View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3149_low_13 (Length: 247)

Name: NF3149_low_13
Description: NF3149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3149_low_13
NF3149_low_13
[»] chr4 (59 HSPs)
chr4 (1-240)||(49523032-49523271)
chr4 (92-240)||(41781538-41781686)
chr4 (96-240)||(41761723-41761867)
chr4 (93-237)||(51011926-51012070)
chr4 (93-240)||(48813787-48813934)
chr4 (93-237)||(35404425-35404569)
chr4 (83-240)||(43519414-43519571)
chr4 (92-182)||(49524733-49524823)
chr4 (88-237)||(52868129-52868278)
chr4 (96-240)||(11601674-11601817)
chr4 (114-240)||(48646724-48646850)
chr4 (135-240)||(42980677-42980782)
chr4 (91-182)||(35401747-35401838)
chr4 (92-182)||(51013886-51013976)
chr4 (93-182)||(33264382-33264471)
chr4 (103-182)||(39345574-39345653)
chr4 (88-182)||(319268-319362)
chr4 (130-228)||(35996100-35996198)
chr4 (92-182)||(43507166-43507256)
chr4 (93-182)||(4173740-4173829)
chr4 (93-182)||(43508653-43508742)
chr4 (93-174)||(48645255-48645336)
chr4 (96-240)||(2693230-2693373)
chr4 (92-182)||(20493826-20493916)
chr4 (93-182)||(4169686-4169775)
chr4 (94-183)||(20819986-20820075)
chr4 (93-182)||(33266010-33266099)
chr4 (130-212)||(44794765-44794847)
chr4 (92-179)||(320903-320990)
chr4 (96-183)||(2691377-2691463)
chr4 (130-212)||(47941848-47941930)
chr4 (98-182)||(43521109-43521193)
chr4 (91-182)||(833221-833312)
chr4 (91-182)||(42982452-42982543)
chr4 (92-182)||(5439647-5439737)
chr4 (92-182)||(11254118-11254208)
chr4 (130-216)||(44558494-44558580)
chr4 (92-182)||(5437810-5437900)
chr4 (130-212)||(10372711-10372793)
chr4 (92-212)||(835012-835132)
chr4 (96-216)||(7149542-7149662)
chr4 (135-227)||(13450970-13451062)
chr4 (130-230)||(39083676-39083776)
chr4 (141-216)||(2827452-2827527)
chr4 (171-230)||(44972489-44972548)
chr4 (130-212)||(10762618-10762700)
chr4 (103-216)||(51041932-51042044)
chr4 (130-230)||(5484577-5484677)
chr4 (130-230)||(39921531-39921631)
chr4 (130-230)||(43779854-43779954)
chr4 (132-205)||(27624845-27624918)
chr4 (129-182)||(34460261-34460314)
chr4 (130-227)||(39189419-39189516)
chr4 (105-174)||(54387890-54387958)
chr4 (130-230)||(32652136-32652236)
chr4 (130-182)||(44792971-44793023)
chr4 (130-230)||(44994274-44994374)
chr4 (130-182)||(47942748-47942800)
chr4 (171-223)||(50131240-50131292)
[»] chr8 (66 HSPs)
chr8 (91-237)||(8609787-8609933)
chr8 (93-240)||(13282478-13282625)
chr8 (91-240)||(26242311-26242460)
chr8 (93-240)||(41042581-41042728)
chr8 (91-240)||(13486096-13486245)
chr8 (92-237)||(38547227-38547372)
chr8 (93-237)||(13108336-13108480)
chr8 (93-240)||(22272334-22272483)
chr8 (96-240)||(42941777-42941921)
chr8 (91-240)||(41825641-41825790)
chr8 (93-240)||(7745109-7745256)
chr8 (94-240)||(5036446-5036596)
chr8 (93-240)||(27691154-27691301)
chr8 (136-240)||(9673162-9673266)
chr8 (93-240)||(33708801-33708947)
chr8 (93-182)||(42943426-42943515)
chr8 (88-182)||(5038062-5038155)
chr8 (93-182)||(22273891-22273980)
chr8 (88-174)||(34681074-34681160)
chr8 (93-182)||(27692837-27692926)
chr8 (91-182)||(35509212-35509303)
chr8 (92-182)||(29237150-29237240)
chr8 (158-240)||(40339677-40339759)
chr8 (93-174)||(26238726-26238807)
chr8 (94-182)||(33707207-33707295)
chr8 (88-182)||(13106799-13106893)
chr8 (92-182)||(33762713-33762803)
chr8 (92-182)||(38548831-38548921)
chr8 (93-182)||(601704-601793)
chr8 (93-182)||(35510819-35510908)
chr8 (93-182)||(8608237-8608327)
chr8 (114-240)||(15305818-15305944)
chr8 (114-240)||(15486187-15486313)
chr8 (92-182)||(33761068-33761158)
chr8 (93-182)||(29239187-29239276)
chr8 (93-240)||(27406894-27407041)
chr8 (88-174)||(43262145-43262231)
chr8 (103-216)||(31821428-31821541)
chr8 (91-182)||(13283995-13284086)
chr8 (96-182)||(9671980-9672066)
chr8 (92-182)||(15308261-15308351)
chr8 (92-182)||(15488630-15488720)
chr8 (93-182)||(13484545-13484634)
chr8 (103-216)||(37526024-37526137)
chr8 (93-174)||(41823890-41823971)
chr8 (130-228)||(8654537-8654634)
chr8 (130-212)||(31201148-31201230)
chr8 (92-182)||(41040719-41040809)
chr8 (130-216)||(42897775-42897861)
chr8 (103-228)||(38882786-38882911)
chr8 (129-216)||(33750385-33750472)
chr8 (105-182)||(3151969-3152046)
chr8 (103-216)||(32822371-32822484)
chr8 (136-216)||(1320660-1320740)
chr8 (158-230)||(9184448-9184520)
chr8 (93-152)||(600760-600819)
chr8 (96-182)||(27404213-27404299)
chr8 (103-216)||(462371-462484)
chr8 (115-172)||(15562446-15562503)
chr8 (168-233)||(37801541-37801606)
chr8 (129-182)||(44620671-44620724)
chr8 (171-230)||(15145749-15145808)
chr8 (135-230)||(40020622-40020717)
chr8 (103-229)||(28433704-28433830)
chr8 (134-182)||(1322316-1322364)
chr8 (94-150)||(9795535-9795591)
[»] chr5 (45 HSPs)
chr5 (91-237)||(17574316-17574462)
chr5 (88-240)||(36057590-36057742)
chr5 (93-237)||(7267843-7267987)
chr5 (93-237)||(2179787-2179931)
chr5 (93-237)||(30468260-30468404)
chr5 (93-240)||(34327635-34327782)
chr5 (92-236)||(8539674-8539818)
chr5 (91-240)||(18624985-18625134)
chr5 (93-240)||(2854304-2854450)
chr5 (93-182)||(30463900-30463989)
chr5 (92-240)||(24541188-24541337)
chr5 (91-182)||(12738736-12738827)
chr5 (91-182)||(12801559-12801650)
chr5 (93-240)||(29621758-29621905)
chr5 (93-182)||(8541271-8541360)
chr5 (82-240)||(40780539-40780697)
chr5 (93-182)||(2852886-2852975)
chr5 (93-182)||(34328827-34328916)
chr5 (93-240)||(42473584-42473731)
chr5 (92-182)||(7269446-7269536)
chr5 (91-182)||(28813765-28813858)
chr5 (93-182)||(21842992-21843081)
chr5 (96-182)||(28822090-28822176)
chr5 (91-182)||(32134229-32134320)
chr5 (92-182)||(40782211-40782301)
chr5 (103-184)||(43492131-43492212)
chr5 (95-182)||(17577935-17578022)
chr5 (130-216)||(18728603-18728689)
chr5 (134-216)||(32087555-32087637)
chr5 (93-182)||(29620138-29620227)
chr5 (103-222)||(15459184-15459303)
chr5 (130-216)||(35395370-35395456)
chr5 (130-228)||(38178082-38178180)
chr5 (130-228)||(38205306-38205404)
chr5 (103-216)||(43318061-43318174)
chr5 (96-180)||(41493847-41493931)
chr5 (197-240)||(28819391-28819434)
chr5 (149-228)||(35292371-35292450)
chr5 (103-205)||(38596878-38596980)
chr5 (128-217)||(24496778-24496867)
chr5 (93-152)||(42471548-42471607)
chr5 (149-218)||(27349212-27349281)
chr5 (130-182)||(32835913-32835965)
chr5 (149-212)||(27075876-27075939)
chr5 (168-216)||(38597020-38597068)
[»] chr3 (81 HSPs)
chr3 (93-237)||(53190759-53190903)
chr3 (88-230)||(54898432-54898574)
chr3 (92-237)||(27899081-27899226)
chr3 (89-240)||(51684606-51684757)
chr3 (92-240)||(21348722-21348870)
chr3 (93-237)||(2226152-2226296)
chr3 (95-240)||(43765139-43765284)
chr3 (114-237)||(35905712-35905835)
chr3 (88-237)||(46112482-46112631)
chr3 (88-240)||(30599915-30600067)
chr3 (93-237)||(41977750-41977894)
chr3 (93-240)||(23293167-23293314)
chr3 (96-237)||(2377032-2377173)
chr3 (96-240)||(42279510-42279654)
chr3 (93-240)||(17515310-17515457)
chr3 (123-240)||(46197750-46197867)
chr3 (92-240)||(44794207-44794354)
chr3 (93-240)||(3152215-3152362)
chr3 (99-219)||(2660218-2660338)
chr3 (94-182)||(2378983-2379071)
chr3 (93-182)||(23291570-23291659)
chr3 (158-240)||(48830803-48830885)
chr3 (93-182)||(3150252-3150341)
chr3 (91-182)||(53187740-53187831)
chr3 (171-237)||(7884873-7884939)
chr3 (92-182)||(30598336-30598426)
chr3 (92-182)||(53094273-53094363)
chr3 (93-182)||(611222-611311)
chr3 (93-182)||(38193510-38193599)
chr3 (93-182)||(41979352-41979441)
chr3 (167-240)||(44276193-44276266)
chr3 (93-182)||(46308807-46308896)
chr3 (93-182)||(46310436-46310525)
chr3 (91-182)||(46609147-46609238)
chr3 (90-237)||(600722-600853)
chr3 (134-240)||(19987591-19987697)
chr3 (96-182)||(42282473-42282559)
chr3 (93-182)||(46611303-46611392)
chr3 (103-228)||(48633887-48634012)
chr3 (93-182)||(54900074-54900163)
chr3 (92-182)||(44267980-44268070)
chr3 (96-182)||(54412547-54412633)
chr3 (93-182)||(35903825-35903914)
chr3 (93-182)||(38191895-38191984)
chr3 (90-182)||(27897148-27897239)
chr3 (103-209)||(23774162-23774268)
chr3 (93-154)||(7884927-7884988)
chr3 (93-182)||(44795890-44795979)
chr3 (93-174)||(51686402-51686483)
chr3 (103-229)||(45257208-45257334)
chr3 (103-228)||(2977318-2977443)
chr3 (103-228)||(23888761-23888886)
chr3 (93-182)||(28626411-28626500)
chr3 (103-228)||(31887441-31887566)
chr3 (93-174)||(48829356-48829437)
chr3 (93-182)||(53092623-53092712)
chr3 (98-182)||(2661908-2661992)
chr3 (89-181)||(35572525-35572617)
chr3 (103-182)||(17516973-17517052)
chr3 (103-238)||(40508890-40509025)
chr3 (92-182)||(46114105-46114196)
chr3 (93-182)||(7883328-7883417)
chr3 (103-228)||(18430260-18430385)
chr3 (149-227)||(1845840-1845918)
chr3 (142-216)||(45898349-45898423)
chr3 (165-230)||(5133068-5133133)
chr3 (93-182)||(21350605-21350694)
chr3 (132-228)||(33852659-33852755)
chr3 (130-213)||(33113184-33113267)
chr3 (130-212)||(41021008-41021090)
chr3 (129-182)||(48635375-48635428)
chr3 (171-228)||(54092764-54092821)
chr3 (134-182)||(43767047-43767095)
chr3 (133-216)||(25535250-25535333)
chr3 (135-182)||(33051467-33051514)
chr3 (176-230)||(5125884-5125938)
