View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3140_low_2 (Length: 773)

Name: NF3140_low_2
Description: NF3140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3140_low_2
NF3140_low_2
[»] chr5 (25 HSPs)
chr5 (315-773)||(37430557-37431015)
chr5 (252-299)||(32872785-32872832)
chr5 (251-303)||(36562936-36562988)
chr5 (124-175)||(24486894-24486944)
chr5 (144-182)||(34379482-34379520)
chr5 (123-184)||(5007734-5007794)
chr5 (145-182)||(32912068-32912105)
chr5 (145-185)||(11954461-11954501)
chr5 (261-301)||(16971985-16972025)
chr5 (123-182)||(4434479-4434537)
chr5 (123-182)||(14206397-14206455)
chr5 (147-182)||(22649666-22649701)
chr5 (18-80)||(37431018-37431078)
chr5 (124-182)||(3640201-3640258)
chr5 (261-299)||(11954577-11954615)
chr5 (123-180)||(14923080-14923135)
chr5 (124-182)||(32732123-32732180)
chr5 (144-182)||(40829443-40829481)
chr5 (144-181)||(6940155-6940192)
chr5 (145-178)||(7076577-7076610)
chr5 (145-182)||(8675437-8675474)
chr5 (145-182)||(14532534-14532571)
chr5 (252-301)||(31748473-31748522)
chr5 (145-182)||(34124651-34124688)
chr5 (125-182)||(43153065-43153121)
[»] chr7 (27 HSPs)
chr7 (251-302)||(29723809-29723860)
chr7 (251-300)||(2008718-2008767)
chr7 (123-179)||(26749014-26749068)
chr7 (251-299)||(12007073-12007121)
chr7 (251-299)||(15325527-15325575)
chr7 (251-302)||(37352246-37352297)
chr7 (124-182)||(11352978-11353035)
chr7 (144-182)||(18111616-18111654)
chr7 (145-187)||(46880932-46880974)
chr7 (251-296)||(28249460-28249505)
chr7 (126-182)||(33465044-33465099)
chr7 (251-299)||(33845178-33845226)
chr7 (124-188)||(41985099-41985162)
chr7 (123-182)||(43942646-43942703)
chr7 (264-300)||(46881051-46881087)
chr7 (123-182)||(3937126-3937184)
chr7 (123-181)||(2323301-2323358)
chr7 (251-301)||(32777592-32777642)
chr7 (123-184)||(2469700-2469760)
chr7 (251-296)||(21103148-21103193)
chr7 (145-182)||(24532947-24532984)
chr7 (123-188)||(37351989-37352053)
chr7 (145-182)||(40353294-40353331)
chr7 (251-300)||(43807699-43807748)
chr7 (125-182)||(45420065-45420121)
chr7 (145-182)||(47145077-47145114)
chr7 (125-182)||(49142522-49142578)
[»] chr4 (30 HSPs)
chr4 (251-299)||(39158241-39158289)
chr4 (251-299)||(51255882-51255930)
chr4 (251-299)||(18316073-18316121)
chr4 (125-178)||(25318073-25318128)
chr4 (251-299)||(38519929-38519977)
chr4 (261-298)||(21014143-21014180)
chr4 (145-182)||(40348823-40348860)
chr4 (126-182)||(48335564-48335621)
chr4 (261-302)||(55266171-55266212)
chr4 (127-187)||(5386385-5386444)
chr4 (251-299)||(29227130-29227178)
chr4 (127-182)||(9095949-9096003)
chr4 (252-299)||(22813609-22813656)
chr4 (116-182)||(39605969-39606033)
chr4 (123-182)||(43769720-43769778)
chr4 (124-182)||(28657445-28657502)
chr4 (124-182)||(37727059-37727117)
chr4 (145-187)||(39158135-39158177)
chr4 (144-182)||(49585023-49585061)
chr4 (150-184)||(56557768-56557802)
chr4 (145-182)||(149489-149526)
chr4 (126-182)||(1580288-1580342)
chr4 (124-180)||(4106052-4106106)
chr4 (124-181)||(4949516-4949572)
chr4 (145-182)||(7627878-7627915)
chr4 (145-182)||(26206981-26207018)
chr4 (251-300)||(26600085-26600134)
chr4 (125-182)||(31657657-31657713)
chr4 (147-184)||(41262347-41262384)
chr4 (126-182)||(50608629-50608683)
[»] chr3 (23 HSPs)
chr3 (251-299)||(29525999-29526047)
chr3 (126-184)||(9753230-9753287)
chr3 (251-301)||(34307426-34307476)
chr3 (251-299)||(4494124-4494172)
chr3 (120-182)||(19148996-19149056)
chr3 (127-182)||(35377086-35377141)
chr3 (123-182)||(50745557-50745615)
chr3 (145-187)||(38671647-38671689)
chr3 (123-182)||(3281720-3281778)
chr3 (261-296)||(27168572-27168607)
chr3 (125-184)||(47683800-47683858)
chr3 (123-182)||(49361840-49361898)
chr3 (123-182)||(49761316-49761374)
chr3 (147-181)||(10464975-10465009)
chr3 (124-182)||(29846896-29846953)
chr3 (145-182)||(3953479-3953516)
chr3 (145-182)||(24095410-24095447)
chr3 (126-178)||(24256780-24256830)
chr3 (125-182)||(28700471-28700527)
chr3 (125-182)||(35368621-35368677)
chr3 (123-152)||(38470597-38470626)
chr3 (251-296)||(39713927-39713972)
chr3 (145-182)||(50314654-50314691)
[»] chr8 (23 HSPs)
chr8 (252-299)||(33451452-33451499)
chr8 (251-299)||(1068742-1068790)
chr8 (125-181)||(7010684-7010739)
chr8 (124-182)||(9963694-9963752)
chr8 (261-300)||(42652739-42652778)
chr8 (123-188)||(40413348-40413412)
chr8 (126-182)||(6243045-6243100)
chr8 (251-299)||(15716863-15716911)
chr8 (251-299)||(33107754-33107802)
chr8 (251-299)||(34435624-34435672)
chr8 (251-299)||(44091022-44091070)
chr8 (123-182)||(14710898-14710956)
chr8 (267-298)||(36874001-36874032)
chr8 (127-182)||(39211054-39211108)
chr8 (128-181)||(17823469-17823520)
chr8 (144-182)||(28756564-28756602)
chr8 (124-182)||(30439510-30439567)
chr8 (124-182)||(37392133-37392190)
chr8 (145-178)||(8645195-8645228)
chr8 (252-301)||(11134720-11134769)
chr8 (150-187)||(34435736-34435773)
chr8 (121-182)||(38939194-38939254)
chr8 (145-182)||(41520998-41521035)
[»] chr2 (23 HSPs)
chr2 (261-299)||(26480977-26481015)
chr2 (466-512)||(41265762-41265808)
chr2 (251-301)||(44239172-44239222)
chr2 (251-300)||(2427885-2427934)
chr2 (251-304)||(11965929-11965982)
chr2 (124-181)||(42607536-42607592)
chr2 (123-182)||(6049349-6049408)
chr2 (123-182)||(10711733-10711791)
chr2 (251-300)||(37731086-37731135)
chr2 (126-182)||(37737982-37738036)
chr2 (251-295)||(14877125-14877169)
chr2 (251-299)||(31578570-31578618)
chr2 (251-299)||(37316702-37316750)
chr2 (127-179)||(13265975-13266029)
chr2 (122-153)||(17569749-17569780)
chr2 (144-187)||(19916684-19916727)
chr2 (148-187)||(37003643-37003682)
chr2 (123-181)||(6646832-6646889)
chr2 (144-182)||(21738620-21738658)
chr2 (144-182)||(40210072-40210110)
chr2 (125-182)||(22296134-22296190)
chr2 (125-182)||(22353180-22353236)
chr2 (150-187)||(37731199-37731236)
[»] chr1 (31 HSPs)
chr1 (261-299)||(4213218-4213256)
chr1 (251-295)||(7918953-7918997)
chr1 (126-182)||(47398456-47398511)
chr1 (251-299)||(47642494-47642542)
chr1 (251-299)||(48983555-48983603)
chr1 (251-302)||(38878785-38878836)
chr1 (123-181)||(50797788-50797845)
chr1 (145-181)||(8846003-8846039)
chr1 (126-182)||(18336158-18336213)
chr1 (251-299)||(27742745-27742793)
chr1 (251-299)||(40439727-40439775)
chr1 (251-299)||(42468728-42468776)
chr1 (126-182)||(51718631-51718687)
chr1 (123-182)||(8200084-8200142)
chr1 (123-182)||(11121489-11121547)
chr1 (123-182)||(38303692-38303751)
chr1 (123-182)||(40596059-40596117)
chr1 (123-182)||(48325783-48325841)
chr1 (123-181)||(611641-611698)
chr1 (145-187)||(4213102-4213144)
chr1 (125-187)||(4857921-4857982)
chr1 (124-182)||(33358163-33358220)
chr1 (126-188)||(37690429-37690490)
chr1 (121-178)||(48103398-48103453)
chr1 (144-182)||(52437523-52437561)
chr1 (145-182)||(5771752-5771789)
chr1 (145-182)||(40328745-40328782)
chr1 (144-181)||(46281465-46281502)
chr1 (125-182)||(48220148-48220204)
chr1 (251-300)||(48858959-48859008)
chr1 (145-178)||(50824771-50824804)
[»] chr6 (9 HSPs)
chr6 (261-301)||(17182244-17182284)
chr6 (461-512)||(34260975-34261026)
chr6 (261-299)||(1287059-1287097)
chr6 (251-299)||(33712456-33712504)
chr6 (147-182)||(5570338-5570373)
chr6 (252-299)||(5739651-5739698)
chr6 (251-301)||(8645444-8645494)
chr6 (150-184)||(34442065-34442099)
