  T
Q  259 gttaactctcac 270  Q
    ||||||||||||    
T  31466484 gttaactctcac 31466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 12556221 - 12556440
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| || ||||| ||| |||||||||||||| ||||||    
T  12556221 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaattttgaaacaaatctgtacacaaaaatacatttctgttattcgctgccagc 12556320  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    ||| |||| ||||||||    ||||||| |||||||||||| ||||||||  | || ||||||||||||||||||||  |||||||||||||||  ||||    
T  12556321 gcatcatcgtgccacgaaaaatccagtgacttgcctcaaaa-ctgaaacctccaattgtgccacgttgcccagccattatgccacgatttctgcagaacc 12556419  T
Q  250 tgattttaagttaactctcac 270  Q
    ||||||||| |||||||||||    
T  12556420 tgattttaaattaactctcac 12556440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 97 - 270
Target Start/End: Original strand, 34479799 - 34479971
Alignment:
Q  97 aaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccacgatttttccagtgccttgcctcaaaaactga 195  Q
    ||||| || ||||||||||||||||||| || |||| | || ||  |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |    
T  34479799 aaaatctgtaacaaatctgcacccaaaaatatgttt-tatttttatccgccagcgcaccatcgtgccacgatttttccagtgccttgcctaaaaaact-a 34479896  T
Q  196 aaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    || |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  34479897 aaacctccatcgtgccacgttgcccagccatcgtgccacga-ttctgcagaaacctgattttaagttaactctcac 34479971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 51 - 267
Target Start/End: Complemental strand, 4236610 - 4236374
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||    
T  4236610 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaatacgtttctgtttttccctgccagcg 4236511  T
Q  151 caccatc---------------------atgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgt 229  Q
    |||||||                      |||||||||||||||||||||||||||  ||||||||||||  | ||||||||||||||||||||||||||    
T  4236510 caccatcgtgccacgatgcgatcccattgtgccacgatttttccagtgccttgcct-taaaactgaaacctccaatcgtgccacgttgcccagccatcgt 4236412  T
Q  230 gccacgatttctgc-gaaacctgattttaagttaactct 267  Q
    ||||| | |||||| |||| |||||||||||||||||||    
T  4236411 gccac-aattctgcagaaatctgattttaagttaactct 4236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 60 - 279
Target Start/End: Original strand, 36402635 - 36402853
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||  |||| |||||||||     
T  36402635 tgatataaggtctatatttatagtaaaagtatcgcttaaaattt-gaacaaatctgcacccaaaaatacgtttctgttattcgttgccaacgcaccatcg 36402733  T
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgatttta 257  Q
    ||||||||     |||||| |||||||| ||||||||||||  | ||||||| | |||||||||||||||||||  || |||||| ||||||| ||||||    
T  36402734 tgccacgaaaaaaccagtgacttgcctc-aaaactgaaacctccaatcgtgctatgttgcccagccatcgtgcctaga-ttctgcagaaacctaatttta 36402831  T
Q  258 agttaactctcacgataagaaa 279  Q
    ||||||||||||| || |||||    
T  36402832 agttaactctcacaatgagaaa 36402853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 2818634 - 2818846
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |         
T  2818634 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccgaaaatacgtttttgttattcgctg----- 2818728  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
       ||||| ||||||||    ||||||| |||||||| ||||||||||||  | ||||||||| |||||| |||||||||||||||||||||||  ||||    
T  2818729 ---ccatcgtgccacgaaaaatccagtgacttgcctc-aaaactgaaacctccaatcgtgccatgttgcctagccatcgtgccacgatttctgcagaacc 2818824  T
Q  250 tgattttaag-ttaactctcac 270  Q
    | |||||||| |||||||||||    
T  2818825 taattttaagtttaactctcac 2818846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 134 - 270
Target Start/End: Complemental strand, 659848 - 659714
Alignment:
Q  134 gttattcgccgccagcgcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgcca 233  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||  ||||||||  | |||||||||||||||| |||||||||||||    
T  659848 gttattcgctgccagcgcaccatcgtgccacgatttttccagtgacttgcctcaaa--ctgaaacctccaatcgtgccacgttgcctagccatcgtgcca 659751  T
Q  234 cgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||  |||||||||||||||||||||||||    
T  659750 cgatttctgcagaacctgattttaagttaactctcac 659714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10757295 - 10757180
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  10757295 gactccaatcctaatagtgtttctctctatctcaatctctactctctttcagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 10757196  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  10757195 tctataacaaatctgc 10757180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 60 - 269
Target Start/End: Complemental strand, 6756466 - 6756257
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatca 158  Q
    ||||||||| |||||||| ||||||||||| |  |||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||     
T  6756466 tgatacaagatctatattaatagtaaaagtataacttaaaatttggaataaatctgcaccaaaaaatacgtttctgttattcgctgccagcgcaccatcg 6756367  T
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    ||||||||    ||||||| |||||||||||   |||||||    ||||||||| |||  |||| |||||||||||||||||||   |||||||||||||    
T  6756366 tgccacgaaaaatccagtgacttgcctcaaagt-tgaaacctctaatcgtgccatgttatccaggcatcgtgccacgatttctgtagaacctgattttaa 6756268  T
Q  259 gttaactctca 269  Q
     ||||| ||||    
T  6756267 attaaccctca 6756257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10749818 - 10749704
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||   ||||||||    
T  10749818 gactccaatcctaatagtgtttctctctatctcaatctctactctcttctggtttgctttgatacaaggtctatatttatactaaaagtcctgcttaaaa 10749719  T
Q  101 tttggaacaaatctg 115  Q
    | |  ||||||||||    
T  10749718 tctataacaaatctg 10749704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 34477515 - 34477631
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| ||||| ||    
T  34477515 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacc-tccatcgtgccacgttgcccagccatcgtgccacga-ttctgcagaaacttg 34477612  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  34477613 attttaagttaactctcac 34477631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 31544915 - 31544799
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  31544915 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagctatcgtgccacgattt-tgcagaaacctg 31544818  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  31544817 attttaagttaactctcac 31544799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 60 - 167
Target Start/End: Original strand, 21684768 - 21684876
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| ||||||||| ||||| ||||||||||||||     
T  21684768 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcg 21684867  T
Q  159 tgccacgat 167  Q
    |||||||||    
T  21684868 tgccacgat 21684876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 31542559 - 31542443
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||| |||||| |||||||| ||| ||||||||    
T  31542559 ccatcgtgccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgcccagctatcgtgtcacgattt-tgcagaaacctg 31542462  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  31542461 attttaagttaactctcac 31542443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 60 - 147
Target Start/End: Complemental strand, 21947999 - 21947911
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgcca 147  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||    
T  21947999 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgctgcca 21947911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38960292 - 38960405
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||  |||||||||||  | |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  38960292 gactccaatcctaatagtgtttctctctatctctctctctactctc--caagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 38960389  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  38960390 tctataacaaatctgc 38960405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 16776139 - 16776021
Alignment:
Q  51 agtttgctttgatacaaggtctatattt-atagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccag 148  Q
    ||||||||  |||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| | |||||| ||||||||| ||||  |||||    
T  16776139 agtttgctcagatacaaggtctatattttatagtaaaagtatcgcttaaaatttggaacaaatcttcactcaaaaatatgtttctgtttttcgatgccag 16776040  T
Q  149 cgcaccatcatgccacgat 167  Q
    ||||||||| |||||||||    
T  16776039 cgcaccatcgtgccacgat 16776021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 142 - 270
Target Start/End: Original strand, 38960476 - 38960603
Alignment:
Q  142 ccgccagcgcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttct 241  Q
    |||||| ||||||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| |   |||||||| ||||||||||| || |    
T  38960476 ccgccaacgcaccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcaaagcccagccgtcgtgccacga-ttgt 38960573  T
Q  242 gc-gaaacctgattttaagttaactctcac 270  Q
    || |||||||||||||||||||||||||||    
T  38960574 gcagaaacctgattttaagttaactctcac 38960603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 10749622 - 10749506
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||| ||||||||||| || ||| ||||||||    
T  10749622 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagccgtcgtgccacga-ttgtgcagaaacctg 10749525  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  10749524 attttaagttaactctcac 10749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 51 - 163
Target Start/End: Original strand, 20507760 - 20507873
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||||||  ||||||||||||||| ||| |||||| ||||||||||||||| || |||    
T  20507760 agtttactctgatacaagatctatatttatagtaaaagtatcgcttaaatcttggaacaaatctgctcccaaaaatatgtttctgttattcgctgctagc 20507859  T
Q  150 gcaccatcatgcca 163  Q
    ||||| || |||||    
T  20507860 gcaccttcgtgcca 20507873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15354735 - 15354845