chr3 (158-216)||(24382894-24382952)
chr3 (176-230)||(41623735-41623789)
chr3 (130-182)||(1847647-1847699)
chr3 (158-230)||(23876965-23877037)
chr3 (130-182)||(33111878-33111930)
[»] chr2 (55 HSPs)
chr2 (92-240)||(39664745-39664893)
chr2 (92-237)||(16763075-16763220)
chr2 (91-238)||(44709744-44709891)
chr2 (92-240)||(2766933-2767081)
chr2 (93-237)||(19908246-19908391)
chr2 (91-240)||(40560221-40560370)
chr2 (96-240)||(17696209-17696353)
chr2 (97-240)||(42519202-42519346)
chr2 (92-240)||(14389081-14389229)
chr2 (92-240)||(39455168-39455316)
chr2 (129-237)||(16377197-16377305)
chr2 (93-240)||(6797507-6797654)
chr2 (88-182)||(39663149-39663243)
chr2 (90-182)||(16376733-16376825)
chr2 (92-240)||(37020507-37020655)
chr2 (96-175)||(19906685-19906764)
chr2 (93-218)||(24208061-24208186)
chr2 (92-218)||(6786000-6786126)
chr2 (93-182)||(39456780-39456869)
chr2 (96-240)||(37645490-37645634)
chr2 (91-182)||(16764611-16764702)
chr2 (92-182)||(6783363-6783453)
chr2 (88-182)||(14387344-14387438)
chr2 (93-199)||(19581414-19581520)
chr2 (93-182)||(34400314-34400403)
chr2 (88-183)||(31475079-31475174)
chr2 (96-182)||(6799408-6799494)
chr2 (140-230)||(17946141-17946231)
chr2 (93-182)||(24205598-24205687)
chr2 (103-228)||(25619670-25619795)
chr2 (96-183)||(37646477-37646564)
chr2 (130-212)||(15372536-15372618)
chr2 (92-182)||(37022185-37022275)
chr2 (130-228)||(37417310-37417408)
chr2 (93-182)||(40561878-40561967)
chr2 (92-182)||(2577480-2577570)
chr2 (142-216)||(29909661-29909735)
chr2 (130-212)||(41706576-41706658)
chr2 (149-230)||(7744099-7744180)
chr2 (91-183)||(162074-162165)
chr2 (130-216)||(39593-39679)
chr2 (103-217)||(11315335-11315449)
chr2 (130-200)||(15432365-15432435)
chr2 (88-133)||(42517553-42517598)
chr2 (171-230)||(62807-62866)
chr2 (130-229)||(42879393-42879491)
chr2 (103-205)||(10716893-10716995)
chr2 (168-233)||(15807903-15807968)
chr2 (168-233)||(32608051-32608116)
chr2 (135-215)||(26584819-26584899)
chr2 (149-216)||(39398-39465)
chr2 (176-230)||(13999890-13999944)
chr2 (130-182)||(41144-41196)
chr2 (130-230)||(11023000-11023100)
chr2 (130-182)||(41708432-41708484)
[»] chr1 (61 HSPs)
chr1 (91-237)||(25278348-25278494)
chr1 (92-237)||(6818658-6818803)
chr1 (93-240)||(2869579-2869726)
chr1 (90-240)||(27087280-27087430)
chr1 (85-237)||(34778118-34778270)
chr1 (93-237)||(37344342-37344486)
chr1 (91-237)||(4855946-4856092)
chr1 (91-237)||(31238475-31238621)
chr1 (93-236)||(50556078-50556221)
chr1 (89-240)||(51896129-51896280)
chr1 (92-240)||(3013447-3013601)
chr1 (92-240)||(46583533-46583681)
chr1 (96-240)||(33602621-33602765)
chr1 (135-240)||(15104483-15104588)
chr1 (96-240)||(52643597-52643736)
chr1 (89-182)||(31236815-31236908)
chr1 (92-195)||(25278975-25279078)
chr1 (88-240)||(9121645-9121797)
chr1 (94-182)||(50554164-50554252)
chr1 (90-182)||(26223584-26223676)
chr1 (82-161)||(6816854-6816933)
chr1 (93-240)||(47013059-47013206)
chr1 (96-182)||(3011858-3011944)
chr1 (96-182)||(51894570-51894656)
chr1 (93-182)||(8169568-8169657)
chr1 (88-182)||(25276737-25276831)
chr1 (91-173)||(25278852-25278934)
chr1 (93-182)||(34776569-34776658)
chr1 (93-182)||(46582010-46582099)
chr1 (93-174)||(52641888-52641969)
chr1 (93-180)||(8167942-8168029)
chr1 (91-182)||(9120037-9120128)
chr1 (92-174)||(37088144-37088226)
chr1 (93-182)||(4854410-4854499)
chr1 (93-182)||(37345962-37346051)
chr1 (90-153)||(45044946-45045009)
chr1 (93-182)||(2871076-2871165)
chr1 (103-228)||(42134492-42134617)
chr1 (149-230)||(51121961-51122042)
chr1 (93-161)||(33599187-33599255)
chr1 (91-182)||(27089279-27089370)
chr1 (104-182)||(33599229-33599307)
chr1 (130-228)||(36895499-36895597)
chr1 (93-182)||(1444181-1444270)
chr1 (93-182)||(47011456-47011545)
chr1 (132-212)||(27940647-27940727)
chr1 (130-228)||(31801670-31801768)
chr1 (103-228)||(46638796-46638921)
chr1 (132-228)||(45380973-45381069)
chr1 (94-157)||(1442551-1442614)
chr1 (166-240)||(1442594-1442668)
chr1 (130-213)||(44157470-44157553)
chr1 (103-182)||(44159296-44159375)
chr1 (130-200)||(18183960-18184030)
chr1 (176-230)||(43868697-43868751)
chr1 (169-230)||(5783440-5783501)
chr1 (135-216)||(35479976-35480057)
chr1 (168-233)||(51544210-51544275)
chr1 (130-182)||(5784869-5784921)
chr1 (130-182)||(27952502-27952554)
chr1 (130-182)||(35478124-35478176)
[»] chr7 (71 HSPs)
chr7 (93-240)||(37115503-37115650)
chr7 (93-237)||(39859209-39859353)
chr7 (96-240)||(24228386-24228530)
chr7 (93-240)||(38474120-38474267)
chr7 (91-237)||(34776895-34777041)
chr7 (93-237)||(6602335-6602479)
chr7 (93-237)||(45359336-45359480)
chr7 (92-240)||(47386186-47386334)
chr7 (93-240)||(30940402-30940549)
chr7 (115-237)||(13168142-13168267)
chr7 (91-240)||(27666042-27666191)
chr7 (93-237)||(29996494-29996638)
chr7 (96-228)||(37796170-37796302)
chr7 (93-240)||(56330-56477)
chr7 (91-182)||(39857643-39857734)
chr7 (93-182)||(23904583-23904672)
chr7 (93-240)||(20478042-20478189)
chr7 (149-240)||(48852324-48852415)
chr7 (92-182)||(13169683-13169773)
chr7 (134-240)||(35693347-35693455)
chr7 (93-182)||(37113941-37114030)
chr7 (90-182)||(35403619-35403711)
chr7 (91-182)||(6605397-6605488)
chr7 (96-182)||(48227941-48228027)
chr7 (93-182)||(34774998-34775087)
chr7 (91-182)||(22155847-22155938)
chr7 (91-182)||(22211762-22211853)
chr7 (93-182)||(78014-78103)
chr7 (96-230)||(13018036-13018172)
chr7 (103-216)||(33038798-33038911)
chr7 (94-182)||(24226582-24226670)
chr7 (96-182)||(27664433-27664519)
chr7 (93-182)||(35401969-35402058)
chr7 (97-182)||(35691431-35691516)
chr7 (90-179)||(45361279-45361368)
chr7 (93-182)||(47384294-47384383)
chr7 (92-182)||(20479719-20479809)
chr7 (171-237)||(23906241-23906307)
chr7 (102-183)||(13039641-13039722)
chr7 (93-182)||(46437107-46437196)
chr7 (130-216)||(2167516-2167602)
chr7 (130-228)||(46996691-46996789)
chr7 (93-154)||(23906295-23906356)
chr7 (88-153)||(29994901-29994966)
chr7 (93-170)||(38549547-38549624)
chr7 (130-228)||(23953842-23953940)
chr7 (149-230)||(1546343-1546424)
chr7 (135-212)||(35344295-35344372)
chr7 (96-183)||(37791657-37791744)
chr7 (93-176)||(46439539-46439622)
chr7 (135-212)||(8423286-8423363)
chr7 (103-228)||(47341675-47341800)
chr7 (133-237)||(11682821-11682925)
chr7 (130-230)||(45463707-45463807)
chr7 (171-230)||(6056844-6056903)
chr7 (103-229)||(27955380-27955506)
chr7 (203-240)||(46439507-46439544)
chr7 (103-216)||(46812583-46812696)
chr7 (128-216)||(366733-366821)
chr7 (166-230)||(23962377-23962441)
chr7 (114-182)||(48311733-48311801)
chr7 (171-230)||(31913547-31913606)
chr7 (134-213)||(38614916-38614994)
chr7 (130-200)||(38613498-38613568)
chr7 (103-217)||(40784356-40784470)
chr7 (129-230)||(48303636-48303737)
chr7 (158-230)||(7401958-7402030)
chr7 (130-182)||(8421453-8421505)
chr7 (168-216)||(19712264-19712312)
chr7 (171-215)||(31915040-31915084)
chr7 (130-182)||(45465186-45465238)
[»] chr6 (39 HSPs)
chr6 (88-237)||(32516872-32517021)
chr6 (92-237)||(32439071-32439216)
chr6 (96-240)||(7372935-7373079)
chr6 (94-240)||(20523367-20523513)
chr6 (92-240)||(13613559-13613707)
chr6 (92-240)||(10568398-10568546)
chr6 (94-237)||(11355223-11355366)
chr6 (92-240)||(6899484-6899632)
chr6 (146-240)||(9398713-9398807)
chr6 (93-240)||(32455868-32456015)
chr6 (93-182)||(11357194-11357283)
chr6 (108-240)||(14338452-14338584)
chr6 (171-240)||(7049835-7049904)
chr6 (93-174)||(10569927-10570008)
chr6 (114-238)||(3456769-3456893)
chr6 (93-182)||(9400035-9400124)
chr6 (93-182)||(20525334-20525423)
chr6 (93-182)||(32518497-32518586)
chr6 (88-182)||(7371170-7371264)
chr6 (93-174)||(6902906-6902986)
chr6 (92-172)||(7051255-7051335)
chr6 (92-174)||(13610689-13610771)
chr6 (93-182)||(18645104-18645192)
chr6 (130-228)||(3018421-3018519)
chr6 (92-182)||(3480657-3480747)
chr6 (88-158)||(8605349-8605419)
chr6 (92-182)||(32454247-32454337)
chr6 (96-174)||(21068628-21068706)
chr6 (97-171)||(33276805-33276879)
chr6 (135-212)||(2968181-2968258)
chr6 (93-161)||(32437140-32437208)
chr6 (103-222)||(30891134-30891253)
chr6 (130-212)||(4641392-4641474)
chr6 (130-212)||(29077365-29077447)
chr6 (130-212)||(29112337-29112419)
chr6 (97-154)||(7049790-7049847)
chr6 (168-233)||(11163875-11163940)
chr6 (130-230)||(17952029-17952129)
chr6 (172-229)||(25172097-25172154)
[»] scaffold1454 (1 HSPs)
scaffold1454 (96-237)||(1266-1407)
[»] scaffold0058 (3 HSPs)
scaffold0058 (91-240)||(3292-3441)
scaffold0058 (91-240)||(4464-4613)
scaffold0058 (91-182)||(14343-14434)
[»] scaffold0564 (1 HSPs)
scaffold0564 (95-237)||(8264-8404)
[»] scaffold0345 (1 HSPs)
scaffold0345 (93-182)||(1555-1644)
[»] scaffold0081 (1 HSPs)
scaffold0081 (92-182)||(54258-54348)
[»] scaffold0002 (1 HSPs)
scaffold0002 (100-169)||(436272-436341)
[»] scaffold1712 (1 HSPs)
scaffold1712 (90-182)||(979-1071)
[»] scaffold0024 (1 HSPs)
scaffold0024 (171-238)||(37282-37349)
[»] scaffold0477 (1 HSPs)
scaffold0477 (130-212)||(6639-6721)
[»] scaffold0092 (1 HSPs)
scaffold0092 (168-233)||(36834-36899)
[»] scaffold0204 (1 HSPs)
scaffold0204 (171-230)||(30458-30517)


Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 49523032 - 49523271
Alignment:
Q  1 gtgagtcagattggaaggactataggtcagcagttagggcagagggttcttggtcgaatcaagctaattcagaattttgtttatttctttttgactaata 100  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  49523032 gtgagtctgattggaaggactataggttagcagttagggcagagggttcttggtcgaatcaagctaactcagaattttgtttatttcttttttactaata 49523131  T
Q  101 cctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaa 200  Q
    ||||||||||||  |||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  49523132 cctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaa 49523231  T
Q  201 tggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  49523232 tggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 41781538 - 41781686
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  41781538 tgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacat 41781637  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41781638 ccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| | | |||||||||| |||||||||||||||| ||||||||||||||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 48813787 - 48813934
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||| ||||||| | ||||||  ||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||| |||| | ||||||||||||||||||||  |||||||||| | |||||||| |||||| |||||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    || ||||||||||| ||||||||||||||||||||||||||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 43519414 - 43519571
Alignment:
Q  83 atttctttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||| ||| |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  43519414 atttcatttggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43519513  T
Q  183 tacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||| ||||||||||||   ||||||||||||||||| ||| ||| | ||||||||||    
T  43519514 tacaaacgtccatcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 49524823 - 49524733
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49524823 tgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 49524733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 88 - 237
Target Start/End: Complemental strand, 52868278 - 52868129
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacag 187  Q
    |||||||||||||  || | ||| | |||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||| |||||||| ||||    
T  52868278 tttttgactaatatttcgatttcctccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacag 52868179  T
Q  188 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||| | |||||||||||| || |||||||||||||||||||||| |||||    
T  52868178 acgcctatcaaaatggtcacttcgtccaaaagctccgttagtggcgatga 52868129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 11601674 - 11601817
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||  ||||  ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaatttatccccaaattttgcaaaatatatatt-agtccctgaattttacagacgtccat 11601772  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||| ||||||| ||||| ||||| |||||||| || ||||||    
T  11601773 caaaatagtccctctgtccacaagcttcgttagtgatgctgatgt 11601817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 48646850 - 48646724
Alignment:
Q  114 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    |||||||||| |||| || |  |||||||||| ||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  48646850 cttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtc 48646751  T
Q  214 caaaagctccgttagtggtgatgatgt 240  Q
    |||||||| ||||||||||||||||||    
T  48646750 caaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 42980677 - 42980782
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtga 234  Q
    |||||| |||| |||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42980677 caaatttgtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtga 42980776  T
Q  235 tgatgt 240  Q
    ||||||    
T  42980777 tgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 35401747 - 35401838
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||| |||||||    
T  35401747 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 35401838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 51013976 - 51013886
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| | | |||||||||||||    
T  51013976 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaattt 51013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 33264382 - 33264471
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||| |||||||||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaattt 33264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 39345574 - 39345653
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaattt 39345653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 319268 - 319362
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||| | ||||| |||||||||    
T  319268 ttttcgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 35996100 - 35996198
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||||||||||| |||| ||||||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||||||  ||||||||||    
T  35996100 tcggtcaaattcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaagtgctccgttag 35996198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 43507166 - 43507256
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  43507166 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 4173829 - 4173740
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 4173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 43508742 - 43508653
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 43508653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 48645255 - 48645336
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcc 48645336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 2693373 - 2693230
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||| |||||  ||||||||||||||||| | ||||||  | ||| |||||||| ||||||||||||||||  ||||||||| | | ||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta-aaatgtccat 2693275  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||| |||||||| ||| ||| |||||| |||||||||    
T  2693274 caaaatggtccatccgtccataagttccattagtgatgatgatgt 2693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 20493826 - 20493916
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||  ||||||||||||| ||||| ||||||||| | |||||||||| ||||||||||||||| |||||||||    
T  20493826 tgactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaattt 20493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 4169686 - 4169775
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| |||||| | |||| |||||| ||||||||||| ||||||| | |||||||||||||||    
T  4169686 gactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaattt 4169775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 94 - 183
Target Start/End: Original strand, 20819986 - 20820075
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttt 183  Q
    ||||||||||||| ||||| |||||||||| ||||||| ||||||||  | ||| ||||||||||||||| |||||||||||||||||||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaatttt 20820075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 33266099 - 33266010
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| |||||||||||||||||||||| |||||||||  || ||||| |||||||||||| ||||||| | |||||||||||||||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaattt 33266010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 44794847 - 44794765
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||||||||||||||||| |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||    
T  44794847 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 320990 - 320903
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaa 179  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||| ||| ||| |||||||||| ||||||| | ||||||| ||||    
T  320990 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaa 320903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 2691377 - 2691463
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttt 183  Q
    ||||||||||| ||| | |||||||||| ||||||| | |||||||||||   |||||||||||||||||||||||||||||||||||    
T  2691377 taatacctcaacttcat-cttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttt 2691463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 47941848 - 47941930
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    ||||||||||||||| || |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||    
T  47941848 tcggtcaaattcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  98 atacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||| ||||||||||||| ||||||| ||||| |||||   |||||||||| ||||||| | |||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 833221 - 833312
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||| | | ||||||| |  ||||||||||||||    
T  833221 ttgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 833312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 42982543 - 42982452
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||| | |||||  | |||||||||| ||||||| |||||||||||||||||||||||| |||||  ||||| |||| |||||||    
T  42982543 ttgactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaattt 42982452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 5439737 - 5439647
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||| | | ||||||| |  ||||||||||||||    
T  5439737 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5439647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 11254118 - 11254208
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| |||||||||||||||| |||||||||| ||||||||| ||||| |||| || |||||||| ||||| || ||| |||| |||||||    
T  11254118 tgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaattt 11254208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 44558580 - 44558494
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| ||||||| ||||| |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||| |||||||||    
T  44558580 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccttccgtccaa 44558494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 5437810 - 5437900
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| |||||||||  || |||||||||||||| | | ||||||| |  ||||||||||||||    
T  5437810 tgactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 5437900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 10372793 - 10372711
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| |||||| |||||| |||| ||| ||||||| ||||  |||||||||||  |||||||||||||||| |||||||||||    
T  10372793 tcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 835132 - 835012
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||| | || |||||||||| ||||||||  ||| || ||||||||||| | | ||||||| |  ||||||||||||||   | ||||    
T  835132 tgactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgt 835033  T
Q  192 ccatcaaaatggtccctccgt 212  Q
    | |||||| | ||||||||||    
T  835032 caatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 7149542 - 7149662
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    |||||| | |||||| | |||||||||| ||||||| | | ||||| ||  | |||||||| |||||| |||||  ||| ||||||| ||| | ||| ||    
T  7149542 taatacataaaattcatccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttatttcatccttgaatttaacataggtcaat 7149641  T
Q  196 caaaatggtccctccgtccaa 216  Q
    |||||||||||||||||||||    
T  7149642 caaaatggtccctccgtccaa 7149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 13451062 - 13450970
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgtta 227  Q
    ||||||||||||  |||||  | ||||||| |  |||||| |||||||  |||||||||||||||||||||||||| |||||| |||| ||||    
T  13451062 caaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaaatggtccctccatccaaatgctctgtta 13450970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 39083676 - 39083776
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||| |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  39083676 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T
Q  230 g 230  Q
    |    
T  39083776 g 39083776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 2827452 - 2827527
Alignment:
Q  141 cgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    ||||||| |||| ||  ||||||| | ||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  2827452 cgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 2827527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 44972489 - 44972548
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||| ||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  44972489 gtccctaaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 44972548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 10762618 - 10762700
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| |||||| |||||| |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |||||||||||    
T  10762618 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 10762700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 51042044 - 51041932
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| ||| |||||| | |  |||||||||||| ||||| |||| ||  ||||||| | ||||||| |||||||  ||||||| |||||||| |    
T  51042044 tcaaattcgtccttaaatttttacaggtcggtcaaattcatccctcaattatgtgaaatatcaacttagtccatgaatttgtcagacgt-catcaaaaag 51041946  T
Q  203 gtccctccgtccaa 216  Q
    |||||||| |||||    
T  51041945 gtccctccatccaa 51041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 5484577 - 5484677
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T
Q  230 g 230  Q
    |    
T  5484677 g 5484677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 39921531 - 39921631
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  39921531 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T
Q  230 g 230  Q
    |    
T  39921631 g 39921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 43779954 - 43779854
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  43779954 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T
Q  230 g 230  Q
    |    
T  43779854 g 43779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 27624845 - 27624918
Alignment:
Q  132 ggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtc 205  Q
    |||||||||| ||  | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||    
T  27624845 ggtcaaattcatctttcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtc 27624918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 34460261 - 34460314
Alignment:
Q  129 atcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| || |||| ||||||||||| ||||| ||||| |||||    
T  34460261 atcggtcaaattcgtctcttaattatgcaaaatatcaatttaatccctaaattt 34460314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 39189419 - 39189516
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgtta 227  Q
    |||| ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||    
T  39189419 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 54387958 - 54387890
Alignment:
Q  105 aaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||| ||| |||||| ||||||| | |||||| || ||| |||||||| |||||||||||||||||    
T  54387958 aaattcgtccttaaatttttaaaaatcagccaaattagttcct-aattttgcgaaatatctatttagtcc 54387890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 32652136 - 32652236
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||  |||||  | ||||||| |  |||||| |||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T
Q  230 g 230  Q
    |    
T  32652236 g 32652236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 44792971 - 44793023
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  44792971 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 44793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 44994374 - 44994274
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | |||||||| |||||||| |||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T
Q  230 g 230  Q
    |    
T  44994274 g 44994274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 47942800 - 47942748
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| |||| ||| ||||||| ||||| ||| |||||||    
T  47942800 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaattt 47942748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 223
Target Start/End: Original strand, 50131240 - 50131292
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctcc 223  Q
    |||||||||||| ||| |||||||||||||| |||  |||||||||| |||||    
T  50131240 gtccctgaatttgacaaacgtccatcaaaatagtcattccgtccaaatgctcc 50131292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 8e-73; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 8609933 - 8609787
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8609933 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 8609834  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8609833 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 91 - 240
Target Start/End: Complemental strand, 26242460 - 26242311
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||| ||||||||||| |||||||||||||||| ||||||| | ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||    
T  26242460 ttgattaatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacg 26242361  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26242360 tccatcaaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||| |||| ||| ||||||||||||||||| || |||||| ||||||||||||||  |||||||||||||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 240
Target Start/End: Complemental strand, 13486245 - 13486096
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    ||||||||||||||||||| || |||||||||| |||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  13486245 ttgactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacg 13486146  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  13486145 tccatcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 38547227 - 38547372
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||| |||||||||| ||||||| | ||||||||||||||||||||||||    
T  38547227 tgactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgt 38547326  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  38547327 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 22272334 - 22272483
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaa--tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    ||||||||||||||||||||  |||||||||||||||  || ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||    
T  22272334 gactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacg 22272433  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  22272434 tccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 240
Target Start/End: Complemental strand, 41825790 - 41825641
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||| ||||||||||||||||| |||||||||| |||||||    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  41825790 ttgattaatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacg 41825691  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  41825690 tccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 7745256 - 7745109
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||| |||||||||||  ||||||||| ||||||| | |||||||||| ||||||||||| |||||| ||||||||||||| ||||||||||| ||    
T  7745256 gactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatc 7745157  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  7745156 catcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 5036446 - 5036596
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 193  Q
    ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  194 atcaaaatggtccctccgtcca----aaagctccgttagtggtgatgatgt 240  Q
    |||||||||||| |||||||||    ||||||| ||||||| |||||||||    
T  5036546 atcaaaatggtctctccgtccaaattaaagctctgttagtgatgatgatgt 5036596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 27691154 - 27691301
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||||||||||||||||| ||||| | | ||||||||||    
T  27691254 catcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgt 27691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 136 - 240
Target Start/End: Complemental strand, 9673266 - 9673162
Alignment:
Q  136 aaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgat 235  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  9673266 aaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgat 9673167  T
Q  236 gatgt 240  Q
    |||||    
T  9673166 gatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 33708947 - 33708801
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||| | |||||||||||||||| ||||||| |||||||||||||||||| ||||||  | ||||||||||||||||||| |||||    
T  33708947 gactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtc 33708849  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||||||||||||||||| ||||||| | ||||||||||    
T  33708848 catcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 42943515 - 42943426
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 42943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 5038155 - 5038062
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  5038155 tttttgactaatacctcaaattcgt-cttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaattt 5038062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 22273980 - 22273891
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| || |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaattt 22273891  T

