View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3148_high_2 (Length: 418)

Name: NF3148_high_2
Description: NF3148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3148_high_2
NF3148_high_2
[»] chr3 (37 HSPs)
chr3 (1-292)||(45302445-45302735)
chr3 (292-389)||(49607413-49607510)
chr3 (293-389)||(53982011-53982107)
chr3 (293-389)||(33644200-33644296)
chr3 (291-389)||(17470403-17470501)
chr3 (286-372)||(36707445-36707531)
chr3 (292-389)||(33118855-33118952)
chr3 (292-389)||(54868899-54868996)
chr3 (298-389)||(52629305-52629396)
chr3 (292-389)||(11095359-11095454)
chr3 (292-389)||(27714895-27714992)
chr3 (293-389)||(8076393-8076489)
chr3 (294-389)||(31456690-31456785)
chr3 (297-387)||(30801739-30801829)
chr3 (293-389)||(26141536-26141632)
chr3 (291-389)||(9562997-9563095)
chr3 (292-375)||(11347940-11348023)
chr3 (298-387)||(26754700-26754789)
chr3 (297-382)||(48587102-48587187)
chr3 (286-387)||(48375712-48375813)
chr3 (293-389)||(14623843-14623939)
chr3 (291-389)||(24699958-24700056)
chr3 (291-389)||(35536624-35536722)
chr3 (293-389)||(51419364-51419460)
chr3 (290-389)||(8956759-8956858)
chr3 (294-389)||(13898059-13898154)
chr3 (292-387)||(11907370-11907465)
chr3 (300-389)||(35093592-35093681)
chr3 (292-361)||(35965806-35965875)
chr3 (293-389)||(20764919-20765015)
chr3 (291-355)||(36331416-36331480)
chr3 (293-361)||(47531865-47531933)
chr3 (293-358)||(45058588-45058652)
chr3 (320-383)||(25413784-25413846)
chr3 (292-387)||(1758462-1758559)
chr3 (296-389)||(25407151-25407245)
chr3 (293-375)||(41080709-41080790)
[»] chr8 (30 HSPs)
chr8 (293-389)||(12831047-12831143)
chr8 (293-389)||(15197333-15197429)
chr8 (293-389)||(40423947-40424043)
chr8 (293-388)||(504126-504221)
chr8 (292-389)||(14547921-14548018)
chr8 (290-389)||(37038476-37038575)
chr8 (292-389)||(10284635-10284732)
chr8 (293-389)||(23122601-23122697)
chr8 (293-389)||(34012300-34012396)
chr8 (294-389)||(5957831-5957926)
chr8 (290-376)||(44507104-44507190)
chr8 (293-389)||(1179944-1180040)
chr8 (293-389)||(15048186-15048281)
chr8 (293-376)||(14055609-14055692)
chr8 (291-389)||(17443823-17443921)
chr8 (312-389)||(8841436-8841513)
chr8 (298-389)||(10621091-10621182)
chr8 (293-358)||(30479509-30479574)
chr8 (292-389)||(42221514-42221611)
chr8 (293-389)||(43414585-43414681)
chr8 (292-358)||(16383376-16383442)
chr8 (292-358)||(34307215-34307281)
chr8 (294-389)||(9122196-9122281)
chr8 (293-361)||(20074966-20075034)
chr8 (290-358)||(32032722-32032789)
chr8 (292-389)||(4854867-4854964)
chr8 (292-356)||(24307628-24307692)
chr8 (292-356)||(24307830-24307894)
chr8 (292-375)||(15258947-15259030)
chr8 (292-358)||(16056436-16056502)
[»] chr7 (39 HSPs)
chr7 (289-389)||(36361917-36362017)
chr7 (288-389)||(36362021-36362122)
chr7 (293-389)||(38267040-38267136)
chr7 (292-389)||(7389388-7389485)
chr7 (293-389)||(35137533-35137629)
chr7 (288-389)||(3434557-3434658)
chr7 (292-389)||(8080387-8080484)
chr7 (293-389)||(4999518-4999614)
chr7 (292-389)||(19436191-19436288)
chr7 (292-389)||(38837216-38837313)
chr7 (292-389)||(40957706-40957803)
chr7 (293-389)||(19329842-19329938)
chr7 (294-389)||(32951497-32951592)
chr7 (296-389)||(3783998-3784091)
chr7 (296-389)||(3694370-3694463)
chr7 (293-387)||(21234401-21234495)
chr7 (292-382)||(38044196-38044286)
chr7 (293-382)||(8238212-8238302)
chr7 (293-387)||(46374808-46374902)
chr7 (293-382)||(39255935-39256023)
chr7 (290-358)||(22343358-22343426)
chr7 (290-382)||(26296641-26296733)
chr7 (293-389)||(40846117-40846213)
chr7 (292-389)||(18207179-18207275)
chr7 (290-358)||(41915738-41915806)
chr7 (292-359)||(10343597-10343664)
chr7 (286-372)||(12310899-12310983)
chr7 (292-375)||(36208172-36208255)
chr7 (322-388)||(16374829-16374895)
chr7 (292-337)||(11044187-11044232)
chr7 (291-367)||(46033827-46033903)
chr7 (298-361)||(35522881-35522944)
chr7 (292-382)||(7727905-7727995)
chr7 (293-358)||(32564461-32564526)
chr7 (292-354)||(35468894-35468956)
chr7 (292-362)||(45223041-45223111)
chr7 (327-372)||(27744330-27744375)
chr7 (288-316)||(8080296-8080324)
chr7 (293-349)||(31735884-31735940)
[»] chr1 (34 HSPs)
chr1 (293-389)||(9474880-9474976)
chr1 (292-389)||(2581914-2582011)
chr1 (293-389)||(48716286-48716382)
chr1 (292-389)||(38632325-38632422)
chr1 (291-389)||(50630456-50630554)
chr1 (293-389)||(3000319-3000415)
chr1 (286-389)||(51898687-51898790)
chr1 (291-389)||(41758803-41758901)
chr1 (292-389)||(38595153-38595250)
chr1 (296-389)||(44548380-44548473)
chr1 (293-389)||(27564739-27564835)
chr1 (293-389)||(47452324-47452420)
chr1 (292-389)||(8346392-8346489)
chr1 (293-389)||(43132-43228)
chr1 (292-389)||(32813246-32813343)
chr1 (294-382)||(11152389-11152476)
chr1 (319-387)||(13414787-13414855)
chr1 (292-363)||(49811557-49811628)
chr1 (292-389)||(23597095-23597192)
chr1 (293-370)||(37649198-37649275)
chr1 (296-372)||(26274435-26274511)
chr1 (298-389)||(44453984-44454075)
chr1 (293-358)||(50591035-50591100)
chr1 (293-389)||(3302537-3302633)
chr1 (292-387)||(45044566-45044661)
chr1 (292-382)||(5959011-5959101)
chr1 (300-361)||(26440741-26440802)
chr1 (324-388)||(44334175-44334239)
chr1 (290-383)||(7740730-7740823)
chr1 (293-358)||(41608528-41608593)
chr1 (298-361)||(34340071-34340133)
chr1 (323-383)||(750243-750302)
chr1 (289-361)||(37926470-37926542)
chr1 (339-387)||(48489346-48489394)
[»] chr2 (31 HSPs)
chr2 (291-389)||(7465739-7465837)
chr2 (291-389)||(32505652-32505750)
chr2 (292-389)||(10249386-10249483)
chr2 (296-389)||(19930824-19930917)
chr2 (293-389)||(13438343-13438439)
chr2 (290-389)||(28863452-28863551)
chr2 (292-389)||(9058479-9058576)
chr2 (292-389)||(33436104-33436201)
chr2 (293-389)||(4060685-4060781)
chr2 (293-389)||(17473020-17473116)
chr2 (293-389)||(27864704-27864800)
chr2 (292-376)||(38882831-38882914)
chr2 (293-389)||(40701478-40701574)
chr2 (291-389)||(5574492-5574590)
chr2 (292-389)||(30915462-30915559)
chr2 (293-389)||(28381659-28381755)
chr2 (292-389)||(20700814-20700911)
chr2 (293-389)||(40613906-40614002)
chr2 (293-387)||(17820010-17820104)
chr2 (291-389)||(2533122-2533219)
chr2 (292-374)||(26891523-26891605)
chr2 (292-389)||(38273146-38273243)
chr2 (293-358)||(43490121-43490186)
chr2 (294-389)||(41575138-41575234)
chr2 (290-361)||(33436208-33436279)
chr2 (293-382)||(38732354-38732443)
chr2 (292-389)||(42257192-42257289)
chr2 (291-382)||(36168834-36168925)
chr2 (299-387)||(3439985-3440073)
chr2 (311-358)||(2997522-2997569)
chr2 (292-358)||(45097770-45097836)
[»] chr4 (38 HSPs)
chr4 (292-389)||(480451-480548)
chr4 (292-389)||(29239885-29239982)
chr4 (293-389)||(41236347-41236443)
chr4 (292-389)||(48183053-48183150)
chr4 (292-389)||(50052432-50052529)
chr4 (293-389)||(11511466-11511562)
chr4 (293-389)||(54473537-54473633)
chr4 (291-389)||(29234249-29234347)
chr4 (293-389)||(3481654-3481750)
chr4 (293-389)||(6034044-6034140)
chr4 (292-389)||(23608234-23608331)
chr4 (292-389)||(42044371-42044468)
chr4 (293-389)||(31910192-31910288)
chr4 (292-387)||(24995113-24995208)
chr4 (293-372)||(50526192-50526271)
chr4 (289-389)||(28480272-28480372)
chr4 (289-389)||(28481147-28481247)
chr4 (289-389)||(28482022-28482122)
chr4 (292-389)||(29977884-29977981)
chr4 (293-360)||(40574779-40574846)
chr4 (291-358)||(47986206-47986273)
chr4 (292-358)||(55475190-55475256)
chr4 (293-358)||(18924530-18924595)
chr4 (293-389)||(29535377-29535472)
chr4 (298-382)||(53352577-53352660)
chr4 (292-358)||(19670751-19670817)
chr4 (292-389)||(47104543-47104640)
chr4 (341-389)||(41823930-41823978)
chr4 (291-379)||(44536760-44536847)
chr4 (290-358)||(50813927-50813995)
chr4 (292-358)||(29547994-29548060)
chr4 (292-358)||(32766957-32767023)
chr4 (293-358)||(55079749-55079814)
chr4 (311-358)||(17983778-17983825)
chr4 (292-387)||(48647732-48647827)
chr4 (293-358)||(8343198-8343263)
chr4 (298-383)||(18769114-18769199)
chr4 (301-382)||(29589751-29589831)
[»] chr5 (33 HSPs)
chr5 (293-389)||(40145407-40145503)
chr5 (296-389)||(18520888-18520981)
chr5 (291-389)||(2740272-2740370)
chr5 (292-389)||(36732946-36733043)
chr5 (292-389)||(13811651-13811748)
chr5 (293-389)||(14831814-14831910)
chr5 (293-389)||(28177775-28177871)
chr5 (293-389)||(33149642-33149738)
chr5 (293-389)||(35785199-35785295)
chr5 (293-389)||(42414306-42414402)
chr5 (293-389)||(35943896-35943992)
chr5 (292-389)||(15409614-15409711)
chr5 (291-387)||(6679696-6679792)
chr5 (291-382)||(41470427-41470518)
chr5 (292-389)||(31008987-31009084)
chr5 (294-352)||(36875644-36875702)
chr5 (292-358)||(3921300-3921366)
chr5 (289-358)||(2252203-2252272)
chr5 (293-389)||(6260005-6260101)
chr5 (293-389)||(26720516-26720612)
chr5 (293-389)||(26990265-26990361)
chr5 (292-389)||(9603812-9603909)
chr5 (292-389)||(38296202-38296299)
chr5 (338-382)||(31132389-31132433)
chr5 (293-389)||(20073520-20073616)
chr5 (293-361)||(33825356-33825424)
chr5 (292-356)||(39688934-39688998)
chr5 (298-356)||(10356639-10356698)
chr5 (294-389)||(16327902-16327997)
chr5 (341-387)||(21370052-21370098)
chr5 (339-389)||(39557521-39557571)
chr5 (342-387)||(25831334-25831379)
chr5 (323-383)||(22512408-22512467)
[»] chr6 (22 HSPs)
chr6 (293-389)||(32869678-32869774)
chr6 (296-389)||(22880662-22880755)
chr6 (293-389)||(17598554-17598650)
chr6 (293-376)||(31109417-31109500)
chr6 (290-389)||(11427613-11427714)
chr6 (292-389)||(6209469-6209566)
chr6 (296-389)||(23128131-23128224)
chr6 (292-372)||(15832576-15832656)
chr6 (290-389)||(31976245-31976344)
chr6 (293-389)||(29857827-29857923)
chr6 (293-389)||(31953034-31953130)
chr6 (297-389)||(28536492-28536582)
chr6 (294-369)||(946377-946452)
chr6 (292-358)||(15990077-15990143)
chr6 (292-358)||(30341395-30341461)
chr6 (292-389)||(31110765-31110860)
chr6 (293-358)||(15508059-15508124)
chr6 (298-387)||(9379718-9379807)
chr6 (319-383)||(24203921-24203984)
chr6 (293-382)||(4231548-4231637)
chr6 (292-361)||(12732481-12732550)
chr6 (290-327)||(22422084-22422121)
[»] scaffold0321 (1 HSPs)
scaffold0321 (292-374)||(10128-10210)
