View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3144A-Insertion-2 (Length: 775)

Name: NF3144A-Insertion-2
Description: NF3144A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3144A-Insertion-2
NF3144A-Insertion-2
[»] chr1 (44 HSPs)
chr1 (227-602)||(18583423-18583796)
chr1 (227-602)||(23442645-23443018)
chr1 (227-602)||(33611289-33611662)
chr1 (241-602)||(49786190-49786548)
chr1 (241-602)||(34162600-34162960)
chr1 (245-590)||(41584556-41584904)
chr1 (227-602)||(17000287-17000659)
chr1 (242-535)||(32817557-32817848)
chr1 (253-602)||(42545901-42546248)
chr1 (253-590)||(15069732-15070068)
chr1 (315-602)||(49677478-49677763)
chr1 (296-590)||(45046741-45047033)
chr1 (253-600)||(40650556-40650902)
chr1 (242-602)||(40907813-40908171)
chr1 (283-590)||(7011172-7011478)
chr1 (303-602)||(28866509-28866806)
chr1 (283-557)||(44573021-44573292)
chr1 (253-602)||(45567769-45568103)
chr1 (227-492)||(32542313-32542563)
chr1 (307-602)||(34006246-34006541)
chr1 (419-602)||(52744722-52744905)
chr1 (302-602)||(26723367-26723660)
chr1 (245-598)||(6223634-6223972)
chr1 (227-403)||(30829541-30829707)
chr1 (227-403)||(24471389-24471556)
chr1 (242-590)||(38885161-38885481)
chr1 (416-600)||(27794925-27795108)
chr1 (241-403)||(43319271-43319434)
chr1 (419-602)||(24472706-24472889)
chr1 (418-590)||(3561226-3561398)
chr1 (418-590)||(42928980-42929152)
chr1 (459-601)||(25563294-25563436)
chr1 (227-359)||(27794762-27794893)
chr1 (242-359)||(52744937-52745054)
chr1 (241-403)||(38950202-38950353)
chr1 (417-512)||(890609-890704)
chr1 (417-528)||(9446048-9446159)
chr1 (445-521)||(9445846-9445922)
chr1 (416-527)||(26230145-26230256)
chr1 (545-598)||(890748-890801)
chr1 (312-403)||(800877-800969)
chr1 (445-521)||(43318940-43319016)
chr1 (458-521)||(800552-800615)
chr1 (495-590)||(45880000-45880095)
[»] chr7 (47 HSPs)
chr7 (227-602)||(47202401-47202767)
chr7 (237-601)||(3304638-3305001)
chr7 (230-600)||(31642951-31643318)
chr7 (286-601)||(8154865-8155178)
chr7 (242-590)||(42925531-42925878)
chr7 (242-602)||(3936030-3936388)
chr7 (227-570)||(28230379-28230718)
chr7 (227-602)||(36468416-36468786)
chr7 (227-521)||(24042148-24042439)
chr7 (241-602)||(33573922-33574277)
chr7 (241-602)||(36629125-36629483)
chr7 (8-170)||(21110953-21111115)
chr7 (296-599)||(36408347-36408648)
chr7 (253-602)||(19225477-19225825)
chr7 (283-600)||(9151777-9152074)
chr7 (253-543)||(37518233-37518521)
chr7 (421-602)||(42864981-42865162)
chr7 (242-586)||(33151129-33151467)
chr7 (314-598)||(31985400-31985685)
chr7 (417-590)||(1518802-1518975)
chr7 (319-599)||(24690215-24690494)
chr7 (259-402)||(43737063-43737207)
chr7 (442-590)||(19818500-19818648)
chr7 (419-602)||(36946171-36946353)
chr7 (477-590)||(43737237-43737350)
chr7 (469-600)||(7115151-7115282)
chr7 (416-559)||(5278358-5278501)
chr7 (227-463)||(6467603-6467839)
chr7 (242-375)||(42877149-42877282)
chr7 (423-601)||(6467020-6467198)
chr7 (510-598)||(26555040-26555128)
chr7 (417-550)||(16983673-16983806)
chr7 (424-590)||(48776100-48776268)
chr7 (12-104)||(18658141-18658233)
chr7 (248-346)||(28346076-28346173)
chr7 (417-512)||(48775705-48775798)
chr7 (495-601)||(37398771-37398877)
chr7 (419-581)||(48705899-48706061)
chr7 (427-536)||(43185887-43185996)
chr7 (241-336)||(28349227-28349322)
chr7 (423-602)||(39581840-39582019)
chr7 (306-389)||(26555131-26555214)
chr7 (417-514)||(8214257-8214354)
chr7 (459-520)||(8214462-8214523)
chr7 (529-602)||(37518142-37518215)
chr7 (227-271)||(47203105-47203149)
chr7 (54-96)||(21129987-21130029)
[»] chr8 (46 HSPs)
chr8 (255-602)||(31519771-31520116)
chr8 (227-599)||(21004297-21004661)
chr8 (242-590)||(3094603-3094953)
chr8 (242-590)||(8885344-8885690)
chr8 (241-602)||(44106144-44106503)
chr8 (264-602)||(27927820-27928156)
chr8 (253-586)||(42280786-42281120)
chr8 (256-602)||(28916719-28917055)
chr8 (227-514)||(37248466-37248750)
chr8 (242-600)||(9073426-9073782)
chr8 (300-602)||(34853309-34853608)
chr8 (247-514)||(16310526-16310791)
chr8 (333-513)||(40994805-40994983)
chr8 (417-602)||(36165716-36165902)
chr8 (417-602)||(11698195-11698380)
chr8 (417-590)||(14163948-14164121)
chr8 (417-602)||(17119758-17119943)
chr8 (417-601)||(40392631-40392815)
chr8 (440-601)||(40328015-40328176)
chr8 (442-600)||(36980689-36980847)
chr8 (227-403)||(41530576-41530754)
chr8 (425-589)||(1076659-1076822)
chr8 (242-403)||(36404231-36404391)
chr8 (419-590)||(4259528-4259697)
chr8 (417-598)||(36317887-36318072)
chr8 (227-403)||(7971072-7971249)
chr8 (424-586)||(28423523-28423684)
chr8 (424-602)||(6395186-6395364)
chr8 (302-389)||(35676628-35676715)
chr8 (422-590)||(8621528-8621697)
chr8 (314-380)||(11698385-11698451)
chr8 (465-590)||(34645520-34645645)
chr8 (416-574)||(39093602-39093760)
chr8 (422-514)||(7982478-7982570)
chr8 (445-513)||(31234486-31234554)
chr8 (417-521)||(33472166-33472270)
chr8 (417-521)||(33472373-33472477)
chr8 (445-528)||(10833468-10833551)
chr8 (459-528)||(9845323-9845392)
chr8 (426-589)||(7981618-7981781)
chr8 (421-521)||(10840717-10840817)
chr8 (417-502)||(9845488-9845573)
chr8 (465-509)||(24627717-24627761)
chr8 (227-271)||(31519383-31519427)
chr8 (236-295)||(40994735-40994794)
chr8 (459-509)||(41530812-41530862)
[»] chr3 (58 HSPs)
chr3 (227-602)||(2358501-2358876)
chr3 (245-598)||(47301944-47302294)
chr3 (241-602)||(50716173-50716533)
chr3 (241-602)||(50796314-50796674)
chr3 (242-590)||(3902697-3903043)
chr3 (227-602)||(52777148-52777511)
chr3 (227-602)||(43472848-43473201)
chr3 (245-602)||(28872928-28873286)
chr3 (242-601)||(35141999-35142353)
chr3 (253-602)||(47739812-47740158)
chr3 (245-590)||(501032-501375)
chr3 (227-506)||(3937295-3937563)
chr3 (242-602)||(38977627-38977985)
chr3 (241-590)||(51258324-51258672)
chr3 (308-602)||(34821222-34821514)
chr3 (240-601)||(3351946-3352306)
chr3 (242-570)||(51540525-51540853)
chr3 (241-602)||(49096105-49096464)
chr3 (254-590)||(46622686-46623010)
chr3 (301-602)||(39149791-39150089)
chr3 (245-601)||(30721690-30722044)
chr3 (284-532)||(33438486-33438731)
chr3 (432-590)||(47123136-47123294)
chr3 (227-389)||(48303898-48304060)
chr3 (432-590)||(47130502-47130660)
chr3 (497-602)||(3938357-3938462)
chr3 (425-598)||(5127782-5127955)
chr3 (253-365)||(34821510-34821622)
chr3 (416-588)||(40062473-40062645)
chr3 (459-602)||(35345788-35345931)
chr3 (417-602)||(51492894-51493080)
chr3 (465-590)||(46624863-46624988)
chr3 (253-403)||(45244322-45244469)
chr3 (253-349)||(47123039-47123135)
chr3 (253-349)||(47130405-47130501)
chr3 (423-589)||(29048444-29048610)
chr3 (241-336)||(42936590-42936685)
chr3 (424-590)||(47979895-47980063)
chr3 (417-602)||(54229776-54229961)
chr3 (417-590)||(14828809-14828983)
chr3 (419-590)||(47769359-47769530)
chr3 (485-602)||(4300159-4300276)
chr3 (525-590)||(33439384-33439449)
chr3 (417-512)||(45712053-45712148)
chr3 (424-546)||(27143351-27143473)
chr3 (418-510)||(26053491-26053584)
chr3 (417-536)||(29035893-29036013)
chr3 (305-356)||(42936685-42936736)
chr3 (241-336)||(33701457-33701554)
chr3 (459-521)||(8735530-8735592)
chr3 (459-521)||(9087771-9087833)
chr3 (241-336)||(33700678-33700774)
chr3 (227-271)||(2358110-2358154)
chr3 (227-271)||(3938805-3938849)
chr3 (457-521)||(33842034-33842098)
chr3 (417-488)||(29035809-29035880)
chr3 (446-509)||(45244514-45244577)
chr3 (427-536)||(46555445-46555554)
[»] chr4 (59 HSPs)
chr4 (227-602)||(32441726-32442098)
chr4 (227-601)||(6228693-6229063)
chr4 (227-601)||(34972789-34973151)
chr4 (241-601)||(49396937-49397299)
chr4 (227-601)||(55052498-55052870)
chr4 (241-598)||(6003556-6003911)
chr4 (253-602)||(25491274-25491621)
chr4 (242-590)||(19835450-19835796)
chr4 (240-598)||(38536098-38536455)
chr4 (262-589)||(48318956-48319281)
chr4 (253-602)||(40703604-40703952)
chr4 (242-599)||(17933019-17933374)
chr4 (227-590)||(2505922-2506285)
chr4 (241-602)||(25752322-25752685)
chr4 (326-602)||(41412977-41413252)
chr4 (227-478)||(23523821-23524071)
chr4 (301-602)||(46440151-46440452)
chr4 (242-589)||(7931591-7931931)
chr4 (227-575)||(3703155-3703502)
chr4 (307-602)||(8106387-8106682)
chr4 (421-600)||(53893906-53894085)
chr4 (341-590)||(31582313-31582560)
chr4 (242-468)||(29822550-29822773)
chr4 (241-389)||(25539038-25539186)
chr4 (487-602)||(54631371-54631486)
chr4 (444-602)||(52089315-52089473)
chr4 (253-454)||(54631489-54631689)
chr4 (426-590)||(27742004-27742169)
chr4 (441-590)||(41322983-41323132)
chr4 (417-590)||(7863544-7863717)
chr4 (441-586)||(25538873-25539019)
chr4 (253-362)||(53894108-53894217)
chr4 (267-389)||(38416520-38416642)
chr4 (227-359)||(50392529-50392662)
chr4 (424-590)||(14474103-14474268)
chr4 (509-598)||(29822775-29822864)
chr4 (417-558)||(27879651-27879792)
chr4 (465-602)||(47456751-47456888)
chr4 (417-559)||(37222064-37222206)
chr4 (542-602)||(38417020-38417080)
chr4 (523-590)||(49001451-49001518)
chr4 (227-305)||(41413249-41413327)
chr4 (418-548)||(42497809-42497939)
chr4 (8-96)||(39132661-39132749)
chr4 (419-513)||(49002822-49002916)
chr4 (417-521)||(25140466-25140570)
chr4 (417-509)||(25140687-25140779)
chr4 (427-514)||(47784101-47784188)
chr4 (457-541)||(47873953-47874037)
chr4 (495-598)||(55838875-55838978)
chr4 (459-509)||(25140894-25140944)
chr4 (543-595)||(4936614-4936666)
chr4 (495-591)||(55774704-55774800)
chr4 (495-558)||(1788175-1788238)
chr4 (424-490)||(38416937-38417004)
chr4 (477-536)||(39118308-39118367)
chr4 (241-307)||(42660430-42660496)
chr4 (485-598)||(20078719-20078832)
chr4 (469-570)||(46381079-46381180)
[»] chr5 (64 HSPs)
chr5 (227-602)||(4064598-4064971)
chr5 (242-590)||(6156615-6156961)
chr5 (242-590)||(15799109-15799455)
chr5 (241-602)||(33487493-33487853)
chr5 (243-602)||(20891497-20891855)
chr5 (227-602)||(12464998-12465355)
chr5 (245-590)||(38871558-38871901)
chr5 (227-516)||(26190263-26190550)
chr5 (242-602)||(38692662-38693020)
chr5 (254-590)||(39524672-39525006)
chr5 (245-602)||(15957637-15957991)
chr5 (253-590)||(28083269-28083604)
chr5 (302-590)||(32841861-32842149)
chr5 (314-602)||(31221218-31221504)
chr5 (242-590)||(37183672-37184019)
chr5 (241-601)||(24203564-24203918)
chr5 (253-601)||(40619865-40620216)
chr5 (283-602)||(38372234-38372543)
chr5 (329-601)||(29862583-29862854)
chr5 (242-602)||(31929004-31929342)
chr5 (241-503)||(25746910-25747168)
chr5 (227-403)||(26318987-26319163)
chr5 (227-590)||(27212577-27212934)
chr5 (417-602)||(7884250-7884435)
chr5 (227-403)||(37094991-37095165)
chr5 (437-602)||(14111944-14112107)
chr5 (302-602)||(26095035-26095334)
chr5 (417-602)||(12847500-12847685)
chr5 (417-590)||(13908605-13908778)
chr5 (231-403)||(34440617-34440779)
chr5 (241-403)||(36359661-36359824)
chr5 (417-602)||(23269391-23269579)
chr5 (420-590)||(27158144-27158314)
chr5 (494-590)||(26898694-26898790)
chr5 (312-402)||(14111851-14111942)
chr5 (228-403)||(38640590-38640767)
chr5 (304-407)||(8032217-8032321)
chr5 (417-600)||(40613556-40613739)
chr5 (417-586)||(41639385-41639557)
chr5 (423-528)||(21070429-21070534)
chr5 (416-528)||(8738938-8739050)
chr5 (424-590)||(6800818-6800984)
chr5 (536-602)||(26190201-26190267)
chr5 (417-511)||(27494123-27494217)
chr5 (495-601)||(33901094-33901200)
chr5 (417-521)||(16429339-16429443)
chr5 (416-532)||(26093502-26093618)
chr5 (417-600)||(26622170-26622350)
chr5 (419-521)||(8739148-8739250)
chr5 (417-501)||(1350290-1350374)
chr5 (419-590)||(41253359-41253530)
chr5 (459-521)||(28445169-28445231)
chr5 (246-359)||(34529913-34530029)
chr5 (499-580)||(7036677-7036758)
chr5 (253-359)||(43388189-43388297)
chr5 (445-512)||(34530300-34530367)
chr5 (459-521)||(8973569-8973631)
chr5 (227-292)||(1350451-1350516)
chr5 (422-559)||(11186097-11186234)
chr5 (456-528)||(16429168-16429240)
chr5 (445-505)||(28445381-28445441)
chr5 (253-331)||(28108277-28108354)
chr5 (237-271)||(38030765-38030799)
chr5 (459-509)||(38641033-38641083)
[»] chr2 (40 HSPs)
chr2 (241-570)||(36948851-36949178)
chr2 (242-602)||(32187743-32188102)
chr2 (259-601)||(39447101-39447441)
chr2 (242-590)||(33452329-33452675)
chr2 (245-602)||(15994987-15995343)
chr2 (253-570)||(44465633-44465949)
chr2 (296-601)||(41510304-41510606)
chr2 (242-559)||(45153708-45154023)
chr2 (312-602)||(41854778-41855061)
chr2 (8-168)||(4329251-4329411)
chr2 (241-590)||(25217660-25218023)
chr2 (312-602)||(42894369-42894657)
chr2 (242-568)||(17474707-17475033)
chr2 (227-602)||(5507323-5507699)
chr2 (302-602)||(41203060-41203358)
chr2 (312-590)||(36874977-36875253)
chr2 (245-590)||(34517026-34517369)
chr2 (423-599)||(19109892-19110068)
chr2 (418-587)||(16750318-16750485)
chr2 (417-580)||(8388746-8388909)
chr2 (424-590)||(35251032-35251198)
chr2 (306-408)||(4268303-4268406)
chr2 (477-600)||(30763804-30763927)
chr2 (425-602)||(42478846-42479023)
chr2 (469-602)||(38308706-38308840)
chr2 (241-403)||(9847495-9847658)
chr2 (227-382)||(25715270-25715427)
chr2 (424-598)||(45293743-45293916)
chr2 (312-389)||(33366920-33366996)
chr2 (416-586)||(26228160-26228330)
chr2 (465-591)||(37773700-37773827)
chr2 (313-506)||(38066643-38066834)
chr2 (459-521)||(17766784-17766846)
chr2 (314-388)||(38308880-38308954)
chr2 (525-598)||(13704690-13704763)
chr2 (456-510)||(9847386-9847440)
chr2 (459-521)||(34519492-34519554)
chr2 (549-590)||(27670723-27670764)
chr2 (525-590)||(38065463-38065528)
chr2 (459-521)||(9847167-9847229)
[»] chr6 (32 HSPs)
chr6 (241-602)||(23406717-23407077)
chr6 (242-602)||(2813103-2813463)
chr6 (241-602)||(5699479-5699846)
chr6 (256-602)||(17264346-17264690)
chr6 (241-600)||(4508183-4508540)
chr6 (227-598)||(5638786-5639138)
chr6 (242-589)||(14587452-14587797)
chr6 (245-480)||(32035038-32035266)
chr6 (227-590)||(3717173-3717534)
chr6 (283-588)||(1945423-1945725)
chr6 (245-581)||(24604261-24604597)
chr6 (241-408)||(33413417-33413584)
chr6 (242-408)||(7412750-7412916)
chr6 (302-599)||(9905100-9905392)
chr6 (367-590)||(2539498-2539719)
chr6 (455-602)||(21514910-21515057)
chr6 (417-600)||(29519374-29519557)
chr6 (417-590)||(13800918-13801091)
chr6 (417-586)||(7734221-7734390)
chr6 (477-578)||(32044537-32044638)
chr6 (440-600)||(34528558-34528718)
chr6 (419-602)||(29289504-29289687)
chr6 (424-599)||(6704009-6704183)
chr6 (417-601)||(14037845-14038026)
chr6 (427-598)||(236899-237069)
chr6 (463-589)||(16450355-16450481)
chr6 (559-602)||(33413365-33413408)
chr6 (465-590)||(3365808-3365933)
chr6 (485-601)||(10310311-10310427)
chr6 (459-510)||(17501003-17501054)
chr6 (330-388)||(21517572-21517630)
chr6 (543-600)||(7412971-7413028)
[»] scaffold0137 (1 HSPs)
scaffold0137 (242-598)||(9380-9734)
[»] scaffold0027 (1 HSPs)
scaffold0027 (253-602)||(141843-142188)
[»] scaffold0508 (1 HSPs)
scaffold0508 (227-602)||(3273-3648)
[»] scaffold0010 (2 HSPs)
scaffold0010 (457-602)||(140620-140765)
scaffold0010 (253-324)||(140541-140612)
[»] scaffold0182 (2 HSPs)
scaffold0182 (253-402)||(23056-23205)
scaffold0182 (448-521)||(23228-23301)
[»] scaffold0006 (2 HSPs)
scaffold0006 (423-586)||(59865-60028)
scaffold0006 (442-513)||(59480-59551)
[»] scaffold0564 (1 HSPs)
scaffold0564 (422-590)||(4471-4639)


Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 18583796 - 18583423
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||| ||||||||| |||||||||||||||||||     
T  18583796 aaatgcccttgaggttttcggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatgaagttacggacttttccggattttgtaatct 18583697  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||| |||||||||||       ||||||||||    
T  18583696 ggaaacttaaaaaaatagggcgcgttacatgatgttttcggattacataatccggaaaccccctaaacacctttttttaaggtaaaa---tagttcggat 18583600  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  18583599 tatataatctgaactgtatcggcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatccttttgt 18583500  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  18583499 tttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 18583423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 227 - 602
Target Start/End: Original strand, 23442645 - 23443018
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| |||||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| |||||     
T  23442645 aaatgcccttgaggtttccggatttcattatccggaatgatgttttcctttgttataaggtgaaaaatggagttacggatttttccggattttataatct 23442744  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| ||||| | |||||||||||       ||||||||||    
T  23442745 ggaaacttcaaaaaatagggcgcgttacatgatgtttccggattatataattcggaaaccccccaaacatctttttttaaggtaaaa---tagttcggat 23442841  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  23442842 tatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaactcttatccttttgt 23442941  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  23442942 tttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctctgaaacttcccc 23443018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 33611662 - 33611289
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| |||| |||||||||||||| ||||| |||||| || |||| ||||||||||||||||||||||||||||| |||||||||||||      
T  33611662 aaatgcccttgaggtttctggatttcataatccagaatggtgtttttctttgttatagggtgaaaaatggagttacggattttttcggattttgtaattt 33611563  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||||||||||||||       ||||||||||    
T  33611562 ggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatctggaaaccccctaaacacccttttttaaggtaaaa---tagttcggat 33611466  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| |    
T  33611465 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatccttttgt 33611366  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  33611365 tttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 33611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 49786190 - 49786548
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||||||||||||||| |||||  ||||||||| | || |||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||||    
T  49786190 tttccggatttcataatctggaattgtgttttcctttattatagggtgaaaaatggagttatggatttttccggattttgcaatccgaaaactttaaaaa 49786289  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |       |||||||||||||||||||| || |    
T  49786290 ataggacgcgttacatgatgtttccggattacataatccggaaacccccaaacacccttttttaagataaaa---tagttcggattatataatcctaact 49786386  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||    
T  49786387 gtatcagcacaaatcctaaacttatttgtaacatgtatagccattttatggacaatattaatcttcctaactcttatccttttgttttgggtcaatgtta 49786486  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | |||| |||||||||||||   ||||||| |||||||||||||||||||| ||||||||||    
T  49786487 catgtttttagtcaaaaatcaagttttcggcctacttgatcggattgctctgaaacttcccc 49786548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 241 - 602
Target Start/End: Complemental strand, 34162960 - 34162600
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggattttt-ccggattttgtaatccggaaacttcaaaa 339  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  34162960 tttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttgcgggttttttccggattttgtaatccggaaacttcaaaa 34162861  T
Q  340 aatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaa 438  Q
    ||||||||| |||| ||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        |||||| |||||||||||||||    
T  34162860 aatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaac----agttcgaattatataatccgaa 34162765  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattc 537  Q
     ||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    ||||||||||||     
T  34162764 ctgtatcagcacaaattctaaacatgtttgtaacatggatagccattttagggacaatattaatcttcctaactcctatccttccgtttttgggtcattg 34162665  T
Q  538 ttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||| ||||||||||||||||||| |||||||||||||||||| || ||||||  ||||||||||    
T  34162664 ttacatgttcttagtcaaaaatcgaattttcgggctacttgattggtttgctccgaaacttcccc 34162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 245 - 590
Target Start/End: Complemental strand, 41584904 - 41584556
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    |||||||||||||| |||||| ||||||| | |||| |||||||||||||| |||||||| |||||| ||||||||||||||||||| |||||||| |||    
T  41584904 cggatttcataatcaggaatggtgttttcttttgttatagggtgaaaaatgaagttacgggtttttctggattttgtaatccggaaatttcaaaaactag 41584805  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatcc-----gaa 438  Q
    |||  |||||||||||||| | |||||||||||||| |||||||| ||||| ||||||| |||||        |||||||||||||||||||     |||    
T  41584804 ggcatgttacatgatgttttcggattacataatccggaaaccccctaaacatcctttttcaaggtaaatc---agttcggattatataatccaatccgaa 41584708  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattct 538  Q
     ||||||||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |    
T  41584707 ctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgt 41584608  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  41584607 tacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 41584556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 227 - 602
Target Start/End: Original strand, 17000287 - 17000659
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| |||| |||||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |    
T  17000287 aaatgcccttgagttttc-ggatttcataatccagaatggtgttttcctttgttatagggtgaaaaatggagttacgg-tttttccggattttgtaattc 17000384  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||| ||||| |||||||| ||||| ||||||||||  |||||||||||||| |||||||| ||||||| ||||| |||||        |||| | ||    
T  17000385 ggaaacatcaaataatagggcacgttagatgatgtttctggattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agtttgaat 17000481  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-tta 524  Q
    ||||||||| ||  ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||        
T  17000482 tatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgt 17000581  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||    
T  17000582 ttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttcccc 17000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 242 - 535
Target Start/End: Complemental strand, 32817848 - 32817557
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||||||||||| | ||||  |||||||||||  |||| |||| ||||||| ||||||||||||||||||||||||||||    
T  32817848 ttccggattatataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccagattttgtaatccggaaacttcaaaaaa 32817749  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||        |||||||||||||||||||||| |    
T  32817748 tagggcgcattacatgatgtttccagattacataatccgaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaact 32817652  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcat 535  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  32817651 gtatcagcacaaatcctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 253 - 602
Target Start/End: Original strand, 42545901 - 42546248
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||| |||| || | ||||  ||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42545901 ataatccggaatggtgttatcttttgttaaagggtgaaaaatgaa-taacggatttttccggattttgtaatccggaaacttcaaaaaataggacgcgtt 42545999  T
Q  353 acatgatgtttcccgattacataatccgaaaacccccaaa-cacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    ||||||||||||| ||| |||| |||||||||||||| || |||||||||| |||||        |||||||||||||||||||||| ||||||||||||    
T  42546000 acatgatgtttccggataacatgatccgaaaaccccctaagcaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcaca 42546096  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttag 551  Q
    ||| |||||||| ||||||||||| |||| |||||||| || |||||||||| | |||||||| |||||| | |||||||||||| |||  |||||||||    
T  42546097 aattctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaactctcatccttctgttttgggtcattgttatctgttcttag 42546196  T
Q  552 tcaaaaatc-ggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | ||||| | || |||||||||||||||||||||||||||  ||||||||||    
T  42546197 ttaaaaaccgggtttttcgggctacttgatcggattgctccgaaacttcccc 42546248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 253 - 590
Target Start/End: Complemental strand, 15070068 - 15069732
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    |||||||| |||||||||||| | ||||  |||| ||| ||  |||| |||||| ||| |||||||||||||||||||||||||||||||||| || |||    
T  15070068 ataatccgaaatgatgttttcttttgttaaagggagaacaaatgagtaacggatattttcggattttgtaatccggaaacttcaaaaaataggacgtgtt 15069969  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc--aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcac 450  Q
    ||||||||||||| ||||| |||||||| ||||||||  ||||||| ||||| ||| |        ||||| |||||||||||||||| |||||||||||    
T  15069968 acatgatgtttccggattatataatccggaaacccccctaaacaccatttttcaagataaaac---agttcagattatataatccgaactgtatcagcac 15069872  T
Q  451 aaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttctta 550  Q
    ||||  ||||||| ||||||||||| |||| |||||||| ||||||||||||||| |||||| | |||||| | |||||| ||||| |||||||||||||    
T  15069871 aaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaactttcatccttctgttttggatcattgttacttgttctta 15069772  T
Q  551 gtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    || |||||||||||||||| ||||||||||||||||||||    
T  15069771 gttaaaaatcggattttcgagctacttgatcggattgctc 15069732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 315 - 602
Target Start/End: Original strand, 49677478 - 49677763
Alignment:
Q  315 attttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnn 413  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| |||||||| |||| |||||         
T  49677478 attttgtaatctggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccccttttcaaggtaaaac 49677577  T
Q  414 nntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 513  Q
       |||||||||||||||||||||| |||||||||| |||| |||| ||| ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  49677578 ---agttcggattatataatccgaactgtatcagcataaattctaaccatgtttgtaacatagatagtcattttagggacaatattaatcttcctaactc 49677674  T
Q  514 ttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | || ||| | |||||||||||| |||| |||||||||| ||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  49677675 tcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggttttcagcctacttgatcggattgctccgaaacttcccc 49677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 296 - 590
Target Start/End: Complemental strand, 45047033 - 45046741
Alignment:
Q  296 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 394  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||  ||||||||||||| |||||||| |||||    
T  45047033 gagtaacggatttttccggattttgtaatccgaaaacttcaaaaaagagggc-cattacatgatgtttccgaattacataatccggaaaccccctaaaca 45046935  T
Q  395 ccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggac 493  Q
    |||  |||| || ||       ||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||| ||||||    
T  45046934 cccccttttcaatgtaaaa---tagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggac 45046838  T
Q  494 aatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  45046837 aatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctc 45046741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 253 - 600
Target Start/End: Complemental strand, 40650902 - 40650556
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgt 351  Q
    ||||||||||||| ||||||| | ||||  || ||||||||   |||| |||||||||| |||| |||||||||||||||||||||||||||||||| ||    
T  40650902 ataatccggaatggtgttttcttttgttaaagcgtgaaaaaaatgagtaacggattttttcggaatttgtaatccggaaacttcaaaaaatagggcgtgt 40650803  T
Q  352 tacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcac 450  Q
    |||||||||||||  |||||||||||||| |||||||  ||||||| ||||| |||||        |||||||||||||| ||| ||| |||||||||||    
T  40650802 tacatgatgtttctggattacataatccggaaaccccttaaacaccatttttcaaggtaaaac---agttcggattatatgatctgaactgtatcagcac 40650706  T
Q  451 aaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttctta 550  Q
    ||||  ||| ||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| |  ||||||||||| |||| ||||||||    
T  40650705 aaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctcgtttgggtcattgttacctgttctta 40650606  T
Q  551 gtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    || ||||| ||  |||||||||||||||||||||||||||  ||||||||    
T  40650605 gttaaaaaccgagttttcgggctacttgatcggattgctccgaaacttcc 40650556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 242 - 602
Target Start/End: Complemental strand, 40908171 - 40907813
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||| ||||| |||||||| |||| ||||||| | ||||  |||||||||||  |||| ||||||||||  | |||||| ||||||||||||||||||||    
T  40908171 ttccagattttataatccgaaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggattttttagaattttgcaatccggaaacttcaaaaaa 40908072  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaag 439  Q
    | ||||| | |||||||||||| | ||||||||||||||||||||||| |||||||||||||| |||||        ||||||||||||||| || |||     
T  40908071 ttgggcgtgctacatgatgttttcggattacataatccgaaaaccccctaaacaccctttttttaaggtaaaac---agttcggattatata-tctgaac 40907976  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    ||||||||||||||| |||||||| ||||||||||| |||  |||||||| |||||||||||||||||||||||  ||| || |  ||||||||||| ||    
T  40907975 tgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagagacaatattaatcttcctaactcccatctttctgctttgggtcattgtt 40907876  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    || |||| ||||| ||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  40907875 acctgttgttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 40907813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 283 - 590
Target Start/End: Original strand, 7011172 - 7011478
Alignment:
Q  283 agggtgaaaaatggagttacggatttttcc-ggattttgtaatccggaaacttcaaaaaata-gggcgcgttacatgatgtttcccgattacataatccg 380  Q
    ||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||| | ||||||||||||||||||||||  || |  |||||||    
T  7011172 agggtgaaaaatg-agtaacggattttttctggattttgtaatccggaaacttcaaaaaaaaagggcgcgttacatgatgtttccgaatcatgtaatccg 7011270  T
Q  381 aaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtata 479  Q
    ||||||||| ||||| | ||||| |||||       ||||||||||||||||||||||| |||||||||| |||| |||||||| ||| ||||||| |||    
T  7011271 aaaaccccctaaacatcatttttcaaggtaaaa---tagttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggata 7011367  T
Q  480 gccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttga 579  Q
    | ||||||||||||||||||||||||| ||||||| |||||| | |||| ||||||| | || |||| ||||||||||||||| ||||||||||||||||    
T  7011368 gtcattttagggacaatattaatcttcttaactctcatccttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttga 7011467  T
Q  580 tcggattgctc 590  Q
    |||||||||||    
T  7011468 tcggattgctc 7011478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 303 - 602
Target Start/End: Complemental strand, 28866806 - 28866509
Alignment:
Q  303 ggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttt 401  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||| |||||||| ||||| |||||||||||| ||| |||| | ||||||||||||    
T  28866806 ggatttttccggattttgtaatccggaa-ctataaaaaatagggcgcgctacatgatttttccggattacataatctgaacacccgctaaacaccctttt 28866708  T
Q  402 ttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa 501  Q
    | ||||         |||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||| |||||||||||| ||||| | ||||    
T  28866707 taaagggaaaaac--agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaa 28866610  T
Q  502 tcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    ||||| ||||||| |||||| | ||||||| |||| |||| ||||||||||||||||||||  |||||| |||||||||||||||||||  |||||||||    
T  28866609 tcttcataactctcatccttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttccc 28866510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 283 - 557
Target Start/End: Complemental strand, 44573292 - 44573021
Alignment:
Q  283 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 382  Q
    |||||||||||  |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |    
T  44573292 agggtgaaaaaatgagtaacagattttttcggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttttcggattacataatccgga 44573193  T
Q  383 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 481  Q
    || |||  |||| || ||||| |||||       ||||||||||||||||||| ||| ||||| |||||||||  ||||||| ||||||||||| ||||     
T  44573192 aatcccttaaactccttttttcaaggtaaaa---tagttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagt 44573097  T
Q  482 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaa 557  Q
    |||||||||||||||||||||||| |||||||| |||||| | |||||| ||||| ||||||||||||||||||||    
T  44573096 cattttagggacaatattaatctttctaactctcatccttctgttttggatcattgttacttgttcttagtcaaaa 44573021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 253 - 602
Target Start/End: Complemental strand, 45568103 - 45567769
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgt 351  Q
    ||||||||||||||| ||||| | ||||  |||||||||||   |||| |||| |||||||| |||||||||| |||||||||||||||||||||||||     
T  45568103 ataatccggaatgatattttcttttgttaaagggtgaaaaaaatgagtaacgggtttttccgaattttgtaattcggaaacttcaaaaaatagggcgcgc 45568004  T
Q  352 tacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcac 450  Q
    |||||||| |||   |||||||| |||||||||||||| ||||||||||||| |||||                  | | |||||||| |||||||||||    
T  45568003 tacatgatatttttggattacatgatccgaaaaccccctaaacaccctttttaaaggta-----------------aaacaatccgaactgtatcagcac 45567921  T
Q  451 aaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttctta 550  Q
    |||| |||||||| ||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||| ||||||||    
T  45567920 aaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatccatttgttttgggtcattgttacctgttctta 45567821  T
Q  551 gtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    || ||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  45567820 gtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 45567769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 227 - 492
Target Start/End: Original strand, 32542313 - 32542563
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||| | ||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||          |||||||    
T  32542313 aaatgccattgaggtttccggatttcataatccggaatggtgttttcctttgttgtagggtgaaaaatggagttacggatttt----------gtaatcc 32542402  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||| ||||||||||||||| |||||||||||||||| | |||||||||||||  |||||||| |||||||||||   |||||       ||||||||||    
T  32542403 ggaatcttcaaaaaatagggtgcgttacatgatgtttacggattacataatccagaaaccccctaaacacccttt---aaggtaaaa---tagttcggat 32542496  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga 492  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  32542497 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattctaggga 32542563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 307 - 602
Target Start/End: Original strand, 34006246 - 34006541
Alignment:
Q  307 ttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaa 405  Q
    ||||||||||||| ||||||||||| |||||||||||||||| | |||||||| ||||| |||||||||||  ||| |||||  ||||||||||||| ||    
T  34006246 ttttccggattttttaatccggaaaattcaaaaaatagggcgggctacatgatttttccggattacataatttgaacaccccataaacaccctttttcaa 34006345  T
Q  406 ggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatct 504  Q
    ||         ||||| ||||||||||||| || ||||| |||||||||  |||| || ||||||||||| |||| ||||||||||| ||||||||||||    
T  34006346 gggaaaaac--agttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatct 34006443  T
Q  505 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||| |||||| ||||||| ||||||  ||| |||||||||||||||||  | |||||||||||||||||||||||||||  ||||||||||    
T  34006444 tcctaactctcatccttctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttcccc 34006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 419 - 602
Target Start/End: Complemental strand, 52744905 - 52744722
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    ||||||||| |||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||| |||| |||||||||||||||||| |||    
T  52744905 ttcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatc 52744806  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||| | |||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||  ||||||||||    
T  52744805 cttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttcccc 52744722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 302 - 602
Target Start/End: Complemental strand, 26723660 - 26723367
Alignment:
Q  302 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 400  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| | |||||||| |||||      ||||||||||| |||||| |||||||||||    
T  26723660 cggatttttttggattttgtaatccggaaacttcaaaaaatagggcg-gctacatgatttttccg-----cataatccgaacaccccctaaacacccttt 26723567  T
Q  401 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatatt 499  Q
    |||||||          ||||||||||||||||||||| | |||||||||||||   |||||| ||||||||||| |||| ||||||||||| |||||||    
T  26723566 tttaagggaaaaacg--gttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatg-atagtcattttagggaacaatatt 26723470  T
Q  500 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    ||||||||| ||||| ||| || ||||||| |||||| |||  |||||||||| ||||||||| |||| || |||||||||||||||||||  |||||||    