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Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 34681160 - 34681074
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  34681160 ttttggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

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Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 27692926 - 27692837
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||||||||||| | |||||||||||||||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaattt 27692837  T

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Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 35509212 - 35509303
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  35509212 ttgactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35509303  T

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Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 29237150 - 29237240
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  29237150 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

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Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 40339759 - 40339677
Alignment:
Q  158 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||    
T  40339759 aaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

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Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 26238726 - 26238807
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcc 26238807  T

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Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 33707207 - 33707295
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33707295  T

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Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 13106799 - 13106893
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| |||||||| |||||||||| ||||||||| ||| ||| |||||||||||||| ||||||| | |||||||||||||||    
T  13106799 tttttgactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 33762803 - 33762713
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  33762803 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 33762713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 38548921 - 38548831
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  38548921 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 38548831  T

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Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 601793 - 601704
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 601704  T

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Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 35510908 - 35510819
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||||  ||||||| | |||||||||||||||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaattt 35510819  T

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Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 8608237 - 8608327
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctg-aattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||    
T  8608237 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattt 8608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 15305818 - 15305944
Alignment:
Q  114 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    |||||||||| |||||| |||||| || ||||||||||| |   ||||||| | ||||||||||||||||||||||||||||||||   |||||||||||    
T  15305818 cttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 15305917  T
Q  214 caaaagctccgttagtggtgatgatgt 240  Q
    |||||  |||||||   ||||||||||    
T  15305918 caaaatatccgttaacagtgatgatgt 15305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 15486187 - 15486313
Alignment:
Q  114 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    |||||||||| |||||| |||||| || ||||||||||| |   ||||||| | ||||||||||||||||||||||||||||||||   |||||||||||    
T  15486187 cttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 15486286  T
Q  214 caaaagctccgttagtggtgatgatgt 240  Q
    |||||  |||||||   ||||||||||    
T  15486287 caaaatatccgttaacagtgatgatgt 15486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 33761068 - 33761158
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||  ||||||||| ||||||| | ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  33761068 tgactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 33761158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 29239276 - 29239187
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| ||||||||| |||||| | ||||||| | |||||||||||||||    
T  29239276 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 27407041 - 27406894
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||| | || |||||||||| |||||| || ||| ||||||| |||||| | | ||||||  |  ||||||||||||||||||||||||    
T  27407041 gactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtc 27406942  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||| ||||||||||||  |||||||   ||||||||||    
T  27406941 catcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgt 27406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 43262231 - 43262145
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||| |  ||||||| |||| |||||||| |||||||||||||||||    
T  43262231 tttttgactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcc 43262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 31821428 - 31821541
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| | |||||||| | |  |||||||| ||||||||| |||| ||| ||||||| | |||||||| ||||||  |||||||||||||||| |    
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  203 gtccctccgtccaa 216  Q
    ||||||||||||||    
T  31821528 gtccctccgtccaa 31821541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 13284086 - 13283995
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||| ||||||||| |||||||||| ||||||||| ||| || ||||||||||||||| ||||||| | ||||||| |||||||    
T  13284086 ttgattaataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaattt 13283995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 9671980 - 9672066
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| |||||||| |||||||||| |  ||||  |||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  9671980 taataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaattt 9672066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 15308351 - 15308261
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||| | | ||||||| | |||||||||||||||    
T  15308351 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 15488720 - 15488630
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||| | | ||||||| | |||||||||||||||    
T  15488720 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 13484545 - 13484634
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||| ||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||| ||||   ||||| |||| |||||||    
T  13484545 gactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaattt 13484634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 37526137 - 37526024
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||||||||||| | | | |||| ||| ||||||| | |||||||||||||||| ||||| |||||||||| |    
T  37526137 tcaaattcgtccttgaattttcacgcgtcggtcaaattcattcttcaattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaag 37526038  T
Q  203 gtccctccgtccaa 216  Q
    ||||||||||||||    
T  37526037 gtccctccgtccaa 37526024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 41823890 - 41823971
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    ||||||||||| |||||||| |||||||||| ||||||| |  || ||||||| |||||||||| |||||||||||||||||    
T  41823890 gactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcc 41823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 8654537 - 8654634
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||||||| ||| |||| ||| ||||||| ||||| | | |||||||  |||||||||||||||| |||||||||||||||  ||||||||||    
T  8654537 tcggtcaaattcgttcctcaattatgcgaaatatc-atttaattcttgaatttatcagacgtccatcaaaagggtccctccgtccaagtgctccgttag 8654634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| ||||||||||| | |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 41040719 - 41040809
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| ||  ||||||||| |||||||||  ||||||||  ||||||||| ||||||| |||||| |||| |||||||    
T  41040719 tgactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaattt 41040809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 42897861 - 42897775
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| ||||||||||||| |||| ||  ||||||| | ||||||| |||||||  |||||||||||||||| |||||||||||||||    
T  42897861 tcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 42897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 38882911 - 38882786
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |   ||||||||||||| ||| | || | ||| | ||||| ||||| |||||||||||  ||||||||||| ||||      
T  38882911 tcaaattcgtccttgaattttcacggatcggtcaaattcatccttcaactatgcgagatatcaatttaatccctgaatttgtcagacgtccataaaaaat 38882812  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    ||||||||||||||  ||||||||||    
T  38882811 gtccctccgtccaagtgctccgttag 38882786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 33750472 - 33750385
Alignment:
Q  129 atcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    ||||| ||| ||||||||| |||| ||| ||||||| | |||||||||||||||  ||||| | |||||||| |||||||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaa 33750385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 3151969 - 3152046
Alignment:
Q  105 aaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||| || ||||||||| ||||||| || |||||| |||||||| |||| ||||||| ||||||||||||| |||||    
T  3151969 aaatttgtccttgaatttaaaaaaattggccaaatttgtccctgagtttttcaaaatagctatttagtcccttaattt 3152046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 32822371 - 32822484
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||| ||||| |||||||||| |   ||||| ||||||| ||||| |||| |  |||||||| | |||||||||||||||  |||| ||||||||||| |    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaaaag 32822470  T
Q  203 gtccctccgtccaa 216  Q
    |||| |||||||||    
T  32822471 gtccttccgtccaa 32822484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 1320660 - 1320740
Alignment:
Q  136 aaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||||| ||||| |||| ||||||||||| | |||||||||||||||  ||||||||||| || | ||||| |||||||||    
T  1320660 aaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcagacgtccataaataaggtccttccgtccaa 1320740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 9184448 - 9184520
Alignment:
Q  158 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||| | |||||||||||||||  |||||||| ||| |||||||||||||||||||| ||| | ||||||    
T  9184448 aaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtccaaatgcttcattagtg 9184520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 600760 - 600819
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaatt 152  Q
    |||||||||||||||||||| |||||||||| ||||||| | ||| ||||||| ||||||    
T  600760 gactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||| | | ||||||| |  |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 462484 - 462371
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    ||||||||||  ||||||||| | | ||||| ||||||| ||| | |||| ||| ||||||| | ||||||| |||||||  || ||||||||||||| |    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaaag 462385  T
Q  203 gtccctccgtccaa 216  Q
     ||||||| |||||    
T  462384 atccctccatccaa 462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 15562446 - 15562503
Alignment:
Q  115 ttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagt 172  Q
    ||||||||| ||||||| ||||||||||||| | ||||||| |||||||| |||||||    
T  15562446 ttgaatttttaaaaatcagtcaaattcgtccttaaattttgtaaaatatcaatttagt 15562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 37801541 - 37801606
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 233  Q
    ||||||||||||||| ||| ||||| |||||| |||||| |||||||||| | | |||||||||||    
T  37801541 ttagtccctgaatttaacaaacgtcaatcaaattggtccttccgtccaaatggttcgttagtggtg 37801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 44620724 - 44620671
Alignment:
Q  129 atcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||| |||||||  |||||||||||||||| |||| ||||||||||||    
T  44620724 atcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaattt 44620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 15145808 - 15145749
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||||||| ||| ||||| |||||||| |||| |||||||||| |||| |||||||    
T  15145808 gtccctgaatttaacaaacgtcgatcaaaatagtccttccgtccaaatgctctgttagtg 15145749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 230
Target Start/End: Complemental strand, 40020717 - 40020622
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| ||||||||||    
T  40020717 caaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 40020622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 28433830 - 28433704
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||| ||||| | |||||||| ||  ||||| ||||||||||||| |||||  | ||||||| |  ||||||||||||||    |||||||||| |  |     
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  203 gtccctccgtccaaaagctccgttagt 229  Q
    ||||||||||||||||| | |||||||    
T  28433730 gtccctccgtccaaaaggttcgttagt 28433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 1322364 - 1322316
Alignment:
Q  134 tcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||| |||| ||||||||||| ||||| |||||||||||    
T  1322364 tcaacttcgtccctcaattatgcaaaatatcaatttaatccctgaattt 1322316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 9795535 - 9795591
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaa 150  Q
    |||||||||||||||||||| || |||||| |||||||   ||||||| ||||||||    
T  9795535 actaatacctcaaattcgtttttaaattttcaaaaatcaaccaaattcatccctgaa 9795591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 91 - 237
Target Start/End: Original strand, 17574316 - 17574462
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17574316 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 17574415  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17574416 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 88 - 240
Target Start/End: Complemental strand, 36057742 - 36057590
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacag 187  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  36057742 ttttggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacag 36057643  T
Q  188 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36057642 acgtccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 7267843 - 7267987
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 30468404 - 30468260
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||| ||||||||| ||||| ||||||||||||||||| ||||||||||||| || |||||||| ||||||||||||||||| |||||||||||||||||    
T  30468404 gactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtc 30468305  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30468304 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| ||||||||||  ||||| || |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 8539674 - 8539818
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||| |||||||  |||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||    
T  8539674 tgactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgt 8539773  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 236  Q
    |||||||||| ||| |||| ||||||||||||||||||| |||||    
T  8539774 ccatcaaaatagtcgctccatccaaaagctccgttagtgttgatg 8539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 240
Target Start/End: Complemental strand, 18625134 - 18624985
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||| ||||||||||||||||| |||||||||| |   ||| |  ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||    
T  18625134 ttgagtaatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcg 18625035  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  18625034 tccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 2854450 - 2854304
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| | ||| ||| | |||||||||||||||||||||||||    
T  2854450 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtc 2854352  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    || |||| | ||||||||||||||||| ||| ||| | ||||||||||    
T  2854351 caacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 24541337 - 24541188
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||||||||  ||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  24541337 tgactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 24541238  T
Q  192 ccatcaaaatggtc-cctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||| |  || |||||||||||||| ||  ||| | ||||||||||    
T  24541237 ccatcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgt 24541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 12738827 - 12738736
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  12738827 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 12801650 - 12801559
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  12801650 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaattt 12801559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 29621905 - 29621758
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||| | ||  ||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||| ||||||||    
T  29621905 gactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 29621806  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  29621805 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 29621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 8541360 - 8541271
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 8541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 240
Target Start/End: Original strand, 40780539 - 40780697
Alignment:
Q  82 tatttctttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatt 181  Q
    ||||| ||| ||| |||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | ||||||||||||||    
T  40780539 tatttatttatgagtaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatt 40780638  T
Q  182 ttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    || || ||||||||||||   ||||||||||||||||  |||||||   ||||||||||    
T  40780639 ttgcaaacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 40780697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 2852886 - 2852975
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| | ||||| |||||||||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaattt 2852975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 34328916 - 34328827
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaattt 34328827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 42473731 - 42473584
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||| | | ||||||| |  ||||||||||||||||||||||||    
T  42473731 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtc 42473632  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   |||| |||||||||||  |||||||   ||||||||||    
T  42473631 catcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgt 42473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 7269536 - 7269446
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||  |||||||||||||||||||  || |||||||||||||||||| ||||||| | |||||||||||||||    
T  7269536 tgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 28813858 - 28813765
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaa--tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||| ||||||||| ||||||  | || ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  28813858 ttgactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattt 28813765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 21843081 - 21842992
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| | |||||||||||||||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaattt 21842992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 28822176 - 28822090
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| ||||  |||||| |||| |||||||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaattt 28822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 32134229 - 32134320
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| ||  ||||||||| |||||||   ||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  32134229 ttgactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 40782301 - 40782211
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  40782301 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 40782211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttta 184  Q
    |||||||||| ||| |||||| ||||||| | ||| ||| |||||||||||||| |||||||||||||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 17578022 - 17577935
Alignment:
Q  95 ctaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| |||||||||| ||||||||| | | ||| |||||||||||||||||||||| | ||||| | |||||||    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaattt 17577935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 18728689 - 18728603
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| ||| ||||||||| |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| |||||||||||||||    
T  18728689 tcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaa 18728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 32087555 - 32087637
Alignment:
Q  134 tcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| ||||||||| |||| ||| ||||||| | ||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  32087555 tcaacttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtccaa 32087637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 29620138 - 29620227
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||| ||||||||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaattt 29620227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 15459303 - 15459184
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||  ||  ||||| |||| |||||||  |||||  | ||||  |||||| || ||||||||| |||||||||||||||||||    
T  15459303 tcaaattcgtccttgaatttgcaaggatcggacaaaatcgtcccccaatttatcgaaatggctattttgttcctgaatttaacagacgtccatcaaaatg 15459204  T
Q  203 gtccctccgtccaaaagctc 222  Q
    |||||| |||||||| ||||    
T  15459203 gtcccttcgtccaaatgctc 15459184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 35395370 - 35395456
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| ||| ||||||||| |||| ||| ||||||| ||||||| |||||||||   ||||||||||||||| |||||||||||||||    
T  35395370 tcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtccctccgtccaa 35395456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 38178180 - 38178082
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||||| ||||| |||| ||| ||||||| |||||||  ||||||||  |||||||||||||||| ||||||| ||||||   ||||||||||    
T  38178180 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtccatgtgctccgttag 38178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 38205404 - 38205306
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||||| ||||| |||| ||| ||||||| |||||||  ||||||||  |||||||||||||||| ||||||| ||||||   ||||||||||    
T  38205404 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtccatgtgctccgttag 38205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 43318174 - 43318061
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||| |||| || ||||| |||| ||| ||||||| | |||||||||||||||  ||||||||||| |||| |    
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  203 gtccctccgtccaa 216  Q
    ||||||||||||||    
T  43318074 gtccctccgtccaa 43318061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 180
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaat 180  Q
    ||||||||||| ||||| |||||||||| ||||||| | |||||||||||   |||||||  ||||||||||||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 28819391 - 28819434
Alignment:
Q  197 aaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  28819391 aaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 28819434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 35292450 - 35292371
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||| ||| ||||||| | |||||||||||||||  ||||||||||| |||| ||| |||||||||||| ||||||||||    
T  35292450 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggttcctccgtccaaatgctccgttag 35292371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 38596878 - 38596980
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||| ||||||||||||| |||| ||| ||||||| | |||||||||||||||   ||||||||||||||| |    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaaaag 38596977  T
Q  203 gtc 205  Q
    |||    
T  38596978 gtc 38596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 24496778 - 24496867
Alignment:
Q  128 aatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 217  Q
    ||||||||||||| |||||| |||| ||  ||||||| | ||| |||||||||||   |||||| |||||||||||||| ||||||||||    
T  24496778 aatcggtcaaatttgtccctcaattatgtgaaatatcaaattaatccctgaatttgtgagacgttcatcaaaatggtccatccgtccaaa 24496867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 42471548 - 42471607
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaatt 152  Q
    ||||||||||||||| | || |||||||||| ||||||||| ||| ||||||||||||||    
T  42471548 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatt 42471607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 27349212 - 27349281
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaa 218  Q
    |||||||| ||||||| |||| |||| |||||||  |  ||||| |||||||||||||||||||||||||    
T  27349212 aattttgcgaaatatcgattttgtccttgaatttctctcacgtctatcaaaatggtccctccgtccaaaa 27349281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 32835913 - 32835965
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  32835913 tcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 32835965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 27075876 - 27075939
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||||| ||||||||| | ||||| ||||||||| |||||||||||||||| |  |||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaattcatccctccgt 27075939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 38597020 - 38597068
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    ||||||||| |||||  |||||||||||||||| |||||||| ||||||    
T  38597020 ttagtcccttaatttgtcagacgtccatcaaaaaggtccctctgtccaa 38597068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 54898432 - 54898574
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacag 187  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  54898432 tttttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacag 54898531  T
Q  188 acgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||| ||||||||||||| ||||||||||||||||||||||||    
T  54898532 acgttcatcaaaatggtctctccgtccaaaagctccgttagtg 54898574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 27899226 - 27899081
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  27899226 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 27899127  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  27899126 ccataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 51684606 - 51684757
Alignment:
Q  89 ttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacaga 188  Q
    |||||||||||| ||||||||||| |||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  51684606 ttttgactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacaga 51684705  T
Q  189 cgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51684706 cgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 21348722 - 21348870
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  21348722 tgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 21348821  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  21348822 ccatcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  95 ctaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtcca 194  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||| |||||||||||||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  195 tcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 35905835 - 35905712
Alignment:
Q  114 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35905835 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtc 35905736  T
Q  214 caaaagctccgttagtggtgatga 237  Q
    ||||||||||| ||||||||||||    
T  35905735 caaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 88 - 237
Target Start/End: Original strand, 46112482 - 46112631
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacag 187  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||| ||||||||||||    
T  46112482 ttttagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacag 46112581  T
Q  188 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  46112582 acgtccatcaaaatggtccctccgttcaaaagctatgttagtggtgatga 46112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 88 - 240
Target Start/End: Complemental strand, 30600067 - 30599915
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacag 187  Q
    |||| |||||||||||||||||||| ||| |||||| | ||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||    
T  30600067 ttttggactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagag 30599968  T
Q  188 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30599967 acgtcgatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 41977750 - 41977894
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| || ||||||| | |||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    | ||||||||||||||||||||||||||| ||||| |||||||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatga 41977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||||| ||||||||||||  ||||||| | |||||||| || |||||||||| ||||||||||||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    |||||||||||||||||| ||||||||| |||||| |  |||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 42279510 - 42279654
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    |||||||||||||||||  ||||||||| ||||||| |   |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||| | |||||||||| |||||| || ||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 123 - 240
Target Start/End: Original strand, 46197750 - 46197867
Alignment:
Q  123 taaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctc 222  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||| ||    
T  46197750 taaaaactcggtcaaattcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttc 46197849  T
Q  223 cgttagtggtgatgatgt 240  Q
    |||||||| |||||||||    
T  46197850 cgttagtgatgatgatgt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 44794207 - 44794354
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||| |||| |||| ||| ||| |||||||||||||| ||||||| | |||||||||||||||| |||| ||    
T  44794207 tgactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagt 44794305  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||| | ||||||||||||||||| ||||||| | ||||||||||    
T  44794306 ccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 3152362 - 3152215
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||  | ||| |||||| ||||||||| ||| ||| |||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||||||||||||||||| ||||||| | ||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 99 - 219
Target Start/End: Original strand, 2660218 - 2660338
Alignment:
Q  99 tacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaa 198  Q
    |||||||||||||| |||||||||| ||||||||  ||| |||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  199 aatggtccctccgtccaaaag 219  Q
    | | |||||||||||||||||    
T  2660318 attcgtccctccgtccaaaag 2660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 2379071 - 2378983
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaattt 2378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 23291570 - 23291659
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattt 23291659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 48830885 - 48830803
Alignment:
Q  158 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48830885 aaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 3150252 - 3150341
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 3150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 53187740 - 53187831
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  53187740 ttgactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 30598336 - 30598426
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||| |||| |||||||    
T  30598336 tgactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaattt 30598426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 53094363 - 53094273
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  53094363 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 53094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 611311 - 611222
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||| | ||||| |||||||| ||||||||||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaattt 611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 38193599 - 38193510
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 41979441 - 41979352
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 44276266 - 44276193
Alignment:
Q  167 tttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44276266 tttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 46308807 - 46308896
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 46310525 - 46310436
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  46310525 gactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46310436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 46609147 - 46609238
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||||||||||||  ||||||| | |||||||||||||||    
T  46609147 ttgactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattt 46609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 600722 - 600853
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagac 189  Q
    ||||||||||||||||||||| | |||||||||||||||||||  |||||| || | |||||||| |||||||||||||||||                |    
T  600722 tttgactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagt----------------c 600805  T
Q  190 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  600806 gtccatcaaaatggtccctccgtctaaaagctccgttagtggtgatga 600853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 19987697 - 19987591
Alignment:
Q  134 tcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 233  Q
    |||| |||||||||||||||||| ||||||| | ||||||||| ||||||||| ||||||||||||   ||||||||||||||||| || |||||| |||    
T  19987697 tcaatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtg 19987598  T
Q  234 atgatgt 240  Q
    |||||||    
T  19987597 atgatgt 19987591  T