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  15354735 gactccaatcctaatagtgtttctctctatctcaatctctcccaa-----agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 15354829  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  15354830 tctataacaaatctgc 15354845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15357011 - 15357121
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  15357011 gactccaatcctaatagtgtttctctctatctcaatctctcccaa-----agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 15357105  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  15357106 tctataacaaatctgc 15357121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 20504361 - 20504451
Alignment:
Q  179 cttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||||| || |||||  | |||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  20504361 cttgcctcaaaa-ctaaaacctccaatcgtgccacgttgcccagctatcgtgccacgatttctgcagaacctgattttaagttaactctcac 20504451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 171 - 270
Target Start/End: Complemental strand, 21947869 - 21947771
Alignment:
Q  171 tccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||| ||| |||||||| ||||||||  | |||||| ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  21947869 tccagtgacttacctcaaaa-ctgaaacctccaatcgtgtcacgttgcctagccatcgtgccacgatttctgcagaacctgattttaagttaactctcac 21947771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 10757077 - 10756961
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||| |||||| |||| || ||| ||||||||    
T  10757077 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagccgtcgtgctacga-ttgtgcagaaacctg 10756980  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  10756979 attttaagttaactctcac 10756961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 15354948 - 15355064
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  15354948 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 15355045  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  15355046 attttaagttaactctcac 15355064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 15357224 - 15357340
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  15357224 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 15357321  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  15357322 attttaagttaactctcac 15357340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23665162 - 23665054
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  23665162 gactccaatcctaatagtgtttctctctatctcaatctctcaa-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 23665070  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  23665069 tctataacaaatctgc 23665054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23793425 - 23793533
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  23793425 gactccaatcctaatagtgtttctctctatctcaatctctcaa-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 23793517  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  23793518 tctataacaaatctgc 23793533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 18186489 - 18186586
Alignment:
Q  172 ccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||| |||||||||||| ||||||||  | |||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  18186489 ccagtgacttgcctcaaaa-ctgaaacctccaatcgtgccacgttgcccagccatcgtaccacga-ttctgcagaaacttgattttaagttaactctcac 18186586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 31542716 - 31542651
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  31542716 agtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 31542651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 31545061 - 31544996
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  31545061 agtttgctttgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 31544996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3373298 - 3373377
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||| |||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||    
T  3373298 gacttcaatcctaatagtgtttctctctatctcaatctcaa---------agtttgctttgatacaaggtctatatttatagtaaaagt 3373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 21684905 - 21684968
Alignment:
Q  207 gtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  21684905 gtgccacgttgcccagccatcgtgccacga-ttctgcagaaacctgattttaagttaactctcac 21684968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 171 - 270
Target Start/End: Original strand, 20507902 - 20508000
Alignment:
Q  171 tccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||| || |||||||||||| || |||||  | ||||||| |||||||||| | |||||||||||||||||||  |||||||||||||||||||||||||    
T  20507902 tccaatgacttgcctcaaaa-ctaaaacctccaatcgtgctacgttgcccaactatcgtgccacgatttctgcagaacctgattttaagttaactctcac 20508000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 23664951 - 23664835
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||| ||  ||||| | ||| | ||||||||||| ||  |||||||  |||||||||||||  ||| ||||||||    
T  23664951 ccatcgtgccacgatttttccagtgcctttcccaaaaaaataaaaac-tccatcgtgccgcgaagcccagctgtcgtgccacgattg-tgcagaaacctg 23664854  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  23664853 attttaagttaactctcac 23664835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 23667226 - 23667110
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||| ||  ||||| | ||| | ||||||||||| ||  |||||||  |||||||||||||  ||| ||||||||    
T  23667226 ccatcgtgccacgatttttccagtgcctttcccaaaaaaataaaaac-tccatcgtgccgcgaagcccagctgtcgtgccacgattg-tgcagaaacctg 23667129  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  23667128 attttaagttaactctcac 23667110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 23793636 - 23793752
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||| ||  ||||| | ||| | ||||||||||| ||  |||||||  |||||||||||||  ||| ||||||||    
T  23793636 ccatcgtgccacgatttttccagtgcctttcccaaaaaaataaaaac-tccatcgtgccgcgaagcccagctgtcgtgccacgattg-tgcagaaacctg 23793733  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  23793734 attttaagttaactctcac 23793752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 34477379 - 34477435
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||| |||||||||||||| ||||||||||| || |||||||||||    
T  34477379 tgatacaaggtctatttttatagtaaaagtctcgcttaaaatctgtaacaaatctgc 34477435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 661227 - 661285
Alignment:
Q  212 acgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||| ||||||| | |||||||||||||  |||||||||||||||||||||||||    
T  661227 acgttgcctagccatcataccacgatttctgcagaacctgattttaagttaactctcac 661285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 23667434 - 23667329
Alignment:
Q  4 tccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaattt 103  Q
    ||||||||| ||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||| |||||   ||||||||| |    
T  23667434 tccaatccttatagtgtttctttctatctcaatctctcaa-------agtttgctttgatacaaggtctatatttatagttaaagtcatgcttaaaatct 23667342  T
Q  104 ggaacaaatctgc 116  Q
      |||||||||||    
T  23667341 ataacaaatctgc 23667329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 29748313 - 29748260
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatc 113  Q
    |||||||||||||||||||||||||||||  || || |||||||||||||||||    
T  29748313 tgatacaaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatc 29748260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 31179669 - 31179734
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||| |||||||||||||||||||||   ||||||||| |  |||||||||||    
T  31179669 agtttgctttgatacaatgtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 31179734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 34479740 - 34479796
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||| ||||||||||| || ||||||||||| || |||||||||||    
T  34479740 tgatacaaggtctatttttatagtaaaggtctcgcttaaaatctgtaacaaatctgc 34479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23742019 - 23742101
Alignment:
Q  1 gactccaatcctaata-gtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||||||||||| |||| |||||||||||||||||||          |||||||||||| ||||||||||||||||||||||||||    
T  23742019 gactccaatcctaatatgtgtgtctctctatctcaatctctcaa-------agtttgctttgacacaaggtctatatttatagtaaaagt 23742101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 16775964 - 16775898
Alignment:
Q  204 atcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||| |||||||||  ||||||||||||||||| ||||  | |||||||||||||||| ||||||    
T  16775964 atcgtgtcacgttgccttgccatcgtgccacgattcctgcagatcctgattttaagttaattctcac 16775898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 31179837 - 31179897
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacg 214  Q
    ||||| ||||||||||||||||||| ||||||  ||||||| ||| ||||||||||||||||    
T  31179837 ccatcgtgccacgatttttccagtgtcttgcccaaaaaact-aaaacctccatcgtgccacg 31179897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 31179885 - 31179932
Alignment:
Q  223 ccatcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  31179885 ccatcgtgccacgatt-ctgcagaaacctgattttaagttaactctcac 31179932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Original strand, 659869 - 659929
Alignment:
Q  154 catcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgtt 216  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||||  | |||||||||||||    
T  659869 catcgtgccacgatttttccagtgacttgcctc--aaactgaaacctccaatcgtgccacgtt 659929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 2144899 - 2144954
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaa-atttggaacaaatct 114  Q
    |||||||||||||||||||||||||||||| || || ||| | |||||||||||||    
T  2144899 tgatacaaggtctatatttatagtaaaagtatccctcaaataattggaacaaatct 2144954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 4410038 - 4410000
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  4410038 agtttgctctgatacaaggtctatatttatagtgaaagt 4410000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 10529397 - 10529435
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  10529397 agtttgctctgatacaaggtctatatttatagtgaaagt 10529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 812 - 846
Target Start/End: Complemental strand, 14394652 - 14394618
Alignment:
Q  812 ttagcgggagtggttatggtgcataaggaaatcct 846  Q