T  26723469 aatcttccttactctgatcattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttc 26723370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 245 - 598
Target Start/End: Complemental strand, 6223972 - 6223634
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaa-aaaata 343  Q
    |||||||||||||||| | |  ||||||||| |||| ||||||||||||  ||||||||||||||| || |||||  |||||| ||||||||| ||||||    
T  6223972 cggatttcataatccgaactcgtgttttcctttgttatagggtgaaaaaatgagttacggattttttcgaatttttcaatccgaaaacttcaaaaaaata 6223873  T
Q  344 gggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgt 442  Q
    | |||| ||||||||| |||   |||||||||||||||| |||||  ||||| ||||||| |||||        ||||||||||||||||||            
T  6223872 gagcgcattacatgatttttttggattacataatccgaacaccccataaacatcctttttcaaggtaaaaac--agttcggattatataatc-------- 6223783  T
Q  443 atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttact 542  Q
      || |||||||  |||| || ||||||||||| |||| ||||||||||||||||      ||||||||| | || ||| | |||| ||||||| ||||     
T  6223782 --caacacaaattttaaatatgtttgtaacatggatagtcattttagggacaata-----attcctaactatcattcttctgttttaggtcattgttaca 6223690  T
Q  543 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  6223689 tgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 6223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 227 - 403
Target Start/End: Complemental strand, 30829707 - 30829541
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||  ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||          |||||||    
T  30829707 aaatgcccttgaagtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatgaagttacggatttt----------gtaatcc 30829618  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 403  Q
    |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  30829617 ggaaacttcaaaaa-tagggcgcgttacatgatgttttcggattacataatccgaaaaccccctaaacaccctttttt 30829541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 227 - 403
Target Start/End: Complemental strand, 24471556 - 24471389
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||| ||| ||| ||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||          |||||||    
T  24471556 aaatgtccttgaggtttccggatttcataatccggaatggtgttttcctttgttatagggtgcaaaatggagttacggatttt----------gtaatcc 24471467  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc--aaacaccctttttt 403  Q
     ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  24471466 agaaacttcaaaaa-tagggcgcgttacatgatgtttccggattacataatccgaaaacccccctaaacaccctttttt 24471389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 242 - 590
Target Start/End: Original strand, 38885161 - 38885481
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||| ||||||| | ||||  |||||||||||  |||| || ||||||||||||||           | |||| ||||||    
T  38885161 ttccggattatataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacagatttttccggatt-----------acacttaaaaaaa 38885249  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
     |||||| |||||||||||||||  |||||||||||||| |||||||  ||||||||||||| |||||        | |||||||||||||||||||| |    
T  38885250 gagggcgtgttacatgatgtttca-gattacataatccggaaaccccttaaacaccctttttcaaggtaaaac---atttcggattatataatccgaact 38885345  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| | |              ||||||| ||||||||||||| ||||||||||| |||||| | |||||||||||| |||    
T  38885346 gtatcagcacaaattctaaacatgtgt--------------cattttaaggacaatattaattttcctaactctcatccttctgttttgggtcattgtta 38885431  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||| |||||| || |||||||||||||||||||||||||||    
T  38885432 cttgttcttagttaaaaattgggttttcgggctacttgatcggattgctc 38885481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 416 - 600
Target Start/End: Original strand, 27794925 - 27795108
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    ||||||| ||||||||||| ||| ||||||||| |||||  ||||||| ||| ||||||  |||| ||||||| ||||||||||||||||||||||| |     
T  27794925 tagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggacaatattaatcttcctaactatc 27795024  T
Q  516 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    || ||| | |||||||||||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||||||  ||||||||    
T  27795025 at-cttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaaacttcc 27795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 241 - 403
Target Start/End: Complemental strand, 43319434 - 43319271
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||| |||||| |||||| ||||   ||||||||| ||||  |||||||||||  ||||||||||||||||||||||||||||||||||||  | |||||    
T  43319434 tttctggattttataatctggaacagtgttttcctttgttaaagggtgaaaaaatgagttacggatttttccggattttgtaatccggaaatctaaaaaa 43319335  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 403  Q
    ||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||| |||||||    
T  43319334 atatggcgcgttacatgattttttcggattacataatccgaaaaccccctaaacactctttttt 43319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 419 - 602
Target Start/End: Complemental strand, 24472889 - 24472706
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    |||||||||||||||||||| | ||| |||||||||  ||||||| ||||||||||| |||| ||||||| ||| |||||||| |||||||||| | ||     
T  24472889 ttcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaactatcatt 24472790  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||| | |||| ||||||| |||  ||||||||||||||||||| ||||  |||| ||||||| |||||||||  ||||||||||    
T  24472789 cttctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccgaaacttcccc 24472706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 418 - 590
Target Start/End: Complemental strand, 3561398 - 3561226
Alignment:
Q  418 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 517  Q
    ||||| ||||||||||||||| |||||||||||||||  | ||||| ||||||||||  ||||  |||||| ||||| |||||||||| |||||||| ||    
T  3561398 gttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaaggacagtattaatctttctaactctcat 3561299  T
Q  518 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | || | |||| ||||||| ||| ||||||||||||||||||| ||| || ||| ||||||||| ||||||||    
T  3561298 cattctgttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatcagattgctc 3561226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 418 - 590
Target Start/End: Original strand, 42928980 - 42929152
Alignment:
Q  418 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 517  Q
    ||||||||||||||||||| | |||||||| ||||||| | | ||| ||| |||||||||| ||||||||| |||| |||||||| ||| ||||||| ||    
T  42928980 gttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaactctcat 42929079  T
Q  518 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     ||| | |||| | ||||| ||| ||||||| ||||||||||| | |||||| ||||||||||| ||||||||    
T  42929080 tcttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctc 42929152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 459 - 601
Target Start/End: Complemental strand, 25563436 - 25563294
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 558  Q
    ||||| ||||||| ||| |||| ||||||| |||||||||||| |||| |||| || |||||||| |||| ||||||| ||| ||||| |||||||||||    
T  25563436 aacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaa 25563337  T
Q  559 tcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    || ||| |||| ||||||||||||||||||||  |||||||||    
T  25563336 tccgatattcgagctacttgatcggattgctccgaaacttccc 25563294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 359
Target Start/End: Original strand, 27794762 - 27794893
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| || |||| |||||||||||||||| | || ||||||||| |||| ||||||||||||  |||||| |||||||| | |||||||||||||    
T  27794762 aaatgcccttgaaattttcggatttcataatccgaactggtgttttcctttgttatagggtgaaaaaatgagttatggattttttcagattttgtaatcc 27794861  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgat 359  Q
    | |||  || ||||||||||||| |||||||||    
T  27794862 gaaaatctc-aaaaatagggcgctttacatgat 27794893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 242 - 359
Target Start/End: Complemental strand, 52745054 - 52744937
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||  ||||||| ||||| | ||||  || ||||||||  |||| ||||||||||||| ||||||||||| | |||||||||||||    
T  52745054 ttccggattatataatctagaatgatattttcttttgttaaagtgtgaaaaaatgagtaacggatttttccgaattttgtaatctgaaaacttcaaaaaa 52744955  T
Q  342 tagggcgcgttacatgat 359  Q
    ||||||||| ||||||||    
T  52744954 tagggcgcgctacatgat 52744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 241 - 403
Target Start/End: Original strand, 38950202 - 38950353
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||| ||||| ||||||| | ||||||| ||||  | | ||||||||| |||||||||||||||| |||||||||||||          ||||    
T  38950202 tttccggattttataattcggaatggtattttcctttgttaaaag-tgaaaaatg-agttacggatttttccagattttgtaatcc----------aaaa 38950289  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaac-ccccaaacaccctttttt 403  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||| ||| |||||| |||||||    
T  38950290 atagggcgcgttacatgattttttcagattacataatccgaaaactccctaaacactctttttt 38950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 890609 - 890704
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 512  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||   | ||||||||||| ||| ||| |||| ||||||||||||||||| |||||    
T  890609 agttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatattaatcttcataact 890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 417 - 528
Target Start/End: Complemental strand, 9446159 - 9446048
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||  |||||||||  ||| |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||||||| || || | |    
T  9446159 agttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttca 9446060  T
Q  517 tccttttatttt 528  Q
    ||||| ||||||    
T  9446059 tccttgtatttt 9446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 521
Target Start/End: Complemental strand, 9445922 - 9445846
Alignment:
Q  445 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    |||||| ||| |||||||| |||||| |||| |||| ||||||| ||| ||| ||||||||||||||||| ||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatcctt 9445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 416 - 527
Target Start/End: Original strand, 26230145 - 26230256
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    |||| |||||||||||| ||||| ||||||| ||||| | |||| | |  |||||||||| ||||||| |||| |||  |||||||||||| || ||||     
T  26230145 tagtgcggattatataacccgaactgtatcaacacaagttctaatcttgcttgtaacatggatagccaatttaaggatcatattaatcttcatagctctc 26230244  T
Q  516 atccttttattt 527  Q
    |||||| |||||    
T  26230245 atccttctattt 26230256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 598
Target Start/End: Original strand, 890748 - 890801
Alignment:
Q  545 ttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||||||||||||||| | |||||||| ||||||||| |||||||| |||||||    
T  890748 ttcttagtcaaaaatctggttttcgggttacttgatcagattgctccaaaactt 890801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 403
Target Start/End: Complemental strand, 800969 - 800877
Alignment:
Q  312 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 403  Q
    |||||||||||||||| |||  |||||||||||||||| |||  |||| ||| | ||||| | |||||||| |||||| ||||||| ||||||    
T  800969 cggattttgtaatccgaaaatctcaaaaaatagggcgctttatttgattttttcggattatagaatccgaacaccccctaaacaccatttttt 800877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 521
Target Start/End: Complemental strand, 43319016 - 43318940
Alignment:
Q  445 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    |||||| ||| || ||||| ||||||||||  |||| ||||||| | ||||||||||||||||||||| | ||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatcctt 43318940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 521
Target Start/End: Complemental strand, 800615 - 800552
Alignment:
Q  458 aaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    |||||| |||||| |||| |||| ||||||  ||||||||||||| ||||||||||| ||||||    
T  800615 aaacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatcctt 800552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 590
Target Start/End: Complemental strand, 45880095 - 45880000
Alignment:
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||||||||| | |||||| | |||| ||||||| ||| || || |||||||||||||   |||| ||| |||||||||  |||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctc 45880000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 227 - 602
Target Start/End: Original strand, 47202401 - 47202767
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||| | |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  47202401 aaatgcccttgaggtttccggatttcataatccggaatggtgttttcttttgttatagggtgaaaaatggagttacggatttttccagattttgtaatcc 47202500  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||       ||||||||||    
T  47202501 gaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggt---aaaatagttcggat 47202597  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  47202598 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatccttttgt 47202697  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||       | ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  47202698 tttgggtca-------tcgttcttagtcaaaaatcgggttttcgggctacttgattggattgctcttaaacttcccc 47202767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 237 - 601
Target Start/End: Complemental strand, 3305001 - 3304638
Alignment:
Q  237 gagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttca 336  Q
    |||||||||||||||||||||  |||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3305001 gagatttccggatttcataatttggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatccagaaacttca 3304902  T
Q  337 aaaaa-tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatc 434  Q
    ||||| ||||| | |||||||||| ||||| ||||||||||||| ||||||||| |||||||||||| ||||||       |||||||||||||||||||    
T  3304901 aaaaaatagggtgtgttacatgatatttccggattacataatccaaaaaccccccaaacacccttttctaaggtaaaa---tagttcggattatataatc 3304805  T
Q  435 cgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtca 534  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  3304804 cgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttagggacaatattaatcttcctaactcttatcattttgttttgggtca 3304705  T
Q  535 ttcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    || |||| |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  3304704 ttgttacctgttcttagtcaaaaatcgggttctcgggctacttgatcggattgctctgaaacttccc 3304638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 230 - 600
Target Start/End: Original strand, 31642951 - 31643318
Alignment:
Q  230 tgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccgga 329  Q
    |||||| ||| |||||||||||||||||| |||||| ||||||| | |||| |||||||||||||||||||||||||||||| |||| |||||||  |||    
T  31642951 tgcccttgaggtttccggatttcataatctggaatggtgttttcgtttgttatagggtgaaaaatggagttacggatttttctggatcttgtaatttgga 31643050  T
Q  330 aacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattat 428  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||       |||||||||||||    
T  31643051 aacttcaaaaaatagggtgtgttacatgatgtttccggattacataatccggaaaccccccaaacacccttttttaaggtaaaa---tagttcggattat 31643147  T
Q  429 ataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 528  Q
    |||||| ||| || ||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  31643148 ataatctgaactggatcagcataaatcctaaacatatttttaacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgtttt 31643247  T
Q  529 gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    |||||||| |||| ||||||||||||||||||||  |||||| |||||||||||||||||||| ||||||||    
T  31643248 gggtcattgttacatgttcttagtcaaaaatcgg-gtttcggactacttgatcggattgctctgaaacttcc 31643318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 286 - 601
Target Start/End: Original strand, 8154865 - 8155178
Alignment:
Q  286 gtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac 385  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8154865 gtgaaaaatgaagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccgaaaac 8154964  T
Q  386 cccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccat 484  Q
    |||| |||||||||||||||||||       |||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||||||||||    
T  8154965 cccctaaacacccttttttaaggtaaaa---tagttcggattatataatctaaactctatcagcacaaatcctaaacatatttgtaacatgtatagccat 8155061  T
Q  485 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 584  Q
    |||||||||||||| |||||||||| ||||||||||||| |||| ||||||| |||| |||||||||||||||||||| ||||||| ||||||||||| |    
T  8155062 tttagggacaatatcaatcttcctagctcttatccttttgtttttggtcattattacctgttcttagtcaaaaatcgggttttcggactacttgatcgaa 8155161  T
Q  585 ttgctctaaaacttccc 601  Q
    ||| ||| |||||||||    
T  8155162 ttgttctgaaacttccc 8155178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 242 - 590
Target Start/End: Complemental strand, 42925878 - 42925531
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42925878 ttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttcctgattttgtaatccggaaacttcaaaaaa 42925779  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||| ||||||||||||| | |||||||||||||| |||||||| ||||||| ||||| |||||        ||||||||||||||||| |||| |    
T  42925778 tagggcgcattacatgatgttttcggattacataatccggaaaccccctaaacaccttttttcaaggtaaaac---agttcggattatataatacgaact 42925682  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattctt 539  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    |||||| ||||| ||    
T  42925681 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttggatcattgtt 42925582  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||    
T  42925581 acttgttcttagtcaaaaattgggttttcgggctacttgatcggattgctc 42925531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 242 - 602
Target Start/End: Original strand, 3936030 - 3936388
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||||||||||| | ||||  || ||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||    
T  3936030 ttccggattatataatccggaatgatgttttcttttgttaaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaa 3936129  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||        ||| || ||||||||||||||| |    
T  3936130 tagggcgcgttacatgatgtttccggattacataatccaaaaaccccctaaacaccctttttcaaggtaaaac---agtccgaattatataatccgaaat 3936226  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||| |||||||||  ||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||    
T  3936227 gtattagcacaaattgtaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctattttgggtcattgtta 3936326  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | | |||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||    
T  3936327 cctattcttagtcaaaaatcggattttcggactgcttgatcggattgctccgaaacttcccc 3936388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 227 - 570
Target Start/End: Complemental strand, 28230718 - 28230379
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| |||| |||||| ||||||| ||||| ||||||| | ||||  ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  28230718 aaatgcccttgagttttc-ggattttataatccagaatggtgttttcttttgttaaagggtaaaaaatg-agtaacggatttttccggattttgtaatcc 28230621  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||    
T  28230620 ggaaacttcaaaaaatagggcgcgttacttgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggat 28230524  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |    
T  28230523 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgt 28230424  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 570  Q
    ||||||||||| || | ||||||||||||||| |||| |||||||    
T  28230423 tttgggtcattgttgcatgttcttagtcaaaattcgggttttcgg 28230379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 36468786 - 36468416
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| || ||||||  |||| ||||| ||||||||||||||| | ||||  ||| |||||||  |||| ||||||||||||||||||||||||      
T  36468786 aaatgcccttga-atttccaaattttataattcggaatgatgttttcttttgttaaagg-tgaaaaaatgagtaacggatttttccggattttgtaatat 36468689  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||| ||||||||||||| |||||        |||| | ||    
T  36468688 ggaaacttcaaaaaatagggcgtgttacatgatgtttca-gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agtttgaat 36468593  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||| ||||||||||||||| ||||||| |||||| | |    
T  36468592 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcataactctcatccttctgt 36468493  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  36468492 tttgggtcattgttacatgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 36468416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 227 - 521
Target Start/End: Complemental strand, 24042439 - 24042148
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| |||| | |||||||||| ||||||| ||||||||| || | ||||||||||||||||||||||| |||||||||||||||||||||    
T  24042439 aaatgcccttgag-tttctgaatttcataattcggaatggtgttttcctttgatatagggtgaaaaatggagttacgggtttttccggattttgtaatcc 24042341  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||        |||||||||    
T  24042340 ggaaacttcaaaaaataaggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcggat 24042244  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||  |||| ||||||||||||||||| ||||||||||||||| ||||||    
T  24042243 tatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaactctcatcctt 24042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 241 - 602
Target Start/End: Complemental strand, 33574277 - 33573922
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgt-----agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttc 335  Q
    ||||||| ||||||||||||| ||| ||||||||| |||| |     || |||||||||| ||||| ||||||||  ||||||||||||||||||||||     
T  33574277 tttccgggtttcataatccgggatggtgttttcctttgttttgttatagagtgaaaaatgaagttatggatttttttggattttgtaatccggaaacttt 33574178  T
Q  336 aaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatcc 435  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||||||||||         |||||||||||       ||||||| |||||||||||     
T  33574177 aaaaaatagggtgcgttacatgatgttttcggattacataatccgaaaacccca--------ttttttaaggtaaaa---tagttcgaattatataatct 33574089  T
Q  436 gaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcat 535  Q
    ||| ||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  33574088 gaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactcttatccttttgttttgagtcat 33573989  T
Q  536 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | |||| |||| ||| |||||||| || ||||||  |||||||||||||||||||| ||||||||||    
T  33573988 tgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttcccc 33573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 36629125 - 36629483
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgt-gttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaa 339  Q
    ||||||||||| |||||  |||||| |||||| || | |||  |||||||||||  |||| ||||||||||||||||||||||||| || ||||| ||||    
T  36629125 tttccggattttataatatggaatggtgtttttcttttgttagagggtgaaaaaatgagtaacggatttttccggattttgtaatctggtaacttaaaaa 36629224  T
Q  340 aatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaa 438  Q
    |||||||||||||||||||||||||| |||||||||||| | |||||| | ||||||| |||||||||||        ||||||||||||||||||||||    
T  36629225 aatagggcgcgttacatgatgtttccggattacataatctggaaaccctctaaacaccattttttaaggtaaaac---agttcggattatataatccgaa 36629321  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattct 538  Q
     ||||||||| |||||  ||||||| ||||| ||||||   | ||||||||||| ||||||||||||||||||||| |||||| | |||||| ||| | |    
T  36629322 ctgtatcagcgcaaattttaaacatgtttgttacatgtc--gtcattttagggagaatattaatcttcctaactctcatccttctgttttggctcactgt 36629419  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||| || ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  36629420 tacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 36629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 21111115 - 21110953
Alignment:
Q  8 gaaattttggcgaaagttgctttggagtgtgaaggggtagataaaaatattaggcctactatgagtcaagtggttgagaagcttcaaagaaatgaaatag 107  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21111115 gaaattttggcgaaagttgctttggagtgtgtagaggtagataaaaatattaggcctactatgagtcaggtggttgagaagcttcaaagaaatgaaatag 21111016  T
Q  108 attcctaggtctcttaatgagtgatgcatgatgttaaattagattccttcgtttgcaaataat 170  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  21111015 attcctaggtctcttaatgagtgatgcatgatgttgaattagattccttcgtgtgcaaataat 21110953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 296 - 599
Target Start/End: Original strand, 36408347 - 36408648
Alignment:
Q  296 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 394  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||||||||||| ||||| |  |||||    
T  36408347 gagtaacggatttttccggattttgtaatccagaaacttcaaaaaataaggcgcgatacatgatgtttccggattacataatccggaaacctcataaaca 36408446  T
Q  395 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 494  Q
    || | ||| |||||        |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||  ||||||||||||    
T  36408447 ccatctttcaaggtaaaac---agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggaca 36408543  T
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 594  Q
    |||||||||||| |||||||  | ||| | |||||||||||| |||| |||||||||||||||||  | ||||||| |||||||||||||||||||  ||    
T  36408544 atattaatcttcttaactctctttcttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaa 36408643  T
Q  595 acttc 599  Q
    |||||    
T  36408644 acttc 36408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 253 - 602
Target Start/End: Complemental strand, 19225825 - 19225477
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggattttt-ccggattttgtaatccggaaacttcaaaaaatagggcgcgt 351  Q
    ||||| || |||||||||||| | ||||  |||||||||||  |||| |||||||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  19225825 ataattcgaaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggattttttccggattttgtaatccaaaaacttcaaaaaatagggtgcgt 19225726  T
Q  352 tacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcac 450  Q
    |||||||||||||| |||||||||||||| ||| |||| ||||||| ||||| ||| |        | |||||||||||||||| |||  ||||||||||    
T  19225725 tacatgatgtttccggattacataatccggaaatcccctaaacaccatttttcaagataaaac---aattcggattatataatctgaacggtatcagcac 19225629  T
Q  451 aaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttctta 550  Q
    |||| |||||||| ||||||||||| |||  ||||||| |||  |||| ||||||||||||||| |||||| | |||||||||||| ||||   ||||||    
T  19225628 aaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcatccttctgttttgggtcattgttacccattctta 19225529  T
Q  551 gtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||| | ||||||| ||| |||||||||||||||  ||||||||||    
T  19225528 gtcaaaaatcaggttttcggactatttgatcggattgctccgaaacttcccc 19225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 283 - 600
Target Start/End: Original strand, 9151777 - 9152074
Alignment:
Q  283 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 382  Q
    |||||||||||  |||| || | ||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||| |    
T  9151777 agggtgaaaaaatgagtaacaggtttttccggattttgtaatccggaaacttcaaaaaatagggcgc------------------attacataatccgga 9151858  T
Q  383 aaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 481  Q
    ||||||| ||||| ||||||| |||||        ||| | |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||     
T  9151859 aaccccctaaacatcctttttcaaggtaaaac---agtccagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagt 9151955  T
Q  482 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 581  Q
    ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||||||| |||| || ||||||||||    
T  9151956 cattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactacttgatc 9152055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 253 - 543
Target Start/End: Complemental strand, 37518521 - 37518233
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    |||||||  |||||||||||| | | ||  |||||||||||   ||| ||||||||||||||||||| |||||| ||||||||||||||||||||| |||    
T  37518521 ataatccaaaatgatgttttcttttattaaagggtgaaaaaataagtaacggatttttccggattttataatccagaaacttcaaaaaatagggcgtgtt 37518422  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    |||||| |||||| |||||||||||||| |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| |||||||||| |    
T  37518421 acatgaagtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcata 37518325  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 543  Q
    ||| |||||||| |||||||||   |||| ||||||||| ||| ||||||||||||||||||| |||||| | |||| ||||||| ||||||    
T  37518324 aattctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaactctcatccttctgttttaggtcattgttactt 37518233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 421 - 602
Target Start/End: Complemental strand, 42865162 - 42864981
Alignment:
Q  421 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 520  Q
    |||||||||||||||||| ||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  42865162 cggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 42865063  T
Q  521 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | | |||||||||||| | || ||||||| |||||||||| | ||||||| |||||||||||||||||||| |||| |||||    
T  42865062 tctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatcccc 42864981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 242 - 586
Target Start/End: Original strand, 33151129 - 33151467
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||||||  ||||||  ||||||||||||| | ||||  |||||||||||   |||  ||||||||||   ||||||||||| ||||||||| |||||    
T  33151129 ttccggattatataatctagaatgatgttttcttttgttaaagggtgaaaaaaatgaggaacggattttta--gattttgtaattcggaaacttaaaaaa 33151226  T
Q  341 a-tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccc-ttttttaaggtnnnnnnntagttcggattatataatccga 437  Q
    | |||||||| ||| ||||||| | | |||||||||||||| ||| |||| |||||| | |||||||||||        ||||||||||||||||| |||    
T  33151227 aatagggcgcattatatgatgtcttcggattacataatccggaaatcccctaaacactcattttttaaggtaaaac---agttcggattatataattcga 33151323  T
Q  438 agtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattc 537  Q
    | ||||||||||||||| |||||||| ||||||||||| ||||     ||||||||||||||||||||||||||||| |||||| ||||||||||||||     
T  33151324 actgtatcagcacaaattctaaacatgtttgtaacatgaatag-----ttagggacaatattaatcttcctaactctcatccttctattttgggtcattg 33151418  T
Q  538 ttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
    |||  ||||||||||||||||| || ||||| | |||||||||||||||    
T  33151419 ttatctgttcttagtcaaaaattgggttttctgactacttgatcggatt 33151467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 314 - 598
Target Start/End: Complemental strand, 31985685 - 31985400
Alignment:
Q  314 gattttgtaatccggaaacttcaaaaaa--tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 410  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||||| ||| | ||||||||||| |||| |||||  ||||||| ||||| ||||       
T  31985685 gattttgtaatccgaaaacctcaaaaaaaatagggcgcgttacatgattttttcggattacataattcgaacaccccttaaacaccatttttcaaggggg 31985586  T
Q  411 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 510  Q
          ||||||||||||||||| |||| ||||||| |||||||  ||||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||    
T  31985585 aaac--agttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaa 31985488  T
Q  511 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||| ||| || | |||||||||||| |||   ||||||||||||||||| | |||| ||||||||||||| ||||| || |||||||    
T  31985487 ctctcatcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaactt 31985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 417 - 590
Target Start/End: Original strand, 1518802 - 1518975
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||  |||  ||||||| ||||||||||||||||| ||||||| |    
T  1518802 agttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaactctca 1518901  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||| |||||||||| ||| |||  |||||||||| |||||| || ||||||| |||||||||||||||||||    
T  1518902 tccttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctc 1518975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 319 - 599
Target Start/End: Complemental strand, 24690494 - 24690215
Alignment:
Q  319 tgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaacacccttttttaaggtnnnnnnnta 417  Q
    ||||||||||||||||||||||||||||| |  ||  |||| ||| | ||||| | |||||||| ||||| |||||||||||||| ||||         |    
T  24690494 tgtaatccggaaacttcaaaaaatagggctcactatttgattttttcagattatacaatccgaacacccctcaaacaccctttttcaagggaaaaac--a 24690397  T
Q  418 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 517  Q
    | | ||||||||||||| ||| |||||||||| ||||  ||| ||| ||||||||||| || | ||||||| ||||||||||||||| ||||||||| ||    
T  24690396 gat-ggattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcat 24690298  T
Q  518 ccttttattttgggtcattcttacttgttcttagtcaaaaatcgga-ttttcgggctacttgatcggattgctctaaaacttc 599  Q
    |||||| |||||||||||| ||||  |||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||    
T  24690297 ccttttgttttgggtcattgttacccgttcttagtcaataatcggatttttcgggctacttgatcggattgctccgaaacttc 24690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 259 - 402
Target Start/End: Original strand, 43737063 - 43737207
Alignment:
Q  259 cggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatga 358  Q
    ||||||| ||||||| | ||||  |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43737063 cggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatga 43737162  T
Q  359 tgtttcccgattacataatccgaaaaccccc-aaacacccttttt 402  Q
    ||||| | |||||||||||||| |||||||| |||||||||||||    
T  43737163 tgttttcggattacataatccggaaaccccctaaacacccttttt 43737207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 442 - 590
Target Start/End: Original strand, 19818500 - 19818648
Alignment:
Q  442 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 541  Q
    ||||||||||||||||||||||  |||||||||| ||||  |||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||    
T  19818500 tatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttac 19818599  T
Q  542 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     ||||||| ||| |||||||| |||| || |||||||||||||||||||    
T  19818600 ctgttcttggtcgaaaatcgggtttttggactacttgatcggattgctc 19818648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 419 - 602
Target Start/End: Complemental strand, 36946353 - 36946171
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    |||||||||||||| ||||| ||||||||||||||| || || || ||||||||||| |||  ||||||| | |||||||||| |||||||||||| |||    
T  36946353 ttcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaag-acaatattaagcttcctaactctcatc 36946255  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||| |||||||||||| ||| ||||| |||||||||| || | |||||||| |||||||||| ||||||   ||||||||||    
T  36946254 cttttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaacttcccc 36946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 477 - 590
Target Start/End: Original strand, 43737237 - 43737350
Alignment:
Q  477 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 576  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||| |||||||||||||    
T  43737237 atagtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctact 43737336  T
Q  577 tgatcggattgctc 590  Q
    ||||||||||||||    
T  43737337 tgatcggattgctc 43737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 469 - 600
Target Start/End: Complemental strand, 7115282 - 7115151
Alignment:
Q  469 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 568  Q
    ||||||| ||| ||| |||| ||||||||||||||||  ||||||| |||||| |||||| ||||||| ||| ||||||||||||||||||||  |||||    
T  7115282 taacatggataaccaatttatggacaatattaatcttgataactctcatccttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttc 7115183  T
Q  569 gggctacttgatcggattgctctaaaacttcc 600  Q
    |||||||||||||| |||||||| ||||||||    
T  7115182 gggctacttgatcgtattgctctgaaacttcc 7115151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 416 - 559
Target Start/End: Original strand, 5278358 - 5278501
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    ||||||||||||||||||| ||| ||||| |||| ||||  | ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  5278358 tagttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatcttcctaactctt 5278457  T
Q  516 atccttttattttgggtcattcttacttgttcttagtcaaaaat 559  Q
    |||||| | |||||||||||| |||   ||||||||||| ||||    
T  5278458 atccttctgttttgggtcattgttagccgttcttagtcacaaat 5278501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 227 - 463
Target Start/End: Original strand, 6467603 - 6467839
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaa--t 324  Q
    ||||||||| ||  ||||||||||| || || ||||||| ||||||||| ||||  | ||||||||||| ||||||||||||||||| ||| |||||  |    
T  6467603 aaatgcccttgaagtttccggattttatgattcggaatggtgttttcctttgttaaatggtgaaaaatg-agttacggatttttccgaattatgtaaaat 6467701  T
Q  325 ccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcgg 423  Q
    || ||||  ||||||||||||| | |||||||||| | | | |||||||||||||||| |||||| ||||||||||||| ||||         |||||||    
T  6467702 ccagaaatctcaaaaaatagggtgtgttacatgatttgttcggattacataatccgaacaccccctaaacaccctttttcaagg--gaaaaacagttcgg 6467799  T