[»] scaffold1268 (1 HSPs)
scaffold1268 (293-389)||(933-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (293-389)||(933-1029)
[»] scaffold0110 (1 HSPs)
scaffold0110 (293-382)||(8874-8963)
[»] scaffold0237 (1 HSPs)
scaffold0237 (293-389)||(4029-4125)
[»] scaffold0018 (1 HSPs)
scaffold0018 (309-389)||(152514-152594)
[»] scaffold0316 (1 HSPs)
scaffold0316 (339-387)||(17100-17148)


Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 45302735 - 45302445
Alignment:
Q  1 tccgctcaaaatattgggtttgcggtgtgaatgaatatatagtttgcatgggaaacattatagtactgatcacgtttcgcgaatctatttgatgaaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45302735 tccgctcaaaatattgggtttgcggtgtgaatgaatatatagtttgcatgggaaacattatagtactgatcacgttttgcgaatctatttgatgaaatgg 45302636  T
Q  101 tccctccctgtgacaaaaaagctagctgggcaaaattgtcctcaacttaatgaaactcttcttaatgaaaaaccatacacatgcttttcgtacaattaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45302635 tccctccctgtgacaaaaaagctagctgggcaaaattgtcctcaacttaatgaaactcttcttaatgaaaaaccatacacatgcttttcgtacaattaat 45302536  T
Q  201 tgccccagctccttgttcgtttatgaagcttcatttaaaatagctcggaatttagtttgaatattagtnnnnnnntaataatcacaaatata 292  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||       |||||||||||||||||    
T  45302535 tgccccagctccttgttcgtttatgaagcttca-ttaaaatagctcggaatttagtttgaatataagtaaaaaaataataatcacaaatata 45302445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 49607413 - 49607510
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  49607413 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacact 49607510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 53982011 - 53982107
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 53982107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 33644200 - 33644296
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 33644296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 17470403 - 17470501
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17470403 tagagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacact 17470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 36707531 - 36707445
Alignment:
Q  286 aaatatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtgga 372  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  36707531 aaataaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtgga 36707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 33118952 - 33118855
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| ||| || |||||||||    
T  33118952 agagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacact 33118855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 54868996 - 54868899
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  54868996 agagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 54868899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 52629305 - 52629396
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 52629396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 11095454 - 11095359
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||  ||||| || |||||||||    
T  11095454 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacact 11095359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 27714992 - 27714895
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||| |||||||  |||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  27714992 agagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 27714895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 8076393 - 8076489
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||| ||||||||||||| || |||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 8076489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 31456690 - 31456785
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| |||| | ||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 31456785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 30801829 - 30801739
Alignment:
Q  297 aatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||  |||||||||||||| ||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 26141632 - 26141536
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| | | ||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacact 26141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 9562997 - 9563095
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||||||| ||||| | |||||||||||||||||||||||||| ||  ||||||||||||    
T  9562997 tagagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacact 9563095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 11348023 - 11347940
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccc 375  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||||    
T  11348023 agagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccc 11347940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 26754700 - 26754789
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||| |||||||||||||||||| |||||||||||| || |||||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 382
Target Start/End: Complemental strand, 48587187 - 48587102
Alignment:
Q  297 aatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||||||||||| ||||||||||| ||||||||||||||| | | ||| |||||||||||||||||||||||||| ||| |||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaa 48587102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 48375813 - 48375712
Alignment:
Q  286 aaatatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaaca 385  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||| |  | ||||| |||||||||||||  || ||||| |||||||| ||||| ||    
T  48375813 aaatatagagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagca 48375714  T
Q  386 ca 387  Q
    ||    
T  48375713 ca 48375712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 14623939 - 14623843
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||| ||||||||| |||||||||| |||| | ||||| |||||||||||| ||  ||| ||||||| ||||||| ||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacact 14623843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 24700056 - 24699958
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| |||||| || ||||||||| ||||| | ||||| ||||||||| ||||| | |||||||||||   |||||||||||    
T  24700056 tagagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacact 24699958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 35536624 - 35536722
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| ||||| ||| ||||||||| ||||| | ||||| |||||| |||||||| |||| |||||||  |||||| ||||||    
T  35536624 tagagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacact 35536722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 51419460 - 51419364
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| |||||| |||||||||| ||||| | | ||||||||||||||||||||| | ||| | |||||| ||||| ||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacact 51419364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 8956759 - 8956858
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||| ||||| ||| ||||||| ||||||| | ||||| |||||| ||||||||  ||| |||||||  |||||| ||||||    
T  8956759 atagagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacact 8956858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 13898154 - 13898059
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||| ||| ||| ||||||||| |||||||||| |||| | ||||| |||||||||||||||  ||| ||||||| ||||||| ||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacact 13898059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 387
Target Start/End: Original strand, 11907370 - 11907465
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||| ||||||||||||||||||||||||||||||||| | |  | |  ||||||||||||||||| || ||||  |||||||| ||||| ||||    
T  11907370 agagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 35093592 - 35093681
Alignment:
Q  300 gatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||| | ||||||||||||||| | ||||| |||||| ||||||||||||| || |||| ||| || ||| |||| ||||||    
T  35093592 gatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacact 35093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 361
Target Start/End: Complemental strand, 35965875 - 35965806
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    |||||||||||||||| ||| ||||| |||| |||||| ||||||| | ||||| |||||||||||||||    
T  35965875 agagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 20765015 - 20764919
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||| ||||||||| |||||||||  ||||||| |||| | | ||||||||||||||||||||| | ||| ||||||||  |||| ||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacact 20764919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 36331480 - 36331416
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctg 355  Q
    |||||| |||||||||| |||||||||| || |||| ||||| |||| |||||||||||||||||    
T  36331480 tagagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 47531865 - 47531933
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    |||| |||||||||||||| |||||| || ||||||||| ||| | |||||||||| ||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgt 47531933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 45058652 - 45058588
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| ||||||||||||| |||||||||| |||| | ||||| ||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 320 - 383
Target Start/End: Complemental strand, 25413846 - 25413784
Alignment:
Q  320 tgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaa 383  Q
    |||||||||||||||| | | |||||||||| |||||||||| || || |||||||||||||||    
T  25413846 tgacaatacacccttt-acacccacacaaaactctgacacgtggtaacctggaccccacacaaa 25413784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 1758559 - 1758462
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccct--ttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||| ||||||||||| || || |||||  ||||||||||   |||| | ||||||||||||||||||  | || |||||||| |||||||||||||    