    |||| ||||||||||||||||||||||||||||||    
T  14394652 ttagggggagtggttatggtgcataaggaaatcct 14394618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 39854465 - 39854427
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  39854465 agtttgctctgatacaaggtctatatttatagtgaaagt 39854427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 3883922 - 3883951
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  3883922 gggagtggttatggtgcataaggaaatcct 3883951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 10586811 - 10586782
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  10586811 tgatacaaggtctatatttatagtaaaagt 10586782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 13553162 - 13553133
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  13553162 gggagtggttatggtgcataaggaaatcct 13553133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 14940243 - 14940272
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  14940243 gggagtggttatggtgcataaggaaatcct 14940272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 15552207 - 15552178
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  15552207 tgatacaaggtctatatttatagtaaaagt 15552178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 18468979 - 18468950
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  18468979 tgatacaaggtctatatttatagtaaaagt 18468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 917 - 954
Target Start/End: Original strand, 19832214 - 19832251
Alignment:
Q  917 atctatacctattaataaagacaatactttcttttggt 954  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  19832214 atctatacctattaataaaggcaatacttttttttggt 19832251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 813 - 846
Target Start/End: Complemental strand, 23948634 - 23948601
Alignment:
Q  813 tagcgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||| |||||||    
T  23948634 tagcgggagtggttatggtgcataagaaaatcct 23948601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 25803988 - 25803959
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  25803988 tgatacaaggtctatatttatagtaaaagt 25803959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 26637724 - 26637753
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  26637724 gggagtggttatggtgcataaggaaatcct 26637753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 27910417 - 27910388
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  27910417 tgatacaaggtctatatttatagtaaaagt 27910388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 27912502 - 27912473
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  27912502 tgatacaaggtctatatttatagtaaaagt 27912473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 31544997 - 31544932
Alignment:
Q  93 gcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatc 157  Q
    ||||||||| || || |||||||||||||||| || ||||||||| ||  ||||||||||||||||    
T  31544997 gcttaaaatctgtaataaatctgcacccaaaaatatgtttctgtttttatccgccagcgcaccatc 31544932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 37456859 - 37456830
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  37456859 gggagtggttatggtgcataaggaaatcct 37456830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 8e-70; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 49 - 270
Target Start/End: Original strand, 43623864 - 43624084
Alignment:
Q  49 ccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccag 148  Q
    ||||||| || ||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  43623864 ccagtttactctgatacaaggtctatttttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaatacgtttatgttatttgctgccag 43623963  T
Q  149 cgcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaa 247  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||||||  | ||||||||| |||||||||||||||||||| || |||||| ||||    
T  43623964 cgcaccatcgtgccacgattttttcagtgccttgcctc-aaaactgaaacctccaatcgtgccatgttgcccagccatcgtgccatga-ttctgcagaaa 43624061  T
Q  248 cctgattttaagttaactctcac 270  Q
    |||||||||||||||||| ||||    
T  43624062 cctgattttaagttaactttcac 43624084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 60 - 266
Target Start/End: Original strand, 6264452 - 6264658
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |  ||||||||     
T  6264452 tgatacaaggtctatatttatagtaaaaatatcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgccgctaatgcaccatcg 6264551  T
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    ||||||||||||||||||| |||||||| |||||||||||   | ||| |||||||||||||| ||||||||| || ||||||||  |||||||||||||    
T  6264552 tgccacgatttttccagtgacttgcctc-aaaactgaaacatccaatcatgccacgttgcccaaccatcgtgcaacaatttctgcagaacctgattttaa 6264650  T
Q  259 gttaactc 266  Q
    ||||||||    
T  6264651 gttaactc 6264658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 40032356 - 40032585
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  40032356 agtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaacttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagc 40032455  T
Q  150 gca----------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgattt 239  Q
    |||          ||||| ||||||||    ||||||| |||| ||| ||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  40032456 gcaccatcgtatcccatcgtgccacgaaaaatccagtgacttgtctc-aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgattt 40032554  T
Q  240 ctgcgaaacctgattttaagttaactctcac 270  Q
    ||||  |||||||||||||||||||||||||    
T  40032555 ctgcagaacctgattttaagttaactctcac 40032585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 24162510 - 24162751
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||| ||||||    
T  24162510 agtttgctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttgaaacaaatctgcacccaaaaatacgtttctaatattcgcagccagc 24162609  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatc 227  Q
    |||                     ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||     
T  24162610 gcacaatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaaactgaaa-cctccatcgtgccacgttgcccaaccatt 24162708  T
Q  228 gtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||    
T  24162709 gtgccacga-ttctgcagaaacttgattttaagttaactctcac 24162751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 19502309 - 19502549
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc-acccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||| |||||| |||||||||||||| |||||||    
T  19502309 agtttgctctgatacaaggtctatatttatagtaaaattttcccttaaaatttggatcaaatctgcaaccaaaaatatgtttctgttattcgtcgccagc 19502408  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  |||||||    
T  19502409 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctaaaaaactgaaa-cctccatcgtgccacgttgccttgccatcg 19502507  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||| |||||| |||||||||||||||||||||| ||||    
T  19502508 tgccacga-ttctgcagaaacctgattttaagttaactatcac 19502549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 60 - 275
Target Start/End: Original strand, 18800609 - 18800823
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||   |||||| ||||||||| |||||| | |||||||||||     
T  18800609 tgatacaaggtctatatttatagtaaaagtatcgtttaaaatttggaacaaatctgcacttaaaaatatgtttctgtt-ttcgcctctagcgcaccatcg 18800707  T
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    |||||| |||||||||||| ||||| || | |||||||||   | |||||| ||||||||||| | | ||||||||||||||| |  ||| |||||||||    
T  18800708 tgccacaatttttccagtgacttgcttc-ataactgaaacatccaatcgtgtcacgttgcccaacaaacgtgccacgatttctccagaacatgattttaa 18800806  T
Q  259 gttaactctcacgataa 275  Q
    |||||||||||| ||||    
T  18800807 gttaactctcacaataa 18800823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 60 - 270
Target Start/End: Original strand, 21521002 - 21521233
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||     
T  21521002 tgatacaaggtttatatttatagtaaaagtatcgcttaaattttggaacaaatctgcacccaaaaatacgtttatgttattcgctgccagcgcaccatcg 21521101  T
Q  159 tgc---------------------cacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgat 237  Q
    |||                     |||||||||||||||| ||||| || ||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  21521102 tgccacgttgcgatcccatcgtggcacgatttttccagtggcttgcttc-aaaactgaaacctccaatcgtgccacgttgcccagccatcgtgccacgat 21521200  T
Q  238 ttctgcgaaacctgattttaagttaactctcac 270  Q
    | |||   |||||||||||||||||||||||||    
T  21521201 tcctgtagaacctgattttaagttaactctcac 21521233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 51 - 267
Target Start/End: Complemental strand, 27104756 - 27104519
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| |||| ||| | ||||||    
T  27104756 agttttctctgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcactcaaaaatatgtttatgtttttccctgccagc 27104657  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||||    
T  27104656 gcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgccttgcctcaaaaactgaaa-cctccatcgtgccacgttgcccttcaatcg 27104558  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactct 267  Q
    |||||||| |||||| |||| |||||||||||||||||||    
T  27104557 tgccacga-ttctgcagaaatctgattttaagttaactct 27104519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 19504643 - 19504883
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||  |||||||||||||| |||||||    
T  19504643 agtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacctaaaaatgtgtttctgttattcgtcgccagc 19504742  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||                     ||||| ||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||  |||||||    
T  19504743 gcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcct-aaaaaattaaaacctccatcgtgccacgttgccttgccatcg 19504841  T
Q  229 tgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    ||||| || |||||| |||||||||||||||||||||| ||||    
T  19504842 tgccatga-ttctgctgaaacctgattttaagttaactttcac 19504883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 62 - 268
Target Start/End: Original strand, 6259124 - 6259351
Alignment:
Q  62 atacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgca-------- 152  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||||            
