View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3140_high_46 (Length: 265)

Name: NF3140_high_46
Description: NF3140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3140_high_46
NF3140_high_46
[»] chr3 (1 HSPs)
chr3 (1-265)||(9159364-9159628)
[»] chr1 (22 HSPs)
chr1 (1-264)||(9255102-9255365)
chr1 (1-259)||(9318364-9318622)
chr1 (4-259)||(9319680-9319935)
chr1 (4-259)||(9349997-9350252)
chr1 (71-259)||(9348693-9348881)
chr1 (1-258)||(8941793-8942053)
chr1 (1-259)||(8931876-8932137)
chr1 (1-259)||(8955798-8956059)
chr1 (1-259)||(8920471-8920732)
chr1 (161-259)||(9454061-9454159)
chr1 (1-259)||(9486263-9486524)
chr1 (161-259)||(9399407-9399505)
chr1 (161-259)||(9433074-9433172)
chr1 (1-105)||(9399564-9399668)
chr1 (1-105)||(9432911-9433015)
chr1 (1-102)||(9056496-9056597)
chr1 (7-104)||(9142951-9143048)
chr1 (1-38)||(9234133-9234170)
chr1 (166-251)||(9384008-9384093)
chr1 (1-105)||(9453898-9454002)
chr1 (187-259)||(9082799-9082871)
chr1 (163-255)||(9143107-9143199)
[»] chr6 (1 HSPs)
chr6 (1-264)||(15927270-15927533)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 9159628 - 9159364
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||| ||||| ||||||||||||||    
T  9159628 tttggaatgcttttgatggaaatggcaagtaagcgaagaaatttaaatccacatgcggatcgttcaagccaacttttctttccctattggatttataatc 9159529  T
Q  101 aattgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatacaatt 200  Q
    |||||||||||||||  |||||||| |||||| ||||||| |||||||| |  | |||||||||||| ||||||||||||||||||||||| ||||| ||    
T  9159528 aattgattgaagaaaacgagatagagatggatgaaattactgatgaggaaagcagtaatgtgaagaaaatgttcataattgcattatggtgtatacagtt 9159429  T
Q  201 gaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattgcgaata 265  Q
     |||||||| ||||||||||||||||  ||||||||||||||||| |||||| |||||| |||||    
T  9159428 aaaaccaagtgatcgtcctgcaatgaacaaagtaatagagatgctcgaaggaaatattgagaata 9159364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 1e-87; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 9255102 - 9255365
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||||||||||| |||||||| || ||| |||||| |||| ||||||||||| |||    
T  9255102 tttggaatgcttttgattgaaatggcaagtaagaaaagaaatttaaatccacatgccgatcgttcaagtcaaattttctttcccatttggatttatgatc 9255201  T
Q  101 aattgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatacaatt 200  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  9255202 aattgattgaagaaaaggagatagaaatggatgaaattacatatgaggaaaataataatgtgaagaagatgttcataatagcattatggtgtatacaatt 9255301  T
Q  201 gaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattgcgaat 264  Q
    ||||||| | ||||||||  ||||||  ||||| ||||||||||||||||||||||||| ||||    
T  9255302 gaaaccatgtgatcgtccctcaatgaataaagtgatagagatgcttgaaggagatattgagaat 9255365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 9318364 - 9318622
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||| || ||| |||||| |||| |||||||||||||||    
T  9318364 tttggaatgcttttgatggaaatggcaagtaagaaaagaaatttaaatccacatgccgatcgttcaagtcaaattttctttcccatttggatttataatc 9318463  T
Q  101 aattgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatacaatt 200  Q
    ||||||||||||| | |||||||||||| ||| |||||||| | ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  9318464 aattgattgaagacaaggagatagaaatagatgaaattacatacgaggaaaataataatgtgaagaagatgttcataattgcattatggtgtatacaatt 9318563  T
Q  201 gaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||||| | ||||||||| ||||||  ||||| |||||||||||||||||| ||||||    
T  9318564 gaaaccatgtgatcgtccttcaatgaacaaagtgatagagatgcttgaaggaaatattg 9318622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 4 - 259
Target Start/End: Complemental strand, 9319935 - 9319680
Alignment:
Q  4 ggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatcaat 103  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||||||| || ||||| || ||| |||||| |||| ||||||||||||||||||    
T  9319935 ggaatgcttttgatggaaatggcaagtaagaaaagaaacttaaatccacatgccgaacgttcaagtcaaattttctttcccatttggatttataatcaat 9319836  T
Q  104 tgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatacaattgaa 203  Q