T  1758559 agagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacaca 1758462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 25407245 - 25407151
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaa-tctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||| ||| || |||||| ||||| |||| |||| |  |||||||||| ||||||||||  |||  |||| ||||||||||||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacact 25407151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 375
Target Start/End: Original strand, 41080709 - 41080790
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccc 375  Q
    ||||||||||||||||||| ||||| ||  ||| ||||||||||| | |||| ||||||||||| | || |||| ||||||||    
T  41080709 gagtaatgatacatagacatcctta-gtagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc 41080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 5e-38; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 12831047 - 12831143
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 12831143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 15197333 - 15197429
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 15197429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 40424043 - 40423947
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 40423947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 293 - 388
Target Start/End: Complemental strand, 504221 - 504126
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacac 388  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 504126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 14547921 - 14548018
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||| |||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  14547921 agagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 14548018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 37038476 - 37038575
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  37038476 atagagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 37038575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 10284732 - 10284635
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  10284732 agagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 23122697 - 23122601
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||| | |||||||||||||||||||||||||||||||||||| || || ||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 23122601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 34012396 - 34012300
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||  |||||||||||||| | |||||||||||| ||||||||||||||||||| ||| ||||| ||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 34012300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 5957831 - 5957926
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacact 5957926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 376
Target Start/End: Complemental strand, 44507190 - 44507104
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggacccc 376  Q
    ||||||||||||||||||||||||||||||||  ||||||| |||| | | ||||||||||||||||||||||||||||||||||||    
T  44507190 atagagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggacccc 44507104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 1180040 - 1179944
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||||||||||||| |||||  || ||||| ||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacact 1179944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 15048281 - 15048186
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||| ||| |||||||| ||||| ||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacact 15048186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggacccc 376  Q
    |||| ||||||||| ||||||||||||||||||||||| | |||| |||||||||||||||| ||| |||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 17443823 - 17443921
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||| |||||||||||||| ||||||||||||||||||   || | |  ||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  17443823 tagagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacact 17443921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 389
Target Start/End: Complemental strand, 8841513 - 8841436
Alignment:
Q  312 cccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||| || |||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 8841436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 389
Target Start/End: Complemental strand, 10621182 - 10621091
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||| |||||||||  |||||||||||||| | ||||||||||||||||||||||| ||| | || ||| ||||| ||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacact 10621091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 42221514 - 42221611
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||| ||| |||||||||||||||||  | | || | |||||||||||||||||||||| |||  ||||||||| |||| ||||||    
T  42221514 agagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacact 42221611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 43414681 - 43414585
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| |||||| || ||| ||||||||||| | |||||||||||||| |||||| ||||| |||| ||| ||||| ||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacact 43414585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 16383376 - 16383442
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  16383376 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 16383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 34307215 - 34307281
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  34307215 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 9122196 - 9122281
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||| ||||||||          |||||||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacac----------ccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacact 9122281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||| | ||||| |||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 32032722 - 32032789
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||||| |||||||||| ||||||||||||| ||||||| || |||| ||||||||||||||||||||    
T  32032722 atagagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgaca 32032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 4854964 - 4854867
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| | | | ||| |||||||||| | || | ||| |||||||  ||||| ||||||    
T  4854964 agagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacact 4854867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 356
Target Start/End: Original strand, 24307628 - 24307692
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctga 356  Q
    ||||| |||||||||| ||||||||||||| ||||||| || |||| | ||||||||||||||||    
T  24307628 agagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 24307894 - 24307830
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctga 356  Q
    ||||| |||||||||| ||||||||||||| ||||||| || |||| | ||||||||||||||||    
T  24307894 agagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 375
Target Start/End: Complemental strand, 15259030 - 15258947
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccc 375  Q
    ||||| |||||||||||| || ||||| || ||||||| || | || ||||||| |||||||||||| || |||||||||||||    
T  15259030 agagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccc 15258947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 16056502 - 16056436
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||| ||||| ||||||||||| || |||| | ||||||||||||||||||    
T  16056502 agagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgaca 16056436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 36362017 - 36361917
Alignment:
Q  289 tatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacac 388  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  36362017 tatagagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacac 36361918  T
Q  389 t 389  Q
    |    
T  36361917 t 36361917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 36362021 - 36362122
Alignment:
Q  288 atatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  36362021 atatagagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T
Q  388 ct 389  Q
    ||    
T  36362121 ct 36362122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 38267040 - 38267136
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38267136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 7389388 - 7389485
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  7389388 agagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 7389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 35137533 - 35137629
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacact 35137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 3434557 - 3434658
Alignment:
Q  288 atatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||| ||| ||||| ||||    
T  3434557 atatagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T
Q  388 ct 389  Q
    ||    
T  3434657 ct 3434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 8080484 - 8080387
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | | ||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  8080484 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 8080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 4999614 - 4999518
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||| || ||||||||| ||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacact 4999518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 19436288 - 19436191
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||| || || ||||||    
T  19436288 agagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacact 19436191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 38837216 - 38837313
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||  | | | |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  38837216 agagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 40957706 - 40957803