chr6 (251-296)||(18064980-18065025)
[»] scaffold0204 (1 HSPs)
scaffold0204 (126-182)||(23086-23143)
[»] scaffold0201 (1 HSPs)
scaffold0201 (251-300)||(8608-8657)
[»] scaffold0618 (1 HSPs)
scaffold0618 (251-299)||(8840-8888)
[»] scaffold0276 (1 HSPs)
scaffold0276 (124-182)||(1656-1711)
[»] scaffold0184 (1 HSPs)
scaffold0184 (251-299)||(13444-13492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (251-299)||(59352-59400)
[»] scaffold0034 (1 HSPs)
scaffold0034 (257-297)||(101790-101830)
[»] scaffold0054 (1 HSPs)
scaffold0054 (124-182)||(31605-31662)


Alignment Details
Target: chr5 (Bit Score: 439; Significance: 0; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 315 - 773
Target Start/End: Complemental strand, 37431015 - 37430557
Alignment:
Q  315 acagtatattgtgatattagtaacaatgaaactgaatgactaattatttcatttggtttataatttacaaagtactatttgcatatgcttattcaaatta 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37431015 acagtatattgtgatattagtaacaatgaaactgaatgactaattatttcatttggtttataatttacaaagtactatttgcatatgcttattcaaatta 37430916  T
Q  415 aatacttctaaaatttagcatgcagcataaatttatcagtaacaaatatggaatgtgaatgtaaatgtcttaatttatacacgaaacaagattaatttgg 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430915 aatacttctaaaatttagcatgcagcataaatttatcagtaacaaatatggaatgtgaatgtaaatgtcttaatttatacacgaaacaagattaatttgg 37430816  T
Q  515 aaattgtgatcataggaattgttctattaacgaattaaacactgtataggtaaagcattaagatttgtcaaaccagaacaccagaaaagatttgtcaaac 614  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430815 aaattgtgatcataggaattattctattaacgaattaaacactgtataggtaaagcattaagatttgtcaaaccagaacaccagaaaagatttgtcaaac 37430716  T
Q  615 caggacaggaaaacactaatagtccaatgcacaagacaagactaccacaatttcaaatacaaagagaataagacatatatgcaatattcttttcccttat 714  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37430715 caggacaggaaaacactaatagtccaatgcacaagacaagactaccacaatttcaaatacaaagagaataagacatatatgcaatattcttttccctgat 37430616  T
Q  715 tcattcttcttatcaactactatatgtttgcaatcaatgctttgtaggtcatgcttctg 773  Q
    ||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  37430615 tcattctgcttatcaactactatatggttgcaatcaatgcttagtaggtcatgcttctg 37430557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 32872832 - 32872785
Alignment:
Q  252 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32872832 ttgtccaacaagttgtcacaagaaagggttgttcaaataacattgctc 32872785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 36562988 - 36562936
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcattg 303  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  36562988 gttgtccaacaagttgtcccaacaaagggttgttcaaataacattcctcattg 36562936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 24486894 - 24486944
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatac 175  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  24486894 aagagaaatgatatttgaacaataatttttg-tacaattttctttctcatac 24486944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 34379482 - 34379520
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  34379482 aataatttttgtgacaattttctctctcatactcacatt 34379520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 5007794 - 5007734
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 184  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||| || |||||    
T  5007794 aaagagaaatgatatttgaacaacaa-ttttgtgacaattttctctttcatacacatattgt 5007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 32912068 - 32912105
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  32912068 ataatttttgtgacaattttctctctcatactcacatt 32912105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 11954461 - 11954501
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacattgtt 185  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  11954461 ataatttttgtgacaactttctctctcatactcacattgtt 11954501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 16972025 - 16971985
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  16972025 aagttgtcacaataaatgattgttcaaataacattgctcat 16971985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 4434479 - 4434537
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||| ||||  ||||||  ||||||||| |||||||||||||||||    
T  4434479 aaagagaaatgatatttgtacaaccatttttt-gacaattttttctctcatactcacatt 4434537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 14206397 - 14206455
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  14206397 aaagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 14206455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 182
Target Start/End: Complemental strand, 22649701 - 22649666
Alignment:
Q  147 aatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||| |||||||||||||||||||||||||||    
T  22649701 aatttttgtgacaattttctctctcatactcacatt 22649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 37431078 - 37431018
Alignment:
Q  18 aataccaacttgaaaagtattcatatttgattgcccaataatatgtctcgaatatgattaact 80  Q
    ||||||||||||| ||||||||||||||||||| | ||||  |||||||||| | ||||||||    
T  37431078 aataccaacttgagaagtattcatatttgattgtctaata--atgtctcgaacaagattaact 37431018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 3640258 - 3640201
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  3640258 aagagaaatgatatttgaacatctatttt-gagacaactttctctctcatactcacatt 3640201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 11954577 - 11954615
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  11954577 aagttgtcaaaataaatggttgttcaaataacattgctc 11954615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 14923080 - 14923135
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcaca 180  Q
    |||||||||||||||||||||||  ||||||   |||| |||||||||||||||||||    
T  14923080 aaagagaaatgatatttgaacaaccattttt--tacaactttctctctcatactcaca 14923135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 32732180 - 32732123
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||| ||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  32732180 aagagaaattatatttgtacaatcatttttgt-acaactttctctctcatactcacatt 32732123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 40829443 - 40829481
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  40829443 aataatttttgtgacaattttttctctcatactcacatt 40829481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 6940192 - 6940155
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacat 181  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  6940192 aataatttttgtgacaactttctctctcatactcacat 6940155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 7076610 - 7076577
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  7076610 ataatttttgtgacaattttctctctcatactca 7076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 8675474 - 8675437
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  8675474 ataacttttgcaacaattttctctctcatactcacatt 8675437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 14532534 - 14532571
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  14532534 ataatttttgtgacaactttctctctcatactcacatt 14532571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 31748473 - 31748522
Alignment:
Q  252 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    |||||||| |||||||||||| ||| | ||||||||||||||| ||||||    