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Target: chr3; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 42282559 - 42282473
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||||  ||||||||||| ||||||||||||||||| |||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaattt 42282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 46611392 - 46611303
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||  ||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46611303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 48633887 - 48634012
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||||||||||||||| | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| |    
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    ||||||||||||||  ||||||||||    
T  48633987 gtccctccgtccaagtgctccgttag 48634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 54900163 - 54900074
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | || ||||||||||||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaattt 54900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 44267980 - 44268070
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||| || ||||||||||| ||||| |||||| |||| |||||||    
T  44267980 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaattt 44268070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 54412633 - 54412547
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||| ||||||||||| | ||||||||||||||| |||||||||||||| |||||||||| | ||||||||||||| |||||||||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaattt 54412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 35903825 - 35903914
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| || |||||||||| ||||||| | ||| ||| |||||||||||||||||||||| | |||||||||||||||    
T  35903825 gactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 38191895 - 38191984
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| ||| |||||| |||||| || ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 38191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 27897148 - 27897239
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||| |||||||||| || || |||||||||| ||||||||    
T  27897148 tttgactaatacctcaaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgc-aattagctatttagtctctgaattt 27897239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |  | |||| ||||||||||||| |||| ||| ||||||| |||||||||||||||||  ||||||||||||||||      
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  203 gtccctc 209  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaatttt 154  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| |||||||||  || ||||| |||||||||||| ||||||| | ||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 51686483 - 51686402
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||||||||||| ||| |||||| ||||||| | ||||||||||||| |||||||| |||||| ||||||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcc 51686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 45257334 - 45257208
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    ||||||||||||||||||||| |    |||| ||||||| ||||| |||| || |||||||| | ||||| |||||||||  ||||||||||| ||||      
T  45257334 tcaaattcgttcttgaattttcacgggtcggccaaattcatccctcaattatgtaaaatatcaacttagttcctgaatttgtcagacgtccataaaaaat 45257235  T
Q  203 gtccctccgtccaaaagctccgttagt 229  Q
    ||||||||||||||  |||||||||||    
T  45257234 gtccctccgtccaagtgctccgttagt 45257208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 2977443 - 2977318
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |  |||||| ||||||| ||||| |||| ||| ||||||| ||| ||||||| |||||  || ||||||||||||| |    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaag 2977344  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    |||| |||| ||||  ||||||||||    
T  2977343 gtccatccgcccaagtgctccgttag 2977318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 23888886 - 23888761
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| | |||||||| | |  |||| ||| ||||||||| |||| ||| |||||||   |||||||||||||||  || ||||||||||||| |    
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    |||||||||||||||  |||||||||    
T  23888786 gtccctccgtccaaatcctccgttag 23888761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 28626411 - 28626500
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||| | || |||||||||| ||||||||||||| |||||||||||||| | | ||||||| |  ||||||||||||||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 28626500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 31887566 - 31887441
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |   |||||||||||||  || | |||| ||| ||||||| | |||||||||||||||  |||| ||| ||||||| |    
T  31887566 tcaaattcgtccttgaattttcacggatcggtcaaattcaaccatcaattatgcgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaag 31887467  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    ||||||||||||||  ||||||||||    
T  31887466 gtccctccgtccaagtgctccgttag 31887441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 48829356 - 48829437
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||||||||||| |||||||||| |||| || | ||||||  | |||||||||||| |||||||||||||||||    
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcc 48829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 53092623 - 53092712
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||  || |||||| |||||| || ||| |||||||||||||||||| ||||||| | ||| |||||||||||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaattt 53092712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 182
Target Start/End: Complemental strand, 2661992 - 2661908
Alignment:
Q  98 atacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||| |||||||||| ||||||||  ||| ||||||| |||||||||| ||||||| | ||||||| |||||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaattt 2661908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 35572617 - 35572525
Alignment:
Q  89 ttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatt 181  Q
    |||||| |||||| | |||||||| ||||||||||||||||| | | ||||| || ||||||||||| |||||| ||||||||||| ||||||    
T  35572617 ttttgattaatactttaaattcgtccttgaattttaaaaaattgattaaatttgttcctgaattttgaaaaatagctatttagtccttgaatt 35572525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 17517052 - 17516973
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||| |||||||||| ||||||||||||||||||| | |||||||||| |||||  ||||| |||| |||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaattt 17516973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 238
Target Start/End: Complemental strand, 40509025 - 40508890
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||| ||||||||||||| |||| ||| ||||||| | ||| ||| |||||||  ||||||||||||||||      
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  203 gtccctccgtccaaaagctccgttagtggtgatgat 238  Q
    ||||||||||||||  | ||||||||| ||| ||||    
T  40508925 gtccctccgtccaagtgttccgttagtcgtgctgat 40508890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 46114196 - 46114105
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaa-tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||| |||||||||||  | |||||||||||||||| |||| |||||| |||| |||||||||| ||||||||||||||||  |||||||    
T  46114196 tgactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaattt 46114105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 7883328 - 7883417
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||| |||||  ||||||||| ||||||||| ||| ||||||||| |||||||  ||||||| | ||||| |||||||||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaattt 7883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 18430385 - 18430260
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| ||||||||||||    || | ||||||| ||||| |||| ||| ||||||| | ||||||||||||| |  ||||||||||  |||| |    
T  18430385 tcaaattcgtccttgaattttaacgggtcagccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatatgtcagacgtccaataaaaag 18430286  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    ||||||||||||||  ||||||||||    
T  18430285 gtccctccgtccaagtgctccgttag 18430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 1845840 - 1845918
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgtta 227  Q
    |||| ||||||||||| | ||||||  ||||||| |||||||||||||||||  ||||||||||||||  |||||||||    
T  1845840 aattatgcaaaatatcaacttagtctttgaatttgacagacgtccatcaaaaacgtccctccgtccaagtgctccgtta 1845918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 45898423 - 45898349
Alignment:
Q  142 gtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    ||||||||||| ||| ||||||| | ||||||| |||||||  |||||||| ||||||| |||||||||||||||    
T  45898423 gtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaaggtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 5133068 - 5133133
Alignment:
Q  165 tatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||| |||| ||||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  5133068 tattttgtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 5133133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 21350694 - 21350605
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| | | ||| ||||  |||||||| |||||||||  ||||||||||| ||||| |||||| |||| |||||||    
T  21350694 gactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaattt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 33852755 - 33852659
Alignment:
Q  132 ggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||  ||||| |||| ||| ||||||| ||||| |  ||||||||  |||||||||||||||| |||||||| ||||||  ||||||||||    
T  33852755 ggtcaaatttatccctcaattatgcgaaatatcaatttaatttctgaatttatcagacgtccatcaaaaaggtccctctgtccaagtgctccgttag 33852659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 213
Target Start/End: Complemental strand, 33113267 - 33113184
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    |||| |||| || ||||| |||| ||| ||||||| | ||||||||| |||||  |||||||||||||||| ||||||||||||    
T  33113267 tcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 41021090 - 41021008
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| |||||| |||||| |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |||||||||||    
T  41021090 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 41021008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 48635428 - 48635375
Alignment:
Q  129 atcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  48635428 atcggtcaaattcgtcccttaattatgcgaaatatcaatttaatccctgaattt 48635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 54092764 - 54092821
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||| |||| |||||    
T  54092764 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctctgttag 54092821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 43767095 - 43767047
Alignment:
Q  134 tcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| |||||||||||||||||||| |||||| |||| |||||||    
T  43767095 tcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 43767047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 25535333 - 25535250
Alignment:
Q  133 gtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||||||||| |||  |||||| | ||||||  | ||||||||||||||| ||||||||||| |||| |  |||||||||||||    
T  25535333 gtcaaattcgccccccaatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtccaa 25535250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 33051514 - 33051467
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| |||||||| |||||||||||||||| |||| ||||||||||||    
T  33051514 caaaatcgtccctaaattttgcaaaatatcaatttcgtccctgaattt 33051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 5125884 - 5125938
Alignment:
Q  176 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||| ||| |||||||||||||| |||| || ||||||| ||||||||||||    
T  5125884 tgaatttaacaaacgtccatcaaaatagtccttcggtccaaatgctccgttagtg 5125938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 24382952 - 24382894
Alignment:
Q  158 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    ||||||| | ||||||| || ||||  |||||||||||||||| |||||||||||||||    
T  24382952 aaatatcaacttagtccatggatttgtcagacgtccatcaaaaaggtccctccgtccaa 24382894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 41623735 - 41623789
Alignment:
Q  176 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||| ||| |||||||||||||| |||| ||||| |||| ||||||||||||    
T  41623735 tgaatttaacaaacgtccatcaaaatagtccttccgttcaaatgctccgttagtg 41623789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 1847699 - 1847647
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||| ||||| |||| ||||||||||| ||||| |||||||||||    
T  1847699 tcggccaaattcatccctcaattatgcaaaatatcaatttaatccctgaattt 1847647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 23877037 - 23876965
Alignment:
Q  158 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||| | |||||| |||||||| ||| |||||||||||| |  |||||||||||||   |||||||||||    
T  23877037 aaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtccaatccctccgttagtg 23876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 33111878 - 33111930
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||| ||||| |||| ||| ||||||| ||||| |||||||||||    
T  33111878 tcggtcaaattcatccctcaattatgcgaaatatcaatttaatccctgaattt 33111930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 39664893 - 39664745
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  39664893 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgt 39664794  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39664793 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 16763075 - 16763220
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16763075 tgactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 16763174  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||    
T  16763175 ccatcaaaatggtccctccgtccaaaatctctgttagtggcgatga 16763220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 44709891 - 44709744
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  44709891 ttgactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacg 44709792  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  44709791 tccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 2766933 - 2767081
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  2766933 tgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 2767032  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  2767033 ctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaa-tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    || |||||||||||||||||||||||||||||||||||||||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 40560221 - 40560370
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    ||||||||||| ||||||||||  ||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40560221 ttgactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 40560320  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||| ||||||||||||||||| || |||||||||||||||||    
T  40560321 tccatcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 17696209 - 17696353
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  97 aatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaatttt-gcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    |||||||||||||||| ||||||||||||||||| | ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 14389229 - 14389081
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||||||||  ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| || | ||    
T  14389229 tgactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgt 14389130  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  14389129 ccatcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 39455168 - 39455316
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||| |||||||| || ||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||| ||||||||||||||||    
T  39455168 tgactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgt 39455267  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||    
T  39455268 ccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 16377305 - 16377197
Alignment:
Q  129 atcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16377305 atcggtcaaatttgtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttag 16377206  T
Q  229 tggtgatga 237  Q
    |||||||||    
T  16377205 tggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 6797507 - 6797654
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||| |||||| |  |||||||||||||||| ||  |||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  6797507 gactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtc 6797606  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
     ||||||||||| ||||||||||||||||| ||||  |||||||||||    
T  6797607 tatcaaaatggttcctccgtccaaaagctctgttacgggtgatgatgt 6797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 39663149 - 39663243
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39663149 ttttggactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaattt 39663243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 16376733 - 16376825
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  16376733 tttgactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaattt 16376825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 37020507 - 37020655
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||| | || |||||||||| ||||||||||||| || |||| ||||||||   ||||||| | |||||||||||||||| |||||||    
T  37020507 tgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgt 37020606  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  37020607 ccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 37020655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 19906685 - 19906764
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccc 175  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccc 19906764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||| |  | |||||||||| ||||||||| ||| |||||||||||||| | | ||||||| | |||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  193 catcaaaatggtccctccgtccaaaa 218  Q
    |||||||   ||||||||||||||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 6786126 - 6786000
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| ||||||||| |||| |   ||||||| | ||||||||||||||||||||||||    
T  6786126 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgt 6786027  T
Q  192 ccatcaaaatggtccctccgtccaaaa 218  Q
    ||||||||   ||||||||||||||||    
T  6786026 ccatcaaatcagtccctccgtccaaaa 6786000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 39456869 - 39456780
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||| |||||||| | ||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||||||||||||||||    
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaattt 39456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 37645490 - 37645634
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||| ||| ||||| |||||||||| ||||||| ||| ||||||||| | ||||||   ||||||||||||||||| |||||||| |||| ||  ||    
T  37645490 taataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttat 37645589  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||| ||||||||||||| |||||| |||| || |||||||||    
T  37645590 caaaattgtccctccgtccataagctctgttattgatgatgatgt 37645634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 16764702 - 16764611
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||| |||||||||| | ||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  16764702 ttgactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 16764611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 6783363 - 6783453
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||||||||||||||||| |||||||||||||| | ||||||||| | |||||||||||||||    
T  6783363 tgactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 14387344 - 14387438
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  14387344 ttttagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 14387438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 19581414 - 19581520
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| ||| |||||| ||||||| | |||||| ||||||||||||||| |||||||||||||||||  ||||||  || | |||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtc 19581513  T
Q  193 catcaaa 199  Q
    |||||||    
T  19581514 catcaaa 19581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 34400314 - 34400403
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| | |||||||||| ||||||||| ||||||| |||||||||||||| ||||| |||||| |||| |||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaattt 34400403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 31475174 - 31475079
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttt 183  Q
    ||||||| ||||||||||| ||||||||| |||||| ||||||| |||||||||||| |  |||||||  ||||||||||||| ||||||||||||    
T  31475174 tttttgagtaatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaatttt 31475079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 6799494 - 6799408
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||| ||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||| ||||| |||||| |||| |||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaattt 6799408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 230
Target Start/End: Original strand, 17946141 - 17946231
Alignment:
Q  140 tcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||| | |||||||||||||||| |||| ||||||||||||  |  | |||||||||||||||||||||||||||||| ||||||||||    
T  17946141 tcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 17946231  T

