View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3142_high_8 (Length: 345)
Name: NF3142_high_8
Description: NF3142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3142_high_8 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 11 - 329
Target Start/End: Original strand, 32946834 - 32947153
Alignment:
| Q |
11 |
gatgaaatgttttgttgaaaattgctagttatcgcgaaatataacctcacgaaaatttacgagcctctatttgtttgttaaatatctttcataaactata |
110 |
Q |
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| T |
32946834 |
gatgaaatattttgttgaaaattgctagttatcgcgaaatataacctcacgaaaatttatgagcctctatttgtttgttaaatatctttcataaactata |
32946933 |
T |
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| Q |
111 |
ccatgacctcccttattttccatctagctaggaagaaatttaatcggctaaatatttttcgttatccgttcaggataaattctcttcggataaatagcaa |
210 |
Q |
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| T |
32946934 |
ccatgacctcccttattttccatctagctaggaagaaatttaatcggctaaatatttttcgttatccgttcaggataaattctcttcggataaatagcaa |
32947033 |
T |
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| Q |
211 |
tgttctagaaagaagattgttaaactctagggt-tnnnnnnnnnnnnnnnctaatgcatgattttagtaagttgttgctatccacaagagtttaggtggc |
309 |
Q |
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| T |
32947034 |
tgttctagaaagaagattgttaaactctagggtaaaaaaaataaaaaaaactaatgcatgattttaggaagttgttgctatccacaagagtttaggtggc |
32947133 |
T |
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| Q |
310 |
gtgcatatataggttgtctc |
329 |
Q |
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|||||||||||||||||||| |
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| T |
32947134 |
gtgcatatataggttgtctc |
32947153 |
T |
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