T  31748473 ttgtccaataagttgtcacaaaaaatgattgttcaaataacatcgctcat 31748522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 34124651 - 34124688
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| || ||||||||||||||||||||||||    
T  34124651 ataatttttgtgataattttctctctcatactcacatt 34124688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 43153121 - 43153065
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||| |||| ||||||||  |||| ||||||||||||| |||||||    
T  43153121 agagaaatgatatttgtacaacaatttttg-tacaactttctctctcatattcacatt 43153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 29723860 - 29723809
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcatt 302  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  29723860 gttgtccaacaagttgtcacaataaatggttgtacaaataacattgctcatt 29723809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 2008767 - 2008718
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  2008767 gttgtccaacaagttgtcacataaaatggttgttcaaataacattgctca 2008718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 26749014 - 26749068
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcac 179  Q
    ||||||||||||||||||||||| |||||||  ||||| ||||||||||||||||||    
T  26749014 aaagagaaatgatatttgaacaacaattttt--gacaactttctctctcatactcac 26749068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 12007121 - 12007073
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  12007121 gttgtccaacaagttgtcacaataaatagttgtacaaataacattgctc 12007073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 15325575 - 15325527
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  15325575 gttgtccaacaagttgtcacataaaaaggttgttcaaataacattgctc 15325527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 37352246 - 37352297
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcatt 302  Q
    ||||||||||||||||  |||| ||| |||||||||||||||||||||||||    
T  37352246 gttgtccaacaagttggtacaagaaatggttgttcaaataacattgctcatt 37352297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 11353035 - 11352978
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||  |||||| | ||||| |||||||||||||||||||||    
T  11353035 aagagaaatgatatttgaacatcaatttt-gtgacaactttctctctcatactcacatt 11352978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 18111654 - 18111616
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  18111654 aataatttttgtgacaattttctctctcatactcacatt 18111616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 46880932 - 46880974
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacattgttct 187  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  46880932 ataatttttgcgataattttctctctcatactcatattgttct 46880974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 28249505 - 28249460
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 296  Q
    ||||||||| |||||||||||| ||| |||||||||||||||||||    
T  28249505 gttgtccaaaaagttgtcacaagaaatggttgttcaaataacattg 28249460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 33465099 - 33465044
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||| ||||  |||||||  ||||||||||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgt-acaattttctctctcatactcacatt 33465044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 33845178 - 33845226
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  33845178 gttgtccaacaaattgtcacatgaaaaggttgttcaaataacattgctc 33845226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 41985162 - 41985099
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 188  Q
    ||||||||||||||||| ||||| | ||| | ||||| ||||||||||||||||||||| |||||    
T  41985162 aagagaaatgatatttgtacaatcaattt-gtgacaactttctctctcatactcacattattctc 41985099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 43942646 - 43942703
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||||  ||||||   |||| |||||||||||||||||||||    
T  43942646 aaagagaaatgatatttgaacaactattttt--tacaactttctctctcatactcacatt 43942703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 46881051 - 46881087
Alignment:
Q  264 ttgtcacaataaagggttgttcaaataacattgctca 300  Q
    |||||| ||||||||||||||||||||||||||||||    
T  46881051 ttgtcataataaagggttgttcaaataacattgctca 46881087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 3937184 - 3937126
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  3937184 aaagagaaatgatatttgaacatctatttt-gtgacaactttctctctcatactcacatt 3937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 2323301 - 2323358
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    |||||||||||||||||| |||| || ||||  ||||| ||||||||||||||||||||    
T  2323301 aaagagaaatgatatttgtacaacaa-ttttatgacaactttctctctcatactcacat 2323358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 32777642 - 32777592
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    ||||||||||||||| | |||| ||| | ||||||||||||||||||||||    
T  32777642 gttgtccaacaagttattacaagaaaagattgttcaaataacattgctcat 32777592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 2469700 - 2469760
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 184  Q
    |||||||||||||||||| ||||  | ||| | ||||| |||||||||||||||||||||||    
T  2469700 aaagagaaatgatatttgtacaaccacttt-gtgacaactttctctctcatactcacattgt 2469760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 21103148 - 21103193
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 296  Q
    ||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  21103148 gttgtccaacaagttatcacaagaaatggttgttcaaatatcattg 21103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 24532984 - 24532947
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  24532984 ataatttttgtgacaattttttctctcatactcacatt 24532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 37352053 - 37351989
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 188  Q
    |||||||||||||||||| ||||  | ||| | ||||| ||||||||||||||||||||| |||||    
T  37352053 aaagagaaatgatatttgtacaaccacttt-gtgacaactttctctctcatactcacattattctc 37351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 40353294 - 40353331
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  40353294 ataatttttgcaacaactttctctctcatactcacatt 40353331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 43807748 - 43807699
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    ||||| |||||| |||||| || |||||||||||||||||||| ||||||    
T  43807748 gttgtacaacaaattgtcataagaaagggttgttcaaataacactgctca 43807699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 45420121 - 45420065
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||  ||||||  ||||| ||||||||||||| |||||||    
T  45420121 agagaaatgatatttgaacaactattttt-tgacaactttctctctcatattcacatt 45420065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 47145114 - 47145077
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  47145114 ataatttttgtgacaattttctctctcacactcacatt 47145077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 49142578 - 49142522
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||| ||||  |||||||  | ||||||||||||||||||||||||    
T  49142578 agagaaatgatatttgtacaaccatttttgtaa-aattttctctctcatactcacatt 49142522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 39158241 - 39158289
