View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3146_low_23 (Length: 222)
Name: NF3146_low_23
Description: NF3146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3146_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 34972516 - 34972665
Alignment:
| Q |
18 |
gcaataatgcaattttttattattttaaaaaagttgaaacatgcaaggttgttcatgtaacttcgttcaagttaaatagtattatcattttgtggaaggt |
117 |
Q |
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| T |
34972516 |
gcaataatgcaattttttattattttaaaaaagttgaaacatgcaaggttgttcatgtaacttcgttcaagttaaatagtattatcattttgtggaaggt |
34972615 |
T |
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| Q |
118 |
aggtagatttatctgcagcatatgctttgaatttgactatcactgtatac |
167 |
Q |
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| T |
34972616 |
aagtagatttatctgcagcatatgctttgaatttgactatcactgtatac |
34972665 |
T |
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