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| |||  |||| ||||||    
T  40957706 agagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 19329842 - 19329938
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||| | |||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 19329938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 32951592 - 32951497
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||| ||||| |||||||||| ||||| | |||||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 32951497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 3783998 - 3784091
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||| ||||||| | ||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 3784091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 296 - 389
Target Start/End: Original strand, 3694370 - 3694463
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||| ||| ||||||||||||||||||||||| ||| | | |||||||||||||||||||||||||| ||||| ||| ||||| ||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacact 3694463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 293 - 387
Target Start/End: Original strand, 21234401 - 21234495
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |  ||||||||||| |||||||||| ||| || ||||| ||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 382
Target Start/End: Original strand, 38044196 - 38044286
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||||| |||| ||  |||||||| |||||    
T  38044196 agagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaa 38044286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 382
Target Start/End: Original strand, 8238212 - 8238302
Alignment:
Q  293 gagtaatgatacatagacaccct-taggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||| |||||||||| ||||||| |||||| ||||||||||||||| | |||||||||||||||||| |||||||  |||||||| |||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaa 8238302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 387
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||| |||||||||||||| ||||||||| ||| ||||||||| | | ||||||||||||||||||||| | ||| |||||||| ||||| ||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 39256023 - 39255935
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||| |||||||||||||| ||||||||| |||||||||  |||||| ||| ||||||||||||||||| | ||||||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaa 39255935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 22343358 - 22343426
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  22343358 atagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 290 - 382
Target Start/End: Original strand, 26296641 - 26296733
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||||| |||||||||||||| ||||||||||||||| ||||||| | ||||||| |||||||||| |||| | ||  |||||||| |||||    
T  26296641 atagagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaa 26296733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 40846213 - 40846117
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||| ||| ||||||||| |||||||||| |||| |||||||||||||||| ||| ||||| |  |||||||| |||||| |||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacact 40846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 18207179 - 18207275
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||| ||||||||| |||||||||  |||| | ||| |||||||||| |||||| | |||||| ||||||||||| ||||||    
T  18207179 agagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacact 18207275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 41915738 - 41915806
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||||| |||||||||| ||||||||||||| |||||||||| |||| | | ||||||||||||||||    
T  41915738 atagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgaca 41915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 359
Target Start/End: Complemental strand, 10343664 - 10343597
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacac 359  Q
    ||||||||||||||||||||||||||||||  |||||||   |||| | |||||||||||||||||||    
T  10343664 agagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 12310899 - 12310983
Alignment:
Q  286 aaatatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtgga 372  Q
    ||||||||||| ||||||||||||||||||||||||  |||| | |  | |||||||| |||||||||||||| || ||||||||||    
T  12310899 aaatatagagttatgatacatagacacccttaggtggaaatatatc--tggatatccatacaaaaatctgacatgtggtcacgtgga 12310983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 375
Target Start/End: Original strand, 36208172 - 36208255
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccc 375  Q
    ||||| ||||||||||||||||||||||||  ||||||  | |||| | ||||||||||| |||||| || |||||||||||||    
T  36208172 agagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccc 36208255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 16374895 - 16374829
Alignment:
Q  322 acaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacac 388  Q
    |||||||| || |||| ||||||||||||||||||||||| |||||||||| | ||||||| |||||    
T  16374895 acaatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacac 16374829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 11044187 - 11044232
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttga 337  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||    
T  11044187 agagtaatgatacatagacacccttaggtggcaatacatcctttga 11044232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 367
Target Start/End: Complemental strand, 46033903 - 46033827
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcac 367  Q
    |||||| |||||||||||| |  |||||||| ||||||||||||| | | ||||| ||||||||||||||| |||||    
T  46033903 tagagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcac 46033827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 298 - 361
Target Start/End: Original strand, 35522881 - 35522944
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    |||||||||||||| ||||| ||| ||||||||| ||| | | |||||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgt 35522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 382
Target Start/End: Original strand, 7727905 - 7727995
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||| |||||||||| |||||||||||||  ||||||||  |||| || |||| |||||||||||| || ||||  |||||||| |||||    
T  7727905 agagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaa 7727995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| |||  |||||||| |||||||||| |||| | ||||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 354
Target Start/End: Complemental strand, 35468956 - 35468894
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatct 354  Q
    |||||||||||||||||||| |||||| || ||||||| | ||||| | ||||| ||||||||    
T  35468956 agagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 362
Target Start/End: Original strand, 45223041 - 45223111
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgta 362  Q
    |||||||||||| ||| ||| ||||||||| |||||||  |||  | ||| ||||||||||||||||||||    
T  45223041 agagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgta 45223111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 372
Target Start/End: Complemental strand, 27744375 - 27744330
Alignment:
Q  327 acaccctttgatatccacacaaaaatctgacacgtagtcacgtgga 372  Q
    ||||||||||||| |||||||||||||||||| || | ||||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtgga 27744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 316
Target Start/End: Original strand, 8080296 - 8080324
Alignment:
Q  288 atatagagtaatgatacatagacaccctt 316  Q
    |||||||||||||||||||||||||||||    
T  8080296 atatagagtaatgatacatagacaccctt 8080324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 349
Target Start/End: Original strand, 31735884 - 31735940
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaa 349  Q
    |||| |||||||||||||| ||||||||| |||||||| |||| | | |||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 9474976 - 9474880
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacact 9474880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 2581914 - 2582011
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  2581914 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 48716382 - 48716286
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48716286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 38632422 - 38632325
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  38632422 agagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 38632325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 50630456 - 50630554
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||| || |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  50630456 tagagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 50630554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 3000319 - 3000415
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 3000415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 389
Target Start/End: Complemental strand, 51898790 - 51898687
Alignment:
Q  286 aaatatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaaca 385  Q
    |||| ||||||||||||||||||||| | ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||    
T  51898790 aaatttagagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagca 51898691  T
Q  386 cact 389  Q
    ||||    
T  51898690 cact 51898687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 41758803 - 41758901
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||| |||  || ||||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  41758803 tagagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacact 41758901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 38595153 - 38595250
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  38595153 agagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 38595250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 44548473 - 44548380