T  6259124 atacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaagtctgcacccaaaaatatgtttctgttattcaccgccagcgcaccatcgtg 6259223  T
Q  153 -------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgattt 239  Q
                 ||||| ||||||||||||||||||| ||| |||| |||||||||||   | || |||||||||||| ||||||||||||||||||||    
T  6259224 tcacgttgcgatcccatcgtgccacgatttttccagtgactttcctc-aaaactgaaacatccaatagtgccacgttgcacagccatcgtgccacgattt 6259322  T
Q  240 ctgcgaaacctgattttaagttaactctc 268  Q
    ||||  |||||||||||||||||||||||    
T  6259323 ctgcagaacctgattttaagttaactctc 6259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 13910342 - 13910456
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  13910342 agtttgctctgatacaaggtctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 13910441  T
Q  150 gcaccatcatgccac 164  Q
    |||||||| ||||||    
T  13910442 gcaccatcgtgccac 13910456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 42064472 - 42064355
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||| ||||||||| ||||| ||||||    
T  42064472 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactaaaaaatatgtttctgtttttcgctgccagc 42064373  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  42064372 gcaccatcgtgccacgat 42064355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 50 - 165
Target Start/End: Original strand, 22407706 - 22407822
Alignment:
Q  50 cagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccag 148  Q
    |||||| || |||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||     
T  22407706 cagtttactctgatacaaggtctatatttatagtaaaagtattgcttaaaattttgaacaaatctgcacccaaaaatacgtttctgttattcgctgccaa 22407805  T
Q  149 cgcaccatcatgccacg 165  Q
    ||||||||| |||||||    
T  22407806 cgcaccatcgtgccacg 22407822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 45332342 - 45332439
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  45332342 gactccaatcctaatagtgtttctctctatctcaatctctactctc--caagtttgctttgatacaaggtctatatttatagtaaaagttctgcttaaaa 45332439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36559025 - 36559138
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  36559025 gactccaatcctaatagtgtttctttctatctcaatctctactctc--caagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 36559122  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  36559123 tctataacaaatctgc 36559138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36561302 - 36561415
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  36561302 gactccaatcctaatagtgtttctttctatctcaatctctactctc--caagtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 36561399  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  36561400 tctataacaaatctgc 36561415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 22287634 - 22287749
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaa-atacgtttctgttattcgccgccagc 149  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| ||| |||||||||| ||||||    
T  22287634 agtttactttaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaacatacatttttgttattcgctgccagc 22287733  T
Q  150 gcaccatcatgccacg 165  Q
    |||||||  |||||||    
T  22287734 gcaccatggtgccacg 22287749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 36559241 - 36559357
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||| ||||||||||| || ||| ||||||||    
T  36559241 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagccgtcgtgccacga-ttgtgcagaaacctg 36559338  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  36559339 attttaagttaactctcac 36559357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 36561560 - 36561676
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| |||||||||||||  |  |||||||| ||||||||||| || ||| ||||||||    
T  36561560 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgtgaagcccagccgtcgtgccacga-ttgtgcagaaacctg 36561657  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  36561658 attttaagttaactctcac 36561676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 161 - 270
Target Start/End: Original strand, 45332566 - 45332674
Alignment:
Q  161 ccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaag 259  Q
    |||||||||||||||| |||||||  ||||||| ||||| ||||||||||| ||  |||||||| ||||||||||||| |||| ||||||||||||||||    
T  45332566 ccacgatttttccagttccttgcccaaaaaactaaaacc-tccatcgtgccgcgaagcccagccgtcgtgccacgatt-ctgcagaaacctgattttaag 45332663  T
Q  260 ttaactctcac 270  Q
    |||||||||||    
T  45332664 ttaactctcac 45332674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 42064342 - 42064232
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctcca-tcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgatttta 257  Q
    |||||||||||||||||||| ||||||||||  ||  || |||||| |||| |||||||||||||| |||||||||||||| ||||  | | ||||||||    
T  42064342 tgccacgatttttccagtgctttgcctcaaa--cttgaaacctccagtcgtaccacgttgcccagcaatcgtgccacgattcctgcagatcttgatttta 42064245  T
Q  258 agttaactctcac 270  Q
    |||||||||||||    
T  42064244 agttaactctcac 42064232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 35107248 - 35107152
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgca-cccaaaatacgtttctgttattcgccgccagcgcacca 155  Q
    |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||    |||||||| || |||||||||||  ||||||||||    
T  35107248 tgatacaatgtctatatttatagtaaaagtatcccttaaaatttggaacaaatctgcattgaaaaatacgattatgttattcgccttcagcgcacca 35107152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 28462593 - 28462666
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttct 133  Q
    ||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||  |||||| ||||||    
T  28462593 tgatacaaggtttatatttatagtaaaagtaacccttaaaatttggaacaaatctgcactgaaaatatgtttct 28462666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 45157001 - 45156946
Alignment:
Q  58 tttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatc 113  Q
    ||||||| |||||||||||||||||||||||  || || |||||||||||||||||    
T  45157001 tttgatataaggtctatatttatagtaaaagcatccctcaaaatttggaacaaatc 45156946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 35028527 - 35028473
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatct 114  Q
    |||||||| ||||||||||||||||||||| || || |||| |||||||||||||    
T  35028527 tgatacaatgtctatatttatagtaaaagtatccctaaaaaattggaacaaatct 35028473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 37171051 - 37171156
Alignment:
Q  60 tgatacaaggtctatatttatagta-aaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    ||||||||||| ||||||||||||  |||||  | |||||||| |||||||||||| |||  ||||||||||| |||||||  ||  ||||||||||||     
T  37171051 tgatacaaggtttatatttatagtggaaagtaacccttaaaatatggaacaaatcttcactgaaaatacgtttttgttatt-tccttcagcgcaccatcg 37171149  T
Q  159 tgccacg 165  Q
    |||||||    
T  37171150 tgccacg 37171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 20146906 - 20146941
Alignment:
Q  52 gtttgctttgatacaaggtctatatttatagtaaaa 87  Q
    |||| |||||||||||||||||||||||||||||||    
T  20146906 gtttactttgatacaaggtctatatttatagtaaaa 20146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 20147047 - 20147082
Alignment:
Q  52 gtttgctttgatacaaggtctatatttatagtaaaa 87  Q
    |||| |||||||||||||||||||||||||||||||    
T  20147047 gtttactttgatacaaggtctatatttatagtaaaa 20147082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 875 - 918
Target Start/End: Complemental strand, 31711674 - 31711631
Alignment:
Q  875 tccaaaatcattagatgtatttaatgatttacagcactctgcat 918  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||    
T  31711674 tccaaaaccattagatgtatttaatggtttccagcactctgcat 31711631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 1292065 - 1292095
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  1292065 cgggagtggttatggtgcataaggaaatcct 1292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 7487141 - 7487170
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  7487141 gggagtggttatggtgcataaggaaatcct 7487170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 17897549 - 17897578
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  17897549 tgatacaaggtctatatttatagtaaaagt 17897578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 23452548 - 23452577
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  23452548 tgatacaaggtctatatttatagtaaaagt 23452577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 917 - 954
Target Start/End: Complemental strand, 23463793 - 23463756
Alignment:
Q  917 atctatacctattaataaagacaatactttcttttggt 954  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  23463793 atctatacctattaataaaggcaatactttgttttggt 23463756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 35215903 - 35215932
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  35215903 tgatacaaggtctatatttatagtaaaagt 35215932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 39355214 - 39355185
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  39355214 gggagtggttatggtgcataaggaaatcct 39355185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 41345082 - 41345111
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  41345082 gggagtggttatggtgcataaggaaatcct 41345111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 2e-61; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 4424055 - 4423836
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| || ||||| ||||||    
T  4424055 agtttgctctgatacaaggtctgtatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttctatttttcgctgccagc 4423956  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    |||||||| |||||||||||||||||||||||||||  ||||||||||||  | || ||||||||||||||||| || ||||||||||| ||||  | |     
T  4423955 gcaccatcgtgccacgatttttccagtgccttgcct-taaaactgaaacctccaattgtgccacgttgcccagcaattgtgccacgattcctgcagatct 4423857  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  4423856 tgattttaagttaactctcac 4423836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 51 - 238
Target Start/End: Original strand, 3886216 - 3886407
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc----aaaatacgtttctgttattcgccgcc 146  Q
    |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||    |||||| ||||||||||||||| |||    