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  39158241 gttgtccaataagttgtcacaataaatggttgttcaaataacattgctc 39158289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 51255882 - 51255930
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  51255882 gttgtccaacaagttgtcacaataaatggttgtacaaataacattgctc 51255930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 18316073 - 18316121
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  18316073 gttgtccaacaagttgtcataagaaatggttgttcaaataacattgctc 18316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 25318128 - 25318073
Alignment:
Q  125 agagaaatgatatttgaaca--ataatttttgcgacaattttctctctcatactca 178  Q
    |||||||||||||||||| |  |||| |||||||||||||||||||||||||||||    
T  25318128 agagaaatgatatttgaatatgataacttttgcgacaattttctctctcatactca 25318073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 38519929 - 38519977
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||||    
T  38519929 gttgtccaacaagttgtcacaataaatggttatacaaataacattgctc 38519977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Original strand, 21014143 - 21014180
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgct 298  Q
    |||||||||||||||| |||||||||||||||||||||    
T  21014143 aagttgtcacaataaaaggttgttcaaataacattgct 21014180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 40348823 - 40348860
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40348823 ataatttttgtgacaattttctctctcatactcacatt 40348860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 48335564 - 48335621
Alignment:
Q  126 gagaaatgatatttgaaca-ataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||||||||| |||||||    
T  48335564 gagaaatgatattcgaacatacaatttttgcaacaattttctctctcatattcacatt 48335621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 55266171 - 55266212
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctcatt 302  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  55266171 aagttatcacaataaaggattgttcaaataacattgctcatt 55266212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 5386385 - 5386444
Alignment:
Q  127 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttct 187  Q
    |||||||||||||||||||  ||||||  ||||| ||||||||||||||||||||| ||||    
T  5386385 agaaatgatatttgaacaaccatttttt-gacaactttctctctcatactcacattattct 5386444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 29227178 - 29227130
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  29227178 gttgtccaacaaattgtcacataaaaaggttgttcaaataacattgctc 29227130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 9095949 - 9096003
Alignment:
Q  127 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||| |||||| ||||| |||||||  ||||||||||||||||||||||||||    
T  9095949 agaaatgttatttgtacaattatttttgt-acaattttctctctcatactcacatt 9096003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 22813656 - 22813609
Alignment:
Q  252 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||||||| |||  |||||| ||||||||||||||    
T  22813656 ttgtccaacaagttgtcacaagaaaaagttgtttaaataacattgctc 22813609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 39605969 - 39606033
Alignment:
Q  116 aataatgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||| | ||||||||||||| |||||||  |||||||  |||| |||||||||||||||||||||    
T  39605969 aataataatagagaaatgatatatgaacaaccatttttg--acaactttctctctcatactcacatt 39606033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 43769720 - 43769778
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  43769720 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 43769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 28657502 - 28657445
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  28657502 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 28657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 37727117 - 37727059
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||| ||||| | ||||  || ||||| ||||||||||||||||||    
T  37727117 aagagaaatgatatttgtacaatcaattttttgataatttgctctctcatactcacatt 37727059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 39158135 - 39158177
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacattgttct 187  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||    
T  39158135 ataatttttgtgacaactttctctctcatactcacattattct 39158177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 49585023 - 49585061
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  49585023 aataatttttgggacaactttctctctcatactcacatt 49585061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 56557768 - 56557802
Alignment:
Q  150 ttttgcgacaattttctctctcatactcacattgt 184  Q
    ||||| |||||||||||||||||||||||||||||    
T  56557768 ttttgtgacaattttctctctcatactcacattgt 56557802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 149526 - 149489
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  149526 ataatttttgtgacaactttctctctcatactcacatt 149489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 1580342 - 1580288
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||| |||| | ||| ||  ||||||||||||||||||||||||||    
T  1580342 gagaaatgatatttgtacaacactttgtg--acaattttctctctcatactcacatt 1580288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 4106052 - 4106106
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcaca 180  Q
    ||||||||||||||||| |||||  |||||   ||||||||||||||||||||||||    
T  4106052 aagagaaatgatatttgtacaattttttttt--acaattttctctctcatactcaca 4106106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 4949516 - 4949572
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    ||||||||||||||||||||| | ||||  | ||||| ||||||||||||||||||||    
T  4949516 aagagaaatgatatttgaacattcatttg-gtgacaactttctctctcatactcacat 4949572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 7627878 - 7627915
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| || ||||||||||||||||||||||||    
T  7627878 ataatttttgtgataattttctctctcatactcacatt 7627915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 26207018 - 26206981
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  26207018 ataatttttgcaacaattttctctctcatattcacatt 26206981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 26600134 - 26600085
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    |||||||||||| ||||||||  |||  ||||||||||||||||||||||    
T  26600134 gttgtccaacaaattgtcacataaaaatgttgttcaaataacattgctca 26600085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 31657657 - 31657713
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  31657657 agagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 31657713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 41262384 - 41262347
Alignment:
Q  147 aatttttgcgacaattttctctctcatactcacattgt 184  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  41262384 aatttttgcaacaattttctctctcttactcacattgt 41262347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 50608683 - 50608629
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||| ||||||||||||| ||||||  ||||| ||||||| |||||||||||||    
T  50608683 gagaaattatatttgaacaattattttt--gacaactttctctttcatactcacatt 50608629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 29525999 - 29526047