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||| | ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 44548380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 27564835 - 27564739
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||| | |||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 27564739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 47452420 - 47452324
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||  |||||||||||||| | |||||||||||||| ||||||||||||||||| ||| ||||| ||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacact 47452324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 8346489 - 8346392
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||| |||| ||||||| ||||||||| ||||| | |||||||||||||||||||||||||||||||||||  ||||| ||||||    
T  8346489 agagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacact 8346392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 43132 - 43228
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||  |||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacact 43228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 32813246 - 32813343
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||| | | ||||||||||||||||||||| ||||| |||||||| ||||| ||||||    
T  32813246 agagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 382
Target Start/End: Complemental strand, 11152476 - 11152389
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||||||| ||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||||||||| || |||||| |||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaa 11152389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 13414787 - 13414855
Alignment:
Q  319 gtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  13414787 gtgacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 49811628 - 49811557
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtag 363  Q
    ||||| |||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  49811628 agagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtag 49811557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 23597192 - 23597095
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||| | ||||||| |||||||| |||||||| ||||| ||||||||||||||| | ||||| ||||   ||||||||||||    
T  23597192 agagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacact 23597095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 37649198 - 37649275
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtg 370  Q
    ||||||||||||||||||| | ||||||| |||||||| |||||| | ||||||||||||||||||||| ||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtg 37649275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 26274435 - 26274511
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtgga 372  Q
    |||||||||||||||||||||| ||| ||||||| | ||||| ||||||| ||||||||||||| ||||||||||||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtgga 26274511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 298 - 389
Target Start/End: Original strand, 44453984 - 44454075
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||| ||| ||| ||||||| |  |||||| |||||||||||||||||| || || ||||||| ||||||||| ||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacact 44454075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 50591100 - 50591035
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 50591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 3302633 - 3302537
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||| ||| ||||||||||||||| |  | | || | |||||||||||||||||||||| |||  ||||||||| |||| ||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacact 3302537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 45044661 - 45044566
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||| |||||||||| |   ||||||||| ||||||||| ||||| | ||| |||||||||||||| |||| ||| |||||||| ||||||||||    
T  45044661 agagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 5959101 - 5959011
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||| |||||||||| ||||||||| ||| |||||||||  |||| | |||||||||||||||||| || ||||  |||||||| |||||    
T  5959101 agagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaa 5959011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 26440741 - 26440802
Alignment:
Q  300 gatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    |||| ||||||| |||||| |||||||||||||||| | | |||||||||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgt 26440802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 388
Target Start/End: Complemental strand, 44334239 - 44334175
Alignment:
Q  324 aatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacac 388  Q
    ||||||| | |||| ||||||||||||| ||||||||||||||| |||||||  |||||||||||    
T  44334239 aatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 383
Target Start/End: Original strand, 7740730 - 7740823
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaa 383  Q
    ||||||| ||||||||| |||| ||||| ||||||||||| || |||| | | ||| |||||| |||||||| |  | ||||||||||||||||    
T  7740730 atagagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaaa 7740823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 41608593 - 41608528
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| ||| ||||||||| |||||||||| |||| |  |||||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 41608528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 34340133 - 34340071
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    ||||||||||||||| ||||||||  ||||||||  |||||  |||||||||||||||||||||    
T  34340133 atgatacatagacactcttaggtggtaatacacctgttgat-gccacacaaaaatctgacacgt 34340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 750243 - 750302
Alignment:
Q  323 caatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaa 383  Q
    ||||||||||||| | | |||||||||| |||||||||| || || |||||||||||||||    
T  750243 caatacacccttt-acacccacacaaaattctgacacgtggtaacatggaccccacacaaa 750302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 361
Target Start/End: Complemental strand, 37926542 - 37926470
Alignment:
Q  289 tatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    |||||||| |||||||||||| | | ||||||| ||||||| | ||| | | ||||| |||||||||||||||    
T  37926542 tatagagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgt 37926470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 48489346 - 48489394
Alignment:
Q  339 atccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||||||||||||||||| || |||||||||| ||| ||||| ||||    
T  48489346 atccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 8e-37; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 7465837 - 7465739
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7465837 tagagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacact 7465739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 32505750 - 32505652
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  32505750 tagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 32505652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 10249483 - 10249386
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  10249483 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 10249386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 19930917 - 19930824
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacact 19930824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 13438343 - 13438439
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 13438439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 28863452 - 28863551
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  28863452 atagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 28863551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 9058479 - 9058576
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  9058479 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 9058576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 33436201 - 33436104
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  33436201 agagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 33436104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 4060685 - 4060781
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||| || || ||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacact 4060781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 17473020 - 17473116
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 17473116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 27864704 - 27864800
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| || || ||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacact 27864800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 292 - 376
Target Start/End: Complemental strand, 38882914 - 38882831
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggacccc 376  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38882914 agagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 40701478 - 40701574
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacact 40701574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 5574590 - 5574492
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||| ||| ||||| ||||||    
T  5574590 tagagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacact 5574492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 30915462 - 30915559
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| |||||||||||||||   ||||| ||||||||||||||||||||||||||||||  |||| ||||||    
T  30915462 agagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacact 30915559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 28381755 - 28381659
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||| || || | ||||||||||||||||||||||||||| ||||| || ||||| ||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacact 28381659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 20700814 - 20700911