    ||  ||| |||||||| |||||||||||| ||||  || ||||||| || | |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9319835 tggctgatgaaagggaaatagaaatggatgaaatctcatatgaggaaaatattaatgtgaagaagatgttcataatagcattatggtgtatacaattgaa 9319736  T
Q  204 accaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    |||| | ||||||||| ||||||  ||||| |||||||||||||||||| ||||||    
T  9319735 accatgtgatcgtccttcaatgaacaaagtgatagagatgcttgaaggaaatattg 9319680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 4 - 259
Target Start/End: Complemental strand, 9350252 - 9349997
Alignment:
Q  4 ggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatcaat 103  Q
    |||||||||||||||||||| |||||||||| || |||||||||||||||||| || ||||| || ||| |||||| |||| ||||||||||||||||||    
T  9350252 ggaatgcttttgatggaaatcgcaagtaagaaaagaaatttaaatccacatgccgaacgttcaagtcaaattttctttcccatttggatttataatcaat 9350153  T
Q  104 tgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatacaattgaa 203  Q
    ||  ||| |||||||| |||||||||||| ||||  || ||||||| || | |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  9350152 tggctgatgaaagggaaatagaaatggatgaaatctcatatgaggaaaatattaatgtgaagaagatgttcataatagcattatggtgtatacaattgaa 9350053  T
Q  204 accaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    |||| | ||||||||| ||||||  ||||| |||||||||||||||||| ||||||    
T  9350052 accatgtgatcgtccttcaatgaacaaagtgatagagatgcttgaaggaaatattg 9349997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 71 - 259
Target Start/End: Original strand, 9348693 - 9348881
Alignment:
Q  71 aacttttctatcccttttggatttataatcaattgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatgtgaagaagat 170  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||| |||||||| || | |||||||||||| ||    
T  9348693 aacttttctttccgttttggatttataatcaatggattgaagaaaaggagatagagatggatgaaattactgatgaggaaaacagtaatgtgaagaaaat 9348792  T
Q  171 gttcataattgcattatggtgcatacaattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||||||||||||||||||| ||||| || |||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  9348793 gttcataattgcattatggtgtatacagttaaaaccaagtgatcgtcctgcaatgaataaagtaatagagatgctcgaaggagatattg 9348881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 8942053 - 8941793
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||| || |||||||| ||||  | ||||| |||||||||  || ||||||||  ||| |||||| |||||| ||||| ||||||||| |||     
T  8942053 tttggaatgctcttaatggaaatagcaaacaggagaagaaatttaaactcaaatgcagatgattcaagccaaattttctttccctattggatttacaatg 8941954  T
Q  101 aattgattgaagaaagggagatagaaa---tggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcataca 197  Q
    ||||| |||||||||||||||||||||   |||   || |||| |||||||| ||||| ||||||||||| ||||||||| |||| || ||||| |||||    
T  8941953 aattggttgaagaaagggagatagaaatattgggagaagttacggatgaggaaaaaaaaaatgtgaagaaaatgttcatagttgctttgtggtgtataca 8941854  T
Q  198 attgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatatt 258  Q
    |||||| || |  || |||||| |||||   ||||||||||| |||||||||| |||||||    
T  8941853 attgaagcccaatgaccgtccttcaatggacaaagtaatagaaatgcttgaagtagatatt 8941793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 8932137 - 8931876
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||| || |||||||| ||||  | ||||| |||||| ||  || ||||||||  ||| |||||| |||||| ||||| ||||||||| |||     
T  8932137 tttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaattttctttccctattggatttacaatg 8932038  T
Q  101 aattgattgaagaaagggagatagaaat----ggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatac 196  Q
    ||||||| ||||||||||||||||| ||    |||  ||  ||| |||||||| || || ||||||||||||||||||||||||||  | ||||| ||||    
T  8932037 aattgatggaagaaagggagatagatatatctggag-aagctaccgatgaggaaaagaaaaatgtgaagaagatgttcataattgctctgtggtgtatac 8931939  T
Q  197 aattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||||| || |  ||||||||| |||||   | ||||||||| |||||||||||||||||||    
T  8931938 aattgaaccctattgatcgtccttcaatggacagagtaatagaaatgcttgaaggagatattg 8931876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 8956059 - 8955798
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||| || |||||||| ||||  | ||||| |||||| ||  || ||||||||  ||| |||||| |||||| ||||| ||||||||| |||     
T  8956059 tttggaatgctcttaatggaaatagcaaacaggagaagaaatttgaactcaaatgcagatgattcaagccaaattttctttccctattggatttacaatg 8955960  T
