View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3148_high_4 (Length: 276)
Name: NF3148_high_4
Description: NF3148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3148_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 42 - 261
Target Start/End: Original strand, 47195683 - 47195902
Alignment:
| Q |
42 |
attacaatgatgatgaccacccacatatattaatcagcttccaaataattatgattacataaaaatcaataatataatgtatttctatcaacaaattttc |
141 |
Q |
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| T |
47195683 |
attacaatgatgatgaccacccacatatattaatcagcttccaaataattatgattacataaaaatcaataatataatgtatttctatcaacaaattttc |
47195782 |
T |
|
| Q |
142 |
agggattaaatgtaggggtttgatcattttcagaaggatataacgcctgatacattttcctatcaattaaattcctataaggatcctcctccctcttctt |
241 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47195783 |
agggattaaatgtaggggtttgatcattttcagaaggatataacgcctgatacattttcctatcaattaaattcctataaggatcctcctccctcttctt |
47195882 |
T |
|
| Q |
242 |
gatcaagtaatctatgtttt |
261 |
Q |
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|||||||||||||||||||| |
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| T |
47195883 |
gatcaagtaatctatgtttt |
47195902 |
T |
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