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||||   | |||||||||||||||||||||||||||||||||| || || ||||||    
T  20700814 agagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 20700911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 40614002 - 40613906
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||| | ||| |||||||| ||||| ||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacact 40613906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 293 - 387
Target Start/End: Complemental strand, 17820104 - 17820010
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||| |||||||||||||| |  |||||| |||||||||| |||| | |||||||||||||||||| || || ||||||||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 2533122 - 2533219
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||| |||||||||||||| ||||| ||| ||||||| ||||||| | ||||||||||||||||||||||| ||| | |||||| ||||| ||||||    
T  2533122 tagagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacact 2533219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 26891605 - 26891523
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggacc 374  Q
    ||||| ||||||||||| |||||||||||| |||||||||| | || | |||||||||||||||||| || ||||||||||||    
T  26891605 agagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacc 26891523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 38273243 - 38273146
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| ||||||||||||||  ||||| || ||||||||||||| | | ||||||||||||||||||||||| ||| |||||||| ||| | ||||||    
T  38273243 agagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacact 38273146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 293 - 358
Target Start/End: Original strand, 43490121 - 43490186
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 41575138 - 41575234
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggacccc-acacaaacacact 389  Q
    |||||||||||||||||| |||||| ||  |||||||||||||| || ||||||||||| ||||| || |||| ||||||||| |||||| ||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacact 41575234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 361
Target Start/End: Original strand, 33436208 - 33436279
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    |||||||||||||||||||||| |||||| || ||||||||| ||||| | ||||| |||||||||||||||    
T  33436208 atagagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgt 33436279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 382
Target Start/End: Original strand, 38732354 - 38732443
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||| |||||||||| ||||||||| ||||||||||| || |||| | |||||||||||||||||| || ||||  |||||||| |||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaa 38732443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 42257192 - 42257289
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||| | ||||||| ||||||| | ||||| | ||||| ||||||||||||||| | ||| |||||||| ||||| ||||||    
T  42257192 agagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacact 42257289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 382
Target Start/End: Original strand, 36168834 - 36168925
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||||| |||||||||||||| |||||| |||||||||| ||||| |   |||||||||||| |||||||| | ||| |||||||| |||||    
T  36168834 tagagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaa 36168925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 3439985 - 3440073
Alignment:
Q  299 tgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||| |||||||||||||||| |||||||| | | || | |||||||||||||| ||| ||  | ||||||||||| ||||| ||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 2997569 - 2997522
Alignment:
Q  311 acccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2997522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 45097836 - 45097770
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||| ||||||||| ||||||| || |||| | ||| ||||||||||||||    
T  45097836 agagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgaca 45097770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 480548 - 480451
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  480548 agagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacact 480451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 29239885 - 29239982
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  29239885 agagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 41236347 - 41236443
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 41236443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 48183150 - 48183053
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  48183150 agagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 48183053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 50052529 - 50052432
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  50052529 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 50052432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 11511562 - 11511466
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 11511466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 54473633 - 54473537
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||||||||||| ||||| ||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacact 54473537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 29234347 - 29234249
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||| ||||||    
T  29234347 tagagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 29234249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 3481654 - 3481750
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacact 3481750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 6034044 - 6034140
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacact 6034140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 23608234 - 23608331
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||||||||||| || |||||||| ||||||    
T  23608234 agagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacact 23608331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 42044468 - 42044371
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||| ||||  | | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  42044468 agagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 42044371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 31910192 - 31910288
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||| ||| ||| |||||||| ||||| ||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacact 31910288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 24995208 - 24995113
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||||||||| || ||||||||||| || ||||||||||||||| | ||||| |||||| ||||||||||||||||||||||| ||||| ||||    
T  24995208 agagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 293 - 372
Target Start/End: Complemental strand, 50526271 - 50526192
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtgga 372  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtgga 50526192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 28480372 - 28480272
Alignment:
Q  289 tatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacac 388  Q
    |||||||| || ||||||||||| ||||||||||||||||||   || | |  ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28480372 tatagagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacac 28480273  T
Q  389 t 389  Q
    |    
T  28480272 t 28480272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 28481247 - 28481147
Alignment:
Q  289 tatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacac 388  Q
    |||||||| || ||||||||||| ||||||||||||||||||   || | |  ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28481247 tatagagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacac 28481148  T
Q  389 t 389  Q
    |    
T  28481147 t 28481147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 28482122 - 28482022
Alignment:
Q  289 tatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacac 388  Q
    |||||||| || ||||||||||| ||||||||||||||||||   || | |  ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28482122 tatagagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacac 28482023  T
Q  389 t 389  Q
    |    
T  28482022 t 28482022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 29977884 - 29977981
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||| | | || |||||| |||||||||| || | | ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  29977884 agagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacact 29977981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacg 360  Q
    |||| |||||||||||||| |||||||||  |||||||||||||| | ||||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 291 - 358
Target Start/End: Original strand, 47986206 - 47986273
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||||| |||||||||| ||||||||||||| ||||||| || |||| ||||||||||||||||||||    
T  47986206 tagagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgaca 47986273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 55475190 - 55475256
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||| ||||||||| ||||||||||||||| | ||||||||||||||||||    
T  55475190 agagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 18924595 - 18924530
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| ||||| |||| | ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgaca 18924530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 29535377 - 29535472
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| ||||||||||||||  |||||||||||||||| |  ||| ||||||||||||||| || ||| | | |||||||| ||||||||||||||||    
T  29535377 gagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacact 29535472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 382
Target Start/End: Complemental strand, 53352660 - 53352577