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacat 463  Q
    ||||||||||||||| |||||||||| ||||  |||||||    
T  6467800 attatataatccgaactgtatcagcataaattttaaacat 6467839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 242 - 375
Target Start/End: Complemental strand, 42877282 - 42877149
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||||||||||| | ||||  |||||||||||  |||| |||  |||||||||||||||||||| ||||| |  ||||||    
T  42877282 ttccggattatataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgtgtttttccggattttgtaatcgggaaaataaaaaaaa 42877183  T
Q  342 tagggcgcgttacatgatgtttcccgattacata 375  Q
    ||||||||||||||| |||||||| |||||||||    
T  42877182 tagggcgcgttacataatgtttccggattacata 42877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 423 - 601
Target Start/End: Complemental strand, 6467198 - 6467020
Alignment:
Q  423 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 522  Q
    |||||||||||||||| | ||||| ||||| | |||||||| ||||||| ||| ||||  |||||| || |||||||||| |||||||||||  |||||     
T  6467198 gattatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatattaattttcctaactctcttccttc 6467099  T
Q  523 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    |||||| ||||||| |||  |||||||||| ||||||  | | ||| |||||||||||||||||| ||| ||| |||||    
T  6467098 tattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttccc 6467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 510 - 598
Target Start/End: Complemental strand, 26555128 - 26555040
Alignment:
Q  510 actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    ||||| |||||| |||||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactt 26555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 417 - 550
Target Start/End: Complemental strand, 16983806 - 16983673
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||| ||| |||||||||||||||  |     | ||||||||||| ||| ||| ||||  |||||||||||||||||||||||| |    
T  16983806 agttcggattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaactctca 16983707  T
Q  517 tccttttattttgggtcattcttacttgttctta 550  Q
    ||||| |||||| ||||||| |||  ||||||||    
T  16983706 tccttctatttttggtcattattagctgttctta 16983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 424 - 590
Target Start/End: Complemental strand, 48776268 - 48776100
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 521  Q
    |||||||||||| || | ||| |||||||||  | ||||| ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||| || | |      
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcatgcatag 48776169  T
Q  522 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | ||||| |||||||  || ||||||||||||||||||  |||||||| ||||||| ||| ||||||||    
T  48776168 tcattttaggtcattgctagttgttcttagtcaaaaatttgattttcgagctacttaatcagattgctc 48776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 18658233 - 18658141
Alignment:
Q  12 ttttggcgaaagttgctttggagtgtgaaggggtagataaaaatattaggcctactatgagtcaagtggttgagaagcttcaaagaaatgaaa 104  Q
    ||||||| |||||||||||||| |||| || || ||||| | |||||||||||| |||||| || |||||||||||||||||||| |||||||    
T  18658233 ttttggctaaagttgctttggattgtgtagaggaagatagagatattaggcctaatatgagccaggtggttgagaagcttcaaagcaatgaaa 18658141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 346
Target Start/End: Original strand, 28346076 - 28346173
Alignment:
Q  248 atttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggg 346  Q
    ||||||||||| |||||||||||||||| ||||  || |  ||||||| |||||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  28346076 atttcataatctggaatgatgttttcctttgttaaagagaaaaaaatg-agttacggatgtttccgaattttgtaatccagaaacttcaaaaagtaggg 28346173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 512
Target Start/End: Original strand, 48775705 - 48775798
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 512  Q
    |||| ||||||||||||||||| |||||  ||||||||  |||||||  |||||||||| |||| || |||| |||||||||||||||||||||||    
T  48775705 agttaggattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaact 48775798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 495 - 601
Target Start/End: Complemental strand, 37398877 - 37398771
Alignment:
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 594  Q
    |||||||||||||||||||| ||| || | |||| ||||||| ||| ||||||||||| ||||||  | ||||  |||||||||||| ||||||||  ||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  595 acttccc 601  Q
    |||||||    
T  37398777 acttccc 37398771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 419 - 581
Target Start/End: Complemental strand, 48706061 - 48705899
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    ||||| |||||||||| ||| |||||||||||| || |||| | ||||| ||||| | ||| | | |||| | || |||||||||||||||||||  |||    
T  48706061 ttcggtttatataatctgaactgtatcagcacagattctaagcctatttttaacacggataactagtttaagtaccatattaatcttcctaactcggatc 48705962  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 581  Q
     || | |||| ||||||| ||  ||||||| ||| ||||||   |||||||||||||||||||    
T  48705961 tttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatc 48705899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 427 - 536
Target Start/End: Original strand, 43185887 - 43185996
Alignment:
Q  427 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 526  Q
    ||||||||| || |||||||||||||||  ||||||| ||| ||||||| |||  ||||||  ||||||||||||  ||||||||||| || ||| ||||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcatacttatatt 43185986  T
Q  527 ttgggtcatt 536  Q
    || |||||||    
T  43185987 ttaggtcatt 43185996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 28349322 - 28349227
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttca 336  Q
    |||||||||||||||||| | |||| |||||| || ||||  | |||||||||  |||||||| ||||||| | ||||||||||||| ||||||||    
T  28349322 tttccggatttcataatcggaaatggtgtttttctttgttaaatggtgaaaaaatgagttacgaatttttctgaattttgtaatccgaaaacttca 28349227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 39581840 - 39582019
Alignment:
Q  423 gattatataatccgaagtgtatcagcaca--aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 520  Q
    |||||||||||||||| ||||||||||||  |||  |||   | ||||||||||| ||| ||| ||||  |||  ||||||||||| ||||||| || ||    
T  39581840 gattatataatccgaactgtatcagcacacaaattataagtttgtttgtaacatgaataaccaatttaaagac--tattaatcttcataactctcattct 39581937  T
Q  521 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | | |||| ||||||| ||| || ||||| |||||||||| | |||| |||||||||||||  ||||||  |||| ||||||    
T  39581938 tctgttttaggtcattgttagttattcttcgtcaaaaatccggtttttgggctacttgatcatattgcttaaaaaattcccc 39582019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 26555214 - 26555131
Alignment:
Q  306 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 389  Q
    ||||| |||||||||||||||| | |   ||||||||||||||||||||||||| |||   |||||| ||||||||| ||||||    
T  26555214 ttttttcggattttgtaatccgaatatcacaaaaaatagggcgcgttacatgatttttttggattacctaatccgaacaccccc 26555131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 514
Target Start/End: Complemental strand, 8214354 - 8214257
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 514  Q
    |||||||||||  |||| | || || |||| ||| ||| || ||||| |||| |||||| |||| |||| || |||||||||||||||||||||||||    
T  8214354 agttcggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactct 8214257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 8214523 - 8214462
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 520  Q
    ||||| ||||||||||  || | ||||||| ||||||||||||||||||||||||| |||||    
T  8214523 aacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcct 8214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 602
Target Start/End: Complemental strand, 37518215 - 37518142
Alignment:
Q  529 gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||| |||| |||||||||| |||||| || |||| || ||| |||||||||||||||  ||||||||||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttcccc 37518142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 47203149 - 47203105
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttt 271  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||    
T  47203149 aaatgcccttgaggtttccggatttcataatccggaatcatgttt 47203105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 21130029 - 21129987
Alignment:
Q  54 atattaggcctactatgagtcaagtggttgagaagcttcaaag 96  Q
    |||||||||||||||||||||| || ||||||| |||||||||    
T  21130029 atattaggcctactatgagtcaggttgttgagatgcttcaaag 21129987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 255 - 602
Target Start/End: Complemental strand, 31520116 - 31519771
Alignment:
Q  255 aatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttac 354  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  31520116 aatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggctttttccggattttgtaatccagaaacttcaaaaaatagagcgcgttac 31520017  T
Q  355 atgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaa 453  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  31520016 atgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaa 31519920  T
Q  454 tcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtc 553  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||    
T  31519919 tcctaaatataattgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatccttttgtttttggtcattgttacttgttcttagtc 31519820  T
Q  554 aaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  31519819 aaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 31519771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 227 - 599
Target Start/End: Original strand, 21004297 - 21004661
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21004297 aaatgcccttgaggtttccagatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatcc 21004396  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||| |||||||| |||||||||||| |||||||| ||||||||||||||||||| ||| ||||||| |||||||||||       ||||||||||    
T  21004397 ggaaactttaaaaaataaggcgcgttacat-atgtttccggattacataatccgaaaactccctaaacaccattttttaaggtaaaa---tagttcggat 21004492  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    |||||||||||     |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  21004493 tatataatccg-----tatcagtacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcataactcttatccttttgt 21004587  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    ||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||| ||||||||| |||||||    
T  21004588 tttgggtcattgttacatgttcttagtcaaaaatcgggttttccggctacttgatcagattgctctgaaacttc 21004661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 242 - 590
Target Start/End: Original strand, 3094603 - 3094953
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    ||||| |||| ||||| ||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3094603 ttccgcatttaataattcggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaa 3094702  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggt-nnnnnnntagttcggattatataatccgaag 439  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||         ||||| |||||||||||| |||     
T  3094703 tagggcgcattacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaacaaacagttccgattatataatctgaac 3094802  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    ||||||||||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| ||    
T  3094803 tgtatcagcacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgtt 3094902  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    || |||||||||||||||||||  ||||||| |||||||||||||||||||    
T  3094903 acatgttcttagtcaaaaatcgagttttcggactacttgatcggattgctc 3094953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 242 - 590
Target Start/End: Complemental strand, 8885690 - 8885344
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||||||||||| | ||||  || ||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||    
T  8885690 ttccggattatataatccggaatgatgttttcttttgttaaagagtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaa 8885591  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||| |||||        |||||||||||||||||| ||| |    
T  8885590 tagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccattttcaaggtaaaac---agttcggattatataatctgaact 8885494  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||| ||| |||    
T  8885493 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggttattgtta 8885394  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | |||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  8885393 cctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctc 8885344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 44106144 - 44106503
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||| ||||||  ||||| ||||||| | ||||  |||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||    
T  44106144 tttccggattttataatctagaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccagattttgtaatccggaaacttcaaaaa 44106243  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||| |||     
T  44106244 atagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaac 44106340  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||  | ||||||||||||||||||||||||| |||||| | ||||| |||||| ||    
T  44106341 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattccatggacaatattaatcttcctaactctcatccttctgttttgagtcattgtt 44106440  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    || |||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||    
T  44106441 acctgttcttagtcaaaaatcgggttttcgtgctacttgatctgattgctctgaaacttcccc 44106503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 264 - 602
Target Start/End: Complemental strand, 27928156 - 27927820
Alignment:
Q  264 tgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 363  Q
    |||||||||| | ||||  |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27928156 tgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgttt 27928057  T
Q  364 cccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaaca 462  Q
    || |||||||||||| | |||||||| ||||||| ||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||    
T  27928056 ccggattacataatcaggaaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaaca 27927960  T
Q  463 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 562  Q
    | ||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| |||||| ||    
T  27927959 tgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagttaaaaattgg 27927860  T
Q  563 attttcgggctacttgatcggattgctctaaaacttcccc 602  Q
     ||||||| |||||||||| ||||||||  ||||||||||    
T  27927859 gttttcggactacttgatcagattgctccgaaacttcccc 27927820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 253 - 586
Target Start/End: Complemental strand, 42281120 - 42280786
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||||||||||  | ||||  |||||||||||  |||| |||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  42281120 ataatccggaatgatgtttttttttgttaaagggtgaaaaaatgagtaacggatttttccggatttcgtaatccgaaaacttcaaaaaatagagcgcgtt 42281021  T
Q  353 acat---gatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagc 448  Q
    ||||   ||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||| ||| |||||||||    
T  42281020 acatcatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagc 42280924  T
Q  449 acaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttct 548  Q
    ||||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||||||    
T  42280923 acaaattttaaacatgtttgtaacatgcatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttct 42280824  T
Q  549 tagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
    ||||||||||||||||||| || |||||||||||||||    
T  42280823 tagtcaaaaatcggatttttggactacttgatcggatt 42280786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 256 - 602
Target Start/End: Original strand, 28916719 - 28917055
Alignment:
Q  256 atccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaca 355  Q
    |||||||||||||||||| | ||||  |||||||||||  | || |||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  28916719 atccggaatgatgttttcttttgttaaagggtgaaaaaatgggtaacgggtttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaaa 28916818  T
Q  356 tgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaat 454  Q
    |||||||||  |||||||||| ||| |||||||| ||||||||||| |||||||            | |||||||||||||||| |||||||||||||||    
T  28916819 tgatgtttctggattacataaaccggaaaccccctaaacaccctttcttaaggta-----------cagattatataatccgaactgtatcagcacaaat 28916907  T
Q  455 cctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagt-c 553  Q
     |||||||| ||||| ||||| |||| |||||||||||||||||||||||| |||||||| |||||| | |||||||||||| |||| ||||||| ||      
T  28916908 tctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatccttctgttttgggtcattgttacatgttcttggtaa 28917007  T
Q  554 aaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  28917008 aaaaatcgggttttc-gactacttgatcggattgctccgaaacttcccc 28917055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 227 - 514
Target Start/End: Original strand, 37248466 - 37248750
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||||| ||||| ||||| ||||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  37248466 aaatgcccttgag-tttccggatttcaaaatccagaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttctggattttgtaatcc 37248564  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc-gaaaacccccaaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    | |||||| |||||||||||||||||| ||||||||||| ||||||||||||| |||| |||| ||||||| ||||| |||||        |||| | ||    
T  37248565 gaaaacttaaaaaaatagggcgcgttagatgatgtttccggattacataatccagaaaccccctaaacaccatttttcaaggtaaaac---agtttgaat 37248661  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 514  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  37248662 tatataatccgaattgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactct 37248750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 242 - 600
Target Start/End: Original strand, 9073426 - 9073782
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||| || |||||||||||| | ||||  ||||| |||||  |||| ||||| |||| |||||||  |||||||||||||||||||||    
T  9073426 ttccggattatataattcgaaatgatgttttcttttgttaaagggttaaaaaatgagtaacggactttttcggatttgttaatccggaaacttcaaaaaa 9073525  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    || |   ||||||||||||||||| |||||||||||||  |||||||| ||||||| ||||| || ||       ||||||||||||||||| ||||| |    
T  9073526 taagattcgttacatgatgtttccggattacataatccagaaaccccctaaacaccttttttcaaagtgaaa---tagttcggattatataacccgaact 9073622  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||| ||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| | |||||||||||| |||    
T  9073623 gtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctcatccttatgttttgggtcattgtta 9073722  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    | |||||||||||||||||||| |||| || ||||||||| |||||||||  ||||||||    
T  9073723 cctgttcttagtcaaaaatcgggtttttggactacttgattggattgctccgaaacttcc 9073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 300 - 602
Target Start/End: Original strand, 34853309 - 34853608
Alignment:
Q  300 tacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccct 398  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||| | |||||| | |||||||||    
T  34853309 tacgggtttttccggattttgtaatccgaaaactttaaaaaatagggcgcgttacatgatgtttccggattaca-aatctggaaaccctctaaacaccct 34853407  T
Q  399 tttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatat 498  Q
    |||| |||||        ||| ||||||||||||||| || ||||||||||||||| ||||| || ||||||||||| |||| |||||||||||||||||    
T  34853408 ttttcaaggtaaaac---agtccggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatat 34853504  T
Q  499 taatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||||||||||||||| |||||| | |||||||||||| |||| ||||||||| || ||||||  |||||||  ||||||||||||||||||  ||||||    
T  34853505 taatcttcctaactctcatccttctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttgatcggattgctccgaaactt 34853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 247 - 514
Target Start/End: Original strand, 16310526 - 16310791
Alignment:
Q  247 gatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaataggg 346  Q
    ||||||||||||| ||||| ||||||||| |||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  16310526 gatttcataatccagaatggtgttttcctttgttatggggtgaaaaatggagttacaggtttttccggattttgtaatccggaaacttcaaaaaataggg 16310625  T
Q  347 cgcgttacatgatgtttcccgattacataatcc-gaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatc 445  Q
     |||||| ||||| ||||| ||||||| ||||| ||||  ||| ||||||||||||| |||||        |||||  ||||||||||||||| | ||||    
T  16310626 tgcgttagatgatttttccggattacacaatccagaaactccctaaacaccctttttcaaggtaaaac---agttcaaattatataatccgaactatatc 16310722  T
Q  446 agcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 514  Q
    ||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  16310723 agcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactct 16310791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 333 - 513
Target Start/End: Original strand, 40994805 - 40994983
Alignment:
Q  333 ttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatata 431  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| | |||||        |||||||||||||||    
T  40994805 ttcaaaaaatagggcgcgttacatgatgtttccggattacataatctgaaaaccccctaaacaccctttatcaaggtaaaac---agttcggattatata 40994901  T
Q  432 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 513  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  40994902 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 36165902 - 36165716
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| ||||  ||||||| |||||||||||||||| ||||||| |    
T  36165902 agttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctca 36165803  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatc-ggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||| | |||||||||||| |||| |||||||||| ||||| | || |||| ||||||||||||||||||||||  ||||||||||    
T  36165802 tccttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttcccc 36165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 11698380 - 11698195
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||||||||||||||| |||| |||||||||| |||| |||| ||| ||| ||||||| |||| ||||||||||| ||||||||||||||||||||| |    
T  11698380 agttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactctca 11698281  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||   |||| ||||||| |||  |||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  11698280 tccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttcccc 11698195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 417 - 590
Target Start/End: Complemental strand, 14164121 - 14163948
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||| |    
T  14164121 agttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcctaactctca 14164022  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||| | |||| ||||||| |||| ||||||||||||||||  |  |||||||| ||||||||||| ||||||    
T  14164021 tccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctc 14163948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 17119943 - 17119758
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| || ||||||||||| || | ||||||| ||||||||||||||||||||||||| |    
T  17119943 agttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctca 17119844  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||| | |||||| ||||| |||| |||||||||||||||| ||| ||||||| ||||||||| ||||| |||  ||||||||||    
T  17119843 tccttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttcccc 17119758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 417 - 601
Target Start/End: Original strand, 40392631 - 40392815
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||| | | ||||||||||||||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  40392631 agttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctta 40392730  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    || || |  ||||||||||| ||| |||||||||||||||||||   |||||  |||||||||||||||| |||  |||||||||    
T  40392731 tctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttctccgaaacttccc 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 440 - 601
Target Start/End: Original strand, 40328015 - 40328176
Alignment:
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    |||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| ||| || | |||||||| ||| ||    
T  40328015 tgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgtt 40328114  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    || |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  40328115 acctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccc 40328176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 442 - 600
Target Start/End: Original strand, 36980689 - 36980847
Alignment:
Q  442 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 541  Q
    |||||||||||||  | ||||| ||||||||||| |||  ||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||| |||     
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttag 36980788  T
Q  542 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
     | |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  36980789 ctattcttagtcaaaaatccgattttcgggctacttgatcggattgctccgaaacttcc 36980847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 227 - 403
Target Start/End: Original strand, 41530576 - 41530754
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||  |||| |||||| ||||||||||||||||||||||| ||||  |||||| ||||  |||||||||||||||||| ||||||||||||    
T  41530576 aaatgcccttgaagtttctggattttataatccggaatgatgttttcctttgttaaagggtggaaaaatgagttacggatttttccgaattttgtaatcc 41530675  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatga-tgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 403  Q
    |||||  ||||||||||||||||||||||||| | ||| | |||||||||||| ||| |||||| ||| ||||||||||    
T  41530676 ggaaatctcaaaaaatagggcgcgttacatgatttttttcagattacataatctgaacaccccctaaaaaccctttttt 41530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 425 - 589
Target Start/End: Original strand, 1076659 - 1076822
Alignment:
Q  425 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 524  Q
    |||||||||||||| ||||| |||||||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| ||| ||||     
T  1076659 ttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcatagctctcatcattttg 1076757  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 589  Q
    |||||  ||||| ||| |||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  1076758 ttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgct 1076822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 242 - 403
Target Start/End: Complemental strand, 36404391 - 36404231
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||| |||||||||||||  |||| ||| ||||  |||||||||||  |||||||||||| ||||||||||||||||||| |||  ||||||||    
T  36404391 ttccggattttataatccggaatggagtttccctttgttaaagggtgaaaaaatgagttacggattattccggattttgtaatccgaaaatctcaaaaaa 36404292  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacaccctttttt 403  Q
    ||||||| |||||||||| ||| | ||||| ||||||||||||| || ||||||||||||||    
T  36404291 tagggcgtgttacatgat-ttttcggattatataatccgaaaactcctaaacaccctttttt 36404231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 419 - 590
Target Start/End: Complemental strand, 4259697 - 4259528
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    |||||||||||||||| ||| ||||||||||||||| |||| ||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | |||    
T  4259697 ttcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaactatcatc 4259598  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |  || |||| | ||||| ||| |||||||||||||||| || | ||||||||||||| |||||| ||||||    
T  4259597 c--ttcttttcgatcattgttagttgttcttagtcaaaactctggttttcgggctactagatcggcttgctc 4259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 417 - 598
Target Start/End: Original strand, 36317887 - 36318072
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacat----atttgtaacatgtatagccattttagggacaatattaatcttcctaact 512  Q
    |||||||||||||||||| ||| ||||| |||||||||  | |||||    |||||||||||| |||  ||||||| |||||||||||||||| ||||||    
T  36317887 agttcggattatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcattttaaggacaatattaatctttctaact 36317986  T
Q  513 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||||| ||  ||||||||||||| |||  |||||||||||| ||||  |||||||||||||||||||||||| | || |||||||    
T  36317987 cttatctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatagttccaaaactt 36318072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 227 - 403
Target Start/End: Complemental strand, 7971249 - 7971072
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||| ||||||||||||  |||||  ||||||||  ||| |||||||||||| |||||||||||||||||||||||||||||||     
T  7971249 aaatgcccttgaggtttccagatttcataatctagaatggcgttttccttcgttatagggtgaaaaacggagttacggatttttccggattttgtaatct 7971150  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatg-tttcccgattacataatccgaaaacccc-caaacaccctttttt 403  Q
    |||||||||| |||||||| |||| ||| ||||| ||||  ||||||||||||| || |||||  ||||||||||||||    
T  7971149 ggaaacttca-aaaataggacgcgctacgtgatgttttctggattacataatccaaacaccccataaacaccctttttt 7971072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 424 - 586
Target Start/End: Original strand, 28423523 - 28423684
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||| ||| || ||||  |||||| |||||||| ||||||||||| ||   |||||||  |||||||||||||||||||||||| |||||| |    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttct 28423622  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
    |||||| ||||||  || ||||||||||||||||||  | |||||||||||||||||||||||    
T  28423623 attttgcgtcatt-gtagttgttcttagtcaaaaattagtttttcgggctacttgatcggatt 28423684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 424 - 602
Target Start/End: Original strand, 6395186 - 6395364
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    |||||||||||  || ||||||||||| ||| |  ||| | |||||| |||| |||  ||||||| |||||||||||| |||||||||||| || ||| |    
T  6395186 attatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatggacaatattaaacttcctaactctcattcttct 6395285  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
     |||| ||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  6395286 gttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatcggattgttctgaaacatcccc 6395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 35676715 - 35676628
Alignment:
Q  302 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 389  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||| |||||||||||||||| ||||||    
T  35676715 cggatttttccggattttgtaatccggaaactacaaaaaatagggcgcgctatatgatttttccggattacataatccgaacaccccc 35676628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 422 - 590
Target Start/End: Complemental strand, 8621697 - 8621528
Alignment:
Q  422 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||||||||| ||||| |||||||||||||||  | ||  | || |||||||| |||  ||||||| ||| |||||||||||| |||||||||||   |    
T  8621697 ggattatataacccgaactgtatcagcacaaatt-tgaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactcttatggat 8621599  T
Q  522 --ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
      | ||||| ||||||| ||| |||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  8621598 aatcattttaggtcattgttagttgttcttagtcaaaaatccaatttttgagctacttgatcggattgctc 8621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 314 - 380
Target Start/End: Complemental strand, 11698451 - 11698385
Alignment:
Q  314 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccg 380  Q
    |||||||||||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||    
T  11698451 gattttgtaatccggaaacttcaaaaaataagacgtgttacatgatgtttccggattacataatccg 11698385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 465 - 590
Target Start/End: Original strand, 34645520 - 34645645
Alignment:
Q  465 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 564  Q
    ||||||||||  |||| ||||||| ||| ||| ||||| || |||||||| |||||| | |||||| ||||| |||| |||||||||||||| ||| | |    
T  34645520 tttgtaacatagatagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggt 34645619  T
Q  565 tttcgggctacttgatcggattgctc 590  Q
    |||||||||||||||||  |||||||    
T  34645620 tttcgggctacttgatcacattgctc 34645645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 574
Target Start/End: Original strand, 39093602 - 39093760
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    ||||||||||||||||||| ||| ||||||| || ||||  ||| ||| ||||||||||  ||| ||| ||||  ||| ||||||||||| | || |||     
T  39093602 tagttcggattatataatctgaaatgtatcaacataaattataagcatgtttgtaacatacataaccagtttaatgaccatattaatctttcaaagtctc 39093701  T
Q  516 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggcta 574  Q
    ||| || | |||| ||||||| ||| ||||||||||| ||||||  |||||||||||||    
T  39093702 atctttatgttttaggtcattgttaattgttcttagtaaaaaatatgattttcgggcta 39093760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 422 - 514
Target Start/End: Original strand, 7982478 - 7982570
Alignment:
Q  422 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 514  Q
    ||||||||||||| ||| |||||| ||||||||  | ||||| ||||||||||  |||| ||||||| |||||||||||||||||| ||||||    
T  7982478 ggattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactct 7982570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 31234554 - 31234486
Alignment:
Q  445 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 513  Q
    |||||| ||| || ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  31234554 cagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactc 31234486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 521
Target Start/End: Original strand, 33472166 - 33472270
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||| |||| ||||||| || || |  ||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |    
T  33472166 agttcgaattacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctca 33472265  T
Q  517 tcctt 521  Q
    |||||    
T  33472266 tcctt 33472270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 521
Target Start/End: Original strand, 33472373 - 33472477
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||| ||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |    
T  33472373 agttcagattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatca 33472472  T
Q  517 tcctt 521  Q
    |||||    
T  33472473 tcctt 33472477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 445 - 528
Target Start/End: Complemental strand, 10833551 - 10833468
Alignment:
Q  445 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 528  Q
    |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |||||||| ||||    
T  10833551 cagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatccttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 528
Target Start/End: Original strand, 9845323 - 9845392
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 528  Q
    ||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||  ||||| ||||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtccttatatttt 9845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 426 - 589
Target Start/End: Original strand, 7981618 - 7981781
Alignment:
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    |||| |||| ||| |||| || |||||||  | ||||| ||||||||||| |||   |||||| ||||||| ||||  |||||||| || |||||| | |    
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgt 7981717  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 589  Q
    ||||||| ||| ||| ||||| ||| | ||||||   |||||| ||||||||||||||||||||    
T  7981718 tttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcggattgct 7981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 521
Target Start/End: Complemental strand, 10840817 - 10840717
Alignment:
Q  421 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 520  Q
    ||||||||||| | |||| ||||| ||||||||| || |   | ||||||||||| ||| ||| | || ||||||||||||||||||||||||| |||||    
T  10840817 cggattatatatttcgaattgtattagcacaaattctgagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcatcct 10840718  T
Q  521 t 521  Q
    |    
T  10840717 t 10840717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 502
Target Start/End: Original strand, 9845488 - 9845573
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaat 502  Q
    ||||||||||| ||||||| || ||  ||||||| ||| |||||||| ||||||||||| |||  ||||||| || ||||||||||    
T  9845488 agttcggattacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 465 - 509
Target Start/End: Original strand, 24627717 - 24627761
Alignment:
Q  465 tttgtaacatgtatagccattttagggacaatattaatcttccta 509  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  24627717 tttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 31519383 - 31519427
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttt 271  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||    
T  31519383 aaatgcccttgaggtttccggatttcataatccggaatcatgttt 31519427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 40994735 - 40994794
Alignment:
Q  236 ggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg 295  Q
    |||| ||||||||||  ||||||||||||||||||||| | ||||  |||||||||||||    