Q  101 aattgattgaagaaagggagatagaaat----ggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatac 196  Q
    |||||||||||||||| |||||||| ||    |||  ||  ||| |||||||| || || ||||||||||||||||||||||||||  | ||||| ||||    
T  8955959 aattgattgaagaaagagagatagatatatctggag-aagctaccgatgaggaaaagaaaaatgtgaagaagatgttcataattgctctgtggtgtatac 8955861  T
Q  197 aattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||||| || |  ||||||||| |||||   | ||||||||| |||||||||||||||||||    
T  8955860 aattgaaccctattgatcgtccttcaatggacagagtaatagaaatgcttgaaggagatattg 8955798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 8920732 - 8920471
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||| ||||||||||| ||||  | ||||| |||||| ||  || ||||| ||  |||   |||| |||||| ||||| |||||| || |||     
T  8920732 tttggaatgctcttgatggaaatagcaaacaggagaagaaatttgaactcaaatgcaaatgattcagaccaaattttctttccctattggatctacaatg 8920633  T
Q  101 aattgattgaagaaagggagatagaaat---ggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcataca 197  Q
    ||||||||||||||||||||||||||||   ||   ||  |||  ||||||| || || ||||||||||||||||||||||||||  ||||||| |||||    
T  8920632 aattgattgaagaaagggagatagaaatattgggagaagctaccaatgaggaaaagaaaaatgtgaagaagatgttcataattgctatatggtgtataca 8920533  T
Q  198 attgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    |||||| || |  ||||||||| |||||   | ||||||||| |||||||||||||||||||    
T  8920532 attgaaccctattgatcgtccttcaatgtacagagtaatagaaatgcttgaaggagatattg 8920471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 9454061 - 9454159
Alignment:
Q  161 tgaagaagatgttcataattgcattatggtgcatacaattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||||| ||||||||| ||| ||||||||| ||||| |||||||| |  ||||||||| |||||| ||||||| ||||||||||||||||||||||||    
T  9454061 tgaagaaaatgttcatagttggattatggtgtatacagttgaaacccattgatcgtccttcaatgaaaaaagtagtagagatgcttgaaggagatattg 9454159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 9486263 - 9486524
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||||||||| |||||||||||||  |||| |||||| ||| ||||||| || | ||| || ||||||| || |||||||||||||||| |||    
T  9486263 tttggaatgcttttgattgaaatggcaagtagaagaagaaatttgaatacacatgctgagcattcaagtcaactttactttcccttttggatttatgatc 9486362  T
Q  101 aattgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatg---tgaagaagatgttcataattgcattatggtgcataca 197  Q
    |  ||  |||| | || || | |||||||||  |  |||     ||||| |  ||| |||   ||||||| |||||| || ||||| | ||||| |||||    
T  9486363 agctgtctgaaaatagagaaagagaaatggaagatgttatcatggaggaaatcaatgatgttttgaagaaaatgttcctagttgcactttggtgtataca 9486462  T
Q  198 attgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
     |||||||| |  ||||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  9486463 gttgaaacccattgatcgtccttcaatgaacaaagtagtagagatgcttgaaggagatattg 9486524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 9399505 - 9399407
Alignment:
Q  161 tgaagaagatgttcataattgcattatggtgcatacaattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||||| ||||||||| ||||| | ||||| ||||| |||||||| |  ||||||||| ||||||  |||||| |||||||||||||||| |||||||    
T  9399505 tgaagaaaatgttcatagttgcactttggtgtatacagttgaaacccattgatcgtccttcaatgaacaaagtagtagagatgcttgaaggggatattg 9399407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 9433074 - 9433172
Alignment:
Q  161 tgaagaagatgttcataattgcattatggtgcatacaattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||||| || |||||| ||||| | ||||| ||||| ||||||||    ||||||||| ||||||  |||||| ||||||||||||||||||||||||    
T  9433074 tgaagaaaatattcatagttgcactttggtgtatacagttgaaacccgttgatcgtccttcaatgaacaaagtagtagagatgcttgaaggagatattg 9433172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9399668 - 9399564
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||| ||||||||||| ||||| ||||||| ||||| |||||| ||| ||||||| || | ||| || |||||||  |  ||||||||||||||| |||    
T  9399668 tttggtatgcttttgattgaaattgcaagtaggagaagaaatttgaattcacatgctgagcattcaagtcaactttatttccccttttggatttatgatc 9399569  T
Q  101 aattg 105  Q
    |||||    
T  9399568 aattg 9399564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9432911 - 9433015