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  29525999 gttgtccaacaagttgtcacaataaatggttgtacaaataacattgctc 29526047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 9753230 - 9753287
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 184  Q
    ||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||    
T  9753230 gagaaatgatatttgaacaatcatttt-gtgacaattttatctctcatactcacattgt 9753287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 34307476 - 34307426
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    ||||||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  34307476 gttgtccaataagttgtcacaagaaaggattgttcaaataacattgctcat 34307426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 4494172 - 4494124
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  4494172 gttgtccaacaagttgtcataagaaatggttgttcaaataacattgctc 4494124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 19148996 - 19149056
Alignment:
Q  120 atgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||||||| ||||||   | || |||||||||||||||||||||    
T  19148996 atgaaagagaaatgatatttgaacaatcattttt--tataactttctctctcatactcacatt 19149056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 35377141 - 35377086
Alignment:
Q  127 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||| || ||||| ||||| ||||||||||| |||||||||    
T  35377141 agaaatgatatttgaacaacaacttttgtgacaactttctctctcacactcacatt 35377086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 50745557 - 50745615
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  50745557 aaagagaaatgatatttgtacaatcatttttg-tacaactttctctctcatactcacatt 50745615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 38671647 - 38671689
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacattgttct 187  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  38671647 ataatttttgtgacaattttctctctcgtactcacattgttct 38671689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 3281778 - 3281720
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||| | | ||||| ||||| ||||||||| |||||||||||    
T  3281778 aaagagaaatgatatttgaacattta-ttttgtgacaactttctctcttatactcacatt 3281720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 261 - 296
Target Start/End: Complemental strand, 27168607 - 27168572
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattg 296  Q
    ||||||||| ||||||||||||||||||||||||||    
T  27168607 aagttgtcataataaagggttgttcaaataacattg 27168572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 47683800 - 47683858
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgt 184  Q
    |||||||||||||||| ||||  ||||| | ||||| |||||||||||||||||||||||    
T  47683800 agagaaatgatatttgtacaaccatttt-gtgacaactttctctctcatactcacattgt 47683858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 49361898 - 49361840
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||| ||||| |||||||  |||| ||| |||||||||||||||||    
T  49361898 aaagagaaatgatatttgtacaatcatttttg-tacaactttttctctcatactcacatt 49361840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 49761316 - 49761374
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  49761316 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 49761374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 10464975 - 10465009
Alignment:
Q  147 aatttttgcgacaattttctctctcatactcacat 181  Q
    |||||||| ||||||||||||||||||||||||||    
T  10464975 aatttttgtgacaattttctctctcatactcacat 10465009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 29846953 - 29846896
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  29846953 aagagaaatgatatttgtacaaccatttttgt-acaactttctctctcatactcacatt 29846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 3953516 - 3953479
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  3953516 ataatttttgtgacaactttctctctcatactcacatt 3953479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 24095447 - 24095410
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  24095447 ataatttttgtgacaactttctctctcatactcacatt 24095410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 24256830 - 24256780
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactca 178  Q
    ||||||||||||||||||||| ||||||  ||||| ||||||| |||||||||    
T  24256830 gagaaatgatatttgaacaatcattttt--gacaaatttctctatcatactca 24256780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 28700471 - 28700527
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||  ||||||  ||||| ||| |||||||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttt-tgacaactttatctctcatactcacatt 28700527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 35368621 - 35368677
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||| ||||  |||||||  |||| |||||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgt-acaactttctctctcatactcacatt 35368677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 38470626 - 38470597
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttt 152  Q
    ||||||||||||||||||||||||||||||    
T  38470626 aaagagaaatgatatttgaacaataatttt 38470597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 39713972 - 39713927
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 296  Q
    |||||||||||| || |||||| ||| |||||||||||||||||||    
T  39713972 gttgtccaacaaattatcacaaaaaatggttgttcaaataacattg 39713927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 50314654 - 50314691
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  50314654 ataactttttcgacaattttctctctcatactcacatt 50314691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 33451499 - 33451452
Alignment:
Q  252 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  33451499 ttgtctaacaagttgtcacaagaaagggttgttcaaataacattgctc 33451452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 1068742 - 1068790
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  1068742 gttgtccaacaagttgtcacataaaaaggttgttcaaataacattgctc 1068790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 7010684 - 7010739
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||    
T  7010684 agagaaatgatatttgtacaatcatttttt-gacaattttctctctcatactcacat 7010739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 9963694 - 9963752
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctc-tcatactcacatt 182  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||| |||||||||||||    
T  9963694 aagagaaatgatatttgtacaataattttt-tgacaattttctctcatcatactcacatt 9963752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 42652739 - 42652778
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  42652739 aagttgtcacaataaagagttgttcaaataacattgctca 42652778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 40413412 - 40413348
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 188  Q
    |||||||||||||||||| ||||| ||||| | ||||| |||||||||||||||||| || |||||    
T  40413412 aaagagaaatgatatttgtacaattatttt-gtgacaactttctctctcatactcacgttattctc 40413348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 6243045 - 6243100
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgt-acaactttctctctcatactcacatt 6243100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 15716911 - 15716863
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||  |||  |||||||||||||||||||||    