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Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 24205598 - 24205687
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  24205598 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 24205687  T

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Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 25619670 - 25619795
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||||||||||| ||||| |||| ||||||||||| | |||||||||||||||  || | ||||||||||| |    
T  25619670 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatcaaaaag 25619769  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    |||||||| |||||  ||||||||||    
T  25619770 gtccctccatccaagtgctccgttag 25619795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 37646564 - 37646477
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttt 183  Q
    ||||||| ||| |||||||||||| ||| ||||||| |||||||||||||   |||| ||| ||||||||||||||||||||||||||    
T  37646564 taataccccaacttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaatttt 37646477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 15372536 - 15372618
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| |||||||| |||| |||| ||||||||||| ||||| |||||||||||  |||||||||||||||| |||||||||||    
T  15372536 tcggccaaattcgcccctcaattatgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 15372618  T

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Target: chr2; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 37022275 - 37022185
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||  ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  37022275 tgactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 37022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 37417310 - 37417408
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||| ||||||| ||||| |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||||| |||||||  ||||||||||    
T  37417310 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaagtgctccgttag 37417408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 40561967 - 40561878
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||  ||||||||| ||||||||| ||| |||||| ||||||||||  ||||| | | |||||||||||||||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaattt 40561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 2577570 - 2577480
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||  ||| ||||||||||||||||   ||||||| | |||||||||||||||    
T  2577570 tgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaattt 2577480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 29909735 - 29909661
Alignment:
Q  142 gtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||||| |||| ||| ||||||| ||||||||||| |||||  |||||||||||||||| |||||||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtccaa 29909661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 41706576 - 41706658
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||||||||||||||||| |||| ||| ||||||| ||||| |||||||||||  |  ||||||||||||| |||||||||||    
T  41706576 tcggtcaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcgaacgtccatcaaaaaggtccctccgt 41706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 7744099 - 7744180
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||| ||||||| |||| ||||||||||||  |  | ||||||||||||||||||||| |||||||| ||||||||||    
T  7744099 aattttgcgaaatatcaatttcgtccctgaatttctctcatgtccatcaaaatggtccctccatccaaaaggtccgttagtg 7744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 162165 - 162074
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttt 183  Q
    |||| |||||| |||| ||||| |||||||||| ||||||| |||||||||| |||  |||||| ||||||||||||||||| | ||||||||    
T  162165 ttgagtaatacttcaatttcgt-cttgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaatttt 162074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 39593 - 39679
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||  ||| |||| || |||| |||||||||||||||    
T  39593 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcaggcgtcgattaaaaaggtccctccgtccaa 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 11315449 - 11315335
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||| ||||| ||| |||||| |  |||||| ||||||||| ||  |||||  | ||||||| |  |||| |||||||||  ||||||||||||||||||    
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  203 gtccctccgtccaaa 217  Q
    |||||||||||||||    
T  11315349 gtccctccgtccaaa 11315335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 15432365 - 15432435
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaa 200  Q
    |||||||||||| ||||| |||| ||| ||||||| |||||||| ||||||||  ||||||||||||||||    
T  15432365 tcggtcaaattcatccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaa 15432435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 42517553 - 42517598
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcgg 133  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||    
T  42517553 tttttgactaatacctcaaattcgtccttgaatttttaaaaatcgg 42517598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 62866 - 62807
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||| |||||| |||||    
T  62866 gtccctgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgctagtg 62807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 42879393 - 42879491
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||||||||||| ||||| |||| ||| ||| ||| | ||||||  |||||||  |||||||||||||||| |||||||||||||||  | |||||||||    
T  42879393 tcggtcaaattcatcccttaattatgcgaaa-atcaacttagtctatgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgttccgttagt 42879491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 205
Target Start/End: Complemental strand, 10716995 - 10716893
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||| ||||||| |||||||  |  |||| ||||||||||||||  |||||  ||||||||| |  |||||| | |||||| ||||||||||||||||||    
T  10716995 tcaatttcgttcatgaatttgtacgaatctgtcaaattcgtcccataatttaacaaaatatcaaaatagtccttaaatttttcagacgtccatcaaaatg 10716896  T
Q  203 gtc 205  Q
    |||    
T  10716895 gtc 10716893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 15807968 - 15807903
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 233  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  15807968 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 15807903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 32608116 - 32608051
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 233  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  32608116 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 32608051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 26584899 - 26584819
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtcca 215  Q
    ||||||||||||| || ||| ||||||||| | ||| ||||| ||||| | |||||||||||||| |  ||||||||||||    
T  26584899 caaattcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtcca 26584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 39465 - 39398
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| ||| ||||||| | |||||||||||||||  ||||||| |||||||| |||||| ||||||||    
T  39465 aattatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaa 39398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 13999890 - 13999944
Alignment:
Q  176 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||| ||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  13999890 tgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccattagtg 13999944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 41196 - 41144
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  41196 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 11023100 - 11023000
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||    ||||||||||||||||| |||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T
Q  230 g 230  Q
    |    
T  11023000 g 11023000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 41708484 - 41708432
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  41708484 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 41708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 25278494 - 25278348
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| |||    
T  25278494 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacg 25278395  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25278394 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 6818803 - 6818658
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  6818803 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgt 6818704  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6818703 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 90 - 240
Target Start/End: Original strand, 27087280 - 27087430
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagac 189  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  27087280 tttgactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaac 27087379  T
Q  190 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||    
T  27087380 gtccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 34778270 - 34778118
Alignment:
Q  85 ttctttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttta 184  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||| | |||||||||||||||||    
T  34778270 ttcttttagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaatttta 34778171  T
Q  185 cagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34778170 cagatgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 37344342 - 37344486
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||  ||||||||||| |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 4856092 - 4855946
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  4856092 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4855993  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  4855992 tccatcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 31238621 - 31238475
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31238621 ttgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 31238522  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||| || |||||||||||||||||||||||||||    
T  31238521 tccatcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 93 - 236
Target Start/End: Complemental strand, 50556221 - 50556078
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||| |||||||||||  ||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  50556221 gactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtc 50556122  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatg 236  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  50556121 tatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 240
Target Start/End: Complemental strand, 51896280 - 51896129
Alignment:
Q  89 ttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacaga 188  Q
    |||||||| ||||||||||| ||| ||| |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  51896280 ttttgactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaga 51896181  T
Q  189 cgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
     |||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  51896180 tgtccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 3013601 - 3013447
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  3013601 tgactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgt 3013502  T
Q  192 c------catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |      ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3013501 ccatggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 46583681 - 46583533
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  46583681 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 46583582  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  46583581 ccatcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 33602765 - 33602621
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||  ||||||| | |||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||| | ||||||||||||||||| |||||||||  |||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 15104483 - 15104588
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtga 234  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  15104483 caaattcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtga 15104582  T
Q  235 tgatgt 240  Q
    ||||||    
T  15104583 tgatgt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 52643736 - 52643597
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||||||||| ||| |||||| ||||||| || ||||||||||||||||||||| |||||| |||||||||||||||||||| | |||||       
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttataaacgtc--- 52643640  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
      | |||||| ||||||||||||||||||||||||||||||||||    
T  52643639 --agatggtctctccgtccaaaagctccgttagtggtgatgatgt 52643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 31236815 - 31236908
Alignment:
Q  89 ttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  31236815 ttttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaattt 31236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 25279078 - 25278975
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| |||||||||| ||||||| | ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  25279078 tgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgt 25278979  T
Q  192 ccat 195  Q
    ||||    
T  25278978 ccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 240
Target Start/End: Complemental strand, 9121797 - 9121645
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacag 187  Q
    |||| ||||||||||||||| | || |||||||||| ||||||||| ||| ||||||||| |||||| | ||||||| | |||||||||||||||| |||    
T  9121797 ttttagactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcag 9121698  T
Q  188 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  9121697 acgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 9121645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 50554164 - 50554252
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaattt 50554252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 26223584 - 26223676
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  26223584 tttgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 6816854 - 6816933
Alignment:
Q  82 tatttctttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 161  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6816854 tatttattttttactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 6816933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 47013206 - 47013059
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||| || |||||    
T  47013206 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtc 47013107  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||||||||||||||||  |||||||   ||||||||||    
T  47013106 catcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 47013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 3011858 - 3011944
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaattt 3011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 51894570 - 51894656
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| |||||| ||||||||||||||||||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaattt 51894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 8169657 - 8169568
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||| ||||||||| | |||||||||||||||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaattt 8169568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 25276737 - 25276831
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| ||| ||| ||| |||||||||| ||||||| | |||||||||||||||    
T  25276737 tttttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaattt 25276831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 25278852 - 25278934
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtc 173  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  25278852 ttgactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 46582010 - 46582099
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| || |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 46582099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 52641888 - 52641969
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||||||| |||||| ||||||||||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcc 52641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 8167942 - 8168029
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaat 180  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| |||||| ||||||||||| ||||||| | |||||||||||||    
T  8167942 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaat 8168029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 9120037 - 9120128
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||| | || |||||||||| ||||||||||||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  9120037 ttgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 9120128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 37088226 - 37088144
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||| ||||    
T  37088226 tgactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtcc 37088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 4854410 - 4854499
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||| ||| | |||||||||||||||    
T  4854410 gactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 37346051 - 37345962
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||  ||| ||| |||||||||||||| ||||||| | |||||||||||||||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 37345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 45044946 - 45045009
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattt 153  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  45044946 tttgactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 2871165 - 2871076
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||||||||| ||||| |||||| |||  |||||||    
T  2871165 gactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaattt 2871076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 42134492 - 42134617
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||| |||| || ||||| |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| |    
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    ||||||||||||||  ||||||||||    
T  42134592 gtccctccgtccaagtgctccgttag 42134617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 51121961 - 51122042
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||||||||||| |||| ||||||||||||  |  |||||||||||||||||||||||||||||||| || |||||||    
T  51121961 aattttgcaaaatatcaatttcgtccctgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtctgttagtg 51122042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 33599187 - 33599255
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 161  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||| |||||    
T  33599187 gactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttgaaaaat 33599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 27089370 - 27089279
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||| |||||||||| |||||||||  || ||||||| |||||||||  ||||||| | ||| |||||||||||    
T  27089370 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaattt 27089279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 33599229 - 33599307
Alignment:
Q  104 caaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||| | ||| || ||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaattt 33599307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 36895597 - 36895499
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||| ||||||| | |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||||| |||||||  ||||||||||    
T  36895597 tcggtcaacttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaagtgctccgttag 36895499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 1444270 - 1444181
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||| | || ||| |||||| ||||||||| ||| || ||||||||||||| ||||||||| | |||||||||||||||    
T  1444270 gactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaattt 1444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 47011456 - 47011545
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||| | || |||||||||| ||||||||| ||| ||||||| |||||||| | ||||||| | |||||||||||||||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaattt 47011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 27940647 - 27940727
Alignment:
Q  132 ggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||||||||||||||| |||| ||| ||||||| ||||| ||| |||||||  |||||||||||||||| |||||||||||    
T  27940647 ggtcaaattcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 31801670 - 31801768
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||| ||||||||| |||| ||| ||||||| | ||||||| | |||||   ||||||||||||||| |||||||||||||||  ||||||||||    
T  31801670 tcggtcaacttcgtccctcaattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaaggtccctccgtccaagtgctccgttag 31801768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 46638921 - 46638796
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||||| |||||||| |    |||| ||| ||| ||||| |||| ||| ||||||| | ||||||| |||||||  |||||||||| ||||| |    
T  46638921 tcaaattcgttcctgaattttcacgcgtcggccaacttcatccctcaattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaag 46638822  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    ||||||||||||||  ||||||||||    
T  46638821 gtccctccgtccaagtgctccgttag 46638796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 45381069 - 45380973
Alignment:
Q  132 ggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||||||| ||||| |||| ||| ||||||| | ||||| | |||||||  |||||||||||||||| ||| |||||||||||  ||||||||||    
T  45381069 ggtcaaattcatccctcaattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaagtgctccgttag 45380973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 1442551 - 1442614
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgca 157  Q
    |||||||||||| | | || |||||||||| ||||||||| ||| |||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattttgca 1442614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 1442594 - 1442668
Alignment:
Q  166 atttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||| ||||||||||||| |||||||||||||||   ||||||||||||||||  |||||||   ||||||||||    
T  1442594 atttcgtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 1442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 213
Target Start/End: Original strand, 44157470 - 44157553
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    |||| ||||||| ||||| |||| ||||||||||| | |||||||||||||||   |||||||||| ||||  |||| ||||||    
T  44157470 tcggccaaattcatccctcaattatgcaaaatatcaacttagtccctgaatttgttagacgtccataaaaaaagtccttccgtc 44157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 44159375 - 44159296
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||| | |||||||| | | ||||||||| ||||||||| |||| ||||||||||| ||||| | |||||||||    
T  44159375 tcaacttcgtccctgaattttcacagatcggtcaatttcgtcccttaattatgcaaaatatcaatttaattcctgaattt 44159296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 18184030 - 18183960
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaa 200  Q
    |||| |||| || ||||| |||| ||| ||||||| | |||||||||||||||  ||||||||||||||||    
T  18184030 tcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaa 18183960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 43868697 - 43868751
Alignment:
Q  176 tgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||| ||| || ||||||||||| |||| |||||||||| ||||||||||||    
T  43868697 tgaatttaacaaacatccatcaaaatagtccttccgtccaaatgctccgttagtg 43868751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 5783440 - 5783501
Alignment:
Q  169 tagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||||||||||    ||||||||||||  | ||||||||||||||||| ||||||||||    
T  5783440 tagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 5783501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 35480057 - 35479976
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    ||||||| ||||| |||| ||| ||||||| | ||| ||  |||||||  |||||||||||||||| ||||| |||||||||    
T  35480057 caaattcatccctcaattatgcgaaatatcaacttaatctatgaatttgtcagacgtccatcaaaaaggtccttccgtccaa 35479976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 51544210 - 51544275
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 233  Q
    ||||||||||||||| ||| | ||| |||||| |||||  |||||||||| | |||||||||||||    
T  51544210 ttagtccctgaatttaacaaatgtcaatcaaattggtcattccgtccaaatggtccgttagtggtg 51544275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 5784921 - 5784869
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  5784921 tcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 5784869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 27952554 - 27952502
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  27952554 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 27952502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 35478124 - 35478176
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| |||||| |||||| |||| ||||||||||| ||||| |||||||||||    
T  35478124 tcggccaaattagtccctcaattatgcaaaatatcaatttaatccctgaattt 35478176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 7e-64; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    | |||||||||||||||||||||||||||||||||||||||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 24228530 - 24228386
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||||| || || ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 34777041 - 34776895
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||| ||||||||||||||||||||| ||||||||||||| || ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||    
T  34777041 ttgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacg 34776942  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  34776941 tccatcaaaatggtccctccgtccaaaaactccgttagtgatgatga 34776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 6602335 - 6602479
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||| ||||||||||  ||||||||||||||||||||  ||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6602335 gactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 6602434  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6602435 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 93 - 237
Target Start/End: Original strand, 45359336 - 45359480
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||| ||||| || | |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  45359336 gactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtc 45359435  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  45359436 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 47386334 - 47386186
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||| |||||| ||||||||| || ||||||||||||||    
T  47386334 tgactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgt 47386235  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||    
T  47386234 ccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 30940549 - 30940402
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| || |||||| | ||||||||||||||||||||||||||||| ||||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 13168142 - 13168267
Alignment:
Q  115 ttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccct---gaattttacagacgtccatcaaaatggtccctccg 211  Q
    ||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||| ||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  212 tccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||    
T  13168242 tccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 240
Target Start/End: Complemental strand, 27666191 - 27666042
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||| ||||||| | ||||||||||||||||||| |||    
T  27666191 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacg 27666092  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||   |||||||||||||||||  |||||| | ||||||||||    
T  27666091 tccatcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 29996638 - 29996494
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtc 29996539  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||| | |||||||| |||||||| ||||||| | |||||||    
T  29996538 catcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 37796302 - 37796170
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    |||||||||||||| || |||||||||| ||||||| | |||||||||||   |||||||| |||||||||||||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  196 caaaatggtccctccgtccaaaagctccgttag 228  Q
    |||||| ||||||||||||| ||||||||||||    
T  37796202 caaaatagtccctccgtccataagctccgttag 37796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 56330 - 56477
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    |||||||||||||||||||| |||||||||| |||||||||  || |||||||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||     |||||||||||||||  || |||||| ||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgt 56477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 91 - 182
Target Start/End: Original strand, 39857643 - 39857734
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  39857643 ttgattaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaattt 39857734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 23904583 - 23904672
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  23904583 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaattt 23904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 20478042 - 20478189
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||| | || |||||||||| ||||||||| ||| ||||| |||||||||| | ||||||| | |||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||||||||||||||||  ||||||| | ||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 20478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 48852415 - 48852324
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgt 48852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 13169773 - 13169683
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13169773 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattt 13169683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 240