T  40994735 ggagctttccggattatataatccggaatgatgttttcttttgttaaagggtgaaaaatg 40994794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 41530812 - 41530862
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 509  Q
    ||||| ||||||||||| |||| ||||| | ||||||||||||||||||||    
T  41530812 aacatgtttgtaacatggatagtcatttcaaggacaatattaatcttccta 41530862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 2358876 - 2358501
Alignment:
Q  227 aaatgccctggagatttcc-ggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatc 325  Q
    ||||||||| ||| ||||| |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| | |||||||||||||    
T  2358876 aaatgcccttgaggtttcccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggattttcctggattttgtaatc 2358777  T
Q  326 cggaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccgaaaaccc-ccaaacacccttttttaaggtnnnnnnntagttcgg 423  Q
    |||||||||||||||| ||||||| |||||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||       ||||||||    
T  2358776 cggaaacttcaaaaaaatagggcgtgttacatgatgtttccggcttacataatccggaaaccctccaaacacccttttttaaggtaaaa---tagttcgg 2358680  T
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2358679 attatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 2358580  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
     |||||||||||| || | | |||||||||||||||||| |||| |||||||||||||| |||||||| ||||||||||    
T  2358579 gttttgggtcattgttgcatattcttagtcaaaaatcgggtttttgggctacttgatcgaattgctctgaaacttcccc 2358501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 245 - 598
Target Start/End: Original strand, 47301944 - 47302294
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    ||||||||||||| ||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||     
T  47301944 cggatttcataattcggaatggtgttttcctttgttatagggtgaaaaatggagttatggatttttccggattttgtaatccggaaacttaaaaaaataa 47302043  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgt 442  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||       ||||||||||||||||||||||| |||    
T  47302044 ggcgcgttacatgatgtttccggattacataatccgaaaacctcctaaacaccctttttttaaggtaaaa---tagttcggattatataatccgaactgt 47302140  T
Q  443 atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttact 542  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |||||||||||| ||||     
T  47302141 atcagcacaaatcctaaacatatttgtaacatgtatagccatttta-ggacaatattaatatt-ctaactcttatccttttgttttgggtcattgttaca 47302238  T
Q  543 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||    
T  47302239 tgttcttagtcaaaaatcgagttttcgggctacttgatcggattgttctgaaactt 47302294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 50716173 - 50716533
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||| |||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  50716173 tttccgaatttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaa 50716272  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        | |||||||||||||||| |||     
T  50716273 atagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---aattcggattatataatctgaac 50716369  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattct 538  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||    |||||||||||| |    
T  50716370 tgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgt 50716469  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  50716470 tacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 50716533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 241 - 602
Target Start/End: Complemental strand, 50796674 - 50796314
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||| |||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  50796674 tttccgaatttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggttttttcggattttgtaatccgaaaacttcaaaaa 50796575  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        | |||||||||||||||| |||     
T  50796574 atagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---aattcggattatataatctgaac 50796478  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattct 538  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||    |||||||||||| |    
T  50796477 tgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatcattccgtttttgggtcattgt 50796378  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  50796377 tacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 50796314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 242 - 590
Target Start/End: Complemental strand, 3903043 - 3902697
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||| | |||||||||||||||||||||| |||||||||||||    
T  3903043 ttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaagtggagttactggtttttccggattttgtaatccgaaaacttcaaaaaa 3902944  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    ||| ||||||||||||||||||   |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||||||| |    
T  3902943 tagagcgcgttacatgatgtttttggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaact 3902847  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| ||   ||||||| ||||||||||||||||| ||||||| |||||| |  ||||||||||| |||    
T  3902846 gtatcagcacaaattctaaacatgtttgtaacatggatgatcattttatggacaatattaatcttcataactctcatccttctgctttgggtcattgtta 3902747  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | |||||||||||||||||||| ||||| |  ||||||||||||||||||    
T  3902746 catgttcttagtcaaaaatcgggttttcagattacttgatcggattgctc 3902697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 227 - 602
Target Start/End: Original strand, 52777148 - 52777511
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||| |||||||||||||| |||||| ||||||||| |||| |||| |||||||||||||||||||||||          |||||||    
T  52777148 aaatgcccttgaggttttcggatttcataatctggaatggtgttttcctttgttataggatgaaaaatggagttacggatttt----------gtaatcc 52777237  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcgga 424  Q
    |||||||||||||| ||| || | ||||||||||||||| |||||||||||  | |||||||| |||||||||||||| |||||        ||||||||    
T  52777238 ggaaacttcaaaaa-tagagcactttacatgatgtttccggattacataataaggaaaccccctaaacacccttttttcaaggtaaaac---agttcgga 52777333  T
Q  425 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 524  Q
    |||||||||  ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  52777334 ttatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaactcttatccttttg 52777433  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  52777434 ttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 52777511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 43473201 - 43472848
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||| ||| ||| |||||| |||||||||||||||||| ||||||||| |||| | |||||||||||||||||||||||||||                    
T  43473201 aaatgtccttgaggtttccgaatttcataatccggaatggtgttttcctttgtttt-gggtgaaaaatggagttacggattttt---------------- 43473119  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
       |||||||||||||| || || ||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||       ||||||| ||    
T  43473118 ---aacttcaaaaaatatggtgcattacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaa---tagttcgaat 43473025  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  43473024 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatccttttgt 43472925  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||| |||  |||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  43472924 tttgggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggattactctgaaacttcccc 43472848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 245 - 602
Target Start/End: Original strand, 28872928 - 28873286
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    |||||||||||||| ||||||||||||| || |||| |||||||||||||| |||||||  |||||| ||||||| ||||||| ||| ||||||||||||    
T  28872928 cggatttcataatctggaatgatgtttttctttgttatagggtgaaaaatgaagttacgagtttttctggattttataatccgaaaatttcaaaaaatag 28873027  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccc--ttttttaaggtnnnnnnntagttcggattatataatccgaagtg 441  Q
    | |||||||||| |||||||| ||||||||||||| | ||||||| ||||||||  |||||||||||        |||||||||||||||||| ||| ||    
T  28873028 gacgcgttacattatgtttccggattacataatccaacaaccccctaaacacccttttttttaaggtaaaac---agttcggattatataatctgaactg 28873124  T
Q  442 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattctta 540  Q
    ||||||||||||| |||||||| ||||||||||  |||| ||||||||||||||||||||||||| ||||||| || |||    |||||||||| | |||    
T  28873125 tatcagcacaaattctaaacatgtttgtaacatagatagtcattttagggacaatattaatcttcttaactctcattcttccgcttttgggtcactgtta 28873224  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  28873225 cttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 28873286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 242 - 601
Target Start/End: Original strand, 35141999 - 35142353
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||| |||| || | ||||  |||||||||||   ||| |||||||||||||| |||||||||||||||||||||||||     
T  35141999 ttccggattatataatccggaatggtgttatcttttgttaaagggtgaaaaa---agtaacggatttttccgggttttgtaatccggaaacttcaaaaat 35142095  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||||        |||||||||||||||||  ||| |    
T  35142096 tagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccattttttaaggtaaaac---agttcggattatataatatgaatt 35142192  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||| |  ||||||||||| |||    
T  35142193 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttctgctttgggtcattgtta 35142292  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
      ||||||||||||||||  || |||||||||||||||||||||||||||  |||||||||    
T  35142293 tctgttcttagtcaaaaactgggttttcgggctacttgatcggattgctccgaaacttccc 35142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 253 - 602
Target Start/End: Complemental strand, 47740158 - 47739812
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||||||||||| | ||||  |||||||||||  |||  || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47740158 ataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagcaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgtt 47740059  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||       | |||  |||||||||||| ||| ||||||||||||    
T  47740058 acatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggt---aaaattgttttgattatataatctgaactgtatcagcaca 47739962  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttag 551  Q
    ||| |||||||| ||||||||||  |||| ||||| ||||||||||||||||||| ||||||| |||||| | |||| ||||||| |||| || | ||||    
T  47739961 aattctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcatccttctgtttt-ggtcattattacctggttttag 47739863  T
Q  552 tcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | |||||| || ||||||||||||||||||||||||||| |||||||||||    
T  47739862 ttaaaaattgggttttcgggctacttgatcggattgctccaaaacttcccc 47739812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 245 - 590
Target Start/End: Complemental strand, 501375 - 501032
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    ||||||||||| ||| ||||| ||||||||| |||| ||||| |||||||||||||| |  |||||||||||||||||||||  ||||||||||||||||    
T  501375 cggatttcatattcctgaatggtgttttcctttgttatagggcgaaaaatggagttatgagtttttccggattttgtaatccaaaaacttcaaaaaatag 501276  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccg-aaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgt 442  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||| ||||||| ||||| |||||        |||||| ||||||||||||||| |||    
T  501275 ggcgcgttacatgatgtttccggattgcataatccggaaaaccccctaaacaccttttttcaaggtaaaac---agttcg-attatataatccgaactgt 501180  T
Q  443 atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttact 542  Q
    || ||||||||| |||||||| ||||||| ||| |||| ||||||| |||||||||||||||||||| |||| |||||| | |||||||||||| ||||     
T  501179 ataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcatccttctgttttgggtcattgttaca 501080  T
Q  543 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||| ||| |||||||||   |||||||||||||||||||||||||||    
T  501079 tgtttttattcaaaaatcatgttttcgggctacttgatcggattgctc 501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 227 - 506
Target Start/End: Original strand, 3937295 - 3937563
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||| ||||||| ||||| ||||||||| |||| |||| |||||||||||||||||  |||||||| ||||||||||||    
T  3937295 aaatgcccttgaggtttccggattttataatccagaatggtgttttcctttgttataggatgaaaaatggagttacgagtttttccgaattttgtaatcc 3937394  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggatt 426  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |||        |||||||||||||||||||       |||||||||||    
T  3937395 ggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataattcga--------aaacacccttttttaaggt---aaaatagttcggatt 3937483  T
Q  427 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 506  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  3937484 atataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 157; E-Value: 5e-83
Query Start/End: Original strand, 242 - 602
Target Start/End: Complemental strand, 38977985 - 38977627
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  |||||| |||||| ||||||  | ||||  |||||||||||   ||| |||||||||||  ||||||||||||||||||||||||||||    
T  38977985 ttccggattatataatctggaatggtgttttattttgttaaagggtgaaaaaataagtaacggatttttctagattttgtaatccggaaacttcaaaaaa 38977886  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||| |||||   ||||||||||||||||||||||| ||||||| ||||| |||||        |||||  ||||||||||||||| |    
T  38977885 tagggcgcgttacatggtgttttgggattacataatccgaaaaccccctaaacaccttttttcaaggtaaaac---agttcaaattatataatccgaact 38977789  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    ||||||||||||||  ||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||    
T  38977788 gtatcagcacaaattataaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgtta 38977689  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | ||| |||||| ||||| ||  |||||| |||||||||||||||||||| |||||||||||    
T  38977688 cctgtccttagttaaaaaccgagttttcgagctacttgatcggattgctccaaaacttcccc 38977627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 241 - 590
Target Start/End: Original strand, 51258324 - 51258672
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||| |||||||||||||||||||  ||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||||||    
T  51258324 tttctggatttcataatccggaattgtgttttcctttgttaaagggtgaaaaatg-agttacggatttttccggattttgtaatccataaatttcaaaaa 51258422  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    |||||||||||||||| || ||| | |||||||||||||||| |||||| ||||||| ||||| ||||         | || | |||||||||||||||     
T  51258423 atagggcgcgttacataattttttcggattacataatccgaacaccccctaaacaccatttttcaagggaaaaac--aatttgaattatataatccgaac 51258520  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttttattttgggtcattct 538  Q
    |||||||||||||||  ||||||| ||| ||||||| |||| ||||||||||| |||||||||||||| ||||||| |||||||| ||||| |||||| |    
T  51258521 tgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatattaatcttcataactctcatccttttgttttgagtcattgt 51258620  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||| |||||||||||||||||||  ||||||| | |||||||||||||||||    
T  51258621 tacatgttcttagtcaaaaatcgagttttcggacaacttgatcggattgctc 51258672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 308 - 602
Target Start/End: Complemental strand, 34821514 - 34821222
Alignment:
Q  308 tttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaag 406  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |||||||| ||||||| ||||| |||    
T  34821514 tttccgaattttgtaatccggaaacttcaaaaaatagagcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttttcaag 34821415  T
Q  407 gtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 506  Q
    ||       ||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  |||| ||||||| |||||||||||||||||    
T  34821414 gtaaaa---tagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttc 34821318  T
Q  507 ctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||| | | |||||| | |||||||||||| |||| |||||||||| ||||| ||| ||||| |||||||||||||||| ||||| ||||||||||    
T  34821317 ctaaatttcatccttctgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttcccc 34821222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 240 - 601
Target Start/End: Complemental strand, 3352306 - 3351946
Alignment:
Q  240 atttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaa 338  Q
    |||| ||||||| |||||||  |||||||||||  | ||||  |||||||||||   |||| ||| ||||||||  ||||||||||| |||||||| |||    
T  3352306 attttcggattttataatccaaaatgatgtttttttttgttaaagggtgaaaaaaatgagtaacgaatttttccaaattttgtaatcaggaaacttaaaa 3352207  T
Q  339 aaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccga 437  Q
    |||||||| |||||||||||||||||| ||||||||||| || |||||||| ||||||||||| | |||||        |||||| ||||||||||| ||    
T  3352206 aaatagggtgcgttacatgatgtttccggattacataattcggaaaccccctaaacaccctttatcaaggtaaaac---agttcgaattatataatctga 3352110  T
Q  438 agtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattc 537  Q
    | ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| || ||| | ||||||||||||     
T  3352109 actgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcattcttctgttttgggtcattg 3352010  T
Q  538 ttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    ||||  ||||||||| |||||| || ||||| |||||||||||||||||||||  |||||||||    
T  3352009 ttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaaacttccc 3351946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 242 - 570
Target Start/End: Complemental strand, 51540853 - 51540525
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg--gagttacggatttttccggattttgtaatccggaaacttcaaaa 339  Q
    |||| ||||| |||||||| |||| ||||||| | ||||  |||||||||||    |||| ||||||||||| |||||||| ||||||||||||||||||    
T  51540853 ttccagattttataatccgaaatggtgttttcttttgttaaagggtgaaaaaaaatgagtaacggatttttctggattttggaatccggaaacttcaaaa 51540754  T
Q  340 aatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaa 438  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||||  ||||||| ||||| |||||        |||||||||||||||||| |||    
T  51540753 aatagggcgcgttacatgatgtttccgaattacataatccggaaaccccttaaacaccgtttttcaaggtaaaac---agttcggattatataatctgaa 51540657  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattct 538  Q
      |||||||||||||| |||||||| |||||||| || |||| ||||||||||||||||||||||||||||||||| |||||| |  ||||||||||| |    
T  51540656 tagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgt 51540557  T
Q  539 tacttgttcttagtcaaaaatcggattttcgg 570  Q
    |||  ||||||||||||||||||| |||||||    
T  51540556 tacacgttcttagtcaaaaatcgggttttcgg 51540525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 241 - 602
Target Start/End: Complemental strand, 49096464 - 49096105
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||| ||||||||||| ||||||||||||| || | ||  ||||||||||||  |||||||||||||||||||||||||||||||||||  |||||||    
T  49096464 tttccgaatttcataatctggaatgatgtttttctttattaaagggtgaaaaata-agttacggatttttccggattttgtaatccggaaatctcaaaaa 49096366  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    ||| |||  |||||||||| ||| |  |||||||||||| || |||||| ||||| ||||||| ||||         |||| | ||||||||||| |||     
T  49096365 atatggcatgttacatgattttttcgaattacataatccaaacaccccctaaacagcctttttcaaggaaaaac---agtttgaattatataatctgaac 49096269  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttttattttgggtcattct 538  Q
    |||||||||||||||  ||||||| ||||||||||  |||| ||||||||||| |||||| ||||||||||||||| |||||| | ||||| |||||| |    
T  49096268 tgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcctaactctcatccttctgttttgagtcattgt 49096169  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||| ||||||| |||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  49096168 tacctgttcttcgtcaaaaatcgagttttcgggctacttgatcggattgctccaaaacttcccc 49096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 254 - 590
Target Start/End: Complemental strand, 46623010 - 46622686
Alignment:
Q  254 taatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaat-ccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||| |||||||||||||| | ||||  | | |||||||  |||| ||||||||||||||||||| |||  ||||||||||||||||||||| | ||||    
T  46623010 taatctggaatgatgttttcttttgttaaatgatgaaaaaatgagtaacggatttttccggattttataaaaccggaaacttcaaaaaataggacacgtt 46622911  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    ||||||||||||| |||||||||||| | |||||||| ||||||| ||||| || ||        |||||||||||||||||||||| ||||||||||||    
T  46622910 acatgatgtttccggattacataatctggaaaccccctaaacaccatttttcaaagtaaaac---agttcggattatataatccgaactgtatcagcaca 46622814  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttag 551  Q
    ||| ||||||||           | |||| ||||||||||||||||||||||||||| ||||| || ||| | |||||||||||| ||||||||||||||    
T  46622813 aattctaaacat-----------ggatagtcattttagggacaatattaatcttccttactctcattcttctgttttgggtcattgttacttgttcttag 46622725  T
Q  552 tcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  46622724 tcaaaaatcggattttcggactacttgatcggattgctc 46622686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 301 - 602
Target Start/End: Original strand, 39149791 - 39150089
Alignment:
Q  301 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 399  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||| |||||||||||||| |||||||| ||||||| ||    
T  39149791 acggatttttccggattttgtaatccagaaact-caaaaaatagggcgcgttacatagtgtttccggattacataatccggaaaccccctaaacaccatt 39149889  T
Q  400 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 499  Q
    ||| |||||        ||||||| |||||||||||||| | |||||||||||||  ||||||| ||||||||||   ||| |||||||| |||||||||    
T  39149890 tttcaaggtaaaac---agttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatatt 39149986  T
Q  500 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    ||| ||||||||||| |||||| | |||||||||| | |||| |||||||||| ||||| ||| ||||||||||||||| ||| |||||||  |||||||    
T  39149987 aattttcctaactctcatccttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttc 39150086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 245 - 601
Target Start/End: Complemental strand, 30722044 - 30721690
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaata 343  Q
    |||||||||||||| | | || ||||||||| |||| ||| ||||||||   |||||| |||| |||   |||||||||||||| |||||||||||||||    
T  30722044 cggatttcataatctgaactggtgttttcctttgttatagagtgaaaaaaatgagttatggatgtttttagattttgtaatccgaaaacttcaaaaaata 30721945  T
Q  344 gggcgcg---ttacatgatgtttcccgattacataatccgaaaaccccc--aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaa 438  Q
    ||||||    ||||||||| ||| | |||||||||||||||| || |||  ||||||| ||||| ||||        |||||| ||||||||||||||||    
T  30721944 gggcgcaatattacatgattttttcggattacataatccgaacactcccctaaacaccatttttcaagg--gaaaaatagttcagattatataatccgaa 30721847  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattct 538  Q
     ||||||||||||||| |||||||| ||||||||   | |   |||||||||||||||||||||||||||||||||||||||| | ||||||||||||      
T  30721846 ctgtatcagcacaaattctaaacatgtttgtaac---tct---cattttagggacaatattaatcttcctaactcttatccttctgttttgggtcattga 30721753  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    |||  ||| |||||||||||| || |||||| ||||||||||||||||||||  |||||||||    
T  30721752 tacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaacttccc 30721690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 284 - 532
Target Start/End: Original strand, 33438486 - 33438731
Alignment:
Q  284 gggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaa 383  Q
    ||||||||||   ||| ||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||| || |||||||||||  | ||    
T  33438486 gggtgaaaaaataagtaacggatttttctgaattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtt-ccggattacataatgtggaa 33438584  T
Q  384 acccccaaa-cacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 482  Q
    |||| |||| |||| ||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| |||| |    
T  33438585 accctcaaaacaccatttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtc 33438681  T
Q  483 attttagggacaatattaatcttcctaactcttatccttttattttgggt 532  Q
    |||||||||||||||||||||||||||||||| |||||| | ||||||||    
T  33438682 attttagggacaatattaatcttcctaactctcatccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 432 - 590
Target Start/End: Original strand, 47123136 - 47123294
Alignment:
Q  432 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 531  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47123235  T
Q  532 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47123236 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47123294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 227 - 389
Target Start/End: Original strand, 48303898 - 48304060
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||| ||||||||||||||||||| ||||||||| ||||  |||||||||||  |||||||||||||||||||||||||||||||    
T  48303898 aaatgcccttgaggtttccagatttcataatccggaatggtgttttcctttgttaaagggtgaaaaaatgagttacggatttttccggattttgtaatcc 48303997  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 389  Q
    |||||  ||||||||||||| | |||||||||| ||| | |||||||||||||||||||||||    
T  48303998 ggaaatctcaaaaaatagggtgtgttacatgattttttcagattacataatccgaaaaccccc 48304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 432 - 590
Target Start/End: Original strand, 47130502 - 47130660
Alignment:
Q  432 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 531  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| | |  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47130601  T
Q  532 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47130602 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47130660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 497 - 602
Target Start/End: Original strand, 3938357 - 3938462
Alignment:
Q  497 attaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaac 596  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| | |||||||| ||||||||||||||||||| ||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  597 ttcccc 602  Q
    ||||||    
T  3938457 ttcccc 3938462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 425 - 598
Target Start/End: Complemental strand, 5127955 - 5127782
Alignment:
Q  425 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 524  Q
    |||||||||| ||| |||||||||| ||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| |||| |||     
T  5127955 ttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatcttcatagctctcatccatttg 5127856  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    ||||| |||||| ||| |||||||| |||||||||| | ||||||| ||||||||| | |||||| | ||||||    
T  5127855 ttttgcgtcattgttagttgttcttggtcaaaaatctggttttcggactacttgattgaattgctttgaaactt 5127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 253 - 365
Target Start/End: Complemental strand, 34821622 - 34821510
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||| ||||||| | ||||  |||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34821622 ataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacggaattttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 34821523  T
Q  353 acatgatgtttcc 365  Q
    || ||||||||||    
T  34821522 acctgatgtttcc 34821510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 416 - 588
Target Start/End: Original strand, 40062473 - 40062645
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    ||||||||||||||||||||||| | |||||||||||||  | |   | ||||||||||| ||| | | ||||  ||| ||||||||||||||||||||     
T  40062473 tagttcggattatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaactctg 40062572  T
Q  516 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgc 588  Q
     ||||||| |||| ||||||| ||| ||||||||||||||||||| | |||||||||||||||||| ||||||    
T  40062573 gtccttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgc 40062645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 459 - 602
Target Start/End: Complemental strand, 35345931 - 35345788
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 558  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||| || |||||||| |||||||| ||||  |||||| ||| |||||||||||||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaa 35345832  T
Q  559 tcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | || |||||||| || |||||||||||||||  ||||||||||    
T  35345831 ttgggttttcgggttaattgatcggattgctccgaaacttcccc 35345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 51492894 - 51493080
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||| ||||||||||| ||||  ||||||||| |||| ||| ||||||| ||| ||||  |||||| ||||||||||||||||||||||||| |    
T  51492894 agttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatattaatcttcctaactctca 51492993  T
Q  517 tccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||| | |||| ||||||| |||  ||||||||||  |||||| || |||| || |||||||||| ||||||||  ||||||||||    
T  51492994 tccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaacttcccc 51493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 465 - 590
Target Start/End: Original strand, 46624863 - 46624988
Alignment:
Q  465 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 564  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||| | |||||||||||| ||| ||||| |||||||||||||  ||    
T  46624863 tttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaaaatctaat 46624962  T
Q  565 tttcgggctacttgatcggattgctc 590  Q
    ||| || ||||||||||| |||||||    
T  46624963 ttttggactacttgatcgaattgctc 46624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 253 - 403
Target Start/End: Original strand, 45244322 - 45244469
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||  ||||||||| ||||  | | |||||||  |||||| |||||||||||||||||||||| || |||  |||||||||||||||||||    
T  45244322 ataatccggaattgtgttttcctttgttaaaagatgaaaaaatgagttatggatttttccggattttgtaattcgaaaatctcaaaaaatagggcgcgtt 45244421  T
Q  353 acatgatgtttcccgattacataatccgaaaacccccaaacaccctttttt 403  Q
    ||||||| ||| | |||||||||||| |||||   ||||||||||||||||    
T  45244422 acatgattttttcggattacataatctgaaaa---ccaaacaccctttttt 45244469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 47123039 - 47123135
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgc 349  Q
    |||||| |||||||||||||| | ||||  |||||||||||  |||| |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47123039 ataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47123135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 253 - 349
Target Start/End: Original strand, 47130405 - 47130501
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgc 349  Q
    |||||| |||||||||||||| | ||||  |||||||||||  |||| |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  47130405 ataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccgaattttgtaatccggaaacttcaaaaaatagggcgc 47130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 423 - 589
Target Start/End: Original strand, 29048444 - 29048610
Alignment:
Q  423 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 522  Q
    |||||||||||| ||| | ||||| ||||||| || || || ||||||||||| | ||  |||||| ||| ||||||||||||| ||||||||||||||     
T  29048444 gattatataatcggaactatatcaacacaaattctgaatatgtttgtaacatg-acagttattttaaggataatattaatcttcataactcttatcctta 29048542  T
Q  523 tattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgct 589  Q
    | |||| ||||||| |||  ||||||||||  ||||||| | ||||| ||||||||||||||||||||    
T  29048543 tgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatcggattgct 29048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 241 - 336
Target Start/End: Original strand, 42936590 - 42936685
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttca 336  Q
    ||||||||||||||||||||||||| ||||||||| ||||  ||||||||||| |||||||||||||||||| |||| |  ||||| |||||||||    
T  42936590 tttccggatttcataatccggaatggtgttttcctttgttaaagggtgaaaaaaggagttacggatttttccagattataaaatccagaaacttca 42936685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 590
Target Start/End: Complemental strand, 47980063 - 47979895
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 521  Q
    ||||||||||||||| |||||||||||||||  | ||||||||| ||||||  |||| ||||||| |||||||||||||||| |||||||| ||   |      
T  47980063 attatataatccgaactgtatcagcacaaattttgaacatatttataacatagatagtcattttaaggacaatattaatctttctaactctcatggatag 47979964  T
Q  522 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | ||||| ||||||| ||| ||||| ||| |||||||    |||| |||||||||||||| ||||||||    
T  47979963 tcattttaggtcattgttagttgttattaatcaaaaaatcaatttccgggctacttgatcagattgctc 47979895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 417 - 602
Target Start/End: Complemental strand, 54229961 - 54229776
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||||||||||||||| | || ||||||| ||||||| || |   | ||||||||||| ||| ||| |||| |||| |||||||||||||| ||||  |    
T  54229961 agttcggattatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatccagtttaaggaccatattaatcttccttactcgca 54229862  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    || || | || | ||||||| ||| ||||| ||||||||||||  | |||||  ||||||||||| ||||||||| ||||||||||    
T  54229861 tcattatgttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaaacttcccc 54229776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 417 - 590
Target Start/End: Complemental strand, 14828983 - 14828809
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||| ||||||||||||||||| | ||| | | ||||| ||||| || ||| ||||||| |||   |||||| ||| ||||||||||||| |||| || |    
T  14828983 agtttggattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctca 14828884  T
Q  517 tccttttattttgggtcattcttacttgttcttagtca-aaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||| | | ||||||||| || ||| ||||||||||||| |||||| |||||||||  |||||||| |||||||||    
T  14828883 tccatctgttttgggtccttgttagttgttcttagtcaaaaaatctgattttcggattacttgattggattgctc 14828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 419 - 590
Target Start/End: Original strand, 47769359 - 47769530
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    ||||||||||| |||| ||| ||||||||| ||||| || ||||| ||||||||||| |||| ||||||| | |  |||||||||||  ||||| | |||    
T  47769359 ttcggattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatc 47769458  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     || |||||| ||||||| ||| ||||||  |||| ||||   ||| |||||| || |||||||||||||||    
T  47769459 attctattttaggtcattgttagttgttcccagtcgaaaaaatgatattcgggttatttgatcggattgctc 47769530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 485 - 602
Target Start/End: Complemental strand, 4300276 - 4300159
Alignment:
Q  485 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 584  Q
    |||| ||||||||||||||||||||||| | |||||||| | || ||||||| |||  |||||||||| |||||||   |||| |||||  |||||  ||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatccagtttttgggcttattgattaga 4300177  T
Q  585 ttgctctaaaacttcccc 602  Q
    ||||||||||||||||||    
T  4300176 ttgctctaaaacttcccc 4300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 590
Target Start/End: Original strand, 33439384 - 33439449
Alignment:
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||| |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  33439384 ttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctc 33439449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 512
Target Start/End: Complemental strand, 45712148 - 45712053
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 512  Q
    |||||||||||||||||| ||| |||||||||||||||  | | ||| ||||||||||| |||  |||||||  ||| ||||||||||||||||||    
T  45712148 agttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 424 - 546
Target Start/End: Complemental strand, 27143473 - 27143351
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||| ||  ||||||||||||||| || ||||| ||||||||||| ||||  |||||| ||| ||||||||  ||||||||  | |||||| |    
T  27143473 attatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaaggataatattaagattcctaaccatcatccttct 27143374  T
Q  524 attttgggtcattcttacttgtt 546  Q
    ||||||| ||||| ||| |||||    
T  27143373 attttggatcattgttagttgtt 27143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 418 - 510
Target Start/End: Complemental strand, 26053584 - 26053491
Alignment:
Q  418 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggg-acaatattaatcttcctaa 510  Q
    |||| ||||||||||||| || ||||||| ||||||| |||||||| ||| |||| || |||| |||||||||| |||||| ||||||||||||    
T  26053584 gttctgattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaa 26053491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 417 - 536
Target Start/End: Original strand, 29035893 - 29036013
Alignment:
Q  417 agttcggattatataatccgaagtgt-atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    |||||| ||||||||||| ||| ||| |||| ||||||| |||| ||| ||||||||||| |||  ||||||| |||| |||||| |||||||||||||     
T  29035893 agttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaactctc 29035992  T
Q  516 atccttttattttgggtcatt 536  Q
    ||| || | |||| |||||||    
T  29035993 atcattatgttttaggtcatt 29036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 356
Target Start/End: Original strand, 42936685 - 42936736
Alignment:
Q  305 atttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacat 356  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||| |||||    
T  42936685 atttttccggattttgtaatccgaaaacttcaaaaaatagggtgcgctacat 42936736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 33701554 - 33701457
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg--gagttacggatttttccggattttgtaatccggaaacttca 336  Q
    |||||||||||| |||||| ||||| ||||||||| ||||  | |||||||||    |||||||| |||||||||||||  |||||||||||||||||    
T  33701554 tttccggatttcgtaatccagaatggtgttttcctttgttaaaaggtgaaaaaaaatgagttacgaatttttccggattacgtaatccggaaacttca 33701457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 521
Target Start/End: Original strand, 8735530 - 8735592
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 8735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 521
Target Start/End: Original strand, 9087771 - 9087833
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 9087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 241 - 336
Target Start/End: Original strand, 33700678 - 33700774
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtg--aaaaatggagttacggatttttccggattttgtaatccggaaacttca 336  Q
    |||| |||||||||||||||||||| ||||||||| ||||  ||||||  |||||||| |||||| |||||| ||||||  |||||||  ||||||||    
T  33700678 tttctggatttcataatccggaatggtgttttcctttgttaaagggtgaaaaaaatgg-gttacgaattttttcggattacgtaatccataaacttca 33700774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 2358110 - 2358154
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttt 271  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||    
T  2358110 aaatgcccttgaggtttccggatttcataatccggaatcatgttt 2358154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 3938849 - 3938805
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttt 271  Q
    ||||||||| ||| |||||||||||||||||||||||| ||||||    
T  3938849 aaatgcccttgaggtttccggatttcataatccggaatcatgttt 3938805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 457 - 521
Target Start/End: Complemental strand, 33842098 - 33842034
Alignment:
Q  457 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||||| ||||||| ||| |||| ||||||| ||||||||||||| ||| ||||||| ||||||    
T  33842098 taaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatcctt 33842034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 488
Target Start/End: Original strand, 29035809 - 29035880
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttta 488  Q
    ||||||||||||||||| |||| ||||| |  |||||| || ||||| ||||||||||| |||| |||||||    
T  29035809 agttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcatttta 29035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 509
Target Start/End: Original strand, 45244514 - 45244577
Alignment:
Q  446 agcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 509  Q
    ||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 536
Target Start/End: Original strand, 46555445 - 46555554
Alignment:
Q  427 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 526  Q
    |||||||| ||| ||||| |||||||||  | |  || ||| ||||||  ||| |||||||| |||| |||||||||||| ||||||| |||||| | ||    
T  46555445 atataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataactctcatccttctgtt 46555544  T
Q  527 ttgggtcatt 536  Q
    || |||||||    
T  46555545 ttaggtcatt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 227 - 602
Target Start/End: Original strand, 32441726 - 32442098
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    |||| |||| ||| ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  32441726 aaatacccttgaggtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttaaggatttttctggattttgtaatcc 32441825  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggatt 426  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| ||||||  |||||||||||       |||||||||||    
T  32441826 ggaaacttcaaaaaatagcgcgcgttacatgatgtttccggattacataatccggaaacccctaaacacatttttttaaggtaaaa---tagttcggatt 32441922  T
Q  427 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 526  Q
    ||||||||| || |||| ||||||| ||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| ||    
T  32441923 atataatccaaactgtaccagcacatatcgtaaacatatttgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatccttttgtt 32442022  T
Q  527 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  32442023 ttgggtcattgttacctgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctctgaaacttcccc 32442098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 227 - 601
Target Start/End: Complemental strand, 6229063 - 6228693
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||| ||| ||| |||| |||||||||||||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  6229063 aaatgtccttgaggtttcaggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagctacggatttttccggattttgtaaccc 6228964  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacaccc--ttttttaaggtnnnnnnntagttcgga 424  Q
    ||||||||||||||||||||||||||||||||||||||| |||||   ||| || ||||||| ||||||||  |||||||||||       |||||||||    
T  6228963 ggaaacttcaaaaaatagggcgcgttacatgatgtttccggatta---aattcggaaacccctaaacacccctttttttaaggtaaaa---tagttcgga 6228870  T
Q  425 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 524  Q
    |||||||||||||| ||||||| | ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6228869 ttatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttg 6228770  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    |||||||||||| |||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  6228769 ttttgggtcattgttacctgttcttagtcaaaaattgggttttcgggctatttgatcggattgctctaaaacttccc 6228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 227 - 601
Target Start/End: Original strand, 34972789 - 34973151
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||          ||||||     
T  34972789 aaatgcccttgaggtttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttt----------gtaatct 34972878  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||| |||||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||| |||||||||||       ||||||||||    
T  34972879 ggaaacttaaaaaaatagggcgcgttacatgatgttttcggactacataatccgaaaaccccctaaacaccattttttaaggtaaaa---tagttcggat 34972975  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34972976 tatataatccgaactgtatcagcataaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgt 34973075  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    ||| ||||||| |||  |||||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||    
T  34973076 tttaggtcattgttatctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttccc 34973151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 241 - 601
Target Start/End: Original strand, 49396937 - 49397299
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49396937 tttccggatttcataatccggaatgatgttttcctttattatagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 49397036  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    |||||  |||||||| |||||||   |||||||||||||||||| |||  ||||| | |||||||| ||       ||||||||||||||||| |||||     
T  49397037 ataggatgcgttacaagatgtttttggattacataatccgaaaatcccttaaacatcattttttaatgtaaaa---tagttcggattatataaaccgaac 49397133  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccat----tttagggacaatattaatcttcctaactcttatccttttattttgggtcat 535  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  49397134 tgtatcagcaaaaatcctaaacatatttgtaacatgtataaccatccattttagggacaatattaatcttcctaactcttatccttttgttttgagtcat 49397233  T
Q  536 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    | |||| |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  49397234 tgttacatgttcttagtcaaaaatcgggttttcgagctacttgatcggattgctctgaaacttccc 49397299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 227 - 601
Target Start/End: Complemental strand, 55052870 - 55052498
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  55052870 aaatgcccttgag-tttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgtaatcc 55052772  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||||| |||||        |||||| ||    
T  55052771 ggaaacttcaaaaaatagggcgtgttagatgatgtttccggattatataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcgaat 55052675  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta- 524  Q
    ||||||||||||| | ||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| | ||||||  |     
T  55052674 tatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttccat 55052575  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    |||| ||||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  55052574 tttttggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccc 55052498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 241 - 598
Target Start/End: Complemental strand, 6003911 - 6003556
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||| |||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||    
T  6003911 tttctggatttcataatccggaatggtggtttcctttgttatagggtgaaaaatggagttacggattttttcgaattttataatccggaaacttaaaaaa 6003812  T
Q  341 at--agggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccga 437  Q
    |   || | |||||||||||||||||| |||||||||||||| |||||||| |||||||  ||||||||||       ||||||||||||||||||||||    
T  6003811 aataagagtgcgttacatgatgtttccggattacataatccggaaaccccctaaacacc--tttttaaggtaaaa---tagttcggattatataatccga 6003717  T
Q  438 agtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattc 537  Q
    | |||||| ||||||||| ||||||||||| ||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||     
T  6003716 actgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactcttatccttttgttttgggtcattg 6003617  T
Q  538 ttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||    
T  6003616 ttacttgttcttagtcaaaaatcaggttttcgggctacttgattggattgctctgaaactt 6003556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 253 - 602
Target Start/End: Complemental strand, 25491621 - 25491274
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||||||||||| | ||||  |||||||||||  |||| |||  ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  25491621 ataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgagttttttcggattttgtaatccggaaacttcaaaaaataggacgcgtt 25491522  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||        | |||||||||||||||| ||| ||||||||||||    
T  25491521 acatgatgtttccggattacataatccggaaaccccctaaacaccttttttcaaggtaaaac---aattcggattatataatctgaactgtatcagcaca 25491425  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttag 551  Q
    ||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||    
T  25491424 aattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacatgttcttag 25491325  T
Q  552 tcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||| |||| || ||||||||||||||||||| |||| ||||||    
T  25491324 tcaaaaatcgggtttttggactacttgatcggattgctccaaaatttcccc 25491274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 242 - 590
Target Start/End: Original strand, 19835450 - 19835796
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||||||||||| | ||||  |||||||||||  |||| |||| |||||||||||||||||||||||||||||  |||||    
T  19835450 ttccggattatataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaactttgaaaaa 19835549  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||||||| |    
T  19835550 tagggtgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaact 19835646  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| || | ||||| |||||| |||    
T  19835647 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaggaacaatattaatcttcctaactctcatctttctgttttgcgtcattgtta 19835746  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | |||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  19835747 cctgtttttagtcaaaagtcgggttttcggactacttgatcggattgctc 19835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 240 - 598
Target Start/End: Original strand, 38536098 - 38536455
Alignment:
Q  240 atttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaa 339  Q
    ||||||||||||||||||||| |||| ||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  38536098 atttccggatttcataatccgaaatggtgttttcctttgttatagggtgaaaaatgaagttacgggtttttccggattttgtaattcggaaacttcaaaa 38536197  T
Q  340 aatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaa 438  Q
    ||||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||        ||||||||||||||||||  ||    
T  38536198 aatagggcgtgttacatgatgtttccagattacataatccggaaaccccctaaacaccttttttcaaggtaaaac---agttcggattatataatctaaa 38536294  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattc 537  Q
     |||||| |||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||  || |  |||| |||||||     
T  38536295 ttgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcattattctgtttttaggtcattg 38536394  T
Q  538 ttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||| ||||||||||||||||||   ||||| |||||||||||||||||| || |||||||    
T  38536395 ttacatgttcttagtcaaaaatcaagttttcaggctacttgatcggattgttccaaaactt 38536455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 262 - 589
Target Start/End: Complemental strand, 48319281 - 48318956
Alignment:
Q  262 aatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgt 361  Q
    |||||||||||| | ||||  |||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48319281 aatgatgttttcttttgttaaagggtgaaaaaatgagtgacggatttttccggattt-gtaatccggaaacttcaaaaaatagggcgcgttacatgatgt 48319183  T
Q  362 ttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaa 459  Q
    |||  ||||||||||||||||||||||| ||||||| |||||| |||||        || ||||||||||||||||||| ||||||||||||||| ||||    
T  48319182 ttctggattacataatccgaaaaccccctaaacacctttttttcaaggtaaaac---agctcggattatataatccgaactgtatcagcacaaattctaa 48319086  T
Q  460 acatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaat 559  Q
    |||| ||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||  | |||||||| ||||||    
T  48319085 acatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttatctattcttagtaaaaaat 48318986  T
Q  560 cggattttcgggctacttgatcggattgct 589  Q
    ||||||||||| ||||||||||||||||||    
T  48318985 cggattttcggactacttgatcggattgct 48318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 253 - 602
Target Start/End: Original strand, 40703604 - 40703952
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaa-atggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgt 351  Q
    |||||| |||||||||||||| | | ||  |||||||||| |  |||| ||||||||||||||||||||||||||||||| |||||||||||||| || |    
T  40703604 ataatctggaatgatgttttctttttttaaagggtgaaaagaatgagtaacggatttttccggattttgtaatccggaaatttcaaaaaatagggtgcat 40703703  T
Q  352 tacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcac 450  Q
    |||||||||||||| |||||||||| | |||||||||| ||||||||||||| |||||        |||||||||||||||||||||| |||||||||||    
T  40703704 tacatgatgtttccggattacataacctgaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcac 40703800  T
Q  451 aaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttctta 550  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||  | ||||||    
T  40703801 aaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttatcttttctta 40703900  T
Q  551 gtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||||| |||| || ||||||||||||||||||   ||||||||||    
T  40703901 gtcaaaaatcgggtttttggactacttgatcggattgctaagaaacttcccc 40703952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 242 - 599
Target Start/End: Complemental strand, 17933374 - 17933019
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  |||||| |||||||||||||| | ||||  |||||| ||||  || | |||||||||||| ||||||||||||| ||||||||||||||    
T  17933374 ttccggattatataatctggaatgatgttttcttttgttaaagggtgcaaaaatgaataacggatttttccagattttgtaatccagaaacttcaaaaaa 17933275  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||  |||||||||||||||||||        ||||||||||||||||||||||      
T  17933274 tagggcgcgttacatgatgtttccggattacataatctggaaaccccttaaacacccttttttaaggtaaaac---agttcggattatataatccgaaca 17933178  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| |||  ||||||||||||| ||||||||||||||||||| |||||| | |||||||||||| |||    
T  17933177 gtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaactctcatccttctgttttgggtcattgtta 17933078  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    | |||||||||| ||||||| ||||||| | | |||||||||||||||||  |||||||    
T  17933077 cctgttcttagtaaaaaatcagattttcagaccacttgatcggattgctccgaaacttc 17933019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 227 - 590
Target Start/End: Complemental strand, 2506285 - 2505922
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaa-tgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaat 324  Q
    ||||||||| ||| ||||||||||| |||||| | || |||||||||| | ||||  |||||||||||   |||| ||||||||||||  ||||||| ||    
T  2506285 aaatgcccttgag-tttccggattttataatcagaaaatgatgttttcttttgttaaagggtgaaaaaaatgagtaacggatttttccaaattttgtgat 2506187  T
Q  325 ccggaaacttcaaaaaata-gggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcg 422  Q
     | ||||| |||||||||| |||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        |||| |    
T  2506186 tcagaaacatcaaaaaataagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agtttg 2506090  T
Q  423 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 522  Q
    |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||     
T  2506089 gattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaattctcatccttc 2505990  T
Q  523 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | |||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  2505989 tgttttgggtcattgttacatgttcttagtcaataatcgggttttcgggctacttgatcggattgctc 2505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 241 - 602
Target Start/End: Complemental strand, 25752685 - 25752322
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgt--gttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaa 337  Q
    ||||||||||| ||||||||||||||||||||  | |  |||  | |||||||||   |||| | ||||||||||||||||||||||||||||| |||||    
T  25752685 tttccggattttataatccggaatgatgtttttttttttgttaaaaggtgaaaaaaatgagtaatggatttttccggattttgtaatccggaaatttcaa 25752586  T
Q  338 aaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccg 436  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||| |||||        |||||||||||||| |||||    
T  25752585 aaaatagggcgcattacatgatgtttccagattacataatccgaaaaccccataaacaccctttttcaaggtaaaac---agttcggattatatgatccg 25752489  T
Q  437 aagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcat 535  Q
    || ||||| ||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||| |||||||||| |||| ||| || |  |||||||| ||    
T  25752488 aaatgtattagcacaaattctaaacatgtttgtaacatggatagtcattttaaggacaatatcaatcttcctagctctcatctttatgtttttgggtgat 25752389  T
Q  536 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | |||| |||||||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||    
T  25752388 tgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcagattgctccgaaacttcccc 25752322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 326 - 602
Target Start/End: Complemental strand, 41413252 - 41412977
Alignment:
Q  326 cggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcgga 424  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||||||||       |||||||||    
T  41413252 cggaaacttcaaaaaatagga-gcgttacatgatgtttccggattacataatccggaaaccccctaaacactcttttttaaggtaaaa---tagttcgga 41413157  T
Q  425 ttatata--atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 522  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||    
T  41413156 ttatatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattt 41413057  T
Q  523 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | |||| ||||||| |||| |||||||| ||||||||| | |||||||||||||||||| ||||| ||| ||||||||||    
T  41413056 tgttttaggtcattgttacatgttcttaatcaaaaatctggttttcgggctacttgatcagattgttctgaaacttcccc 41412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 227 - 478
Target Start/End: Original strand, 23523821 - 23524071
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| |||||||  |||||||||||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||||    
T  23523821 aaatgcccttgagattttaggatttcataattcggaatgatgttttcctttgttagagggtgaaaaatggagttacggattttttcggattttgtaatcc 23523920  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatcc-gaaaacccccaaacaccc-ttttttaaggtnnnnnnntagttcgga 424  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| |||| |||||||| |||||||||||       || ||||||    
T  23523921 ggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccagaaaccccctaaacaccctttttttaaggt---aaaataattcgga 23524017  T
Q  425 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtat 478  Q
    |||||||||||  | |||||||||||||||||||||||||||||||||||||||    
T  23524018 ttatataatccacactgtatcagcacaaatcctaaacatatttgtaacatgtat 23524071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 301 - 602
Target Start/End: Complemental strand, 46440452 - 46440151
Alignment:
Q  301 acggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 399  Q
    |||| |||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  46440452 acgggtttttccgaattttataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctt 46440353  T
Q  400 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 499  Q
    ||| |||||        |||||||||||||||||||||| | ||||||||||||| ||||||||  |||||||||| |||  |||||||||||||||| |    
T  46440352 tttcaaggtaaaac---agttcggattatataatccgaactatatcagcacaaattctaaacatggttgtaacatggatattcattttagggacaatact 46440256  T
Q  500 aatcttcctaactcttatccttttattttgggtcattcttac--ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaact 597  Q
    ||||||| ||||||| |||||| | |||| | ||||| ||||   |||||||| ||||||||||||||||||| |||||||||||||||||||  |||||    
T  46440255 aatcttcataactctcatccttctcttttagatcattgttacctgtgttcttaatcaaaaatcggattttcggactacttgatcggattgctccgaaact 46440156  T
Q  598 tcccc 602  Q
    |||||    
T  46440155 tcccc 46440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 242 - 589
Target Start/End: Original strand, 7931591 - 7931931
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  |||||||||||||   ||||| | ||||  |||||||||||  |||| |||| ||||||||||||||| ||||||||||||||||||||    
T  7931591 ttccggattatataatccggaatg---ttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgcaatccggaaacttcaaaaaa 7931687  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||| |  || ||        |||||||||||||||||| ||| |    
T  7931688 tagggcgcgttacattatgtttccggattacataatccggaaaccccctaaacacccttctc-aatgtaaaac---agttcggattatataatctgaact 7931783  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
     ||| ||||||||| |||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||| |||| | | |||||||||||| |||    
T  7931784 atattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaactctcatcc-tctgttttgggtcattgtta 7931882  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 589  Q
    | |||| || |||||||||||  ||||||| ||||||| ||||||||||    
T  7931883 catgtttttggtcaaaaatcgagttttcggactacttggtcggattgct 7931931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 227 - 575
Target Start/End: Complemental strand, 3703502 - 3703155
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||  |||||||||||||||||||| | |  ||||||||| |||| ||||||||||||  ||||||||||||||| |||||||||||||||    
T  3703502 aaatgcccttgaagtttccggatttcataatccgaactagtgttttcctttgttatagggtgaaaaaatgagttacggattttttcggattttgtaatcc 3703403  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    | ||||||||||||||||| || |||||||||| ||| | ||||||||||| |||| |||||| ||||||| ||||| ||||         ||||  | |    
T  3703402 gaaaacttcaaaaaataggacgtgttacatgattttttcggattacataattcgaacaccccctaaacaccatttttcaagg--gaaaaacagttatggt 3703305  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    |||||||| | || ||||||||||||||| |||||||| ||||||||||  |||| ||||||||| | ||||||||||||| ||||||| |||||| | |    
T  3703304 tatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatattaatcttcataactctcatccttctgt 3703205  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctac 575  Q
    ||| ||||| | |||| |  | ||||||||||||||||||||||||||||    
T  3703204 tttaggtcaatgttacctacttttagtcaaaaatcggattttcgggctac 3703155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 307 - 602
Target Start/End: Original strand, 8106387 - 8106682
Alignment:
Q  307 ttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaa 405  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||  ||||||||||||||| |||||| ||||||| |||||  |    
T  8106387 ttttccggattttgtaatccgaaaacttcaaaaaatagggcgcgctacatgatttttccgtattacataatccgaacaccccctaaacaccatttttcta 8106486  T
Q  406 ggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatct 504  Q
    ||        |||||| |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| |||||||| || |||| |||||||    
T  8106487 gg--gaaaaatagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatct 8106584  T
Q  505 tcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | |||||||| |||||| | ||||| |||||| |||| |||||||| ||||||||| | |||| ||||||||||||| |||| |||  ||||||||||    
T  8106585 ttctaactctcatccttctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttcccc 8106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 421 - 600
Target Start/End: Complemental strand, 53894085 - 53893906
Alignment:
Q  421 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 520  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||    
T  53894085 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcct 53893986  T
Q  521 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    | | |||||||||||| |||| |||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  53893985 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttcc 53893906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 341 - 590
Target Start/End: Complemental strand, 31582560 - 31582313
Alignment:
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    ||||||||| ||||||||||||| | |||||||||||||| |||||||| ||||||||||||| |||||        |||||||||||||||||| |||     
T  31582560 atagggcgcattacatgatgttttctgattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaat 31582464  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||||| | ||||| ||||| ||||||||||| |||||| | |||||||||||| ||    
T  31582463 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgttttgggtcattgtt 31582364  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    || ||||||||||||||||||   ||||||||||| |||||||||||||||    
T  31582363 acatgttcttagtcaaaaatctagttttcgggctaattgatcggattgctc 31582313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 242 - 468
Target Start/End: Original strand, 29822550 - 29822773
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    ||||||||||||||||  |||||| ||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29822550 ttccggatttcataatatggaatggtgttt-cctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaa 29822648  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    ||  |||||||||||||||||| | |||||||||||||| |||||||  ||||||||| ||| |||||        | |||||||||||||||||||| |    
T  29822649 tacagcgcgttacatgatgttttcggattacataatccggaaaccccataaacaccctctttcaaggtaaaac---aattcggattatataatccgaact 29822745  T
Q  441 gtatcagcacaaatcctaaacatatttg 468  Q
    |||||||||||||| |||||||| ||||    
T  29822746 gtatcagcacaaattctaaacatgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 241 - 389
Target Start/End: Complemental strand, 25539186 - 25539038
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25539186 tttccggatttcataatccggaatggtgttttcctttgttatatggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaa 25539087  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 389  Q
    |||||||  |||||||||||||||  |||||||||||||| ||||||||    
T  25539086 atagggcatgttacatgatgtttctggattacataatccggaaaccccc 25539038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 487 - 602
Target Start/End: Complemental strand, 54631486 - 54631371
Alignment:
Q  487 tagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  54631486 tagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggatt 54631387  T
Q  587 gctctaaaacttcccc 602  Q
    |||| |||||||||||    
T  54631386 gctccaaaacttcccc 54631371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 444 - 602
Target Start/End: Original strand, 52089315 - 52089473
Alignment:
Q  444 tcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 543  Q
    |||||||||||| ||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||| | || ||| |  ||||||||||| |||| |    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacct 52089414  T
Q  544 gttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||  |||||||||||    
T  52089415 gttcttagtcaaaaatcgggtttttggactacttgatcggattgcttcaaaacttcccc 52089473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 253 - 454
Target Start/End: Complemental strand, 54631689 - 54631489
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    |||||||||||||| |||||| | ||||  |||||| ||||  |||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  54631689 ataatccggaatgacgttttcttttgttaaagggtggaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaagtatggcgcgtt 54631590  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcac 450  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||  |||||| |||||        ||||||||||||| |||| ||| |||||||||||    
T  54631589 acatgatgtttccggattacataatccggaaaccccctaaacacatttttttcaaggtaaaac---agttcggattatacaatctgaactgtatcagcac 54631493  T
Q  451 aaat 454  Q
    ||||    
T  54631492 aaat 54631489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 426 - 590
Target Start/End: Complemental strand, 27742169 - 27742004
Alignment:
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatcctttta 524  Q
    ||||||||  ||| |||||||||||||||  ||||||| ||||||||||  ||||  |||||||||| |||||||||||||||||||||| |||||| |     
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctg 27742070  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||| ||||||  ||| | |||||||||||||||||| |||||||||||||| ||||||||||||    
T  27742069 ttttgagtcattggtacattttcttagtcaaaaatcgggttttcgggctacttaatcggattgctc 27742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 441 - 590
Target Start/End: Complemental strand, 41323132 - 41322983
Alignment:
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||| ||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| |||    
T  41323132 gtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttttgtttttggtcattgtta 41323033  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     ||||||||||| |||||| |  |||||||  ||||||||||||||||||    
T  41323032 attgttcttagttaaaaattgagttttcggcatacttgatcggattgctc 41322983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 417 - 590
Target Start/End: Original strand, 7863544 - 7863717
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||| | |  ||||||| ||||||||||||| ||||||||| |||    
T  7863544 agttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaactttta 7863643  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||| | |||| |||||||  ||  |||||||| | ||||||  | |||||||||||||| ||| ||||||||    
T  7863644 tccttctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctc 7863717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 441 - 586
Target Start/End: Complemental strand, 25539019 - 25538873
Alignment:
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattctt 539  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||| ||||||    |||||||||||| ||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgtt 25538920  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
    || | |||||||||||||||  | ||||| ||||||||||| |||||    
T  25538919 acctcttcttagtcaaaaatttggttttcaggctacttgattggatt 25538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 253 - 362
Target Start/End: Complemental strand, 53894217 - 53894108
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||||||||||| | ||||  |||||||||||  || | |||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  53894217 ataatccggaatgatgttttcttttgttaaagggtgaaaaaatgactaacgggtttttccggattttgcaatcaggaaacttcaaaaaatagggcgcgtt 53894118  T
Q  353 acatgatgtt 362  Q
    ||||||||||    
T  53894117 acatgatgtt 53894108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 267 - 389
Target Start/End: Original strand, 38416520 - 38416642
Alignment:
Q  267 tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttccc 366  Q
    ||||||||| |||| ||||||||||||  ||||| ||||||||| |  |||||||||||||||||| | |||||||||||| ||||||||||| ||| |     
T  38416520 tgttttcctttgttatagggtgaaaaaatgagttgcggattttttcaaattttgtaatccggaaacataaaaaaatagggcacgttacatgattttttcg 38416619  T
Q  367 gattacataatccgaaaaccccc 389  Q
    |||||||||||||||| ||||||    
T  38416620 gattacataatccgaacaccccc 38416642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 359
Target Start/End: Complemental strand, 50392662 - 50392529
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatc 325  Q
    ||||||| | ||| |||||||||||  |||||||||| | ||||||||| ||||  || ||||||||   ||||||||||||||||||||||||||||||    
T  50392662 aaatgcctttgaggtttccggatttagtaatccggaacggtgttttcctttgttaaagagtgaaaaaaatgagttacggatttttccggattttgtaatc 50392563  T
Q  326 cggaaacttcaaaaaatagggcgcgttacatgat 359  Q
    ||||||  ||||||||| ||||||||||||||||    
T  50392562 cggaaatctcaaaaaatggggcgcgttacatgat 50392529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 590
Target Start/End: Complemental strand, 14474268 - 14474103
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||| ||| ||||||| |||||||  | ||||| ||||||||||| |||| | ||| ||  |||||||||||||||||||| || |||||| |    
T  14474268 attatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtcgtttaaga-acaatattaatcttcctaaccctcatccttct 14474170  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||| ||||||| |||| |||||||  |||||||||   |||||  ||||||||||||||||||||    
T  14474169 attttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctc 14474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 509 - 598
Target Start/End: Original strand, 29822775 - 29822864
Alignment:
Q  509 aactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||||| |||||| | |||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaactt 29822864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 417 - 558
Target Start/End: Original strand, 27879651 - 27879792
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||| |||||||||||| ||| ||||||||||||||| || |||||  |||||||||| || | ||||||| |||| |||||||| ||||||||||| |    
T  27879651 agttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctca 27879750  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaa 558  Q
    |  |||| |||| | ||||| ||| |||||| ||||||||||    
T  27879751 taattttgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 465 - 602
Target Start/End: Original strand, 47456751 - 47456888
Alignment:
Q  465 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 564  Q
    ||||||||||| ||| | | |||| |||| |||||||||||||||| ||| |||||| | |||| ||||||| |||  | |||||||||||||||  | |    
T  47456751 tttgtaacatggataactagtttaaggaccatattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggt 47456850  T
Q  565 tttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||||||| ||||||||  ||||||||||    
T  47456851 tttcgggctacttgatcagattgctccgaaacttcccc 47456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 417 - 559
Target Start/End: Original strand, 37222064 - 37222206
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa-tcttcctaactctt 515  Q
    |||||||||||||||||  ||| |||||||||| |||| |||||||| ||||||||||| ||| ||| |||| |||| ||||||| ||||| ||| |||     
T  37222064 agttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaaggaccatattaattcttcttaa-tctc 37222162  T
Q  516 atccttttattttgggtcattcttacttgttcttagtcaaaaat 559  Q
    ||| || | |||||||||||| ||| ||||||||||| ||||||    
T  37222163 atcattctgttttgggtcattgttagttgttcttagtaaaaaat 37222206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 602
Target Start/End: Original strand, 38417020 - 38417080
Alignment:
Q  542 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  38417020 ttgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttcccc 38417080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 523 - 590
Target Start/End: Complemental strand, 49001518 - 49001451
Alignment:
Q  523 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  49001518 tattttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctc 49001451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 227 - 305
Target Start/End: Complemental strand, 41413327 - 41413249
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacgga 305  Q
    ||||| ||| ||||||| ||||||||||||||||||||  |||||| || |||| ||||||||||||||||||||||||    
T  41413327 aaatgtccttgagattttcggatttcataatccggaatagtgtttttctttgttatagggtgaaaaatggagttacgga 41413249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 418 - 548
Target Start/End: Complemental strand, 42497939 - 42497809
Alignment:
Q  418 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 517  Q
    ||||||||||||||||| ||| |||||||||||||||  | | | | |||||||| | |||||| | |||| |||| ||||||||||| |||||||| ||    
T  42497939 gttcggattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcat 42497840  T
Q  518 ccttttattttgggtcattcttacttgttct 548  Q
    | |||| |||| ||||||| ||| |||||||    