T  15716911 gttgtccaacaagttgtcacataaaaaagttgttcaaataacattgctc 15716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 33107802 - 33107754
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  33107802 gttgtccaacaaattgtcacataaaaaggttgttcaaataacattgctc 33107754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 34435672 - 34435624
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||| |||||||||||||||  ||| ||||||||||||||||||||||    
T  34435672 gttgtgcaacaagttgtcacataaaaaggttgttcaaataacattgctc 34435624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 44091022 - 44091070
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||||||    
T  44091022 gttgtccaaaaagttgtcacatgaaaaggttgttcaaataacattgctc 44091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 14710956 - 14710898
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||| |||||||||||| ||||| ||||| | ||||| |||||||||||||||||||||    
T  14710956 aaagataaatgatatttgtacaatcatttt-gtgacaactttctctctcatactcacatt 14710898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 298
Target Start/End: Complemental strand, 36874032 - 36874001
Alignment:
Q  267 tcacaataaagggttgttcaaataacattgct 298  Q
    ||||||||||||||||||||||||||||||||    
T  36874032 tcacaataaagggttgttcaaataacattgct 36874001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 39211054 - 39211108
Alignment:
Q  127 agaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||  ||||||  ||||| |||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccatttttt-gacaactttctctctcatactcacatt 39211108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 17823469 - 17823520
Alignment:
Q  128 gaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    ||||||||||||||||||  ||||||  ||||||||| ||||||||||||||||    
T  17823469 gaaatgatatttgaacaa--atttttatgacaattttttctctcatactcacat 17823520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 28756564 - 28756602
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  28756564 aataatttttgtgacaattttatctctcatactcacatt 28756602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 30439567 - 30439510
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  30439567 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 30439510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 37392190 - 37392133
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  37392190 aagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 37392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 8645195 - 8645228
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  8645195 ataatttttgggacaattttctctctcatactca 8645228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 11134720 - 11134769
Alignment:
Q  252 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    |||||||||||||| |||||| |||   ||||||||||||||||||||||    
T  11134720 ttgtccaacaagttatcacaagaaatatttgttcaaataacattgctcat 11134769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 34435773 - 34435736
Alignment:
Q  150 ttttgcgacaattttctctctcatactcacattgttct 187  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  34435773 ttttgtgacaattttctctctcatacacacattgttct 34435736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 182
Target Start/End: Complemental strand, 38939254 - 38939194
Alignment:
Q  121 tgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||  ||||  |||||||  |||| |||||||||||||||||||||    
T  38939254 tgaaagagaaatgatatttctacaactatttttgt-acaactttctctctcatactcacatt 38939194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 41520998 - 41521035
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  41520998 ataacttttgcaacaattttctctctcatactcacatt 41521035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 26481015 - 26480977
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26481015 aagttgtcacaataaagggttgttcaaataacattgctc 26480977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 466 - 512
Target Start/End: Original strand, 41265762 - 41265808
Alignment:
Q  466 aatgtgaatgtaaatgtcttaatttatacacgaaacaagattaattt 512  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  41265762 aatgtgaatgtatatgtcttaatttatacacggaacaagattaattt 41265808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 44239172 - 44239222
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  44239172 gttgtccaaaaaattgtcacaataaatggttgttcaaataacattgctcat 44239222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 2427934 - 2427885
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  2427934 gttgtccaacaaattgtcacaaaaaatggttgttcaaataacattgctca 2427885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 11965929 - 11965982
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcattgg 304  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||| ||||    
T  11965929 gttgtccaacaagttgtcacataaaaaggttgttcaaataacattgctctttgg 11965982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 42607592 - 42607536
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    ||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||    
T  42607592 aagagaaatgatatttgtacaattatttt-gtgacaattttctctctcatactcacat 42607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 6049408 - 6049349
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||| |||  ||||||| || || |||||||||||||||||||||    
T  6049408 aaagagaaatgatatttgatcaaccatttttgtgataactttctctctcatactcacatt 6049349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 10711733 - 10711791
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||   ||||| | |||||||||||||||||||||||||||    
T  10711733 aaagagaaatgatatttgaacatctatttt-gtgacaattttctctctcatactcacatt 10711791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 37731135 - 37731086
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    ||||| |||||||||||||||  ||| |||||||||||||||||||||||    
T  37731135 gttgtgcaacaagttgtcacataaaaaggttgttcaaataacattgctca 37731086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 37738036 - 37737982
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||  |||||  |||||| |||||||||||||||||||||    
T  37738036 gagaaatgatatttgaacaaccatttt--cgacaactttctctctcatactcacatt 37737982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 14877125 - 14877169
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 295  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  14877125 gttgtctaacaagttgtcacaagaaatggttgttcaaataacatt 14877169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 31578570 - 31578618
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||| ||| | ||||||||||| ||||||||    
T  31578570 gttgtccaacaagttgtcacaagaaatgattgttcaaatatcattgctc 31578618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 37316750 - 37316702
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  37316750 gttgtccaacaagttgtcatagaaaaaggttgttcaaataacattgctc 37316702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 13265975 - 13266029
Alignment:
Q  127 agaaatgatatttgaacaata--atttttgcgacaattttctctctcatactcac 179  Q
    |||||||||||||| |||| |  |||||||| |||||||||||||||||||||||    
T  13265975 agaaatgatatttgtacaacacaatttttgcaacaattttctctctcatactcac 13266029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 153