T  3886216 agtttgctctgatacaaagtctatatttatagtaaaagtatcgcttaaaatttggaacaaatatgcacccaaaaaaaatatgtttctgttattcgctgcc 3886315  T
Q  147 agcgcaccatcatgccacgatttttccagtgccttgcctc-aaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatt 238  Q
    ||| ||||||| | ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||| || |||||||    
T  3886316 agcacaccatcgtaccacgatttttccagtgtcttgcctcaaaaaactgaaa-cctccatcgtgccacgttgtccagccatcatgtcacgatt 3886407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 27827023 - 27826783
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||| |||| ||||| ||||||    
T  27827023 agtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttttgtttttcgctgccagc 27826924  T
Q  150 gcaccatcatgccacgat---------------------ttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||||||| |||||||||                     ||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||| ||||    
T  27826923 gcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgctttgcttcaaaaaatgaaacc-tccatcgtgccacgttgcccagcaatcg 27826825  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||  | |||||||||||||||||||||||    
T  27826824 tgccacgattcctgcagatcctgattttaagttaactctcac 27826783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 27829334 - 27829094
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||| |||| ||||| ||||||    
T  27829334 agtttgctctgatacaaggcctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatatgtttttgtttttcgctgccagc 27829235  T
Q  150 gcaccatcatgccacgat---------------------ttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    |||||||| |||||||||                     ||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  27829234 gcaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtgttttgcctcaaaaaatgaaacc-tccatcgtgccacgttgcccagcaatcg 27829136  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||  | |||||||||||||||||||||||    
T  27829135 tgccacgattcctgcagatcctgattttaagttaactctcac 27829094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 60 - 270
Target Start/End: Complemental strand, 15072738 - 15072507
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  15072738 tgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatttgcacccaaaaatacgtttctgttattcgctgccagcgcaccatca 15072639  T
Q  159 tgc---------------------cacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgat 237  Q
    |||                     ||||||||||| |||| ||||| || ||||||||||||  | |||||| |||||||||||||||||||| ||||||    
T  15072638 tgccacgttgcgatcccatcgtgacacgatttttctagtggcttgcttc-aaaactgaaacctccaatcgtgtcacgttgcccagccatcgtgtcacgat 15072540  T
Q  238 ttctgcgaaacctgattttaagttaactctcac 270  Q
    | ||||  || ||||||||||||||||||||||    
T  15072539 tcctgcagaatctgattttaagttaactctcac 15072507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 59 - 270
Target Start/End: Complemental strand, 15068010 - 15067778
Alignment:
Q  59 ttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatc 157  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  15068010 ttgatacaaggtttatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatacgtttttgttattcgctgccagcgcaccatc 15067911  T
Q  158 atgccac---------------------gatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacga 236  Q
     ||||||                     ||||||||||||| ||||| || ||||||||||||  | ||||||||| |||||||||||||| ||||||||    
T  15067910 gtgccacgttgcgatcccatcgtggcatgatttttccagtggcttgcttc-aaaactgaaacctccaatcgtgccatgttgcccagccatcttgccacga 15067812  T
Q  237 tttctgcgaaacctgattttaagttaactctcac 270  Q
    || |||| ||| |||||||||||||||| |||||    
T  15067811 ttcctgcaaaatctgattttaagttaacactcac 15067778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 14807788 - 14807672
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||||    
T  14807788 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaatacgtttatgtttttcgctgccagcg 14807689  T
Q  151 caccatcatgccacgat 167  Q
    ||||| | |||||||||    
T  14807688 caccaccgtgccacgat 14807672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 28251865 - 28251981
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||    
T  28251865 agtttactatgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcactcaaaatacgtttctgtttttcgctgccaacg 28251964  T
Q  151 caccatcatgccacgat 167  Q
    ||||||| | |||||||    
T  28251965 caccatcgtaccacgat 28251981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 18812785 - 18812669
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctga 252  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||| |||||||||||||  |  |||||||||    
T  18812785 ccatcgtgccacgatttttccagtgccttgcctaaaaaactaaaacc-tccatcgtgccacgttgcccagccgtcgtgccacgattcttcagaaacctga 18812687  T
Q  253 ttttaagttaactctcac 270  Q
    ||||||||||||||||||    
T  18812686 ttttaagttaactctcac 18812669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 2468396 - 2468511
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||||||||||||||  |||||    
T  2468396 agtttactttgatacaaggtctatatttatagtaaaagtatcgcttaacatttggaacaaatctgcactaaaaaatacgtttctgttattcgcatccagc 2468495  T
Q  150 gcaccatcatgccacg 165  Q
    |||||||| |||||||    
T  2468496 gcaccatcgtgccacg 2468511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 12517324 - 12517564
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||| | |||||| ||||||||| ||||| ||||||    
T  12517324 agtttgctctgatacaaggtatatatatatagtaaaagtatcgcttaaaatttggaacaaatttgcactcaaaaatatgtttctgtttttcgctgccagc 12517423  T
Q  150 gca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
     ||                     ||||| |||||||||||||||||| | ||||||| ||||||||||||  | ||||||||||||||||  |||||||    
T  12517424 acaccatcgtgccacgatgcgatcccatcgtgccacgatttttccagtacattgcctc-aaaactgaaacctccaatcgtgccacgttgccttgccatcg 12517522  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||  | |||||||||||||||||||||||    
T  12517523 tgccacgattcctgcagatcctgattttaagttaactctcac 12517564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 18810600 - 18810484
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| |||| | |||||||||||||||||||| ||||| | ||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  18810600 ccatcgtgccgcaatttttccagtgccttgcctaaaaaaataaaacc-tccatcgtgccacgttgcccagccgtcgtgccacga-ttctgcagaaacctg 18810503  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  18810502 attttaagttaactctcac 18810484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 43079456 - 43079348
Alignment:
Q  161 ccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaag 259  Q
    ||||||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||  ||| ||||||||||| |||||| ||||||||||||||||    
T  43079456 ccacgatttttccagtgccttgcccaaaaaactaaaacc-tccatcgtgccacgttgccttgccgtcgtgccacga-ttctgcagaaacctgattttaag 43079359  T
Q  260 ttaactctcac 270  Q
    |||||||||||    
T  43079358 ttaactctcac 43079348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 43081839 - 43081723
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||| |||||  ||| ||||||||||| |||||| ||||||||    
T  43081839 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccactttgccttgccgtcgtgccacga-ttctgcagaaacctg 43081742  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  43081741 attttaagttaactctcac 43081723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 28252009 - 28252122
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctga 252  Q
    ||||| |||||||||||||||||||| ||||||||||   |||||||  | ||||| |||||||||| |||||||||||||||||| ||||  | |||||    
T  28252009 ccatcgtgccacgatttttccagtgctttgcctcaaact-tgaaacctccaatcgtaccacgttgcctagccatcgtgccacgattcctgcagatcctga 28252107  T
Q  253 ttttaagttaactct 267  Q
    |||||||||||||||    
T  28252108 ttttaagttaactct 28252122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 14807659 - 14807552
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgatttta 257  Q
    |||||||||||||||||||| ||||||| |||  |||||||  | |||||| ||||||||||| ||||| |||||||| |||||| ||||||||||||||    
T  14807659 tgccacgatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgtcacgttgcccaaccatcatgccacga-ttctgcagaaacctgatttta 14807562  T
Q  258 agttaactct 267  Q
    ||||||||||    
T  14807561 agttaactct 14807552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 18810745 - 18810680
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18810745 agtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgc 18810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 18812930 - 18812865
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18812930 agtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttgtaacaaatctgc 18812865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 44720735 - 44720618
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc--gaaacct 250  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||  | | ||||||||  |||||||| ||| |||||||| ||||||   ||||||    
T  44720735 ccatcgtgccacgatttttccagtaccttgcctc-aaaactgaaacctccaaacgtgccacaatgcccagcaatcatgccacga-ttctgcagaaaacct 44720638  T
Q  251 gattttaagttaactctcac 270  Q
    ||||||||||||||||||||    
T  44720637 gattttaagttaactctcac 44720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 44720880 - 44720815
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  44720880 agtttgctttgatataaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 44720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 17847556 - 17847501
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctg 115  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||||||||    
T  17847556 tgatacaaggtctatatttatagtaaaagtatccctcaaaatttggaacaaatctg 17847501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 44720816 - 44720742
Alignment:
Q  93 gcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatcatgccacgat 167  Q
    ||||||||| || ||||||||||||||| |||||| ||||||||| || || |||||||||||||| |||||||||    
T  44720816 gcttaaaatctgtaacaaatctgcacccaaaaatatgtttctgtt-tttgctgccagcgcaccatcgtgccacgat 44720742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 43530161 - 43530123