T  42497839 cattttgttttaggtcattgttagttgttct 42497809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 39132661 - 39132749
Alignment:
Q  8 gaaattttggcgaaagttgctttggagtgtgaaggggtagataaaaatattaggcctactatgagtcaagtggttgagaagcttcaaag 96  Q
    ||||||||||| ||||||||||||||||||| || || ||||| | |||||||||||| |||||| || |||||||||| |||| ||||    
T  39132661 gaaattttggctaaagttgctttggagtgtgtagaggaagatagagatattaggcctaatatgagccaggtggttgagatgcttgaaag 39132749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 419 - 513
Target Start/End: Complemental strand, 49002916 - 49002822
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 513  Q
    |||| |||||||| ||| || | ||||||||||||| ||||| || ||||||||||  |||| ||||||| ||| ||||||||||||||||||||    
T  49002916 ttcgaattatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 417 - 521
Target Start/End: Complemental strand, 25140570 - 25140466
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||  |||| ||||  | |||| ||| ||| || ||||| |||||||||||||||  ||||||| | ||||||||||||||||||||||| |    
T  25140570 agttcggattacgtaattcgaatagcatcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctca 25140471  T
Q  517 tcctt 521  Q
    |||||    
T  25140470 tcctt 25140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 417 - 509
Target Start/End: Complemental strand, 25140779 - 25140687
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 509  Q
    |||||||||||  |||||||||  | |||||||| ||| || ||||| ||||||||||| |||| ||||||  ||||||||||||||||||||    
T  25140779 agttcggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttccta 25140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 427 - 514
Target Start/End: Original strand, 47784101 - 47784188
Alignment:
Q  427 atataatccgaagtgtatcagcacaaatcctaaaca-tatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 514  Q
    |||||||||||| | ||||||||||||| ||||||| | ||||||| ||| |||| ||||||| |||||||||||||| ||||||||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactct 47784188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 457 - 541
Target Start/End: Original strand, 47873953 - 47874037
Alignment:
Q  457 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 541  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||| |||||| | |||||| ||||| ||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 495 - 598
Target Start/End: Complemental strand, 55838978 - 55838875
Alignment:
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 594  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | ||||||||||||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgttagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctctaaa 55838879  T
Q  595 actt 598  Q
    ||||    
T  55838878 actt 55838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 509
Target Start/End: Complemental strand, 25140944 - 25140894
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 509  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  25140944 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 25140894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 543 - 595
Target Start/End: Complemental strand, 4936666 - 4936614
Alignment:
Q  543 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaa 595  Q
    |||||||||| ||||||| |||||| |||||| ||||||||||||||| ||||    
T  4936666 tgttcttagttaaaaatctgatttttgggctatttgatcggattgctccaaaa 4936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 495 - 591
Target Start/End: Complemental strand, 55774800 - 55774704
Alignment:
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctct 591  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | |||||||||    
T  55774800 atattaatctccctaactctaatccttatgttttaggtcattattagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctct 55774704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 558
Target Start/End: Original strand, 1788175 - 1788238
Alignment:
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 558  Q
    |||||||||||| ||||||| || ||| | |||| ||||||| ||||||||||||||| |||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaa 1788238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 490
Target Start/End: Original strand, 38416937 - 38417004
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaaca-tgtatagccattttagg 490  Q
    ||||||||||| ||| |||||||||||||||  ||||||| ||||||||| || |||| |||||||||    
T  38416937 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacattggatagtcattttagg 38417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 536
Target Start/End: Original strand, 39118308 - 39118367
Alignment:
Q  477 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 536  Q
    ||||||| |||| |||| ||||||||||| ||||||||||||||| || ||| |||||||    
T  39118308 atagccagtttaaggaccatattaatcttactaactcttatccttctaatttaggtcatt 39118367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 42660496 - 42660430
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatt 307  Q
    ||||||||||| ||||||| ||||  ||||||||| ||||  |||||||||||  ||||||||||||    
T  42660496 tttccggattttataatccagaatagtgttttcctttgttaaagggtgaaaaaatgagttacggatt 42660430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 485 - 598
Target Start/End: Original strand, 20078719 - 20078832
Alignment:
Q  485 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 584  Q
    |||| |||| |||||||| |||||| |||  |||||| | |||| ||||||| ||| |  ||||||||  |||||| | |||| |||||||||||||  |    
T  20078719 tttaaggaccatattaatattcctagctcgcatccttctgttttaggtcattgttagtctttcttagtttaaaatctggtttttgggctacttgatcaaa 20078818  T
Q  585 ttgctctaaaactt 598  Q
    ||||||| ||||||    
T  20078819 ttgctctgaaactt 20078832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 570
Target Start/End: Complemental strand, 46381180 - 46381079
Alignment:
Q  469 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 568  Q
    ||||||| ||| ||| |||| |||| |||||||||||| ||||||| || |||   |||| | ||||| ||| || |||||||||||||||| | |||||    
T  46381180 taacatggataaccagtttaaggaccatattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttc 46381081  T
Q  569 gg 570  Q
    ||    
T  46381080 gg 46381079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 4064971 - 4064598
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  4064971 aaatgcccttgag-tttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggtttttccggattatgtaatcc 4064873  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||| ||||||||||||| |||| ||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        |||||| ||    
T  4064872 ggaaactttaaaaaatagggcgtgttagatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcgaat 4064776  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta- 524  Q
    ||||||||||||| | ||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| | |||||| ||     
T  4064775 tatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttctat 4064676  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||    
T  4064675 ttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttcccc 4064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 242 - 590
Target Start/End: Original strand, 6156615 - 6156961
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6156615 ttccggatttcataatccggaatggtgttttcctttgttatatggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaa 6156714  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| ||| |||||         |||||||||||||||| |||| |    
T  6156715 tagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctctttcaaggtaaaacc---gttcggattatataatacgaatt 6156811  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    ||||||||| |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||| ||||||| |||    
T  6156812 gtatcagcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgtttttggtcattgtta 6156911  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | |||||||||| ||||| ||| |||| ||||||||||||||||||||||    
T  6156912 catgttcttagttaaaaaccgggtttttgggctacttgatcggattgctc 6156961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 242 - 590
Target Start/End: Original strand, 15799109 - 15799455
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15799109 ttccggatttcataatccggaatggtattttcctttgttatagggtgaaaaatggagttacgggtttttccggattttgtaatccggaaacttcaaaaaa 15799208  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| || ||        | ||| |||||||||||||||| |    
T  15799209 tagggcgcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaacgtaaaac---atttcagattatataatccgaact 15799305  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||| ||||||||| ||  |||||| | |||||||||||| |||    
T  15799306 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaattcgcatccttctgttttgggtcattgtta 15799405  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | |||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  15799406 catgttcttagtcaaaaatcgggtttccgggctacttgaccggattgctc 15799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 33487493 - 33487853
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  33487493 tttccggatttcataatccggaatggtgttttcctttgttacagggtgaaaaatggagttacgggtttttccgaattttgtaatccgaaaacttcaaaaa 33487592  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    ||||||||||||| ||||||||| | | |||||||||||| |||| ||| |||||||| |||| |||||        ||||||||||||||||||||||     
T  33487593 atagggcgcgttatatgatgttttcgggttacataatccggaaactccctaaacaccccttttcaaggtaaaac---agttcggattatataatccgaac 33487689  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattct 538  Q
    ||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |    
T  33487690 tgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcagtttttgggtcattgt 33487789  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||| |||||||||||||||||||  |||||||||||||||||||  ||||||  ||||||||||    
T  33487790 tacatgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaacttcccc 33487853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 243 - 602
Target Start/End: Original strand, 20891497 - 20891855
Alignment:
Q  243 tccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    ||||||||| |||||||| |||| ||||||| | | ||  | |||||||||   |||| |||||||||||||||||||||||||||||||||||||||||    
T  20891497 tccggattttataatccgaaatggtgttttcttttattaaatggtgaaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaa 20891596  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    ||||||  ||||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||        |||||||||||||||||| ||| |    
T  20891597 tagggcatgttacatgatgtttccgaattacataatccgaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaact 20891693  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||| | |||||||| ||| |||    
T  20891694 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatccttctgttttgggttattgtta 20891793  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | | |||||||||||||||||| ||||| |||||||||||||||||||||  ||||||||||    
T  20891794 cctattcttagtcaaaaatcgggttttcaggctacttgatcggattgctccgaaacttcccc 20891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 12465355 - 12464998
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||| | ||| ||| |||||||||| |||| ||||| ||||| |||   || |||||||||||||||||||||||||||||||||||||||||||||    
T  12465355 aaatgcctttgagtttttcggatttcatgatccagaatggtgtttgcct---ttatagggtgaaaaatggagttacggatttttccggattttgtaatcc 12465259  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggatt 426  Q
    |||||||||||||||||||||| |||||||||||||||| |||||   |||||| ||||||| ||||||| |||||| ||||       |||||| || |    
T  12465258 ggaaacttcaaaaaatagggcgtgttacatgatgtttccggatta---aatccggaaacccctaaacaccatttttttaggtaaaa---tagttctgagt 12465165  T
Q  427 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 526  Q
    |||||||||||         ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||| ||    
T  12465164 atataatccga---------gcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactcttatccttttgtt 12465074  T
Q  527 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||| ||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||||||| ||||| ||||    
T  12465073 ttggatcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactacccc 12464998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 245 - 590
Target Start/End: Original strand, 38871558 - 38871901
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    ||||||| ||||||||||||| ||||||| | ||||  |  || |||||  |||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  38871558 cggattttataatccggaatggtgttttcttttgttaaaaagttaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcataaaatag 38871657  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgta 443  Q
    || |||||||||||||||||| ||||||||||||||||||||| | ||||| | ||||| |||||        |||||||||||||||||||||| ||||    
T  38871658 ggggcgttacatgatgtttccggattacataatccgaaaaccctctaaacatcttttttcaaggtaaaac---agttcggattatataatccgaactgta 38871754  T
Q  444 tcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 543  Q
    ||||||||||| |||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||| | |||||||||||| |||| |    
T  38871755 tcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaactctcatccttctgttttgggtcattgttacct 38871854  T
Q  544 gttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||||||||||||||||| ||||| | |||||| ||||||||||||    
T  38871855 gttcttagtcaaaaatcgggttttcagactacttaatcggattgctc 38871901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 227 - 516
Target Start/End: Complemental strand, 26190550 - 26190263
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||| ||| ||| ||||| || ||||||||| |||||| ||||||||| | || | |||||||||||||||||||||||||||||||||||||||||||    
T  26190550 aaatgtccttgaggtttccagacttcataatctggaatggtgttttcctttcttatcgggtgaaaaatggagttacggatttttccggattttgtaatcc 26190451  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataa-tccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||||||||||||||| |||||||||||||||| | |||||||||| || |||| |||| |||||||||||||||||||       ||||||||||    
T  26190450 ggaaacttcaaaaaatagggtgcgttacatgatgttttcggattacataattcagaaaccccctaaacacccttttttaaggt---aaaatagttcggat 26190354  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| |||||||||||||    
T  26190353 tatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaaggataattttaatattcctaactctta 26190263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 242 - 602
Target Start/End: Complemental strand, 38693020 - 38692662
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggattttt-ccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||||||  ||||||||||||||||||||| | ||||  |||||||||||  |||| |||| ||||| ||| |||||||||||||||||||| |||||    
T  38693020 ttccggattatataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggttttttccgaattttgtaatccggaaacttaaaaaa 38692921  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||| ||||||||||||| |||||        |||||||||||||||||||||| |    
T  38692920 atagggcgcgttacgtgatgtttccggattacataatccggaaacccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaact 38692824  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||||| ||| ||||||| ||| || | |||||||||||| |||    
T  38692823 gtatcagcacaaattctaaacatgtttgtaacatggataatcattttaaggacaatattaatattcataactctcatctttctgttttgggtcattgtta 38692724  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |   |||||||||||||||||| ||||||| ||||||| |||||||||||  ||||||||||    
T  38692723 cccattcttagtcaaaaatcgggttttcggactacttggtcggattgctccgaaacttcccc 38692662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 254 - 590
Target Start/End: Original strand, 39524672 - 39525006
Alignment:
Q  254 taatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtta 353  Q
    ||||||| |||||||||||| | ||||  |||||||||||  |||  | |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39524672 taatccgaaatgatgttttcttttgttaaagggtgaaaaaatgagcaatggatttttccggattttgtaatccggaaacttaaaaaaatagggcgtgtta 39524771  T
Q  354 catgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaa 452  Q
    |||||||||| | ||||||||||| || |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||| |||||    
T  39524772 catgatgttttcggattacataattcggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcatcacaa 39524868  T
Q  453 atcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagt 552  Q
    || |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||    
T  39524869 attctaaacatatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagt 39524968  T
Q  553 caaaaatcggattttcgggctacttgatcggattgctc 590  Q
    | ||||| || ||||||  |||||||||| ||||||||    
T  39524969 ccaaaattgggttttcgaactacttgatcagattgctc 39525006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 245 - 602
Target Start/End: Original strand, 15957637 - 15957991
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    ||||||| |||||||| |||| ||||||| | ||||  ||||||||||||| ||| | |||||||||||||||||||||| |||||||||| ||||||||    
T  15957637 cggattttataatccgaaatggtgttttcttttgttaaagggtgaaaaatg-agtaatggatttttccggattttgtaattcggaaacttcgaaaaatag 15957735  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgta 443  Q
    ||||  ||||||||||||||| ||||| |||||||| |||||||| |||||||| |||| |||||        |||| ||||||||||||| ||| ||||    
T  15957736 ggcgtattacatgatgtttccggattaaataatccggaaaccccctaaacacccattttcaaggtaaaac---agtttggattatataatctgaactgta 15957832  T
Q  444 tcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 543  Q
    |||| |||||| |||||||| ||||||||||  ||||  ||||||||||||||||||||||||||||||||  | ||||| |||||||||||| |||| |    
T  15957833 tcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaactctggttcttttgttttgggtcattattacct 15957932  T
Q  544 gttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||    
T  15957933 gttcttagtcaaaaatcaggttttcggactacttgatcggattgctccgaaacttcccc 15957991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 253 - 590
Target Start/End: Complemental strand, 28083604 - 28083269
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||||||||||||||||| | ||||  ||||||| |||  |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| ||    
T  28083604 ataatccggaatgatgttttcttttgttaaagggtgagaaaatgagtaacgggtttttccggattttgtaatccggaaaattcaaaaaatagggcgcatt 28083505  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    ||||||| ||||| |||||||||||||| |||||| | ||||||||||||| || ||        ||| |||||||||||||||||| ||||||||||||    
T  28083504 acatgatatttccggattacataatccggaaaccctctaaacaccctttttcaacgtaaaac---agtccggattatataatccgaactgtatcagcaca 28083408  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttag 551  Q
    |||  ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| | |||||| | |||| ||||||| |||| |||||||||    
T  28083407 aattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaactttcatccttctgtttttggtcattgttacctgttcttag 28083308  T
Q  552 tcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
      ||||||||  ||||||| |||||||||||||||||||    
T  28083307 gaaaaaatcgagttttcggactacttgatcggattgctc 28083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 302 - 590
Target Start/End: Complemental strand, 32842149 - 32841861
Alignment:
Q  302 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || || || ||||  |||||||||||||||| |||||  |||||||||||    
T  32842149 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgctagataatttttcaagattacataatccgaacaccccataaacacccttt 32842050  T
Q  401 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatatt 499  Q
    || ||||         ||||||||||||||||| |||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||||||| |||||||    
T  32842049 ttcaagggaaaaac--agttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatatt 32841952  T
Q  500 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||||||||||||| |||||| ||||||| |||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32841951 aatcttcctaactctcatccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctc 32841861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 314 - 602
Target Start/End: Complemental strand, 31221504 - 31221218
Alignment:
Q  314 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnn 412  Q
    |||| ||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||| |||||| | ||||||||||||| |||||        
T  31221504 gattctgtaatccgaaaacttcaaaaaatatggcgcgttacatgatgtttctggattacataatccggaaaccctctaaacaccctttttcaaggtaaaa 31221405  T
Q  413 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 512  Q
        ||||||||||||||||||| || |||||||||||||||  ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||    
T  31221404 c---agttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaact 31221308  T
Q  513 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    || ||| || | |||||||||||| |||| |||||||||| |||||  || |||||||||||||||||||||||||||  ||||||||||    
T  31221307 ctcatctttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttcccc 31221218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 242 - 590
Target Start/End: Complemental strand, 37184019 - 37183672
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  |||||||||||| |||||||| | ||||   ||||||||||  |||| || ||||||||  ||||||||||||  ||||||||||||||    
T  37184019 ttccggattatataatccggaataatgttttcttttgttaacgggtgaaaaaatgagtaacagatttttctagattttgtaatcttgaaacttcaaaaaa 37183920  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaag 439  Q
    |||||| ||||||||||| ||| | |||||||||||||| |||||| | |||||||||||||| ||||         |||  ||||||||||||| |||     
T  37183919 tagggcacgttacatgatattttcagattacataatccggaaaccctctaaacacccttttttcaaggcaaaac---agtctggattatataatctgaac 37183823  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    ||||||| ||||||| ||||| || ||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||| |||| |||||||||||| ||    
T  37183822 tgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatctttttgttttgggtcattgtt 37183723  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  37183722 acttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctc 37183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 241 - 601
Target Start/End: Complemental strand, 24203918 - 24203564
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||| ||||||||||||| ||||||| | ||||  |||||| ||||  || | || ||||||| ||||||||||||||     ||||||||||    
T  24203918 tttccggattttataatccggaatggtgttttcttttgttaaagggtggaaaaatgattaacagattttttcggattttgtaatcg----acttcaaaaa 24203823  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| |||        ||||||| ||||||||||||||     
T  24203822 atagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttagggtaaaac---agttcgggttatataatccgaac 24203726  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    |||||||||| |||| |||||||| ||||||||  | |||  ||||||| ||||||||||||| ||||||||||| | |||| | |||||| ||||| ||    
T  24203725 tgtatcagcataaattctaaacatgtttgtaactgggataatcattttaaggacaatattaatgttcctaactctcaaccttctgttttggatcattgtt 24203626  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    || |||||||||| |||||| |  ||||||||||| |||||||||||||||  |||||||||    
T  24203625 acctgttcttagttaaaaattgagttttcgggctatttgatcggattgctccgaaacttccc 24203564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 253 - 601
Target Start/End: Complemental strand, 40620216 - 40619865
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    |||||||  |||||||||||| | ||||| |||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40620216 ataatccataatgatgttttcttttgttgaagggtgaaaaaatgagtaacagatttttccggattttgtaatccggaaacttcaaaaaatagggcacgtt 40620117  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    | ||||||||| | |||||||||||||| |||||||| ||||| | ||||| |||||       || ||| |||||||||||||||| |||||||| |||    
T  40620116 atatgatgttttcggattacataatccggaaaccccctaaacatcatttttcaaggt---aaaatatttcagattatataatccgaattgtatcagtaca 40620020  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat-ccttttattttgggtcattcttacttgttc--- 547  Q
    ||| ||||||||  |||||||||| | |  ||||||||||||||||||||||||||||||||| || |||| | |||||||||||| |||| |||||       
T  40620019 aattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatcccttctgttttgggtcattgttacctgttctta 40619920  T
Q  548 -ttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
     ||||||||||||||| ||| ||| ||||||| |||||||| ||  |||||||||    
T  40619919 attagtcaaaaatcgggtttccggactacttggtcggattgttccgaaacttccc 40619865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 283 - 602
Target Start/End: Original strand, 38372234 - 38372543
Alignment:
Q  283 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 382  Q
    |||||||||||  |||| ||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| || |    
T  38372234 agggtgaaaaaatgagtaacggatttttctggattttgtaatccggaaacttaaaaaaatagggcgggttacatgatgtttccggattacataattcgga 38372333  T
Q  383 aacccc-caaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagc 481  Q
    ||||||  ||| ||||||||| |||||        ||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||| ||||| ||||     
T  38372334 aaccccttaaataccctttttcaaggtaaaac---agttcagattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagt 38372430  T
Q  482 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 581  Q
    ||||||||||||||||||||||||||||||||| ||  ||         |||||| |||| |||||||||| |||||| || ||||||||||||||||||    
T  38372431 cattttagggacaatattaatcttcctaactctcataatt--------cgtcattgttacatgttcttagttaaaaattgggttttcgggctacttgatc 38372522  T
Q  582 ggattgctctaaaacttcccc 602  Q
    |||| ||||  ||||||||||    
T  38372523 ggatcgctccgaaacttcccc 38372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 329 - 601
Target Start/End: Original strand, 29862583 - 29862854
Alignment:
Q  329 aaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggatta 427  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||        |||||| ||||    
T  29862583 aaacttcaaaaaatagggcgcgttaggtgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcgaatta 29862679  T
Q  428 tataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttatt 526  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||||    ||    
T  29862680 tataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatccttccgttt 29862779  T
Q  527 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    |||||||||| |||| ||||||||||||||||||   |||||||||||||||||  ||||||||  |||||||||    
T  29862780 ttgggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccc 29862854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 242 - 602
Target Start/End: Complemental strand, 31929342 - 31929004
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||||||||||| | ||||  ||||||||||||| ||| |||||||||||||||||||||||||| |||| |||||||||    
T  31929342 ttccggattatataatccggaatgatgttttcttttgttaaagggtgaaaaatg-agtaacggatttttccggattttgtaatccagaaatttcaaaaaa 31929244  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    ||||||||                  ||||||||||||| |||||||| |||||||| |||| |||||        |||||||||||||||||| ||| |    
T  31929243 tagggcgc------------------attacataatccggaaaccccctaaacaccccttttcaaggtaaaac---agttcggattatataatctgaact 31929165  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    ||||||||||||||  ||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||| |||||| | ||||| |||||| |||    
T  31929164 gtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagg-acaatattaatcttcctaactctcatccttctgttttgagtcattgtta 31929066  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | |||||||||| ||||| | | |||||||||||||||||||||||||||  ||||||||||    
T  31929065 cctgttcttagttaaaaaccaggttttcgggctacttgatcggattgctccgaaacttcccc 31929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 241 - 503
Target Start/End: Original strand, 25746910 - 25747168
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||| ||||| ||||||||||||||| | ||||  |  ||||||||  |||| ||||||||||||||||||| ||||||||||||||| ||||    
T  25746910 tttccggattttataattcggaatgatgttttcttttgtt-aaaagtgaaaaaatgagtaacggatttttccggattttctaatccggaaacttc-aaaa 25747007  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatcc-gaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    ||||||||||||||||||||||| | ||||||||||||| |||| |||| ||||||| |||||||||||        ||||||||||||||||||||||     
T  25747008 atagggcgcgttacatgatgttttcggattacataatccggaaatcccctaaacaccattttttaaggtaaaac---agttcggattatataatccgaac 25747104  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatc 503  Q
    ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||| |||||||    
T  25747105 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 227 - 403
Target Start/End: Original strand, 26318987 - 26319163
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| | | ||||||||||||||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  26318987 aaatgcccttgcggtttccggatttcataattcggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgttatcc 26319086  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 403  Q
    |||||||||  ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  26319087 ggaaacttc-caaaatagggtgcgttacatgatgtttccggattacataatccgaaaaccccctaaacaccctttttt 26319163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 227 - 590
Target Start/End: Original strand, 27212577 - 27212934
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||| | || |||| |||||||||||||||| | |||||||||||| |||| ||||||||||||  ||||||||| ||||| |||||||||||||||    
T  27212577 aaatgcctttgaaattttcggatttcataatccgaactgatgttttcctttgttatagggtgaaaaaatgagttacgggttttttcggattttgtaatcc 27212676  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaac-ccccaaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    | |||  ||||||||||||| |||||||||||| ||| | |||||||||| | ||| || |||  |||||||||||| ||||         |||||||||    
T  27212677 gaaaatctcaaaaaatagggtgcgttacatgattttttcggattacataaccagaacacaccctgaacaccctttttgaagg--gaaaaacagttcggat 27212774  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    |||||||| |||| | |||||| ||||||  ||||||| ||||||||||  |||| |||     | ||||||||||||||||||||||| |||||| |      
T  27212775 tatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatagtcat-----gaacaatattaatcttcctaactctcatccttctgg 27212869  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||| |||||| |||| |||||||||||||||||||| ||||||| ||| ||||| |||||||||    
T  27212870 tttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgctc 27212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 7884250 - 7884435
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||| ||||||||||| ||| ||||||| ||||||| ||||| || ||||||| |||||| | ||||||||||||||||||||||||||||||||| |    
T  7884250 agttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaactctca 7884349  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||| | |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  7884350 tccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccc 7884435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 227 - 403
Target Start/End: Complemental strand, 37095165 - 37094991
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||| || |||||||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37095165 aaatgcccttgaggttttcgaatttcataatccggaatggtgttt-cctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatcc 37095067  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacaccctttttt 403  Q
    | |||||| |||||||| ||||||||||||||||||||| ||||||  |||||||||||||  ||||||||||||||    
T  37095066 gaaaactt-aaaaaataaggcgcgttacatgatgtttccggattaccaaatccgaaaacccttaaacaccctttttt 37094991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 437 - 602
Target Start/End: Original strand, 14111944 - 14112107
Alignment:
Q  437 aagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 536  Q
    ||||||||||||||||||  |||| || ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||  ||||||||||| |||    
T  14111944 aagtgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcc--ttattttgggttatt 14112041  T
Q  537 cttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
     ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||  ||||||||||    
T  14112042 gttacttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaacttcccc 14112107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 302 - 602
Target Start/End: Original strand, 26095035 - 26095334
Alignment:
Q  302 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 400  Q
    ||||||||| | |||||||||||||  ||||  |||||||||| |||||||||||  | ||| | |||||||||||||||| |||||  |||||| ||||    
T  26095035 cggattttttctgattttgtaatccaaaaaccacaaaaaatagagcgcgttacatatttttttcggattacataatccgaacaccccataaacactcttt 26095134  T
Q  401 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatta 500  Q
    || || |        ||||||||||||||||||| ||| ||||||| || |||| |||||||| ||||||||||| |||| ||| ||| |||||||||||    
T  26095135 ttcaaag--gaaaaatagttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatatta 26095232  T
Q  501 atcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    |||||| ||||||| || ||| ||||||| |||||| ||   |||| | ||| ||||||||| |||| |||||||||| || ||||||||  ||||||||    
T  26095233 atcttcttaactctcattcttctattttgtgtcattgttggctgttttcagtaaaaaatcgggtttttgggctacttgttcagattgctccgaaacttcc 26095332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 12847500 - 12847685
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||||| ||| |||||||||| ||||||||||||||| || ||||| ||||||||||  |||  ||||||| |||||||||||||||||| ||||||      
T  12847500 agttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatattaatcttcccaactctcg 12847599  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |  || | |||||| ||||| |||  |||||||||||||||||||  ||||||||||||||||||  ||| |||| ||||||||||    
T  12847600 tatttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaacttcccc 12847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 417 - 590
Target Start/End: Original strand, 13908605 - 13908778
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||||||| ||||||| || ||||  ||||||| ||||||||| | |||| ||||||| ||||||||||||||||| ||||  | |    
T  13908605 agttcggattatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaaccttca 13908704  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||| | ||||| |||||| |||  ||||||| |||||||||| | ||||| | |||||||||||||||||||    
T  13908705 tccttctcttttgagtcattgttagctgttctttgtcaaaaatcaggttttcagactacttgatcggattgctc 13908778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 231 - 403
Target Start/End: Original strand, 34440617 - 34440779
Alignment:
Q  231 gccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaa 330  Q
    ||||| ||| |||||| ||||||||||| | |||||||||||||| |||| |||||| |||||||||||||||||||||          |||||||| ||    
T  34440617 gcccttgaggtttccgaatttcataatctgaaatgatgttttcctttgttatagggtaaaaaatggagttacggatttt----------gtaatccgaaa 34440706  T
Q  331 acttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 403  Q
    |||||||||| |||| ||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||    
T  34440707 acttcaaaaa-taggacgcgttacatgatgttttcggattgcataatccgaaaaccccctaaacaccctttttt 34440779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 241 - 403
Target Start/End: Complemental strand, 36359824 - 36359661
Alignment:
Q  241 tttccggatttcataatccggaatga-tgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaa 339  Q
    |||||||||||||||||| ||||||  ||||||| | ||||  ||||||||||||| ||||||||| |||| ||||||||||||||| ||||  ||||||    
T  36359824 tttccggatttcataatctggaatgggtgttttcttttgttaaagggtgaaaaatg-agttacggaatttttcggattttgtaatccagaaatctcaaaa 36359726  T
Q  340 aatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctttttt 403  Q
    |||||| ||||| ||||||| ||| | |||||||||||| |||||||||| ||||||| ||||||    
T  36359725 aataggacgcgtaacatgattttttcggattacataatctgaaaaccccctaaacaccttttttt 36359661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 602
Target Start/End: Original strand, 23269391 - 23269579
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagca---caaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 513  Q
    ||||| |||||||||||||||| | ||||| ||   ||| | || ||||| ||||||||||| | |  ||||||| ||||||||||||||||||||||||    
T  23269391 agttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaatattaatcttcctaactc 23269490  T
Q  514 ttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    | || ||| |||| ||||| ||  |||  |||||||| ||||||||||| ||||||||||||||||||||||||||   ||||||||||    
T  23269491 tcattcttctattctgggttatagttagatgttcttattcaaaaatcgggttttcgggctacttgatcggattgcttcgaaacttcccc 23269579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 420 - 590
Target Start/End: Original strand, 27158144 - 27158314
Alignment:
Q  420 tcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 519  Q
    ||||||||||||||| ||| |||||||||||||||  | ||||| |||| |||||| |||| ||||||| |||||||||||| ||||||||  || ||||    
T  27158144 tcggattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatcc 27158243  T
Q  520 ttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||   |||||||||||| ||| ||||| ||| | ||||||  | ||||| |||||||||||| ||||||||    
T  27158244 ttcacttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctc 27158314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 494 - 590
Target Start/End: Complemental strand, 26898790 - 26898694
Alignment:
Q  494 aatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||||||||||||||||||| |||||| | ||||| |||||| |||  |||||||||||||||||||  |||||||||||||||||||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctc 26898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 312 - 402
Target Start/End: Original strand, 14111851 - 14111942
Alignment:
Q  312 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaa-cccccaaacacccttttt 402  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| |||| |||||||||||||    
T  14111851 cggattttgtaatccagaaacttcaaaaaatagggcgcgttacatgatgtttttggattacataatctgaaaatcccctaaacacccttttt 14111942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 228 - 403
Target Start/End: Original strand, 38640590 - 38640767
Alignment:
Q  228 aatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg--gagttacggatttttccggattttgtaatc 325  Q
    |||||||| ||  ||||||||||| |||||| |||||| ||||||||| ||||  |||||||||||    ||| ||| ||  ||| |||||||| |||||    
T  38640590 aatgcccttgaagtttccggattttataatctggaatggtgttttcctttgttaaagggtgaaaaaaaatgagctacagagattttcggattttataatc 38640689  T
Q  326 cggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacaccctttttt 403  Q
     |||||  |||||||||||||||||||| ||||| | | | |||||||||||||||| ||||| ||||||||||||||    
T  38640690 tggaaatctcaaaaaatagggcgcgttaaatgatttattcggattacataatccgaacacccctaaacaccctttttt 38640767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 8032217 - 8032321
Alignment:
Q  304 gatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacc-cccaaacacccttttt 402  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||| | ||||||||| ||||| |||||||||||||||| ||| || |||||||||||||    
T  8032217 gattttttcggattttgtaatctggaaatttcaaaaaatagggcacattacatgatttttccggattacataatccgaacacctcctaaacacccttttt 8032316  T
Q  403 taagg 407  Q
     ||||    
T  8032317 caagg 8032321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 417 - 600
Target Start/End: Complemental strand, 40613739 - 40613556
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||||||| ||||| |||| ||||  | ||||| ||||||||||| |||   |||||| ||||| ||||||||||||||||| | |    
T  40613739 agttcggattatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaaggacattattaatcttcctaactttca 40613640  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    ||||| | | || |||||||  ||  |||||||||| |||||||   |||| | ||||||||||| ||||||||  ||||||||    
T  40613639 tccttatgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatcagattgctccgaaacttcc 40613556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 417 - 586
Target Start/End: Complemental strand, 41639557 - 41639385
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||| ||||||||||||||||| ||||||||||||||| || |   | ||||||||||  ||| ||| ||||  |||||||||||| | ||||||||| |    
T  41639557 agtttggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaactctca 41639458  T
Q  517 tccttttattttgggtcattcttacttgttcttagt---caaaaatcggattttcgggctacttgatcggatt 586  Q
    || |||| |||| ||||||| ||| |||||||||||    ||||||| ||||||| |||||||||||| ||||    
T  41639457 tctttttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 423 - 528
Target Start/End: Original strand, 21070429 - 21070534
Alignment:
Q  423 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 522  Q
    ||||||||||||| || || ||||| |||||| || ||||||||||||||||  |||| ||||||| ||||||||||||||||| |||| || |||| ||    
T  21070429 gattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatcttcataaccctcatccatt 21070528  T
Q  523 tatttt 528  Q
    ||||||    
T  21070529 tatttt 21070534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 528
Target Start/End: Complemental strand, 8739050 - 8738938
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    |||||||||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| | |||||||||||||||||||||||     
T  8739050 tagttcggattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctc 8738951  T
Q  516 atccttttatttt 528  Q
    |||| | ||||||    
T  8738950 atccctgtatttt 8738938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 424 - 590
Target Start/End: Complemental strand, 6800984 - 6800818
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||  ||| |||||||||| ||||  | ||||| |||| |||||| | || ||||||| |||||||  |||||||||| | ||| |||||| |    
T  6800984 attatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatccttct 6800885  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     |||| ||||||| |||  |||||||||||||||||| | ||||||  ||||||||||  |||||||    
T  6800884 gttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctc 6800818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 536 - 602
Target Start/End: Complemental strand, 26190267 - 26190201
Alignment:
Q  536 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  26190267 tcttacctgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttcccc 26190201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 417 - 511
Target Start/End: Complemental strand, 27494217 - 27494123
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaac 511  Q
    |||||||||||  | |||| || || | |||||| ||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  27494217 agttcggattacgtgatccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaac 27494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 601
Target Start/End: Original strand, 33901094 - 33901200
Alignment:
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 594  Q
    ||||||||||||||||||| ||||||| | |||| ||||||| ||| ||||| ||||||||||||  ||||||| | ||| |||||| ||||||||  ||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  595 acttccc 601  Q
    |||||||    
T  33901194 acttccc 33901200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 521
Target Start/End: Original strand, 16429339 - 16429443
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||  |||||| || |  |||||||| ||| || ||||| ||||||||||| |||| | ||||| |||||||||||||||||| ||||||||    
T  16429339 agttcggattacctaatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactctta 16429438  T
Q  517 tcctt 521  Q
    |||||    
T  16429439 tcctt 16429443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 416 - 532
Target Start/End: Original strand, 26093502 - 26093618
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    |||||| ||||||||||||| || | |||||||| ||||  | ||||| ||| ||||||| |||| ||||||| |||||| |||||||||| |||||||     
T  26093502 tagttcagattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatggacaaaattaatcttcttaactctc 26093601  T
Q  516 atccttttattttgggt 532  Q
    |||||| | ||||||||    
T  26093602 atccttctgttttgggt 26093618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 417 - 600
Target Start/End: Original strand, 26622170 - 26622350
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||||||||||||||| |||| |||||||||||||||    ||  | ||||||||||   || |||  ||| |||| ||||||| |||||||||| | |    
T  26622170 agttcggattatataattcgaactgtatcagcacaaatttcgaatttgtttgtaacatag-taaccagattaaggaccatattaaacttcctaactttca 26622268  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    ||||| |||||| ||| ||| ||| |||||  |||||||||||| | ||||||| |||||||||| ||||||||  ||||||||    
T  26622269 tccttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaacttcc 26622350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 419 - 521
Target Start/End: Complemental strand, 8739250 - 8739148
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    |||||||||  |||||| || || | |||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||| |||    
T  8739250 ttcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatc 8739151  T
Q  519 ctt 521  Q
    |||    
T  8739150 ctt 8739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 417 - 501
Target Start/End: Complemental strand, 1350374 - 1350290
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa 501  Q
    ||||||||||||||||| | || | ||||| ||||||| |||||||| ||||||||||| ||| |||||||| ||| ||||||||    
T  1350374 agttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataatattaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 419 - 590
Target Start/End: Original strand, 41253359 - 41253530
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    ||||||||||||||| |||| |||| |||||| |||  | ||| | ||||||||||| ||| | | |||| | || |||||||||||||||||| | |||    
T  41253359 ttcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatattaatcttcctaactatcatc 41253458  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||  | |||| ||||||| ||| |||||| || | |||||||  | || ||||| |||||||| ||||||||    
T  41253459 ctcctgttttaggtcattgttagttgttcctaataaaaaatccaaattccgggccacttgatcagattgctc 41253530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 459 - 521
Target Start/End: Complemental strand, 28445231 - 28445169
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||| |||||||||||||| | | ||||| ||||||||||||||||||||||||| ||||||    
T  28445231 aacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatcctt 28445169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 246 - 359
Target Start/End: Original strand, 34529913 - 34530029
Alignment:
Q  246 ggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttc---cggattttgtaatccggaaacttcaaaaaat 342  Q
    ||||||||||||||| | | |  ||||||| |||| |||| |||||||  ||||| |||||||||    |||||||||||||||  |||| |||||||||    
T  34529913 ggatttcataatccgaacttagtttttcctttgttataggatgaaaaaatgagttgcggatttttttttcggattttgtaatccaaaaacctcaaaaaat 34530012  T
Q  343 agggcgcgttacatgat 359  Q
    |||||| ||||||||||    
T  34530013 agggcgtgttacatgat 34530029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 499 - 580
Target Start/End: Original strand, 7036677 - 7036758
Alignment:
Q  499 taatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 580  Q
    ||||||||||||||||||||||| ||| || ||||||| ||  ||||||  ||| ||||||| ||||||||||||| |||||    
T  7036677 taatcttcctaactcttatccttctatattaggtcattgttggttgttcacagttaaaaatctgattttcgggctatttgat 7036758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 253 - 359
Target Start/End: Complemental strand, 43388297 - 43388189
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatg--gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcg 350  Q
    |||||||| |||| ||||||||| ||||  || ||||||||    |||||||||||| ||  |||||||||||||||||||  | ||||||||||||||     
T  43388297 ataatccgaaatggtgttttcctttgttaaagtgtgaaaaaaaatgagttacggattcttttggattttgtaatccggaaatctaaaaaaatagggcgca 43388198  T
Q  351 ttacatgat 359  Q
    |||||||||    
T  43388197 ttacatgat 43388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 512
Target Start/End: Original strand, 34530300 - 34530367
Alignment:
Q  445 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 512  Q
    |||||| ||| || ||||| |||||||||||  ||| ||||||| |||||||||||||||||||||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaact 34530367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 521
Target Start/End: Complemental strand, 8973631 - 8973569
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||| ||||||||||| |||  ||||||| |||||||||||| |||||||||||| ||||||    
T  8973631 aacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatcctt 8973569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Complemental strand, 1350516 - 1350451
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaa 292  Q
    ||||||||| || |||| |||||||||||||||| | || ||||||||| |||| |||||||||||    
T  1350516 aaatgcccttgaaattttcggatttcataatccgaactggtgttttcctttgttatagggtgaaaa 1350451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 559
Target Start/End: Complemental strand, 11186234 - 11186097
Alignment:
Q  422 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||||||||||||||| |||||||||| |||| || |   ||||||||||||| ||| ||  ||||  ||| |||||||| ||| | ||||| ||||||    
T  11186234 ggattatataatccgaactgtatcagcataaattctgagtctatttgtaacatggataaccgatttaatgaccatattaattttcttgactctcatcctt 11186135  T
Q  522 ttattttgggtcattcttacttgttcttagtcaaaaat 559  Q
     | |||| ||| ||| |||  |||||||||| ||||||    
T  11186134 ctgttttaggtaattgttagatgttcttagtaaaaaat 11186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 16429168 - 16429240
Alignment:
Q  456 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 528  Q
    |||||||| ||||||||||| |||| |||||||  || |||| |||||||| ||||||| |||||| ||||||    
T  16429168 ctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatccttgtatttt 16429240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 445 - 505
Target Start/End: Complemental strand, 28445441 - 28445381
Alignment:
Q  445 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctt 505  Q
    |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  28445441 cagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatctt 28445381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 28108277 - 28108354
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaa 331  Q
    ||||||||||||||||||||| | ||||  ||| ||| |||  |||| |||| ||||||| ||||||||||||||||||    
T  28108277 ataatccggaatgatgttttcttttgttaaagg-tgagaaaatgagtaacgggtttttccagattttgtaatccggaaa 28108354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 237 - 271
Target Start/End: Original strand, 38030765 - 38030799
Alignment:
Q  237 gagatttccggatttcataatccggaatgatgttt 271  Q
    ||||||||||||||||||||||||||||| |||||    
T  38030765 gagatttccggatttcataatccggaatggtgttt 38030799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 509
Target Start/End: Original strand, 38641033 - 38641083
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 509  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||    
T  38641033 aacatgtttgtaacatagatagtcattttaaggacaatattaatcttccta 38641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 241 - 570
Target Start/End: Complemental strand, 36949178 - 36948851
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||| ||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  36949178 tttccagatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacggatttttccggattttgtaatctgcaaacttcaaaaa 36949079  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||| ||||||| ||| |||||||       ||||| |||||||||||||| ||     
T  36949078 atagggcgcgttacatgatgttttcggattacataatccggaaaccccctaaacaccatttgttaaggt---aaaatagtttggattatataatccaaac 36948982  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||    
T  36948981 tgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgttttgggtaattgtt 36948882  T
Q  540 acttgttcttagtcaaaaatcggattttcgg 570  Q
    || ||||||||||||||||| || |||||||    
T  36948881 acctgttcttagtcaaaaattgggttttcgg 36948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 242 - 602
Target Start/End: Complemental strand, 32188102 - 32187743
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||||||  ||||||||||||||||||||| | ||||  |||||||||||   |||| |||| |||||| ||||||||||||| ||||||||||||||    
T  32188102 ttccggattgtataatccggaatgatgttttcttttgttaaagggtgaaaaaaatgagtaacgggtttttctggattttgtaatctggaaacttcaaaaa 32188003  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||        ||||||||||||||||||||||     
T  32188002 atagggcgagttacatgatgtttccggattacataatccggaaacccccgaaacaccatttttcaaggtaaaac---agttcggattatataatccgaac 32187906  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    |||||||||||||||  |||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||    
T  32187905 tgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgtt 32187806  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    || ||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  32187805 acctgttcttggtcaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 32187743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 259 - 601
Target Start/End: Original strand, 39447101 - 39447441
Alignment:
Q  259 cggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatga 358  Q
    ||||||||||||||| | ||||  |||||||||||  |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  39447101 cggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccgaaaacttcaaaaaatagggcgcattacatga 39447200  T
Q  359 tgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcct 457  Q
    ||||| | |||||||||||| | |||||||  ||||||||||||| |||||       |||||||||||||||||| | || ||||||||||||||| ||    
T  39447201 tgttttcggattacataatctggaaaccccataaacaccctttttcaaggtaaaa---tagttcggattatataattcaaactgtatcagcacaaattct 39447297  T
Q  458 aaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaa 557  Q
    |||||| ||||||||||| |||| |||||||  |||||||||||||||||||||||| |||||| |||||||||||||| |||| |||||||||||||||    
T  39447298 aaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttctattttgggtcattgttacatgttcttagtcaaaa 39447397  T
Q  558 atcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    ||||| | ||| | || ||||||||||||||||| |||||||||    
T  39447398 atcgggtcttccgactgcttgatcggattgctctgaaacttccc 39447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 242 - 590
Target Start/End: Complemental strand, 33452675 - 33452329
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  |||||||| |||||||||||| | ||||  |||||| ||||  |||| ||||||||||| |||||||||||| ||||||||||||||||    
T  33452675 ttccggattatataatccgaaatgatgttttcttttgttaaagggtggaaaaatgagtaacggatttttctggattttgtaattcggaaacttcaaaaaa 33452576  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| ||| |||||||||| |||| ||| ||||||||||||| |||||        |||||||||||||||||||||| |    
T  33452575 tagggcgcgttacatgatgtttccggatcacataatccggaaactccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaact 33452479  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||| ||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| || ||||| ||||||||| || |||    
T  33452478 gtattagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcattcttttgttttgggtctttgtta 33452379  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
      |||||||||||||||||||| |||  || |||||||||||||||||||    
T  33452378 tctgttcttagtcaaaaatcgggtttctggactacttgatcggattgctc 33452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 245 - 602
Target Start/End: Complemental strand, 15995343 - 15994987
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa-ta 343  Q
    ||||||| ||||||||||||| ||||||| | ||||  |||||||||||   ||| |||| |||||||||||||||||||| ||||||||||||||| ||    
T  15995343 cggattttataatccggaatggtgttttcttttgttaaagggtgaaaaaattagtaacgggtttttccggattttgtaatcgggaaacttcaaaaaaata 15995244  T
Q  344 gggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgt 442  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |        ||||||||||||||||| |||| |||    
T  15995243 gggcgcgttgcatgatgtttccggattacataatccgaaaaccccctaaacaccctttttcaagctaaaac---agttcggattatataattcgaactgt 15995147  T
Q  443 atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttact 542  Q
    ||||||| |||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||| |||||||| ||| || | |||||||||||| ||||     
T  15995146 atcagcaaaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatctttctaactctcatcattctgttttgggtcattgttaca 15995047  T
Q  543 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||| |||||| |||||||| | ||| |||||||||||||||  ||||||||||    
T  15995046 tgttcttagtaaaaaattggattttcagactatttgatcggattgctccgaaacttcccc 15994987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 253 - 570
Target Start/End: Complemental strand, 44465949 - 44465633
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||||| ||||||||||||| | ||||  |||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44465949 ataatccagaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 44465850  T
Q  353 acatgat-gtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcac 450  Q
    ||||||| ||||   ||||||||| |||| |||||||| ||||||||||||| |||||        |||||||||||||||||||||| |||||||||||    
T  44465849 acatgatagtttatggattacatactccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaaatgtatcagcac 44465753  T
Q  451 aaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttctta 550  Q
    |||| |||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| | ||||||    
T  44465752 aaattctaaacatgtttgtaacatggttagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctcttctta 44465653  T
Q  551 gtcaaaaatcggattttcgg 570  Q
    |||||||||| | |||||||    
T  44465652 gtcaaaaatcaggttttcgg 44465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 296 - 601
Target Start/End: Complemental strand, 41510606 - 41510304
Alignment:
Q  296 gagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaaca 394  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| | |||||||| |||||    
T  41510606 gagtaacggatttttccagatttcgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttctggattacataatctggaaaccccctaaaca 41510507  T
Q  395 cccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggaca 494  Q
    ||| |||| |||||        ||| |||||||||||||| ||| ||||||||||||| | |||||||| ||||||||||| |||| |||||||||||||    
T  41510506 ccccttttcaaggtaaaac---agtccggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatg-atagtcattttagggaca 41510411  T
Q  495 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 594  Q
    |||||||||||||||||||| |||||| | |||||||||||| ||||||||||||||| |||||  || |||||||||||||||||||||||||||  ||    
T  41510410 atattaatcttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaa 41510311  T
Q  595 acttccc 601  Q
    |||||||    
T  41510310 acttccc 41510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 242 - 559
Target Start/End: Complemental strand, 45154023 - 45153708
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  ||||||||||||||||||||| | ||||  |||||||||||  |||| |||| |||||| | ||||||||||| |||||||||||||||    
T  45154023 ttccggattatataatccggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttctgaattttgtaatctggaaacttcaaaaaa 45153924  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||        ||||  |||||||||||  ||| |    
T  45153923 tagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agtttagattatataatttgaact 45153827  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    |||||||||||| |  ||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||| | |||||||||||| |||    
T  45153826 gtatcagcacaagttataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcatccttctgttttgggtcattgtta 45153727  T
Q  541 cttgttcttagtcaaaaat 559  Q
    | ||||||||||| |||||    
T  45153726 cctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 312 - 602
Target Start/End: Complemental strand, 41855061 - 41854778
Alignment:
Q  312 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 410  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||| ||||| |||||||| ||||||||||||| |||||      
T  41855061 cggattttgtaatccggaaacttcaaaaaatagggtgtgttacatgatgtttccggattacatgatccggaaaccccctaaacaccctttttcaaggtaa 41854962  T
Q  411 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 510  Q
          |||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||     |||| ||||| |||||||||||||||||||||||    
T  41854961 aac---agttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaa 41854870  T
Q  511 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||| |||||| | ||||| |||||| |||  |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  41854869 ctctcatccttctgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctctgaaacttcccc 41854778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 4329411 - 4329251
Alignment:
Q  8 gaaattttggcgaaagttgctttggagtgtgaaggggtagataaaaatattaggcctactatgagtcaagtggttgagaagcttcaaagaaatgaaatag 107  Q
    ||||||||||| |||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4329411 gaaattttggccaaagttgctttgaagtgtgtagaggtagataaaaatattaggcctactatgagtcaggtggttgagaagcttcaaagaaatgaaatag 4329312  T
Q  108 attcctaggtctcttaatgagtgatgcatgatgttaaattagattccttcgtttgcaaata 168  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4329311 attcctaggtctcttaatgagtgatacatgatgttaaattagattccttcgtttgcaaata 4329251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 241 - 590
Target Start/End: Complemental strand, 25218023 - 25217660
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||| |||||| |||||||| |||||||||||| | ||||  |||||||||||  |||| |||||||||| |||||||||||||||||||||||||||||    
T  25218023 tttctggattttataatccgcaatgatgttttcttttgttaaagggtgaaaaaatgagtaacggattttttcggattttgtaatccggaaacttcaaaaa 25217924  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataat------- 433  Q
    |||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||| |||| |||||        |||||||||||||||||           
T  25217923 atagggtgcgttacatgatgtttccggattacataatccggaaacccctaaacaccccttttcaaggtaaaac---agttcggattatataattgtagat 25217827  T
Q  434 ---------ccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-tt 523  Q
             | ||| ||||| ||||||||| |||||||| |||||| |||| |||| |||||| |||||||| |||||||||||||||||  ||||| |     
T  25217826 aatataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctcttccttctg 25217727  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     |||||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  25217726 tttttgggtcattgttacctgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctc 25217660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 312 - 602
Target Start/End: Original strand, 42894369 - 42894657
Alignment:
Q  312 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnn 410  Q
    |||||| | |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||| |||||      
T  42894369 cggattatataatccggaaacttaaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccatttttcaaggtaa 42894468  T
Q  411 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 510  Q
          ||| ||||||||||| |||||| ||||||||||||||| |||||||| ||| ||||||| |||  |||||||||||||||||||||||||||||    
T  42894469 aac---agtccggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaa 42894565  T
Q  511 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||  ||||| | |||||||||||| |||| ||||||||| |||||||||  ||||||| ||||||||||||||| |||  ||||||||||    
T  42894566 ctctcttccttctgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttcccc 42894657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 242 - 568
Target Start/End: Complemental strand, 17475033 - 17474707
Alignment:
Q  242 ttccggatttcataatccgg--aatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaa 339  Q
    |||||||||  |||||||||  ||| |||||||| | ||||  | |||||||||  |||| |||||||||||||||||||||||||||||||||| ||||    
T  17475033 ttccggattatataatccggggaataatgttttcttttgttaaaaggtgaaaaaatgagtaacggatttttccggattttgtaatccggaaactttaaaa 17474934  T
Q  340 aatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaa 438  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||  ||||| |||||        |||| |||||||||||||||||    
T  17474933 aatagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacaatttttcaaggtaaaac---agtttggattatataatccgaa 17474837  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattct 538  Q
     |||||||||||||||  ||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||| ||  || | || || | |||| |    
T  17474836 ctgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctcataattctgttatgcggcattgt 17474737  T
Q  539 tacttgttcttagtcaaaaatcggattttc 568  Q
    ||| ||||||| |||||||||||| |||||    
T  17474736 tacctgttcttcgtcaaaaatcgggttttc 17474707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 227 - 602
Target Start/End: Original strand, 5507323 - 5507699
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||  ||| ||| |||||||||||| | |  ||||||||| |||| || |||||||||  ||||||| ||||||| || ||||||||||||    
T  5507323 aaatgcccttgaagttttcgggtttcataatccgaactagtgttttcctttgttatatggtgaaaaaatgagttacagattttttcgaattttgtaatcc 5507422  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttc--ccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcgg 423  Q
      ||||||||||||||| | ||||||||||||| |||   | ||||| |||||||||| |||||| ||||||| ||| ||||||        ||||||||    
T  5507423 aaaaacttcaaaaaataagacgcgttacatgattttttttcggattatataatccgaacaccccctaaacaccttttcttaagg--aaaaaatagttcgg 5507520  T
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||   |||||||||||||||  |||||| || ||| |    
T  5507521 attatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttataaacaatattaatcttcacaactctcattcttct 5507620  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
     ||||||||||||  ||| |||||||||||||||||| | ||||||||| |||||||||||||||||  ||||||||||    
T  5507621 gttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatcggattgctccgaaacttcccc 5507699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 302 - 602
Target Start/End: Complemental strand, 41203358 - 41203060
Alignment:
Q  302 cggatttttccggattttgtaatccggaaacttcaaaaaa-tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacaccctt 399  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||  ||||| || ||||  |||||||||||||||| |||||  ||||||||||    
T  41203358 cggatttttccggattttgtaatccggaaactacaaaaaaatagggtgc--tacataatttttctggattacataatccgaacaccccgtaaacaccctt 41203261  T
Q  400 ttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatatt 499  Q
    ||| |||          ||||| |||||||||| ||||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||| ||||||||||    
T  41203260 tttaaag--agaaaaacagttcagattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatatt 41203163  T
Q  500 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    ||||||||||||| | |||||| | |||||||||||| |||| |||||||||| |||||| |||||||||||| |||||||||||||||||  |||||||    
T  41203162 aatcttcctaactttcatccttctgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaacttc 41203063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 312 - 590
Target Start/End: Original strand, 36874977 - 36875253
Alignment:
Q  312 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccca-aacacccttttttaaggtnn 410  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||| |  |||||| ||||| |||||      
T  36874977 cggattttgtaatccggaaacttcaaaaaataggacgcgttacatgatgtttccggattacataatccggaaaccctctgaacaccatttttcaaggtaa 36875076  T
Q  411 nnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 510  Q
          ||| ||||||||||||||| || ||||| |||| |||| |||||||  ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  36875077 aac---agtccggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaa 36875173  T
Q  511 ctcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||| |||||| | |||||||||||| ||||  |||||||| |||||||||| ||||| | |||||| |||| |||||||    
T  36875174 ctctcatccttctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttcagactacttaatcgaattgctc 36875253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 245 - 590
Target Start/End: Original strand, 34517026 - 34517369
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    ||||||||||| |||| | || ||||||||| |||| || |||||||||  |||||||| |||||| ||||||||||||||   |||  |||||||||||    
T  34517026 cggatttcatattccgaactggtgttttcctttgttatacggtgaaaaaatgagttacgaattttttcggattttgtaatcgaaaaatctcaaaaaatag 34517125  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgta 443  Q
    ||||||||||||||| ||||  ||||||||||||| || |||||  ||||||| ||||| ||||         |||| ||||||||||||||||| ||||    
T  34517126 ggcgcgttacatgatttttcg-gattacataatccaaataccccttaaacaccatttttcaagggaaaaac--agtttggattatataatccgaactgta 34517222  T
Q  444 tcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 543  Q
    ||||||||||| |||||||| |  |||||||| |||| ||||||| | |||||||||||| || ||||| | |||||||| |||||||||||| |||| |    
T  34517223 tcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatattaatcatcataactttcatccttttgttttgggtcattgttacct 34517322  T
Q  544 gttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||||||| || |||||||  ||||||||||||||||||    
T  34517323 gttcttagtcaaaaattgggttttcggaatacttgatcggattgctc 34517369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 423 - 599
Target Start/End: Complemental strand, 19110068 - 19109892
Alignment:
Q  423 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 522  Q
    ||||||||||||| || | |||||||||||||  |||| || ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||||||    
T  19110068 gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactctcatccttt 19109969  T
Q  523 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    |||||||||||||| |||  ||||||||||||||||||   |||| || |||||||||||||||||||  |||||||    
T  19109968 tattttgggtcattgttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctccgaaacttc 19109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 418 - 587
Target Start/End: Complemental strand, 16750485 - 16750318
Alignment:
Q  418 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 517  Q
    |||||||||||||||| |||| |||||||||| |||| ||||  || ||||||| ||| |||| ||||||||| ||||||||||||||| ||||||| ||    
T  16750485 gttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatcttc-taactctcat 16750388  T
Q  518 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattg 587  Q
    |||| | |||||||||||| |||  |||||||||| ||||||||||||||||| ||||||||||||||||    
T  16750387 ccttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattg 16750318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 417 - 580
Target Start/End: Original strand, 8388746 - 8388909
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||| || ||||||||||| || ||||| ||| ||||||||||||||||||||||||| |    
T  8388746 agttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaactctca 8388845  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 580  Q
    |||||   |||||||||||| ||   ||||||||||| |||||||| |||||| ||||||||||    
T  8388846 tccttcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgat 8388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 424 - 590
Target Start/End: Original strand, 35251032 - 35251198
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    |||||||||||| || ||||| ||||||||| || |   | ||||||| ||| ||||||| |||| |||| |||||||||||| |||||| ||||||| |    
T  35251032 attatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaaggaccatattaatcttcttaactcctatccttct 35251131  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    ||||| ||||||| ||| |||||||||||| |||||| | |||||||||||||||||| ||||||||    
T  35251132 attttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctc 35251198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 4268406 - 4268303
Alignment:
Q  306 tttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc-caaacaccctttttta 404  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||| |    
T  4268406 ttttttcggattttgtaatccaaaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttca 4268307  T
Q  405 aggt 408  Q
    ||||    
T  4268306 aggt 4268303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 600
Target Start/End: Original strand, 30763804 - 30763927
Alignment:
Q  477 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 576  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| || | |||| ||||||| |||  |||||||||||||||||| |||||| |||| |||    
T  30763804 atagtcattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttgggcaact 30763903  T
Q  577 tgatcggattgctctaaaacttcc 600  Q
    ||||||||||||||  ||||||||    
T  30763904 tgatcggattgctccgaaacttcc 30763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 425 - 602
Target Start/End: Original strand, 42478846 - 42479023
Alignment:
Q  425 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 524  Q
    |||||||||| ||| |||||||||||||||  | |   ||||||||| ||  ||| ||| |||| |||| |||||||||||||||||||| |||||| |     
T  42478846 ttatataatctgaaatgtatcagcacaaattttgagtttatttgtaatatagataaccagtttaaggaccatattaatcttcctaactctcatccttatg 42478945  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||| ||||||| |||   ||||| ||||||||||    |||||||||||||||||| ||||||||| ||||||||||    
T  42478946 ttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaaacttcccc 42479023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 602
Target Start/End: Complemental strand, 38308840 - 38308706
Alignment:
Q  469 taacatgtatagccattttagggacaatattaatcttccta--actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 566  Q
    ||||||| || | ||||||| ||||||||||||||||| ||  ||| | |||||| | ||||||||| || |||| ||||||||||||||||||||  ||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatt 38308742  T
Q  567 tcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||||| ||||||||| ||||||||||    
T  38308741 tcgggctacttgatcagattgctctgaaacttcccc 38308706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 241 - 403
Target Start/End: Complemental strand, 9847658 - 9847495
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||| |||||| ||||||   |||| || ||||  || ||||||||  ||||||| ||||||||| |||||||||||||| |||  |||||||    
T  9847658 tttccggattttataatctggaatggcatttttctttgttaaagagtgaaaaaatgagttactgatttttccagattttgtaatccgaaaatctcaaaaa 9847559  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaacc-cccaaacaccctttttt 403  Q
    || |||||||||||||||| ||| |  ||||||||||||||| |||  ||||||||| ||||||    
T  9847558 attgggcgcgttacatgattttttcgtattacataatccgaacaccatccaaacaccttttttt 9847495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 227 - 382
Target Start/End: Original strand, 25715270 - 25715427
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacgga--tttttccggattttgtaat 324  Q
    ||||||||| ||  ||||||||||| ||||||||||||| ||||||||| ||||  |||||||||||  |||||||  |  ||||| |||| ||||||||    
T  25715270 aaatgcccttgaagtttccggattttataatccggaatggtgttttcctttgttaaagggtgaaaaaatgagttacaaattttttttcggactttgtaat 25715369  T