Target Start/End: Complemental strand, 35693455 - 35693347
Alignment:
Q  134 tcaaattcgtccctgaattttgcaaaatatctat--ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtgg 231  Q
    |||||||||||| ||||||||||  ||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||    
T  35693455 tcaaattcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtgg 35693356  T
Q  232 tgatgatgt 240  Q
    |||||||||    
T  35693355 tgatgatgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 37113941 - 37114030
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  37113941 gactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaattt 37114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 35403711 - 35403619
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| ||||||| | |||||||||||||||    
T  35403711 tttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 6605488 - 6605397
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||||    
T  6605488 ttgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 48228027 - 48227941
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||||| |||||||||||| ||||||||||||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaattt 48227941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 34774998 - 34775087
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||| | | |||||||||||||||| |||||||||||||||||||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaattt 34775087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 22155938 - 22155847
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||| || ||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  22155938 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22155847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 22211853 - 22211762
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||| || ||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  22211853 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaattt 22211762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 78103 - 78014
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||  ||||||||| ||||||||| ||| |||||||||||||||||||||||||| | || ||||||||||||    
T  78103 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaattt 78014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 230
Target Start/End: Original strand, 13018036 - 13018172
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatat--ctatttagtccctgaattttacagacgtcc 193  Q
    ||||||||||||||| | |||||||||||||||||| | |||||||||||   ||||| || ||||||  ||||||  || |||||||| ||| ||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtcc 13018135  T
Q  194 atcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||||||||||||||||||   |||||||||||    
T  13018136 atcaaaatggtccctccgtccaatcactccgttagtg 13018172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 33038911 - 33038798
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||||||||||| ||||| |||| ||| ||||||| | |||||||||||||||| |||||||||||||||| |    
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  203 gtccctccgtccaa 216  Q
    ||||||||||||||    
T  33038811 gtccctccgtccaa 33038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 24226582 - 24226670
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||| ||||| |||||| |||| |||||||    
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaattt 24226670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 27664433 - 27664519
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||| || |||||||||| ||||||||| ||| || ||||||||||||||||||||||| | |||||||||||||||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaattt 27664519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 35401969 - 35402058
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| ||||||||||| |||||||||| |||||||||  || |||||||||||||||||| ||||||| | |||||||||||||||    
T  35401969 gactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 35402058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 182
Target Start/End: Original strand, 35691431 - 35691516
Alignment:
Q  97 aatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| || |||||||| ||||| |||||| |||| |||||||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaattt 35691516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 45361368 - 45361279
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaa 179  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||| || || ||||||||||||||||||  |||||||||| ||||    
T  45361368 tttgactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaa 45361279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 47384294 - 47384383
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||  | ||||||||||| |||||||||| ||||||||| |||||||| ||||||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaattt 47384383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 20479809 - 20479719
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  20479809 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 20479719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 23906307 - 23906241
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  23906307 gtccctaaattttacagtcgtccatcaaaatggtccctccgtccaaaagctccgttaatggcgatga 23906241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 13039722 - 13039641
Alignment:
Q  102 ctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttt 183  Q
    ||||| ||||| |||||||||| |||||||  |||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaatttt 13039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 46437107 - 46437196
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||| | ||||||||||  |||||||||| ||||| |||||| |||| |||||||    
T  46437107 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaattt 46437196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 216
Target Start/End: Original strand, 2167516 - 2167602
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||||||||||| ||||| |||| ||| ||||||| | |||||||||||||||  |||||| ||||||||| |||||||||||||||    
T  2167516 tcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaa 2167602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 46996789 - 46996691
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||| ||| ||||||||| |||| ||| ||||||| | |||||| ||||||||  |||||||||||||||| |||||||||||||||  ||||||||||    
T  46996789 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctccgttag 46996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 23906356 - 23906295
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaatttt 154  Q
    |||||||||||||||||| | |||||||||||||||||||| ||||||||||||| ||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 29994901 - 29994966
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattt 153  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  29994901 ttttttactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 38549547 - 38549624
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctattta 170  Q
    ||||||||||| |||||||| |||||||||| ||||||| | ||| |||||||||||||||||  |||||||||||||    
T  38549547 gactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctattta 38549624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 23953842 - 23953940
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    ||||| |||||||||| | |||| ||| ||||||| | ||||||| |||||||  |||||||| ||||||| |||||||||||||||  ||||||||||    
T  23953842 tcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaaggtccctccgtccaagtgctccgttag 23953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 1546343 - 1546424
Alignment:
Q  149 aattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||| ||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| ||||||||||    
T  1546343 aattttgcgaaatatcaattgcgtccttgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 1546424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 35344372 - 35344295
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    ||||||||||||| |||| ||| ||||||| ||||| |||||||||||   ||||||||||||||| |||||||||||    
T  35344372 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 37791657 - 37791744
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaatttt 183  Q
    |||||||| || |||||  || |||||||||||||| | ||||||| ||||  |||||||| ||||||||||||||||||| ||||||    
T  37791657 taatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttt 37791744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 46439622 - 46439539
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccct 176  Q
    |||||||| |||||||||||  ||||||||| |||||||| ||||| | |||  | |||||||| |||||||||||||||||||    
T  46439622 gactaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtccct 46439539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 8423363 - 8423286
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||||| |||||| |||| ||| ||||||| ||||| |||||||||||  |||||||| ||||||| |||||||||||    
T  8423363 caaatttgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtcaatcaaaaaggtccctccgt 8423286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 228
Target Start/End: Complemental strand, 47341800 - 47341675
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |    |||| ||||||| ||||| |||| ||| ||||||| | |||||||||||||||  |||||||  ||||||| |    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgttaatcaaaaag 47341701  T
Q  203 gtccctccgtccaaaagctccgttag 228  Q
    ||  ||||||||||  ||||||||||    
T  47341700 gtatctccgtccaagtgctccgttag 47341675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 11682821 - 11682925
Alignment:
Q  133 gtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggt 232  Q
    |||||| |||||||| |||| ||||||||||| | ||||||| ||||||    |||||||||||||  | ||||||||||||||   ||| |||||||||    
T  11682821 gtcaaaatcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaatctctctgttagtggt 11682920  T
Q  233 gatga 237  Q
    |||||    
T  11682921 gatga 11682925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 45463707 - 45463807
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||| |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  45463707 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T
Q  230 g 230  Q
    |    
T  45463807 g 45463807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 6056844 - 6056903
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||| ||||||| ||| |||||||||||||| |||| |||||||||| ||||||||||||    
T  6056844 gtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtg 6056903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 229
Target Start/End: Original strand, 27955380 - 27955506
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||||||||| |||||||||| |   ||| |  |||||| ||||| |||||| | ||||||| | ||| |  ||||||||  |||||||||||||||  |    
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  203 gtccctccgtccaaaagctccgttagt 229  Q
    ||||||||||||||  |||||||||||    
T  27955480 gtccctccgtccaagtgctccgttagt 27955506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 46439544 - 46439507
Alignment:
Q  203 gtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||||||| |||||    
T  46439544 gtccctccgtccaaaagctccgttagtggtgacgatgt 46439507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 46812696 - 46812583
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||| ||||| |||||||||| |  | |||| ||||||| ||||| ||||  |  ||||||| ||||||||||| |||||  |||||||||||||||| |    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaaaag 46812597  T
Q  203 gtccctccgtccaa 216  Q
    |||  |||||||||    
T  46812596 gtcattccgtccaa 46812583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 366733 - 366821
Alignment:
Q  128 aatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||| |||||||| |||||| | ||||   ||||||| | ||||||||||||||| ||||||||| |||||| |  |||||||||||||    
T  366733 aatcagtcaaatttgtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtccaa 366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 23962377 - 23962441
Alignment:
Q  166 atttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||| |||||||||||| ||| ||||| |||||||| |||| |||||| ||| ||||||||||||    
T  23962377 attttgtccctgaatttaacaaacgtcaatcaaaatagtccttccgtcaaaatgctccgttagtg 23962441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 48311801 - 48311733
Alignment:
Q  114 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| ||||||||| ||| | |||||||| |||| |||| ||  |||||||||||    
T  48311801 cttgaattttaaaaaatcagtcaaattcatccttaaattttgcgaaatgtctaattcatccctgaattt 48311733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 31913547 - 31913606
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||||||  ||| |||||||||||||| || | |||||||||| ||||||||||||    
T  31913547 gtccctgaattcaacaaacgtccatcaaaatagttcttccgtccaaatgctccgttagtg 31913606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 38614994 - 38614916
Alignment:
Q  134 tcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    |||||||| ||||| |||| ||| ||||||  | |||||||||||||||  ||||||||||| ||||| |||||||||||    
T  38614994 tcaaattcatccctcaattatgcgaaatattaacttagtccctgaatttgtcagacgtccataaaaat-gtccctccgtc 38614916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 38613568 - 38613498
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaa 200  Q
    |||| ||||||| ||||| |||| ||| ||||||| | |||||||||||||||  ||||||||||| ||||    
T  38613568 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaa 38613498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 217
Target Start/End: Original strand, 40784356 - 40784470
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    ||||||||||||||||||||| |    || |  |||||| ||| | |||| ||| ||||||| | ||||||  |||||||  ||||| |||||||||| |    
T  40784356 tcaaattcgttcttgaatttttacgcgtcagctaaattcatccttcaattatgcgaaatatcaacttagtctttgaatttgtcagacatccatcaaaaag 40784455  T
Q  203 gtccctccgtccaaa 217  Q
    |||||||||||||||    
T  40784456 gtccctccgtccaaa 40784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 48303737 - 48303636
Alignment:
Q  129 atcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    ||||||||||| |||||   |||||  ||||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| || |||||    
T  48303737 atcggtcaaatccgtcctctaatttaacaaaatatcaaaatagtccctgaatttatttgacgtccatcaatttcgtccctccgtccaaaaggtctgttag 48303638  T
Q  229 tg 230  Q
    ||    
T  48303637 tg 48303636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 7401958 - 7402030
Alignment:
Q  158 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    ||||||| | || |||||||||||| |||||||||||||||| |  || |||| ||||| | |||||||||||    
T  7401958 aaatatcaaattcgtccctgaatttaacagacgtccatcaaattcatcactccatccaatatctccgttagtg 7402030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 8421453 - 8421505
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||| ||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  8421453 tcggccaaattcgtccctcaattatgcgaaatatcaatttaatccctgaattt 8421505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 19712312 - 19712264
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaa 216  Q
    |||||| ||||||||   |||||||||||||||||||||| ||||||||    
T  19712312 ttagtctctgaatttattagacgtccatcaaaatggtcccaccgtccaa 19712264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 31915084 - 31915040
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtcca 215  Q
    |||||||||||| ||| |||||||||||||| |||||| ||||||    
T  31915084 gtccctgaatttaacaaacgtccatcaaaatagtccctacgtcca 31915040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 45465238 - 45465186
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||| ||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  45465238 tcggtcaacttcgtccctcaattatgcgaaatatcaatttaatccctgaattt 45465186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 88 - 237
Target Start/End: Original strand, 32516872 - 32517021
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacag 187  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| || |||||||||||     
T  32516872 tttttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacat 32516971  T
Q  188 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32516972 acgtccatcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 32439216 - 32439071
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32439216 tgactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 32439117  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||||||||||||||||||||| || |||||| |||||||    
T  32439116 ccatcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 7373079 - 7372935
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    |||||||||||||||||  ||||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 94 - 240
Target Start/End: Original strand, 20523367 - 20523513
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 193  Q
    |||||||| |||||||| | || ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  194 atcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||| || |||||||||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 13613707 - 13613559
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  13613707 tgactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 13613608  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||| | ||||||||||||||||| ||| ||||||||||||||||    
T  13613607 ccatcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 10568398 - 10568546
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||| ||||| |||||||||| |||||||||| ||||||| ||||||||||||| ||||||| || |||||| |||||||||||||||||||||||||||    
T  10568398 tgacgaatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgt 10568497  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||    
T  10568498 ctatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 94 - 237
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  94 actaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtcc 193  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||   ||||||||||| | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  194 atcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    | ||||||||||||||||||||||||||||| ||||||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 92 - 240
Target Start/End: Original strand, 6899484 - 6899632
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgt 191  Q
    |||||||||||||||||| || |||||||||| ||||||| |||||||||||| || |||||||  ||||||||||||||||||| |||||||||||| |    
T  6899484 tgactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacat 6899583  T
Q  192 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  6899584 ccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 9398713 - 9398807
Alignment:
Q  146 ctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 93 - 240
Target Start/End: Complemental strand, 32456015 - 32455868
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtc 192  Q
    ||||||||||||||| | || |||||||||| ||||||||||||| |||||||||||||||| | ||||||| | |||||| ||||||||| ||||||||    
T  32456015 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtc 32455916  T
Q  193 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||   ||||||||||||||||  ||||||| |  |||||||||    
T  32455915 catcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgt 32455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 11357283 - 11357194
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  11357283 gactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 11357194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 108 - 240
Target Start/End: Complemental strand, 14338584 - 14338452
Alignment:
Q  108 ttcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccc 207  Q
    ||||| |||||||||| ||||||| | |||||||||||   |||||||| |||| |||| ||  ||||||||||| ||||||||||||||||||||||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  208 tccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||| |||||||||||||| || |||||||||    
T  14338484 tccgttcaaaagctccgttactgatgatgatgt 14338452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 7049835 - 7049904
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7049835 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 10570008 - 10569927
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcc 10569927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 114 - 238
Target Start/End: Original strand, 3456769 - 3456893
Alignment:
Q  114 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtc 213  Q
    |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| | |||||||||||||||| |||||||||||||||   |||||||||||    
T  3456769 cttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtc 3456868  T
Q  214 caaaagctccgttagtggtgatgat 238  Q
    |||||  ||||||| | ||||||||    
T  3456869 caaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||| ||| |||||||||| ||||||||| |||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 20525423 - 20525334
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||||  ||||||||| |||||| |||||||||| |||||||||||||||||||| |||||| |||| |||||||    
T  20525423 gactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattt 20525334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 32518586 - 32518497
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||| ||| |||||||||||||| ||||||| | |||||||||||||||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 32518497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 182
Target Start/End: Original strand, 7371170 - 7371264
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||| |||||| ||||||||||||||| |||||  ||||| |||| |||||||    
T  7371170 tttttgactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaattt 7371264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 6902986 - 6902906
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||  ||||||||||||||||    
T  6902986 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgc-gaatatctatttagtcc 6902906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 7051335 - 7051255
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagt 172  Q
    |||||||||||| |||||||   ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  7051335 tgactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagt 7051255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 13610689 - 13610771
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    |||||||||||| |||||||| |||||||||| |||||||| ||||||| ||||||||||||||| ||||||| | |||||||    
T  13610689 tgactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtcc 13610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 18645192 - 18645104
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||| |||||||||| ||||||||| | |||||||| ||||||||||| ||||||| | ||||||| |||||||    
T  18645192 gactaatacctcaaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaattt 18645104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 3018519 - 3018421
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttag 228  Q
    |||| ||| ||||||||| |||| ||| ||||||| | |||||||||||||||  |||||||||||||||| ||||||||| |||||  ||||||||||    
T  3018519 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccatccaagtgctccgttag 3018421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 3480747 - 3480657
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| |||||||||||||||| | ||||||| |  ||||||||||||||    
T  3480747 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaattt 3480657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 8605419 - 8605349
Alignment:
Q  88 tttttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaa 158  Q
    |||| |||||||||||||||||||| |||||||||| ||||||| | ||||||||||||| ||||||||||    
T  8605419 ttttagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgcaa 8605349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 32454247 - 32454337
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||| ||| ||||||| |||||||| | ||||||| | |||||||||||||||    
T  32454247 tgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaattt 32454337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 174
Target Start/End: Original strand, 21068628 - 21068706
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtcc 174  Q
    ||||||||||||||||| |||||||||| || |||| |||||||||||||   |||||| | |||||||||||||||||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcc 21068706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 33276805 - 33276879
Alignment:
Q  97 aatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttag 171  Q
    |||| ||||| ||||| |||||||||||||||||| |||||||||||  || |||||||| ||||||||||||||    
T  33276805 aataactcaacttcgtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttag 33276879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 2968181 - 2968258
Alignment:
Q  135 caaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    ||||||||||||| |||| ||| ||||||| ||||| |||||||||||  |||||||||||||||| ||||| |||||    
T  2968181 caaattcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccatccgt 2968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 161  Q
    ||||||||||||||||| ||  ||||||||| ||||||||| ||| |||||||||||||||||| ||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 30891134 - 30891253
Alignment:
Q  103 tcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatg 202  Q
    |||| |||||||| ||||||  |  |||||||||||||  ||| | |||| ||||||||||   ||||||||||||||||  |||||||||| |||| |     
T  30891134 tcaatttcgttctagaatttgtacgaatcggtcaaatttatccttaaattatgcaaaatatacgtttagtccctgaatttgtcagacgtccaacaaagta 30891233  T
Q  203 gtccctccgtccaaaagctc 222  Q
    ||||||||||||||| ||||    
T  30891234 gtccctccgtccaaatgctc 30891253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 4641392 - 4641474
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| ||||||||||||| |||| ||  ||||||| ||||| |||||||||||  ||||| |||||||||| |||||||||||    
T  4641392 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 4641474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 29077365 - 29077447
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| |||||| |||||| |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |||||||||||    
T  29077365 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 29077447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 212
Target Start/End: Original strand, 29112337 - 29112419
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| |||||| |||||| |||| ||| |||| || ||||  |||||||||||  |||||||||||||||| |||||||||||    
T  29112337 tcggccaaattagtccctcaattatgcgaaatttcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 29112419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  97 aatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaatttt 154  Q
    |||| ||||||||| | |||||||||| ||||||| | ||||||||||||||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 11163875 - 11163940
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 233  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  11163875 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 11163940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 17952129 - 17952029
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    |||| ||||||||||||  |||||  | ||||||| |  ||||||||||||||    ||||||||||||  | ||||||||||||||||| |||||||||    
T  17952129 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T
Q  230 g 230  Q
    |    
T  17952029 g 17952029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 25172154 - 25172097
Alignment:
Q  172 tccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagt 229  Q
    ||||||||||| ||| |||||||| ||||| |||| |||||||||| ||||| |||||    
T  25172154 tccctgaatttaacaaacgtccataaaaatagtccttccgtccaaatgctccattagt 25172097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  96 taatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccat 195  Q
    ||||||||||||| ||| ||||||||||||||||| ||| |||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  196 caaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 98; Significance: 2e-48; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 3292 - 3441
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||| || ||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  3292 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 3391  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||| | ||||||||||||||||| ||||||| | ||||||||||    
T  3392 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 240
Target Start/End: Original strand, 4464 - 4613
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacg 190  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||| || ||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  4464 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4563  T
Q  191 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 240  Q
    ||||||||| | ||||||||||||||||| ||||||| | ||||||||||    
T  4564 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 14434 - 14343
Alignment:
Q  91 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||||||| |||||||||| |||||||||  || |||||||||||||||||| ||||||| | |||||||||||||||    
T  14434 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 14343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 95 - 237
Target Start/End: Original strand, 8264 - 8404
Alignment:
Q  95 ctaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtcca 194  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttt--atacgtcca 8361  T
Q  195 tcaaaatggtccctccgtccaaaagctccgttagtggtgatga 237  Q
    |||||||||| | |||||||||||||| |||||||||||||||    
T  8362 tcaaaatggtacatccgtccaaaagcttcgttagtggtgatga 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 1644 - 1555
Alignment:
Q  93 gactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  1644 gactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaattt 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 54348 - 54258
Alignment:
Q  92 tgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||| | || |||||||||| ||||||||||||| |||||||||||||||| | ||||||| | |||||||||||||||    
T  54348 tgactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 54258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 436272 - 436341
Alignment:
Q  100 acctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctattt 169  Q
    |||||||||||||||||||||||| ||||||| | ||||||| ||| | |||||||| ||||||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