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  43530161 agtttgctctgatacaaggtctatatttatagtaaaagt 43530123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 31035095 - 31035032
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa 124  Q
    |||||||||||||||||||||||||||| | || || |||| ||||||||||||||  |||||||    
T  31035095 tgatacaaggtctatatttatagtaaaaatatc-ctaaaaaattggaacaaatctgagcccaaaa 31035032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 43079614 - 43079558
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  43079614 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 43081986 - 43081930
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    ||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  43081986 tgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 43081930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 31162241 - 31162186
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgctta-aaatttggaacaaatct 114  Q
    |||||||||||||||||||||||||||||| || || | ||| |||||||||||||    
T  31162241 tgatacaaggtctatatttatagtaaaagtatccctcataaaattggaacaaatct 31162186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 10237534 - 10237504
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  10237534 cgggagtggttatggtgcataaggaaatcct 10237504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 15227210 - 15227180
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  15227210 cgggagtggttatggtgcataaggaaatcct 15227180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 22684964 - 22685002
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  22684964 agtttgctctgatacaaggtctatatttatagtgaaagt 22685002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 877 - 918
Target Start/End: Complemental strand, 186054 - 186013
Alignment:
Q  877 caaaatcattagatgtatttaatgatttacagcactctgcat 918  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  186054 caaaatcattagatgtatttaatggttttcagcaccctgcat 186013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 1149910 - 1149939
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  1149910 gggagtggttatggtgcataaggaaatcct 1149939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 6376017 - 6375988
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  6376017 tgatacaaggtctatatttatagtaaaagt 6375988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 15809243 - 15809214
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  15809243 tgatacaaggtctatatttatagtaaaagt 15809214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 24873494 - 24873523
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  24873494 tgatacaaggtctatatttatagtaaaagt 24873523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 28283532 - 28283561
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  28283532 tgatacaaggtctatatttatagtaaaagt 28283561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 31574054 - 31574100
Alignment:
Q  63 tacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaa 111  Q
    ||||||||||||||||||||||||||  || || |||||||||||||||    
T  31574054 tacaaggtctatatttatagtaaaag--tctctcaaaatttggaacaaa 31574100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 32339333 - 32339304
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  32339333 tgatacaaggtctatatttatagtaaaagt 32339304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 34633208 - 34633237
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  34633208 gggagtggttatggtgcataaggaaatcct 34633237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 35301624 - 35301653
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  35301624 gggagtggttatggtgcataaggaaatcct 35301653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 118; Significance: 1e-59; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 51 - 267
Target Start/End: Original strand, 73325 - 73540
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    ||||| |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||     
T  73325 agtttcctttgatacacggtctatatttatagtaaaagtatctcttaaaatttggaacaaatctgcacccaaaatatgtttctgtttttcgctgccagca 73424  T
Q  151 caccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacc 249  Q
    ||||||| |||||| ||||||||||||| ||||||| |||  |||||||  | |||||||||||||||| |||||||||||||||| ||||||  ||| |    
T  73425 caccatcgtgccacaatttttccagtgctttgcctc-aaacttgaaacctccaatcgtgccacgttgcctagccatcgtgccacga-ttctgcataaatc 73522  T
Q  250 tgattttaagttaactct 267  Q
    ||||||||||||||||||    
T  73523 tgattttaagttaactct 73540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 69593 - 69709
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagcg 150  Q
    |||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||     
T  69593 agtttgctctgatataaggtctatatttattgtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaatatgtttctgtttttcgctgccagca 69692  T
Q  151 caccatcatgccacgat 167  Q
    ||||||| ||| |||||    
T  69693 caccatcgtgcaacgat 69709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 69726 - 69829
Alignment:
Q  163 acgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagtt 261  Q
    |||||||||||||||| ||||||||||   |||||||  | |||||||||||||||| |||||||||||||||| |||||| |||| |||||||||||||    
T  69726 acgatttttccagtgctttgcctcaaact-tgaaacctccaatcgtgccacgttgcctagccatcgtgccacga-ttctgcagaaatctgattttaagtt 69823  T
Q  262 aactct 267  Q
    ||||||    
T  69824 aactct 69829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 1e-56; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 823 - 994
Target Start/End: Original strand, 7367781 - 7367961
Alignment:
Q  823 ggttatggtgcataaggaaatcctaaataaattcaaggacaaaatatctatttccaaaatcattagatgtatttaatgatttacagcactctgcatctat 922  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||    
T  7367781 ggttatggtgcataaggaaatcctaaataaattcaaggacaaaatatatatttccaaaaccattagatgtatttaatggtttccagcaccctgcatctat 7367880  T
Q  923 acctattaataaagacaatactttcttttg---------gttttctttcctattttacctctagttaattgcaaatattcc 994  Q
    |||||||||||||| |||||||||||||||          ||||||||||||||||||| ||| |||||||||||||||||    
T  7367881 acctattaataaaggcaatactttcttttgttgtagcctattttctttcctattttacccctaattaattgcaaatattcc 7367961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 1072175 - 1072394
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||  |    
T  1072175 agtttactctgatacaatgtctatatttatagtaaaagtattgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgcctac 1072274  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    | |||||| ||||||||    |||| || |||||||| |||||| |||||  | |||||||||||||||||| ||||||| |||||||||||||  ||||    
T  1072275 gtaccatcgtgccacgaaaaatccaatgacttgcctc-aaaacttaaacctccaatcgtgccacgttgcccaaccatcgtaccacgatttctgcagaacc 1072373  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  1072374 tgattttaagttaactctcac 1072394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 50 - 270
Target Start/End: Complemental strand, 8995496 - 8995256
Alignment:
Q  50 cagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||    
T  8995496 cagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttatttgctgtcagc 8995397  T
Q  150 gcac---------------------catcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    ||||                     |||| |||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||    
T  8995396 gcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcc-caaaaactgaaacctccaatcgtgccacgttgcccagccatcg 8995298  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| || |  | |||||||||||||||||||||||    
T  8995297 tgccacgattcctacagatcctgattttaagttaactctcac 8995256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 50 - 270
Target Start/End: Complemental strand, 9019943 - 9019703
Alignment:
Q  50 cagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||| || ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||    
T  9019943 cagtttactctgatacaagatctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaatacgtttctgttatttgctgtcagc 9019844  T
Q  150 gcac---------------------catcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcg 228  Q
    ||||                     |||| |||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||    
T  9019843 gcaccatcgtgccacgatgtgaccccatcgtgccacgatttttccagtgccttgcc-caaaaactgaaacctccaatcgtgccacgttgcccagccatcg 9019745  T
Q  229 tgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| || |  | |||||||||||||||||||||||    
T  9019744 tgccacgattcctacagatcctgattttaagttaactctcac 9019703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 51 - 270
Target Start/End: Complemental strand, 32280013 - 32279795
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    ||||| || ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||| |||||||||||||||||    
T  32280013 agtttactatgatacaaggtctatatatataggaaaagtatcgcttaaaatttggaacaaatctgcactcaaaaatacatttatgttattcgccgccagc 32279914  T
Q  150 gcaccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacc 249  Q
    |||||||| |||||||| |||||||| | |||||||| | |||||||||   | |||||||||||||||||| | |||||| |||| || |||| | | |    
T  32279913 gcaccatcgtgccacgacttttccagcgacttgcctc-agaactgaaacatccaatcgtgccacgttgcccaacaatcgtgtcacgtttcctgc-agaac 32279816  T
Q  250 tgattttaagttaactctcac 270  Q
    |||||||||||||||||||||    
T  32279815 tgattttaagttaactctcac 32279795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 19227706 - 19227947
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc--aaaatacgtttctgttattcgccgccag 148  Q
    |||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  19227706 agtttgctctgatacaagatctatatttatagtaaaagtttcccttaaaatttggaacaaatctgcacccaaaaaatatgtttctgttattcgccgccag 19227805  T
Q  149 cgca---------------------ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatc 227  Q
    ||||                     ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||    
T  19227806 cgcaccatcgtgccacgatgcgaccccatcgtgccacgatttttccagtgccttgcctcaaaaattgaaa-cctccatcatgccacgttgcccaaccatc 19227904  T
Q  228 gtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    ||||||||||| ||||  | | | |||||||||||||||||||    
T  19227905 gtgccacgattcctgcagatcttaattttaagttaactctcac 19227947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 51 - 270