Target Start/End: Complemental strand, 17569780 - 17569749
Alignment:
Q  122 gaaagagaaatgatatttgaacaataattttt 153  Q
    ||||||||||||||||||||||||||||||||    
T  17569780 gaaagagaaatgatatttgaacaataattttt 17569749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 19916684 - 19916727
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacattgttct 187  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||    
T  19916684 aataatttttgtgacaactttctctctcatacacacattgttct 19916727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 37003643 - 37003682
Alignment:
Q  148 atttttgcgacaattttctctctcatactcacattgttct 187  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  37003643 atttttgtgacaactttctctctcatactcacattgttct 37003682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 6646832 - 6646889
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    ||||||||||||||||||||||   ||||| | ||||| ||||||||||||||||||||    
T  6646832 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacat 6646889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 21738658 - 21738620
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  21738658 aataatttttgtgataattttctctctcatactcacatt 21738620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 40210110 - 40210072
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  40210110 aataatttttgtgacaactttctctctcatactcacatt 40210072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 22296190 - 22296134
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||| ||||  |||||||  |||||||||||||| |||||||||||    
T  22296190 agagaaatgatatttgtacaaccatttttgt-acaattttctctctgatactcacatt 22296134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 22353236 - 22353180
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||| ||||| ||||| | ||||| ||||| |||||||||||||||    
T  22353236 agagaaatgatatttgtacaatcatttt-gtgacaactttctttctcatactcacatt 22353180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 37731236 - 37731199
Alignment:
Q  150 ttttgcgacaattttctctctcatactcacattgttct 187  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  37731236 ttttgtgacaattttctctctcatacacacattgttct 37731199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 4213218 - 4213256
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4213218 aagttgtcacaataaagggttgttcaaataacattgctc 4213256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 7918997 - 7918953
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacatt 295  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||    
T  7918997 gttgtctaacaagttgtcacaagaaagggttgttcaaataacatt 7918953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 47398511 - 47398456
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||    
T  47398511 gagaaatgatatttgaacattcatttttt-gacaattttctctctcatactcacatt 47398456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 47642542 - 47642494
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  47642542 gttgtccaacaagttgtcccaaaaaatggttgttcaaataacattgctc 47642494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 48983603 - 48983555
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||||||||||| |||||| | |||||||||||||    
T  48983603 gttgtccaacaagttgtcacaataaatggttgtaccaataacattgctc 48983555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 38878836 - 38878785
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcatt 302  Q
    |||||||||||||||||||||  |||  ||||||||||||||||||||||||    
T  38878836 gttgtccaacaagttgtcacataaaaatgttgttcaaataacattgctcatt 38878785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 50797788 - 50797845
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    |||||||||||||||||| ||||| ||||| | ||||| ||||||||||||||||||||    
T  50797788 aaagagaaatgatatttgtacaatcatttt-gtgacaactttctctctcatactcacat 50797845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 181
Target Start/End: Original strand, 8846003 - 8846039
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacat 181  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8846003 ataatttttgtgacaattttctctctcatactcacat 8846039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 18336158 - 18336213
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||| | ||||| | ||||| |||||||||||||||||||||    
T  18336158 gagaaatgatatttgaacattcatttt-gtgacaactttctctctcatactcacatt 18336213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 27742745 - 27742793
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||||    
T  27742745 gttgtccaacaagttgttacataaaaaggttgttcaaataacattgctc 27742793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 40439775 - 40439727
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||| ||||||||  ||| ||||||||||||||||||||||    
T  40439775 gttgtccaacaaattgtcacataaaaaggttgttcaaataacattgctc 40439727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 42468728 - 42468776
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||| ||||||||| ||| ||||||||||||| ||||||||    
T  42468728 gttgtccaacaaattgtcacaagaaatggttgttcaaatatcattgctc 42468776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 51718687 - 51718631
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||  ||||||   |||| |||||||||||||||||||||    
T  51718687 gagaaatgatatttgaacaaccatttttttcacaactttctctctcatactcacatt 51718631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 8200084 - 8200142
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  8200084 aaagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 8200142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 11121489 - 11121547
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||| |||| || |||||  |||| |||||||||||||||||||||    
T  11121489 aaagagaaatgatatttgtacaacaacttttgt-acaactttctctctcatactcacatt 11121547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 38303751 - 38303692
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||  || |||| | |||| |||||||||||||||| ||||    
T  38303751 aaagagaaatgatatttgaacatcaacttttacaacaactttctctctcatactcgcatt 38303692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 40596117 - 40596059
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||| ||||  ||||| | ||||| |||||||||||||||||||||    
T  40596117 aaagagaaatgatatttgtacaaccatttt-gtgacaactttctctctcatactcacatt 40596059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 48325841 - 48325783
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||| ||||  ||||| | ||||||||||| |||||||||||||||    
T  48325841 aaagagaaatgatatttgtacaaccatttt-gtgacaattttctatctcatactcacatt 48325783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 611698 - 611641
Alignment:
Q  123 aaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacat 181  Q
    |||||||||||||||||||||||| | ||||| || |||||||||||||| | ||||||    
T  611698 aaagagaaatgatatttgaacaatca-ttttgggataattttctctctcaaattcacat 611641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 4213102 - 4213144
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacattgttct 187  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||    
T  4213102 ataacttttgtgacaactttctctctcatactcacattgttct 4213144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 4857921 - 4857982