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Target: scaffold1712 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 979 - 1071
Alignment:
Q  90 tttgactaatacctcaaattcgttcttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattt 182  Q
    |||||||||||||||||| | || |||||||||| |||||||||  || |||||||||||||| | | ||||||| |  ||||||||||||||    
T  979 tttgactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattt 1071  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 37282 - 37349
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgat 238  Q
    |||| ||||||||||||||||| |||||||||||  |||| ||||||| |||||||| ||||||||||    
T  37282 gtccatgaattttacagacgtctatcaaaatggtttctccatccaaaaactccgttaatggtgatgat 37349  T

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Target: scaffold0477 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 6721 - 6639
Alignment:
Q  130 tcggtcaaattcgtccctgaattttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgt 212  Q
    |||| ||||||||||||| |||| ||  ||||||| ||||| |||||||||||  ||||| |||||||||| |||||||||||    
T  6721 tcggccaaattcgtccctcaattatgtgaaatatcaatttaatccctgaatttatcagacctccatcaaaaaggtccctccgt 6639  T

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Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 36899 - 36834
Alignment:
Q  168 ttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtg 233  Q
    ||||||||||||||| ||| ||||| |||||| | |||| |||||||||| || ||||||||||||    
T  36899 ttagtccctgaatttaacaaacgtcaatcaaattagtccttccgtccaaatgcaccgttagtggtg 36834  T

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Target: scaffold0204 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 30517 - 30458
Alignment:
Q  171 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 230  Q
    |||||||||||| ||| ||||| |||||||| || | |||||||||| ||||||||||||    
T  30517 gtccctgaatttaacaaacgtcaatcaaaatagttcttccgtccaaatgctccgttagtg 30458  T

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