View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3150_low_25 (Length: 286)
Name: NF3150_low_25
Description: NF3150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3150_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 7256976 - 7256699
Alignment:
| Q |
1 |
ctcctttattttatcccataagcaacatgattgcatgaatggatttcaatctttggtttcacacctcactatggctttttcaactttgtaaaatcctttg |
100 |
Q |
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| T |
7256976 |
ctcctttattttatcccataagcaacatgattgcatgaatggatttcaatctttggtttcacacctcactatggctttttcaactttgtaaaatcctttg |
7256877 |
T |
|
| Q |
101 |
ttagatttttgttttctgaggcaaacaaattaattgagcattcgttttgcaagtgtttgttagtatatagtattctgattcaattataagaagaag-aaa |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||| |
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| T |
7256876 |
ttagatttttgttttctgaggcaaacaaattaattgagcattcgttttgtaagtgtttattagtatatagcattctgattcaattataagaagaagaaaa |
7256777 |
T |
|
| Q |
200 |
gaaacaagattttaatcttcctacttttctttctatttctatttattacacttatttaaaatattgttgctttaccta |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7256776 |
aaaacaagattttaatcttcctacttttctttctatttctatttattacacttatttaaaatattgttgctttaccta |
7256699 |
T |
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