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||||||||||||||||||||||| |||||||  |||| | | | |||||||||||||||||||||| | ||||||||| |||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaa 53352577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 19670817 - 19670751
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| |  |||||||||||||||||    
T  19670817 agagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 19670751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 47104543 - 47104640
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||| |||||||  ||||| ||||||||||| || ||| | |||||||||||| |||||||| ||    | |||||||||||||||||||    
T  47104543 agagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacact 47104640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 41823930 - 41823978
Alignment:
Q  341 ccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  41823930 ccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacact 41823978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 379
Target Start/End: Complemental strand, 44536847 - 44536760
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccaca 379  Q
    |||||| |||||||||| ||||  ||||||| |||||||||| |||| |||||||||||||||||||| || ||||  | |||||||||    
T  44536847 tagagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccaca 44536760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 50813995 - 50813927
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||||| |||||||||| |||| ||||||||  ||||||||| |||| | ||||||||||||||||||    
T  50813995 atagagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgaca 50813927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 29548060 - 29547994
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||| ||||||||| ||||||| || |||| | ||||||||||||||||||    
T  29548060 agagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 292 - 358
Target Start/End: Original strand, 32766957 - 32767023
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| |||| |||||||| |||||||||| |||| | ||| ||||||||||||||    
T  32766957 agagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgaca 32767023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| ||||||||||||| |||||||||  |||| | ||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 358
Target Start/End: Complemental strand, 17983825 - 17983778
Alignment:
Q  311 acccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 17983778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 387
Target Start/End: Complemental strand, 48647827 - 48647732
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||| |||| ||||| ||| |||||||| ||||||||||  || | | ||||| |||||||| |||||| ||||||||||| || ||||| ||||    
T  48647827 agagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 8343263 - 8343198
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| ||| ||||||||| ||||||| ||||||| | | ||| ||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgaca 8343198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 18769114 - 18769199
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaa 383  Q
    |||||||||| ||| ||||| ||  | ||||||||| | | | ||||||||||||||||||||| |||| ||  ||||||||||||    
T  18769114 atgatacataaacatccttatgtacccatacaccctctaacacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaa 18769199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 29589831 - 29589751
Alignment:
Q  301 atacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||||| |||||||||| || |||||||||| |||| | |||||||||||||||| | || | ||  ||||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaa 29589751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 40145407 - 40145503
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 40145503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 18520981 - 18520888
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 18520888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 2740272 - 2740370
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  2740272 tagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 2740370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 36733043 - 36732946
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||| ||||||    
T  36733043 agagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacact 36732946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 13811651 - 13811748
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||| |||||||||||||||||||||| ||||||| | ||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  13811651 agagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 13811748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 14831814 - 14831910
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| | ||||| |||||||||||||||||||||||||| ||| ||||| ||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacact 14831910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 28177775 - 28177871
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacact 28177871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 33149738 - 33149642
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||  |||||||||||||| | |||||||||||| ||||||||||||||||||| ||| ||||| ||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 33149642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 35785199 - 35785295
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||||||||||||| ||||||| ||| ||||| ||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacact 35785295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 42414402 - 42414306
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacact 42414306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 35943992 - 35943896
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||||||||||||| ||||||| | ||||| | |||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacact 35943896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 15409711 - 15409614
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||| |||||||||||||||||  |||||| | ||||||||||||||||||||||| ||| |||||||| ||||| ||||||    
T  15409711 agagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacact 15409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 6679696 - 6679792
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||| |||||||||||||| | ||||||| ||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  6679696 tagagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 382
Target Start/End: Complemental strand, 41470518 - 41470427
Alignment:
Q  291 tagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||||||| ||||||||||||| ||||||| ||||||| ||||| | || || | |||||||||||||||||||||||||||||| |||||    
T  41470518 tagagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaa 41470427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 31008987 - 31009084
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||| ||| |||||||||||||||||  |||  | | |||||||||||||||||||||||||||||||| ||| ||||| ||||||    
T  31008987 agagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 31009084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 294 - 352
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaat 352  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 3921366 - 3921300
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  3921366 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 3921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 289 - 358
Target Start/End: Complemental strand, 2252272 - 2252203
Alignment:
Q  289 tatagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||||||| |||||||||| ||| ||||||||| |||||||||| |||| | ||||||||||||||||||    
T  2252272 tatagagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 6260101 - 6260005
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||| ||| || |||||||||||||||||||| | | |||| ||||||||| |||| | ||||| |||||| |||| || ||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacact 6260005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 26720516 - 26720612
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| | | | ||| ||||||||||||||| | ||| |||| ||| ||||| ||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacact 26720612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 26990265 - 26990361
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| | | | ||| ||||||||||||||| | ||| |||| ||| ||||| ||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacact 26990361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 9603812 - 9603909
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||| ||| |||||||||| ||||||| | || | | | ||||||||||||||||| | ||||  ||||||||| |||| ||||||    
T  9603812 agagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacact 9603909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 38296202 - 38296299
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||   |||||||| |||||||||  || ||| ||||||||||||| |||||||||  ||||||| || |||||| ||||||    
T  38296202 agagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 382
Target Start/End: Original strand, 31132389 - 31132433
Alignment:
Q  338 tatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  31132389 tatccacacaaaaatctgacaagtagtcacgtggaccccgcacaa 31132433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 20073616 - 20073520
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||| ||||||| | |||| |||||||||||||||||| |  |||| ||||||||  |||||   |||||||||||  ||||| ||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacact 20073520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 361
Target Start/End: Complemental strand, 33825424 - 33825356
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    |||||||||| ||||||||  |||||||| |||||||| | |||| | ||||| |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgt 33825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 356
Target Start/End: Complemental strand, 39688998 - 39688934
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctga 356  Q