Target Start/End: Original strand, 14507473 - 14507715
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | |||||| ||||||||| ||||| | ||||    
T  14507473 agtttgctctaatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctacactcaaaaatatgtttctgtttttcgctggcagc 14507572  T
Q  150 gcaccatcatgccacg---------------------atttttccagtgccttgcctc--aaaaactgaaaccctccatcgtgccacgttgcccagccat 226  Q
    |||||||| |||||||                     |||||||||||||||||  ||  ||||||||||| ||||||||||||||||||||||||||||    
T  14507573 gcaccatcgtgccacgatgcgaccccatcgtgccaccatttttccagtgccttgtatcaaaaaaactgaaa-cctccatcgtgccacgttgcccagccat 14507671  T
Q  227 cgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||    
T  14507672 cgtgccacga-ttctgcagaaatctgattttaagttaactctcac 14507715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 11983327 - 11983444
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||| ||||||||| ||||| ||||||    
T  11983327 agtttgctctgatacaaggtctatatttatagtaaaagtttcgtttaaaatttgaaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagc 11983426  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  11983427 gcaccatcgtgccacgat 11983444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 30729135 - 30729241
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||     
T  30729135 tgatacaagatctatatttatagtaaaagtaccgcttaaaatttggaacaaatctgcacccaaaaatacgtttctgttattcgctgccagcgcactatcg 30729234  T
Q  159 tgccacg 165  Q
    |||||||    
T  30729235 tgccacg 30729241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 15530418 - 15530537
Alignment:
Q  49 ccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgcca 147  Q
    ||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||| |||||| | |||| | ||||    
T  15530418 ccagtttactctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaacctgcacccaaaaatatgtttctataattcactgcca 15530517  T
Q  148 gcgcaccatcatgccacgat 167  Q
    || ||||||| |||||||||    
T  15530518 gcacaccatcgtgccacgat 15530537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 33308802 - 33308686
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||  |||||||| ||||||||||| |||||| ||||||||    
T  33308802 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccacgaagcccagccgtcgtgccacga-ttctgcagaaacctg 33308705  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  33308704 attttaagttaactctcac 33308686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 33311071 - 33310955
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||  |||||||| ||||||||||| |||||| ||||||||    
T  33311071 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccacgaagcccagccgtcgtgccacga-ttctgcagaaacctg 33310974  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  33310973 attttaagttaactctcac 33310955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 15541447 - 15541553
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||  |||||| ||||||| ||||||| ||||||| ||||||     
T  15541447 tgatacaaggtctatatttatagtaaaagtgtaacttaaaatttggaacaaatctgcacctaaaaatatgtttctgctattcgctgccagcgtaccatcg 15541546  T
Q  159 tgccacg 165  Q
    |||||||    
T  15541547 tgccacg 15541553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 26068765 - 26068881
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| |||||||| ||||||||||||  ||| ||||||||||| |||||| ||||||||    
T  26068765 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcatgccacgttgccttgccgtcgtgccacga-ttctgcagaaacctg 26068862  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  26068863 attttaagttaactctcac 26068881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26068556 - 26068662
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  26068556 gactccaatcctaatagtgtttctctctatctcaatctcaa---------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 26068646  T
Q  101 tttggaacaaatctgc 116  Q
    | || |||||||||||    
T  26068647 tctgtaacaaatctgc 26068662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 26066494 - 26066610
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  || |||| ||| |||||||||||||||||||||  ||| ||||||||||| |||| | ||||||||    
T  26066494 ccatcgtgccacgatttttccagtgccttgcccaaataact-aaaacctccatcgtgccacgttgccttgccgtcgtgccacga-ttctacagaaacctg 26066591  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  26066592 attttaagttaactctcac 26066610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 29755162 - 29755278
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||| ||||||||||| || ||| ||||||||    
T  29755162 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagccgtcgtgccacga-ttgtgcagaaacctg 29755259  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  29755260 attttaagttaactctcac 29755278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26066285 - 26066389
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  26066285 gactccaatcctaatagtgtttctctctatctcaatctcaa---------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 26066375  T
Q  101 tttggaacaaatct 114  Q
    | || |||||||||    
T  26066376 tctgtaacaaatct 26066389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 15532988 - 15533085
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacc-caaaatacgtttctgttattcgccgccagcgcaccat 156  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||  |||||| |||||| ||||| ||  ||||||||||||    
T  15532988 tgatacaaggtctatatttatagtaaaagtataacttaaaatttggaacaaatctgcacctaaaaatatgtttctcttatttgctaccagcgcaccat 15533085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29754870 - 29754916
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctct 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  29754870 gactccaatcctaatagtgtttctctctatctcaatctctactctct 29754916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 11983457 - 11983562
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgatttta 257  Q
    |||||||||||||||||||| || ||||| || |||||||| |||||||| ||| |||||||| ||||||| |||||||| |||| ||||||||||||||    
T  11983457 tgccacgatttttccagtgc-ttacctcacaa-ctgaaacc-tccatcgtaccatgttgcccaaccatcgtaccacgatt-ctgcagaaacctgatttta 11983552  T
Q  258 agttaactct 267  Q
    ||||||||||    
T  11983553 agttaactct 11983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 15530597 - 15530660
Alignment:
Q  207 gtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||||| ||||||||||||||||||||| ||||  | |||||||||||||||||||||||    
T  15530597 gtgccacgttacccagccatcgtgccacgattcctgcagatcctgattttaagttaactctcac 15530660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 29754994 - 29755059
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  29754994 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 29755059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 4816552 - 4816608
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  4816552 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 4816608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 20915665 - 20915721
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||| | ||||||||| || |||||||||||    
T  20915665 tgatacaaggtctatatttatagtaaaagtcttgcttaaaatctgtaacaaatctgc 20915721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 24192635 - 24192707
Alignment:
Q  93 gcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccac 164  Q
    |||||||||||||||||||| |||||  |||| || ||||||||||||||| |||||||| ||||||||||||    
T  24192635 gcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcatgccac 24192707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 12195813 - 12195851
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12195813 agtttgctttgatacaaggtctatatttatagtaaaagt 12195851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 33308966 - 33308905
Alignment:
Q  55 tgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  33308966 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33308905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 33311235 - 33311174
Alignment:
Q  55 tgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||   ||||||||| |  |||||||||||    
T  33311235 tgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaatctataacaaatctgc 33311174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 24191538 - 24191610
Alignment:
Q  93 gcttaaaatttggaacaaatctgcacccaaaa-tacgtttctgttattcgccgccagcgcaccatcatgccac 164  Q
    |||||||||||||||||||| |||||  |||| || ||||||||||||||| |||||||| ||||||| ||||    
T  24191538 gcttaaaatttggaacaaatttgcactgaaaaatatgtttctgttattcgctgccagcgccccatcataccac 24191610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 15541631 - 15541678
Alignment:
Q  223 ccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||| |||||||||||| || |||||||||||||||||||||||    
T  15541631 ccatcgtggcacgatttctgcaaatcctgattttaagttaactctcac 15541678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 24191620 - 24191667
Alignment:
Q  223 ccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||    
T  24191620 ccatcgtggcacgatttctgtaaaacctgattttaagttaactctcac 24191667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 24192717 - 24192764
Alignment:
Q  223 ccatcgtgccacgatttctgcgaaacctgattttaagttaactctcac 270  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||    
T  24192717 ccatcgtggcacgatttctgtaaaacctgattttaagttaactctcac 24192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 3028149 - 3028186
Alignment:
Q  52 gtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||| |||||||||||||||||||||||||||||||||    
T  3028149 gtttactttgatacaaggtctatatttatagtaaaagt 3028186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 4816689 - 4816749
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacg 214  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||  | |||||||||||    
T  4816689 ccatcgtgccacgatttttccagtaccttgcctc-aaaactgaaacctccaatcgtgccacg 4816749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 12186376 - 12186431
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt-ttcgcttaaaatttggaacaaatct 114  Q
    ||||||||||| ||||||||||||||||||  ||||| |||| |||||||||||||    
T  12186376 tgatacaaggtttatatttatagtaaaagtaatcgctaaaaaattggaacaaatct 12186431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 16455732 - 16455795