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttct 187  Q
    |||||||||||||||||||||| | ||||  ||||| |||||||||||| | |||||||||||    
T  4857921 agagaaatgatatttgaacaatcactttt-tgacaactttctctctcatgcacacattgttct 4857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 33358220 - 33358163
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  33358220 aagagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 33358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 37690429 - 37690490
Alignment:
Q  126 gagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacattgttctc 188  Q
    ||||||||||||||| ||||| | |||   ||||||||||||||||||||||||||| |||||    
T  37690429 gagaaatgatatttgtacaatcactttat-gacaattttctctctcatactcacattattctc 37690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 48103453 - 48103398
Alignment:
Q  121 tgaaagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactca 178  Q
    ||||||||||||||||||||||||  | | |||| ||||| |||||||||||||||||    
T  48103453 tgaaagagaaatgatatttgaaca--actatttgtgacaactttctctctcatactca 48103398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 52437523 - 52437561
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  52437523 aataatttttgtgacaactttctctctcatactcacatt 52437561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 5771789 - 5771752
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  5771789 ataatttttgtgacaactttctctctcatactcacatt 5771752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 40328782 - 40328745
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||||| || ||||||||||||||||||||||||    
T  40328782 ataatttttgtgataattttctctctcatactcacatt 40328745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 46281465 - 46281502
Alignment:
Q  144 aataatttttgcgacaattttctctctcatactcacat 181  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  46281465 aataatttttgtgacaactttctctctcatactcacat 46281502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 48220204 - 48220148
Alignment:
Q  125 agagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||   ||||| | ||||| |||||||||||||||||||||    
T  48220204 agagaaatgatatttgaacatccatttt-gtgacaactttctctctcatactcacatt 48220148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 48858959 - 48859008
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    ||||||||| | |||||||||| ||| ||||||||| |||||||||||||    
T  48858959 gttgtccaaaaggttgtcacaagaaatggttgttcatataacattgctca 48859008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 50824771 - 50824804
Alignment:
Q  145 ataatttttgcgacaattttctctctcatactca 178  Q
    |||||||||| |||||||||||||||||||||||    
T  50824771 ataatttttgtgacaattttctctctcatactca 50824804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 17182244 - 17182284
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  17182244 aagttgtcataataaagggttgttcaaataacattgctcat 17182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 461 - 512
Target Start/End: Original strand, 34260975 - 34261026
Alignment:
Q  461 tatggaatgtgaatgtaaatgtcttaatttatacacgaaacaagattaattt 512  Q
    |||| |||||||||||| |||||||||||||||||||  |||||||||||||    
T  34260975 tatgaaatgtgaatgtatatgtcttaatttatacacgggacaagattaattt 34261026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 1287059 - 1287097
Alignment:
Q  261 aagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1287059 aagttgtcacaataaaggattgttcaaataacattgctc 1287097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 33712456 - 33712504
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||||    
T  33712456 gttgtccaacaagttgttacataaaaaggttgttcaaataacattgctc 33712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 182
Target Start/End: Complemental strand, 5570373 - 5570338
Alignment:
Q  147 aatttttgcgacaattttctctctcatactcacatt 182  Q
    |||||||| |||||||||||||||||||||||||||    
T  5570373 aatttttgtgacaattttctctctcatactcacatt 5570338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 299
Target Start/End: Complemental strand, 5739698 - 5739651
Alignment:
Q  252 ttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    |||||||||||||||||| || ||| || |||||||||||||||||||    
T  5739698 ttgtccaacaagttgtcataagaaatggatgttcaaataacattgctc 5739651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 8645444 - 8645494
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctcat 301  Q
    ||||||||| | |||||||||| ||| ||||||||||||| ||||||||||    
T  8645444 gttgtccaaaaggttgtcacaagaaatggttgttcaaatatcattgctcat 8645494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 34442099 - 34442065
Alignment:
Q  150 ttttgcgacaattttctctctcatactcacattgt 184  Q
    ||||| |||||||||||||||||||||||||||||    
T  34442099 ttttgtgacaattttctctctcatactcacattgt 34442065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 18065025 - 18064980
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattg 296  Q
    |||||||||||||||||||||  |||  ||||||||||||||||||    
T  18065025 gttgtccaacaagttgtcacataaaaaagttgttcaaataacattg 18064980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 23086 - 23143
Alignment:
Q  126 gagaaatgatatttgaaca-ataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||| ||||| | ||||||||| |||||||||||||||||| |||||||    
T  23086 gagaaatgatattcgaacatacaatttttgcaacaattttctctctcatattcacatt 23143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 8608 - 8657
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctca 300  Q
    |||||| ||||||||||||||| |||  ||||||||||||||||||||||    
T  8608 gttgtctaacaagttgtcacaagaaatagttgttcaaataacattgctca 8657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 8888 - 8840
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||| |||||||||||  ||| ||||||||||||||||||||||    
T  8888 gttgtccaaaaagttgtcacatgaaaaggttgttcaaataacattgctc 8840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 124 - 182
Target Start/End: Original strand, 1656 - 1711
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||||||||    ||||| |||||||||||||||||||||| ||||    
T  1656 aagagaaatgatatttgaacaac---ttttgtgacaattttctctctcatactctcatt 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 13492 - 13444
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||| |||||||||||| |||| |||||| ||||||||||||||    
T  13492 gttgtccaataagttgtcacaaaaaagagttgtttaaataacattgctc 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 59352 - 59400
Alignment:
Q  251 gttgtccaacaagttgtcacaataaagggttgttcaaataacattgctc 299  Q
    ||||||||| |||||||||||| |||| |||||| ||||||||||||||    
T  59352 gttgtccaataagttgtcacaaaaaagagttgtttaaataacattgctc 59400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 101830 - 101790
Alignment:
Q  257 caacaagttgtcacaataaagggttgttcaaataacattgc 297  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  101830 caacaagttgtcacaagaaagggttgtgcaaataacattgc 101790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 182
Target Start/End: Complemental strand, 31662 - 31605
Alignment:
Q  124 aagagaaatgatatttgaacaataatttttgcgacaattttctctctcatactcacatt 182  Q
    ||||||||||||||||| ||||  ||||||  ||||| |||||||||||||||||||||    
T  31662 aagagaaatgatatttgtacaaccatttttt-gacaactttctctctcatactcacatt 31605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University