    ||||| |||||||||| ||||||||| ||| ||||||| || |||| | ||||||||||||||||    
T  39688998 agagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctga 39688934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  298 atgatacatagacacccttaggtgacaataca-ccctttgatatccacacaaaaatctga 356  Q
    |||||||||||||| ||||||||| ||||||| ||| |||| | ||||||||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 16327902 - 16327997
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||| ||| | | ||||||||| ||||||| || |||| | ||||| |||||||||||||||  ||| ||| ||| ||||||| ||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacact 16327997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 21370052 - 21370098
Alignment:
Q  341 ccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||| ||||||||||||| || |||||||||||||| ||||||||||    
T  21370052 ccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 389
Target Start/End: Complemental strand, 39557571 - 39557521
Alignment:
Q  339 atccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||  |||| ||||||||| |||| ||||||    
T  39557571 atccacacaaaaatctgacacgtgatcacatggaccccatacaatcacact 39557521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 387
Target Start/End: Original strand, 25831334 - 25831379
Alignment:
Q  342 cacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||| |||||||| |||||| |||| ||||||||||||||||||||    
T  25831334 cacaaaaaaatctaacacgtggtcatgtggaccccacacaaacaca 25831379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 22512467 - 22512408
Alignment:
Q  323 caatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaa 383  Q
    ||||||||||||| | |||||||||||| |||||||||| |  || |||||||||||||||    
T  22512467 caatacacccttt-acatccacacaaaattctgacacgtggcaacttggaccccacacaaa 22512408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 32869678 - 32869774
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 32869774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 22880755 - 22880662
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacact 22880662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 17598554 - 17598650
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||| | ||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacact 17598650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 31109500 - 31109417
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggacccc 376  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagacccc 31109417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 11427613 - 11427714
Alignment:
Q  290 atagagtaatgatacatagacaccct--taggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    ||||||||||||||||||||||||||  |||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  11427613 atagagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T
Q  388 ct 389  Q
    ||    
T  11427713 ct 11427714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 6209566 - 6209469
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||| |  |||||||||||||| |||||||||||||||||||| ||| | ||||||    
T  6209566 agagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 23128224 - 23128131
Alignment:
Q  296 taatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||| ||||||||| ||| |||| |||||| ||||||| | |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  23128224 taatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacact 23128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 372
Target Start/End: Original strand, 15832576 - 15832656
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtgga 372  Q
    |||||||||||||||||||||| ||||||||||||| | | ||||| | |||||||||||| |||||||||||||||||||    
T  15832576 agagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtgga 15832656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 389
Target Start/End: Original strand, 31976245 - 31976344
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||| |||||||||||||| ||||||||| ||||| ||||||| | | ||||||||||||||||||||| ||||| || ||||| ||||| ||||||    
T  31976245 atagagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacact 31976344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 29857827 - 29857923
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| |||| || ||||||||| ||| | | |||||||||||||||||||||||| ||||||| ||| || || ||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacact 29857923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 31953130 - 31953034
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||| ||||||| ||||||||| |||||||||| |||| | ||||| |||||||||||| ||  ||| ||||||| ||||||||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacact 31953034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 28536582 - 28536492
Alignment:
Q  297 aatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||| ||| ||||||||| ||||||| || |||| | ||||||||||||||||||||  |||| ||||||||||||||| ||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacact 28536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 946377 - 946452
Alignment:
Q  294 agtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgt 369  Q
    ||||| |||||||||||| |||||||||| |||||||||||||| | | || |||||||||||||| |||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgt 946452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 15990143 - 15990077
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  15990143 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15990077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 30341461 - 30341395
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    ||||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  30341461 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 30341395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 31110860 - 31110765
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||| |  | |||||||||||||||||||  ||| |||||||  ||||| ||||||    
T  31110860 agagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacact 31110765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 358
Target Start/End: Complemental strand, 15508124 - 15508059
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgaca 358  Q
    |||| |||||||||| ||||||||||||| |||||||||| |||| | ||||||||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 387
Target Start/End: Complemental strand, 9379807 - 9379718
Alignment:
Q  298 atgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||||||||||| |||||| |||||||||| || |||| | ||| |||||||| |||||||| | || ||||| | ||||||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacaca 9379718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Original strand, 24203921 - 24203984
Alignment:
Q  319 gtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaa 383  Q
    ||||||||||||||||| | |||||||||||| |||||||||| |  || |||||||||||||||    
T  24203921 gtgacaatacacccttt-acatccacacaaaattctgacacgtggcaacttggaccccacacaaa 24203984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 382
Target Start/End: Original strand, 4231548 - 4231637
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||| ||||| |||| ||| | ||||||| |||||||||| |||  | ||||||||||||||||||||| | ||  |||||||| |||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaa 4231637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 361
Target Start/End: Original strand, 12732481 - 12732550
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgt 361  Q
    ||||||||||||||||||||  |||| ||| ||||| |  | |||| | |||||||||||||||||||||    
T  12732481 agagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgt 12732550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 22422121 - 22422084
Alignment:
Q  290 atagagtaatgatacatagacacccttaggtgacaata 327  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  22422121 atagagtaatgatacatagacatccttaggtggcaata 22422084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 292 - 374
Target Start/End: Complemental strand, 10210 - 10128
Alignment:
Q  292 agagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggacc 374  Q
    ||||| |||||||||||||||| ||||||| ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  10210 agagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggacc 10128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 1029 - 933
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||| | ||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||| | ||| ||||| ||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacact 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 1029 - 933
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||| | ||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||| | ||| ||||| ||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacact 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 382
Target Start/End: Complemental strand, 8963 - 8874
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaa 382  Q
    |||| |||||| ||||||| ||||| ||||||||||||  ||||| ||| |||||||||| |||||| ||||||||||||||||||||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaa 8874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 4029 - 4125
Alignment:
Q  293 gagtaatgatacatagacacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    ||||||||||||||||||||| |||| || ||||||||| ||| | | |||||||||||||||||||||||| ||||||| ||| || || ||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacact 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 152514 - 152594
Alignment:
Q  309 acacccttaggtgacaatacaccctttgatatccacacaaaaatctgacacgtagtcacgtggaccccacacaaacacact 389  Q
    |||||||| |||| |||||||||| |||| | |||||||||||||||||| || ||||  |||| ||| |||||| |||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacact 152594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 17100 - 17148
Alignment:
Q  339 atccacacaaaaatctgacacgtagtcacgtggaccccacacaaacaca 387  Q
    |||||||||||||||||||| || ||||| |||||||| ||||| ||||    
T  17100 atccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University