Q  325 ccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 382  Q
    ||  |||  |||||| |||||||||||||| |||| ||| | ||||||||||||||||    
T  25715370 ccaaaaatctcaaaagatagggcgcgttacctgattttttcggattacataatccgaa 25715427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 424 - 598
Target Start/End: Original strand, 45293743 - 45293916
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||| ||| ||||||||||||||| || | | || || ||||||| ||| ||  |||| ||   |||||||||||||||||||| ||| || |    
T  45293743 attatataatctgaactgtatcagcacaaattctgatc-taattataacatggataaccggtttaagggtcatattaatcttcctaactctcatctttct 45293841  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
     |||| |||||||  || ||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||    
T  45293842 gttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaaactt 45293916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 312 - 389
Target Start/End: Original strand, 33366920 - 33366996
Alignment:
Q  312 cggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc 389  Q
    |||||||||||||||| |||||||||||| || | ||||||||||||| ||||| |||||||||||||||||||||||    
T  33366920 cggattttgtaatccgaaaacttcaaaaa-taagacgcgttacatgatatttccggattacataatccgaaaaccccc 33366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 586
Target Start/End: Original strand, 26228160 - 26228330
Alignment:
Q  416 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 515  Q
    |||||||| ||||||||| |||| |||||||||| | ||  | ||  | ||||| ||||| ||| | | ||||  ||| ||||||||||| ||||||||     
T  26228160 tagttcgggttatataattcgaactgtatcagcatacattatgaatctgtttgtgacatggataactagtttaatgaccatattaatcttgctaactctc 26228259  T
Q  516 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
    |||||||| |||| ||| ||| ||| |||||||||||||||||||   |||||| ||||||||||| ||||    
T  26228260 atccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagatt 26228330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 465 - 591
Target Start/End: Complemental strand, 37773827 - 37773700
Alignment:
Q  465 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc--gg 562  Q
    ||||||||||| ||||||| |||| |||| || |||||||| |||||||| |||||| | |||| | ||||| ||| |||||||||||||||| ||  |     
T  37773827 tttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaagtccagt 37773728  T
Q  563 attttcgggctacttgatcggattgctct 591  Q
    ||||| ||||||||||||| |||||||||    
T  37773727 atttt-gggctacttgatcagattgctct 37773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 313 - 506
Target Start/End: Complemental strand, 38066834 - 38066643
Alignment:
Q  313 ggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggtnnnn 412  Q
    ||||||| ||||||| |||||||||||||||||| | |||| ||||| ||| | |||||||||| || || ||||  |||||||| |||| ||||         
T  38066834 ggattttataatccgaaaacttcaaaaaatagggtgtgttatatgattttttcggattacataacccaaacacccataaacaccccttttcaagggaaaa 38066735  T
Q  413 nnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 506  Q
        |||||  ||||||||| |||||  |||| | ||||||| ||||| || ||||||| ||| |||| ||||||| |||||||||||||||||    
T  38066734 ac--agttcatattatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatcttc 38066643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 459 - 521
Target Start/End: Complemental strand, 17766846 - 17766784
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||||| ||||||    
T  17766846 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatcctt 17766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 314 - 388
Target Start/End: Complemental strand, 38308954 - 38308880
Alignment:
Q  314 gattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 388  Q
    |||| ||||||||| |||||||||||||||||||||| ||  |||| ||||| ||||| |||||||||| |||||    
T  38308954 gattatgtaatccgaaaacttcaaaaaatagggcgcgctatttgatttttccggattatataatccgaacacccc 38308880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 598
Target Start/End: Complemental strand, 13704763 - 13704690
Alignment:
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||| ||| ||| ||| ||||| | ||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  13704763 ttttaggttattgttagttgttttcagtcaaaaatccgattttcgggctacttgatcagattgctctgaaactt 13704690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 510
Target Start/End: Complemental strand, 9847440 - 9847386
Alignment:
Q  456 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 510  Q
    ||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||    
T  9847440 ctaaacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaa 9847386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 521
Target Start/End: Complemental strand, 34519554 - 34519492
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||| | ||||||    
T  34519554 aacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatcctt 34519492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 590
Target Start/End: Original strand, 27670723 - 27670764
Alignment:
Q  549 tagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  27670723 tagtcaaaaatcgggttttcggactacttgatcggattgctc 27670764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 525 - 590
Target Start/End: Complemental strand, 38065528 - 38065463
Alignment:
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||| ||| |||| |||||||||| ||||||  ||||||| ||||| |||||||||||||||    
T  38065528 ttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctc 38065463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 521
Target Start/End: Complemental strand, 9847229 - 9847167
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||| ||||| | ||||||    
T  9847229 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatcctt 9847167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 23406717 - 23407077
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    |||||||||||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||  |||||||| |||| |||||||||||||||||||||    
T  23406717 tttccggatttcgtaatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgagtttttccgaatttcgtaatccggaaacttcaaaaa 23406816  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
    |||||||||||||  |||||||||  |||||||||||||| |||||||| ||||||| ||||| |||||        |||||| |||||||||||||||     
T  23406817 atagggcgcgttagttgatgtttctggattacataatccggaaaccccctaaacaccatttttcaaggtaaaac---agttcgaattatataatccgaac 23406913  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattct 538  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    |||||||||||| |    
T  23406914 tgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttccgtttttgggtcattat 23407013  T
Q  539 tacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||||||||||||   |||||||||||||||||  ||||||||  ||||||||||    
T  23407014 tacttgttcttagtcaaaaatcaagttttcgggctacttgatttgattgctccgaaacttcccc 23407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 242 - 602
Target Start/End: Complemental strand, 2813463 - 2813103
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggat--tttgtaatccggaaacttcaaaa 339  Q
    |||||||||||||||| ||||||| ||||||||| | || ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||    
T  2813463 ttccggatttcataattcggaatggtgttttcctttattatagggtgaaaaatggagttacagatttttccggatattttgtaatccggaaacttcaaaa 2813364  T
Q  340 aatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaa 438  Q
    |||| || | |||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||         ||||||| |||||||||||||    
T  2813363 aataaggtgtgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaacg---gttcgga-tatataatccgaa 2813268  T
Q  439 gtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattc 537  Q
     ||||||| ||||||| |||||||||||| ||||||| |||| ||||||| ||| ||||||||||||||||||||| ||||||    ||||||||||||     
T  2813267 ctgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcatccttccgtttttgggtcattg 2813168  T
Q  538 ttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  2813167 ttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 2813103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 241 - 602
Target Start/End: Original strand, 5699479 - 5699846
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||| |||||    
T  5699479 tttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgggttttttcgaattttgtaatccggaaacttgaaaaa 5699578  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnnt----agttcggattatataatcc 435  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||       |    | ||| |||||||||||||    
T  5699579 atagggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaatacagttcagatttcagattatataatcc 5699678  T
Q  436 gaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtca 534  Q
    ||| ||||| | ||||||| ||||| || ||||||||||| |||| ||||||| ||||||||||||||||| ||||||| |||||| |  ||||||||||    
T  5699679 gaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatccttctgtttttgggtca 5699778  T
Q  535 ttcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    || |||| | ||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||    
T  5699779 ttgttacctattcttagtcaaaaatcgggatttcggactacttgatcggattgctccgaaacttcccc 5699846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 256 - 602
Target Start/End: Original strand, 17264346 - 17264690
Alignment:
Q  256 atccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttaca 355  Q
    |||| ||||||||||||| | ||||  |||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17264346 atcctgaatgatgttttcttttgttacagggtgaaaaaatgagtaacggatttttccggattttgtaatctggaaacttcaaaaaatagggcgcgttaca 17264445  T
Q  356 tgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaat 454  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||| |||||       ||||||||||||||||||| ||| |||||||||||||||    
T  17264446 tgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggt---aaaatagttcggattatataatctgaactgtatcagcacaaat 17264542  T
Q  455 cctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtca 554  Q
     |||||||| |||| ||||||  ||| |||||||||||||||||| |||||||||||||| |||||| | ||||| |||||| |||| |||||||||| |    
T  17264543 tctaaacatgtttgcaacatggttagtcattttagggacaatatttatcttcctaactctcatccttctgttttgcgtcattgttacctgttcttagtta 17264642  T
Q  555 aaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||| |  |||| |||||||||||| |||||||||  ||||||||||    
T  17264643 aaaattgagtttttgggctacttgatgggattgctccgaaacttcccc 17264690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 241 - 600
Target Start/End: Complemental strand, 4508540 - 4508183
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||| ||||||| ||||| ||||||| | ||||  |||||||||||  |||| ||||||||||||||||||| |||||| |||| ||||||||    
T  4508540 tttccggattttataatccagaatggtgttttcttttgttagagggtgaaaaaatgagtaacggatttttccggattttataatccagaaatttcaaaaa 4508441  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaag 439  Q
     ||||||| |||||||||||||||| ||||| |||||||| ||| |||| ||||| | ||||| |||||        |||||||||||||||||| |||     
T  4508440 ttagggcgtgttacatgatgtttccggattatataatccggaaatcccctaaacaacttttttcaaggtaaaac---agttcggattatataatctgaac 4508344  T
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    ||||||||||||||| |||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||| | |||||| | |||||||||||| ||    
T  4508343 tgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactttcatccttctgttttgggtcattgtt 4508244  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    || |||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||    
T  4508243 acatgttcttagtcaaaaatcgggttttcgggctacttgattggattgctccgaaacttcc 4508183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 227 - 598
Target Start/End: Original strand, 5638786 - 5639138
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||||||||||           
T  5638786 aaatgcccttgaggtttccggatttcataatccggaatggtgttttcctctgttatagggtgaaaaatagagttacggatttttccggatttt------- 5638878  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
              ||||||||||||||||||||||||||||| |||||||||||  |||||  ||| ||||||||||||| |||||        |||||||||    
T  5638879 ----------aaaaatagggcgcgttacatgatgtttccggattacataatttgaaaaatccctaaacaccctttttcaaggtaaaac---agttcggat 5638965  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 525  Q
    ||||||||||||| |||||||||||| ||| ||||||| | |||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| |    
T  5638966 tatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactcttatccttttgt 5639065  T
Q  526 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    |||| |||||| |||| |||||||| ||||||||||| ||| ||||||||||| || ||||||||| ||||||    
T  5639066 tttgagtcattgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctctgaaactt 5639138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 242 - 589
Target Start/End: Complemental strand, 14587797 - 14587452
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  |||||| |||||  | ||||| | ||||  |||||||||||  |||| | ||||||||||||||||||||||||| |||||| ||||||    
T  14587797 ttccggattatataatctggaattgtattttcttttgttaaagggtgaaaaaatgagtaagggatttttccggattttgtaatccgaaaactttaaaaaa 14587698  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||| ||||||| ||||| |||||        ||||||||||||||||||  || |    
T  14587697 tagggcgcgttacatgatgtttcctgattacataatccataaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatcataact 14587601  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    ||||| |||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||    
T  14587600 gtatcggcacaaattctaaacatgtttgtaacatggatagtcattttacggacaatattaatcttcctaactctaatccttatgttttgggtcattgtta 14587501  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 589  Q
    | |||||||||| |||||  ||||||| |||||||||||| ||||||||    
T  14587500 catgttcttagtaaaaaaatggatttttgggctacttgattggattgct 14587452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 245 - 480
Target Start/End: Original strand, 32035038 - 32035266
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 344  Q
    |||||||||||||| |||||||||||||| | |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32035038 cggatttcataatctggaatgatgttttcttttgttatatgatgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatag 32035137  T
Q  345 ggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgta 443  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||       |||||||||||||||||||     ||||    
T  32035138 ggcgcgttacatgatgtttccggattacataatccggaaaccccctaaacacccttttttaaggt---aaaatagttcggattatataatc-----tgta 32035229  T
Q  444 tcagcacaaatcctaaacatatttgtaacatgtatag 480  Q
    |||||||||||||||||||||||||||||||||||||    
T  32035230 tcagcacaaatcctaaacatatttgtaacatgtatag 32035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 227 - 590
Target Start/End: Complemental strand, 3717534 - 3717173
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatcc 326  Q
    ||||||||| ||| ||||||||||| ||||||  ||||| ||||||| | ||||  |||||||||||  |||| | ||  ||||||| ||||||||||||    
T  3717534 aaatgcccttgag-tttccggattttataatcttgaatggtgttttcttttgttaaagggtgaaaaaatgagtaatgggcttttccgaattttgtaatcc 3717436  T
Q  327 ggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggat 425  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| |||||| | ||||| || ||||||  ||||| |||||        |||||||||    
T  3717435 ggaaacttcaaaaattagggcgcgttacatgatgtttccggattatataatctggaaacctcctaaacacaatttttcaaggtaaaac---agttcggat 3717339  T
Q  426 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-tta 524  Q
    ||||||||||||| ||||||| ||||||| |||||||| | ||||||||| |||| ||||||||||||||||||||| || |||||||| |||||| |      
T  3717338 tatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaactctcatccttctgt 3717239  T
Q  525 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    |||||||||||| |||| |||||||||||||||||||| ||||| | |||||||||||||||||||    
T  3717238 ttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctc 3717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 283 - 588
Target Start/End: Complemental strand, 1945725 - 1945423
Alignment:
Q  283 agggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaa 382  Q
    |||||||||||  |||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| |  ||||| ||||| |||||| |||    
T  1945725 agggtgaaaaaatgagttacggatttttccggattttgtaatccgaaaacttcaaaaactagggtgcgttacataaattttccggattatataatctgaa 1945626  T
Q  383 aacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagcc 482  Q
     ||||| |||| || ||||| |||          | ||| |||||||||||||||| |||||| |||||||| |||||||| ||||||||||| |||| |    
T  1945625 cacccctaaaccccatttttcaag---tgaaaacaattcagattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtc 1945529  T
Q  483 attttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcg 582  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||||||| |||| |||| |||| ||| |||||||||||||||||||| || |||||||    
T  1945528 attttagggataatattaatcttcctaactctcatccttctgttttgggacattgttacctgtttttattcaaaaatcggattttcgggttatttgatcg 1945429  T
Q  583 gattgc 588  Q
    ||||||    
T  1945428 gattgc 1945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 245 - 581
Target Start/End: Complemental strand, 24604597 - 24604261
Alignment:
Q  245 cggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatg-gagttacggatttttccggattttgtaatccggaaacttcaaaaaata 343  Q
    ||||||||||| |||| | || ||||||||| |||  ||||||||||||   |||||| ||||||||||| ||||||||||||  |||||||||||||||    
T  24604597 cggatttcatattccgaactggtgttttcctttgtcatagggtgaaaaaaatgagttaaggatttttccgaattttgtaatccaaaaacttcaaaaaata 24604498  T
Q  344 gggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgt 442  Q
    |||||  ||||||||| | | | |||||||||||||||| |||||  ||||||| ||||| ||||         |||||  ||||||||||| ||| | |    
T  24604497 gggcgtcttacatgatttcttcggattacataatccgaacaccccttaaacaccatttttcaagggaaaaac--agttcatattatataatctgaactct 24604400  T
Q  443 atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttact 542  Q
    |||||||||||| ||||||||||||||||||   |||| |||||||| |||||||||||||||||||||| | |||||| | ||||| |||||| ||||     
T  24604399 atcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatattaatcttcctaactttcatccttctgttttgagtcattgttacc 24604300  T
Q  543 tgttcttagtcaaaaatcggattttcgggctacttgatc 581  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  24604299 tgttcttagtcaaaaatcgggtttttgggctacttgatc 24604261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 33413584 - 33413417
Alignment:
Q  241 tttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaa 340  Q
    ||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| |||    
T  33413584 tttccggatttcataatccggaatggtgttttcctttgttatagggtgaaaaatggagttacgaatttttctgaattttgtaatccggaaacttca-aaa 33413486  T
Q  341 atagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggt 408  Q
    ||||||||||||||||||||||||| |||||||||||| | |||||||| ||||| ||||||| |||||    
T  33413485 atagggcgcgttacatgatgtttccagattacataatctggaaaccccctaaacaacctttttcaaggt 33413417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 242 - 408
Target Start/End: Original strand, 7412750 - 7412916
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||  |||||| |||||||||||||| | ||||  |||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||    
T  7412750 ttccggattatataatctggaatgatgttttcttttgttaaagggtgaaaaaatgagtaacgggtttttccggattttgtaatccggaaacttcaaaaaa 7412849  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaacccccaaacacccttttttaaggt 408  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||    
T  7412850 tagggcgtgttacatgatgtttccggattacataatccgaaaacccctaaacaccctttttcaaggt 7412916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 302 - 599
Target Start/End: Original strand, 9905100 - 9905392
Alignment:
Q  302 cggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttt 400  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||| ||| |||| ||||| |||||||||||||||| |||||| |||| || |      
T  9905100 cggatttttccggattttgtaattcggaaatttcaaaaaatagggcgcgctacgtgatttttccggattacataatccgaacaccccctaaacgccatca 9905199  T
Q  401 tttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatatt 499  Q
    || ||||        ||||| ||||||||||| ||      |||||||||||||  ||||||| ||||||||||| |||  ||||||||||| |||||||    
T  9905200 ttcaagg--gaaaaatagtttggattatataaccca-----tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatatt 9905292  T
Q  500 aatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    ||| ||||| |||||||||||| | ||||| |||||| ||||   |||||||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  9905293 aattttccttactcttatccttctgttttgagtcattgttaccaattcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttc 9905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 367 - 590
Target Start/End: Original strand, 2539498 - 2539719
Alignment:
Q  367 gattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 465  Q
    |||||||||||| | |||||||| ||||||||||||| |||||        |||||||||||||||||||||| | |||| |||||||| || ||||| |    
T  2539498 gattacataatctggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactctatccgcacaaattctgaacatgt 2539594  T
Q  466 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 565  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| | ||| |||| ||||| ||  ||    
T  2539595 ttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctattcgtagttaaaaaccgagtt 2539694  T
Q  566 ttcgggctacttgatcggattgctc 590  Q
    ||||| |||||||||||||||||||    
T  2539695 ttcggactacttgatcggattgctc 2539719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 455 - 602
Target Start/End: Complemental strand, 21515057 - 21514910
Alignment:
Q  455 cctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtca 554  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |  ||||||||||| |||| ||||||||||||    
T  21515057 cctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtca 21514958  T
Q  555 aaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||    
T  21514957 aaaatcggattttcggactacttgatcggattgctccgaaacttcccc 21514910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 417 - 600
Target Start/End: Original strand, 29519374 - 29519557
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||| | |    
T  29519374 agttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatca 29519473  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    ||||| |||||||||||||| |||| ||||||| |||||||||||| |||||| |||||||||||  |||||||  ||||||||    
T  29519474 tccttctattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcc 29519557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 417 - 590
Target Start/End: Complemental strand, 13801091 - 13800918
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||||||||| |||||| ||| ||||| |||| |||| |||||||| ||||||||||  ||   ||||||| | ||||||||||||||||||||||| |    
T  13801091 agttcggattacataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctca 13800992  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
    || || | |||||||||||| ||| |||||||||||||||||||||||||| |  |||||||||||||||||||    
T  13800991 tcattatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctc 13800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 417 - 586
Target Start/End: Complemental strand, 7734390 - 7734221
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    ||||| ||||||||||| |||| |||||||  |||||| |||||||| ||||||||| | || | ||||||| ||||||||||||||||||||||| | |    
T  7734390 agttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaactatca 7734291  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
    ||||||| |||||| ||||| |||  |||||||  ||||||||| | |||||||||||||||||| ||||    
T  7734290 tccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 477 - 578
Target Start/End: Original strand, 32044537 - 32044638
Alignment:
Q  477 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 576  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||| | |||||||||||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttcgggctact 32044636  T
Q  577 tg 578  Q
    ||    
T  32044637 tg 32044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 440 - 600
Target Start/End: Original strand, 34528558 - 34528718
Alignment:
Q  440 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 539  Q
    |||||||||||||||  | ||||| ||||||||||| |||  ||||| | ||| |||||||||||| |||||||| || ||| | |||||||||||| ||    
T  34528558 tgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcattatt 34528657  T
Q  540 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    |  |||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||    
T  34528658 agctgttcttagtcaaaaatctggttttcggtctacttgatcggattgctccaaaacttcc 34528718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 419 - 602
Target Start/End: Complemental strand, 29289687 - 29289504
Alignment:
Q  419 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 518  Q
    |||||||||||||||| ||| |||||||||||||||  | ||||| ||||||||||  |||   |||||| ||||||||||||| ||||||||||  |||    
T  29289687 ttcggattatataatctgaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatc 29289588  T
Q  519 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||| | |||| ||||||| |||  |||||||||||||||||| | |||||| |||||||||||  |||||||  ||||||||||    
T  29289587 cttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctccgaaacttcccc 29289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 424 - 599
Target Start/End: Complemental strand, 6704183 - 6704009
Alignment:
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||||||| ||| | ||||||||| | |||  ||||||||||||| ||| | | |||| ||||||||||||||||||||||||| ||| ||      
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatcattcg 6704084  T
Q  524 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 599  Q
    ||||| ||||||| |||  ||||  | |||||||||| | ||||||| ||| |||||| ||||||||| |||||||    
T  6704083 attttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcagattgctctgaaacttc 6704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 417 - 601
Target Start/End: Complemental strand, 14038026 - 14037845
Alignment:
Q  417 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 516  Q
    |||||||||||||||| ||||| ||||||||||||||| || |   | ||||||||||| ||| ||  ||||  ||| |||||||||||| ||||    |    
T  14038026 agttcggattatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatattaatcttcttaacc---a 14037930  T
Q  517 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 601  Q
    ||||| | |||| ||||||| ||| |||||||||||||||||||   |||||| ||||||||||| |||||||| ||||| ||||    
T  14037929 tccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaacatccc 14037845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 427 - 598
Target Start/End: Original strand, 236899 - 237069
Alignment:
Q  427 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 526  Q
    ||||||| |||| | |||||||||||||  | ||||| ||||||||||| | |  ||||||| |||| |||||||||||||||||||| ||| || ||||    
T  236899 atataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctatt 236998  T
Q  527 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    || ||||||| ||| ||||| | |||| |||| |  || ||| || || |||||||||||||||| ||||||    
T  236999 ttaggtcattgttagttgttttcagtcgaaaa-ccaatattcaggttatttgatcggattgctctgaaactt 237069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 463 - 589
Target Start/End: Original strand, 16450355 - 16450481
Alignment:
Q  463 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 562  Q
    ||||||||||||| ||| ||| |||| |||  |||||||||||||||| ||| ||| || | |||| ||||||| |||  |||||||||||||||||  |    
T  16450355 tatttgtaacatggataaccagtttaaggaacatattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttg 16450454  T
Q  563 attttcgggctacttgatcggattgct 589  Q
     |||| ||||||||||||| |||||||    
T  16450455 gtttttgggctacttgatcagattgct 16450481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 602
Target Start/End: Complemental strand, 33413408 - 33413365
Alignment:
Q  559 tcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  33413408 tcggattttcgggctacttgatcggattgctctgaaacttcccc 33413365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 590
Target Start/End: Original strand, 3365808 - 3365933
Alignment:
Q  465 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 564  Q
    ||||||||||| ||| | | |||| |||  |||||||||||||||||| | |||||| | |||| ||||||| ||| ||||||  | ||||||||| | |    
T  3365808 tttgtaacatggataacaagtttaaggaacatattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggt 3365907  T
Q  565 tttcgggctacttgatcggattgctc 590  Q
    |||| || |||||||||  |||||||    
T  3365908 tttcaggttacttgatcatattgctc 3365933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 601
Target Start/End: Complemental strand, 10310427 - 10310311
Alignment:
Q  485 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 584  Q
    |||| |||| |||||||||||||||||| | || ||| |||||| ||| ||| | | ||||||| |||||||||||  |||||  ||||||||| || ||    
T  10310427 tttaaggaccatattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaatttttaggctacttggtcaga 10310328  T
Q  585 ttgctctaaaacttccc 601  Q
    ||| ||  |||||||||    
T  10310327 ttgttccgaaacttccc 10310311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 510
Target Start/End: Original strand, 17501003 - 17501054
Alignment:
Q  459 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 510  Q
    ||||| ||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  17501003 aacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaa 17501054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 330 - 388
Target Start/End: Complemental strand, 21517630 - 21517572
Alignment:
Q  330 aacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaacccc 388  Q
    |||| |||||||||||||| | ||||| |||||||| ||||||||||| || |||||||    
T  21517630 aactccaaaaaatagggcgtgctacataatgtttccggattacataattcggaaacccc 21517572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 543 - 600
Target Start/End: Original strand, 7412971 - 7413028
Alignment:
Q  543 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 600  Q
    ||||||||| |||||||| | ||||||| ||| |||||||||||||||  ||||||||    
T  7412971 tgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttcc 7413028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 181; Significance: 2e-97; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 242 - 598
Target Start/End: Complemental strand, 9734 - 9380
Alignment:
Q  242 ttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaa 341  Q
    |||||||||||||||| ||||||  ||||||||| |||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||    
T  9734 ttccggatttcataattcggaattgtgttttcctttgttatagggtgaaaaatagagttacgggtttttccgaattttgtaatccggaaacttcaaaaaa 9635  T
Q  342 tagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagt 440  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||  |||||||||||| || ||        |||||||||||||||||||||| |    
T  9634 taggacgcgttacatgatgtttccggattacataatccgaaaaccccctgaacaccctttttcaaagtaaaac---agttcggattatataatccgaact 9538  T
Q  441 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 540  Q
    ||||||||| |||| ||| |||| ||||||||||| |||| ||||||| ||||||||||||| ||  ||||| | ||| || | |||||||||||| |||    
T  9537 gtatcagcataaattctatacatgtttgtaacatggatagtcattttatggacaatattaatatttataactttcatcattctgttttgggtcattgtta 9438  T
Q  541 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 598  Q
    | |||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  9437 catgttcttagttaaaaatcggattttcggattacttgatcggattgctctgaaactt 9380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 253 - 602
Target Start/End: Complemental strand, 142188 - 141843
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    ||||| ||||||||||||||| | ||||  |||||||||||||  || || ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  142188 ataattcggaatgatgttttcttttgttaaagggtgaaaaatgt-gtaacagatttttccagattttgtaatccggaaacttcaaaaaatagggcgcgtt 142090  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcaca 451  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||       | |||  |||||||||||||||| ||||||||||||    
T  142089 acatgatgtttccggattacataatccggaaaccccctaaacaccctttttcaaggtaaaa---ttgttgagattatataatccgaactgtatcagcaca 141993  T
Q  452 aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttag 551  Q
    ||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||  |||||| |  ||||||||||| || | |||||||||    
T  141992 aattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttct-gtttgggtcattgttgcatgttcttag 141894  T
Q  552 tcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    ||||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  141893 tcaaaaatcgggttttcagactacttgatcggattgctccgaaacttcccc 141843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 152; Significance: 4e-80; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 227 - 602
Target Start/End: Complemental strand, 3648 - 3273
Alignment:
Q  227 aaatgccctggagatttccggatttcataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttc--cggattttgtaat 324  Q
    ||||||||| ||| |||||| || | ||||||||||||| ||||||| | ||||  |||||||||||  |||| ||| ||||||   || ||||||||||    
T  3648 aaatgcccttgag-tttccgaatcttataatccggaatggtgttttcttttgttaaagggtgaaaaaatgagtaacgaattttttttcgaattttgtaat 3550  T
Q  325 ccggaaacttcaaaaaatagggcgcgttacatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcgg 423  Q
    |  |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  ||||||||||||| |||||        |||||||    
T  3549 ctagaaacttcaaaaaatagggcgcgttacatgatgtttccggattacataatccggaaaccccataaacaccctttttcaaggtaaaac---agttcgg 3453  T
Q  424 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 523  Q
    ||||||||||| ||| |||||| || ||||| |||||||| ||||||||||  |||  ||||||||||||||||||||||||| ||||||| |||||| |    
T  3452 attatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatcttcgtaactctcatccttct 3353  T
Q  524 attttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
     |||||||||||| |||||||||||||||  ||||||| | |||||||||||||||||| ||||||||| ||||||||||    
T  3352 gttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaacttcccc 3273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 457 - 602
Target Start/End: Original strand, 140620 - 140765
Alignment:
Q  457 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaa 556  Q
    ||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaa 140719  T
Q  557 aatcggattttcgggctacttgatcggattgctctaaaacttcccc 602  Q
    |||||| ||||| | |||||||||||||||||||  ||||||||||    
T  140720 aatcgggttttcagactacttgatcggattgctccgaaacttcccc 140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 140541 - 140612
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaat 324  Q
    ||||||||||||||||||||| | ||||  | |||||||||  |||| | ||||||||||||||||||||||    
T  140541 ataatccggaatgatgttttcttttgttaaaaggtgaaaaaatgagtaaaggatttttccggattttgtaat 140612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 253 - 402
Target Start/End: Original strand, 23056 - 23205
Alignment:
Q  253 ataatccggaatgatgttttcctgtgttgtagggtgaaaaatggagttacggatttttccggattttgtaatccggaaacttcaaaaaatagggcgcgtt 352  Q
    |||||||| ||| |||||||| | ||||| ||||||||||||| ||| ||||||||||||| ||||| |||||||||||||||||||||||||| || ||    
T  23056 ataatccgtaattatgttttcttttgttgaagggtgaaaaatg-agtaacggatttttccgaattttataatccggaaacttcaaaaaatagggtgcatt 23154  T
Q  353 acatgatgtttcccgattacataatccgaaaaccccc-aaacacccttttt 402  Q
    ||||||||||||| ||||| |||||||| |||||||| ||||||| |||||    
T  23155 acatgatgtttccggattatataatccggaaaccccctaaacacctttttt 23205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 448 - 521
Target Start/End: Original strand, 23228 - 23301
Alignment:
Q  448 cacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||||| | |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 23301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 423 - 586
Target Start/End: Complemental strand, 60028 - 59865
Alignment:
Q  423 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 522  Q
    |||||||||||  ||| |||| ||||||||||  | ||||| ||||||||||  |||| |||||||  ||||||||||||||||||||||| |      |    
T  60028 gattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactcatggatagt 59929  T
Q  523 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 586  Q
     ||||| ||||||| |||   ||||||||||||||||  |||||||||| ||||||||| ||||    
T  59928 cattttaggtcattgttagccgttcttagtcaaaaatttgattttcgggttacttgatcagatt 59865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 442 - 513
Target Start/End: Original strand, 59480 - 59551
Alignment:
Q  442 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 513  Q
    |||||| ||||||  ||||||| ||||| ||||| |||| ||||||| |||||||||||||||| |||||||    
T  59480 tatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 422 - 590
Target Start/End: Original strand, 4471 - 4639
Alignment:
Q  422 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 521  Q
    ||||||||||||| ||| |||||| ||||||||  | ||| | ||||||| ||  |||| |||||||  ||| |||||||||||| ||||  | ||| ||    
T  4471 ggattatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaaccatcatcatt 4570  T
Q  522 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 590  Q
     | |||  ||||||| ||| |||||| ||||| |||||  | |||| | |||| |||||||||||||||    
T  4571 atgtttgaggtcattgttagttgttcctagtccaaaatacggtttttgagctatttgatcggattgctc 4639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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