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||||||||| ||||| |||||||  |||| |||||| ||| ||||||| || | ||| || |||||||  |  ||||||||||||||| |||    
T  9432911 tttggaatgcttttgattgaaatcgcaagtagaagaagaaatttgaattcacatgctgagcattcaagtcaactttatttccccttttggatttatgatc 9433010  T
Q  101 aattg 105  Q
    |||||    
T  9433011 aattg 9433015  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9056597 - 9056496
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||| ||||||||||||||||||||||| ||||| |||||  | || ||||||||||  | ||| ||||| | ||  | |||||||||||||||| |||    
T  9056597 tttggtatgcttttgatggaaatggcaagcaagaggaaaaacatgaacccacatgcagcgcattcaagccagcattattttcccttttggatttatgatc 9056498  T
Q  101 aa 102  Q
    ||    
T  9056497 aa 9056496  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 9142951 - 9143048
Alignment:
Q  7 atgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatcaatt 104  Q
    |||||||||||||| ||||||||||| ||||||||  ||||| | ||||| ||   ||| |||||||||| || ||| || ||||||||| |||||||    
T  9142951 atgcttttgatggagatggcaagtaaaagaaaaaacctaaatgcccatgcggagtattcaagccaactttactttcctttatggatttatgatcaatt 9143048  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9234133 - 9234170
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaa 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  9234133 tttggaatgcttttgatggaaatggcaggtaagagaaa 9234170  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 251
Target Start/End: Complemental strand, 9384093 - 9384008
Alignment:
Q  166 aagatgttcataattgcattatggtgcatacaattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaagg 251  Q
    |||||||||||  ||||||| ||||| || || |||||||| || ||||||||| ||||||  |||||| | ||||||||||||||    
T  9384093 aagatgttcatggttgcattttggtgtattcagttgaaaccgagtgatcgtcctacaatgaacaaagtagttgagatgcttgaagg 9384008  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9453898 - 9454002
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctat-cccttttggatttataat 99  Q
    |||||||||||| |||| ||||| ||||||| ||| | |||||| ||| ||||||| || | ||| ||||||| ||| ||| ||||||||||||||| ||    
T  9453898 tttggaatgcttctgattgaaattgcaagtaggagtagaaatttgaattcacatgctgagcattcaagccaac-tttatatccccttttggatttatgat 9453996  T
Q  100 caattg 105  Q
    ||||||    
T  9453997 caattg 9454002  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 9082799 - 9082871
Alignment:
Q  187 tggtgcatacaattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattg 259  Q
    ||||| ||||||||||||||||  ||||||||| | ||||  | |||| | ||||||||||||||||||||||    
T  9082799 tggtgtatacaattgaaaccaaatgatcgtccttcgatgagtagagtagtggagatgcttgaaggagatattg 9082871  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 255
Target Start/End: Original strand, 9143107 - 9143199
Alignment:
Q  163 aagaagatgttcataattgcattatggtgcatacaattgaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagat 255  Q
    ||||||||| ||||| ||||| | ||||| |||||||||||||||   ||||| ||  ||||||  |||||| | |||||||| |||||||||    
T  9143107 aagaagatgatcatagttgcactttggtgtatacaattgaaaccagctgatcgcccctcaatgaacaaagtagtggagatgctcgaaggagat 9143199  T

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Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 15927270 - 15927533
Alignment:
Q  1 tttggaatgcttttgatggaaatggcaagtaagagaaaaaatttaaatccacatgcagatcgttcgagccaacttttctatcccttttggatttataatc 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||  || ||||||||||||||||    
T  15927270 tttggaatgcttttgatggaaatggcaagtaagagaagaaatttaaatccacatgcggatcgttcaagccaacttttcttccctttttggatttataatc 15927369  T
Q  101 aattgattgaagaaagggagatagaaatggatcaaattacagatgaggataaaaataatgtgaagaagatgttcataattgcattatggtgcatacaatt 200  Q
    ||||||||||| ||||||||||||| ||||| |||||||  |||||||| | |||||||||||| || |||||||||| |||||||||||| || |||||    
T  15927370 aattgattgaaaaaagggagatagagatggaccaaattagtgatgaggaaagaaataatgtgaataaaatgttcataactgcattatggtgtattcaatt 15927469  T
Q  201 gaaaccaagcgatcgtcctgcaatgacaaaagtaatagagatgcttgaaggagatattgcgaat 264  Q
     |||||||| ||||||||| ||||||  | ||| ||||||||||||||||||||||||| ||||    
T  15927470 aaaaccaagtgatcgtccttcaatgaacagagtgatagagatgcttgaaggagatattgagaat 15927533  T

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