Alignment:
Q  61 gatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaa 124  Q
    |||||||||| ||||||||||||||| || || || |||| ||||||||||||||  |||||||    
T  16455732 gatacaaggtatatatttatagtaaaggtatccctgaaaaattggaacaaatctgagcccaaaa 16455795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 1230547 - 1230585
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  1230547 agtttgctatgatacaaggtctatatttatagtgaaagt 1230585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Complemental strand, 7089262 - 7089232
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  7089262 cgggagtggttatggtgcataaggaaatcct 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 28241619 - 28241657
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  28241619 agtttgctctgatacaaggtctatatttatagtgaaagt 28241657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 2629197 - 2629226
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  2629197 tgatacaaggtctatatttatagtaaaagt 2629226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 6900982 - 6900953
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  6900982 gggagtggttatggtgcataaggaaatcct 6900953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 7765453 - 7765424
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  7765453 gggagtggttatggtgcataaggaaatcct 7765424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 15493353 - 15493324
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  15493353 gggagtggttatggtgcataaggaaatcct 15493324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 18755658 - 18755687
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  18755658 gggagtggttatggtgcataaggaaatcct 18755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 917 - 954
Target Start/End: Complemental strand, 21686159 - 21686122
Alignment:
Q  917 atctatacctattaataaagacaatactttcttttggt 954  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  21686159 atctatacctattaataaaggcaatacttttttttggt 21686122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 917 - 946
Target Start/End: Original strand, 23158117 - 23158146
Alignment:
Q  917 atctatacctattaataaagacaatacttt 946  Q
    ||||||||||||||||||||||||||||||    
T  23158117 atctatacctattaataaagacaatacttt 23158146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 30034914 - 30034943
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  30034914 tgatacaaggtctatatttatagtaaaagt 30034943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Original strand, 34869950 - 34869979
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  34869950 gggagtggttatggtgcataaggaaatcct 34869979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 90; Significance: 6e-43; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 2870 - 2753
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  2870 agtttgctctgatacaagttctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcacccaaaaatacgtttatgttattcgctgccagc 2771  T
Q  150 gcaccatcatgccacgat 167  Q
    |||||||| |||||||||    
T  2770 gcaccatcgtgccacgat 2753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 2740 - 2630
Alignment:
Q  159 tgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgcgaaacctgattttaa 258  Q
    |||||||||||||||||| ||||||||||||| ||||||||  | |||||||||||||||| ||| |||||| ||| ||| ||||  | | |||||||||    
T  2740 tgccacgatttttccagtaccttgcctcaaaa-ctgaaacctccaatcgtgccacgttgcctagcaatcgtgtcacaattcctgcagatcttgattttaa 2642  T
Q  259 gttaactctcac 270  Q
    ||||||||||||    
T  2641 gttaactctcac 2630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 15009 - 14902
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagc 149  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  15009 agtttgctctgatacaaggtctatatttatagtaaaagtatcgcttaaaatttggaacaaatctgcacccaaaaatatgtttctgttattcgctgccagc 14910  T
Q  150 gcaccatc 157  Q
    ||||||||    
T  14909 gcaccatc 14902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 14869 - 14767
Alignment:
Q  169 tttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagttaactct 267  Q
    ||||||||| ||||||||| || |||||||   ||||||| |||||||||||  | |||||||||||||| |||| ||| ||||||||||||||||||||    
T  14869 tttccagtgacttgcctcataa-ctgaaacttcccatcgttccacgttgcccttcaatcgtgccacgattcctgcagaatcctgattttaagttaactct 14771  T
Q  268 cacg 271  Q
    ||||    
T  14770 cacg 14767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 73; Significance: 8e-33; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 29142 - 29034
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcac-ccaaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| ||||||||| ||||| ||||||||||||||     
T  29142 tgatacaaggtctatatttatagtaaaagttttgcttaaaatttgtaacaaatctgcactcaaaaatatgtttctgtttttcgctgccagcgcaccatcg 29043  T
Q  159 tgccacgat 167  Q
    |||||||||    
T  29042 tgccacgat 29034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 29005 - 28942
Alignment:
Q  207 gtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctgattttaagttaactctcac 270  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  29005 gtgccacgttgcccagccatcgtgccacga-ttctgcagaaacctgattttaagttaactctcac 28942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 3978 - 3872
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgcaccc-aaaatacgtttctgttattcgccgccagcgcaccatca 158  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||| |||||||||| |||| |||||||||     
T  3978 tgatacaaggtctatatttatagtaaaagtattgcttaaaatttgaaacaaatctgcacccaaaaatacgtttatgttattcgctgccatcgcaccatcg 3879  T
Q  159 tgccacg 165  Q
    |||||||    
T  3878 tgccacg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 67; Significance: 3e-29; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 6044 - 5928
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||  |||||||| ||||||||||| || ||| ||||||||    
T  6044 ccatcatgccacgatttttccagtgccttgcctaaaaaact-aaaacctccatcgtgccgcgaagcccagccgtcgtgccacga-ttgtgcagaaacctg 5947  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  5946 attttaagttaactctcac 5928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 6189 - 6124
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaatttggaacaaatctgc 116  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||  || |||||||||||    
T  6189 agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaaactgtaacaaatctgc 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 153 - 270
Target Start/End: Original strand, 12937 - 13053
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||  | ||||||||||||| |||||| ||||||||    
T  12937 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccacgttgccttgacatcgtgccacga-ttctgcagaaacctg 13034  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  13035 attttaagttaactctcac 13053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 58; Significance: 7e-24; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22243 - 22135
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  22243 gactccaatcctaatagtgtttctctctatctcaatctctcca-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 22151  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  22150 tctataacaaatctgc 22135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24518 - 24410
Alignment:
Q  1 gactccaatcctaatagtgtttctctctatctcaatctctactctcttccagtttgctttgatacaaggtctatatttatagtaaaagtttcgcttaaaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||||||||||||||   ||||||||    
T  24518 gactccaatcctaatagtgtttctctctatctcaatctctcca-------agtttgctttgatacaaggtctatatttatagtaaaagtcctgcttaaaa 24426  T
Q  101 tttggaacaaatctgc 116  Q
    | |  |||||||||||    
T  24425 tctataacaaatctgc 24410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 22032 - 21916
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  22032 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 21935  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  21934 attttaagttaactctcac 21916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 153 - 270
Target Start/End: Complemental strand, 24307 - 24191
Alignment:
Q  153 ccatcatgccacgatttttccagtgccttgcctcaaaaactgaaaccctccatcgtgccacgttgcccagccatcgtgccacgatttctgc-gaaacctg 251  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||| ||  |||||||  ||||||||||| || ||| ||||||||    
T  24307 ccatcgtgccacgatttttccagtgccttgcccaaaaaact-aaaacctccatcgtgccgcgaagcccagctgtcgtgccacga-ttgtgcagaaacctg 24210  T
Q  252 attttaagttaactctcac 270  Q
    |||||||||||||||||||    
T  24209 attttaagttaactctcac 24191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 816 - 846
Target Start/End: Original strand, 539 - 569
Alignment:
Q  816 cgggagtggttatggtgcataaggaaatcct 846  Q
    |||||||||||||||||||||||||||||||    
T  539 cgggagtggttatggtgcataaggaaatcct 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0552 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 1129 - 1167
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  1129 agtttgctctgatacaaggtctatatttatagtgaaagt 1167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 41781 - 41819
Alignment:
Q  51 agtttgctttgatacaaggtctatatttatagtaaaagt 89  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  41781 agtttgctctgatacaaggtctatatttatagtgaaagt 41819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 917 - 954
Target Start/End: Complemental strand, 33916 - 33879
Alignment:
Q  917 atctatacctattaataaagacaatactttcttttggt 954  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  33916 atctatacctattaataaaggcaatacttgcttttggt 33879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 817 - 846
Target Start/End: Complemental strand, 24453 - 24424
Alignment:
Q  817 gggagtggttatggtgcataaggaaatcct 846  Q
    ||||||||||||||||||||||||||||||    
T  24453 gggagtggttatggtgcataaggaaatcct 24424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 89
Target Start/End: Complemental strand, 51990 - 51961
Alignment:
Q  60 tgatacaaggtctatatttatagtaaaagt 89  Q
    ||||||||||||||||||||||||||||||    
T  51990 tgatacaaggtctatatttatagtaaaagt 51961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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