View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3150_low_5 (Length: 651)
Name: NF3150_low_5
Description: NF3150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3150_low_5 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 569; Significance: 0; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 20 - 632
Target Start/End: Original strand, 26678358 - 26678970
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26678358 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctggcaccaa |
26678457 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26678458 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
26678557 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
|||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26678558 |
cacgaaaagttctatcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgtataagagagcatcttaattttccgtaacctgaaga |
26678657 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26678658 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
26678757 |
T |
|
| Q |
420 |
caagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttt |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26678758 |
caagataaaaacaaatgagtctcggactcctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgacgaaacagatttgttt |
26678857 |
T |
|
| Q |
520 |
tagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgccggaacaatattagtggg |
619 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
26678858 |
tagaaggcaatctatgccgaaaaagacgccaagcaaaaaccgacaccttcaccgggacatcctttctccataagagagccgctgaaacaatattagtggg |
26678957 |
T |
|
| Q |
620 |
aggcgtcctatca |
632 |
Q |
| |
|
||||||||||||| |
|
|
| T |
26678958 |
aggcgtcctatca |
26678970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 480; E-Value: 0
Query Start/End: Original strand, 20 - 632
Target Start/End: Complemental strand, 10290665 - 10290049
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||||||| ||| ||| |||||| |
|
|
| T |
10290665 |
aggtgtaccattgaagaccgctcaaaaattacaaacaagttcaaacagagcaatcaaaaatcaaccaatgcccgcacaaaggaacagggtctggcaccaa |
10290566 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
10290565 |
tcataaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaaagagagaagtttaatagtctccaacatttgataatgagaacgttcttgac |
10290466 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
10290465 |
catgaaaaatcatgtcattcctttctttccataactcccatacagttgcaaaccaaatcaaatgcataagtgagcatcttgattttccgtaacctgaaga |
10290366 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaa----taagctgccaaatatgaccaaaaag |
415 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10290365 |
agtgccaaattgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattctgaataattaagctgccaaatatgaccaaaaag |
10290266 |
T |
|
| Q |
416 |
agtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagattt |
515 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
10290265 |
agtacaagataaaaacaaatgagtctcggactcctgttgaccgcaaccactaatacatggttgagcctcaggaggaataatgcctcgacgaaacagattt |
10290166 |
T |
|
| Q |
516 |
gttttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgccggaacaatattag |
615 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
10290165 |
gttttagaaggaaatctatgccgaaaaagacgccaagcaaacaccgacaccttcaccgggacatcctttctccataagagagccgctagaacattattag |
10290066 |
T |
|
| Q |
616 |
tgggaggcgtcctatca |
632 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
10290065 |
tgggaggcgtcctatca |
10290049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 232 - 352
Target Start/End: Complemental strand, 32991887 - 32991767
Alignment:
| Q |
232 |
tgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactg |
331 |
Q |
| |
|
||||||| ||||| ||||||||| ||||| | ||||||||||||||||||| |||||||||| | |||| || ||||||| || | |||||||| |
|
|
| T |
32991887 |
tgtcatttctttccttccatatcacccatgaggaagcaaaccaaatcaaatgcaatagagagcatcgtgatttgccaaaacctgatgatgaaccaaactg |
32991788 |
T |
|
| Q |
332 |
atgaaaatgatccacaatgtt |
352 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
32991787 |
atgaaaatgatcaacaatgtt |
32991767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 589
Target Start/End: Complemental strand, 16316088 - 16315823
Alignment:
| Q |
319 |
aagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagt |
418 |
Q |
| |
|
|||| |||||| ||| |||||||||||||| ||| ||||| || || ||||||||||||||||||| || |||||||| | || ||||||| | |
|
|
| T |
16316088 |
aagtaccaaacagatagaaatgatccacaatattagatggatctgctgagtaaacaccaagccaattcctaaccagctgccataactggccaaaaaaatg |
16315989 |
T |
|
| Q |
419 |
acaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgtt |
518 |
Q |
| |
|
|||||| |||| | ||||||| || |||||||| || | ||| || ||| ||||||| || ||||| ||||||||||| | ||||||||||||| |
|
|
| T |
16315988 |
acaagacaaaagc----gagtctctga-ttctgttgcccacggccagaaacacacagttgagtcttagaagtaataatgcctctaagaaacagatttgtc |
16315894 |
T |
|
| Q |
519 |
ttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctcca |
589 |
Q |
| |
|
|||| ||||| |||| ||| ||||||| ||||||||| | || ||||||| ||| || ||||| ||||| |
|
|
| T |
16315893 |
ttagtgggcaacctattccggaaaagacaccaagcaaacatggaaaccttcaacggaacgtccttcctcca |
16315823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 430
Target Start/End: Original strand, 9547846 - 9548042
Alignment:
| Q |
234 |
tcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgat |
333 |
Q |
| |
|
||||| ||||| ||||| ||| | || ||| | |||||| |||||||| ||| | ||| || ||| ||||| || |||||||| || |||||||||| |
|
|
| T |
9547846 |
tcatttctttccttccaaatcactcaaacactagcaaacgaaatcaaagacatgaaagaacaccttgattttgcgatacctgaagtggtaccaaactgat |
9547945 |
T |
|
| Q |
334 |
gaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagtacaagataaaaa |
430 |
Q |
| |
|
|||||||||| ||||| |||| | |||||| |||| ||||| | ||||||| || |||||| ||||| |||||||| |||| ||||| ||||| |
|
|
| T |
9547946 |
gaaaatgatcaacaatattacatgaatccgctgaatgaacacatattcaattcctaacaagctgtcaaatctgaccaaacagagggcaagacaaaaa |
9548042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 387
Target Start/End: Complemental strand, 12808463 - 12808400
Alignment:
| Q |
324 |
ccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattcc |
387 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||| || || ||||||||||||||||||| |
|
|
| T |
12808463 |
ccaaactgatagaaatgatccacaatattagacggatctgcggagtaaacaccaagccaattcc |
12808400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 565; Significance: 0; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 565; E-Value: 0
Query Start/End: Original strand, 20 - 632
Target Start/End: Complemental strand, 5278756 - 5278144
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5278756 |
aggtgtaccactgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctagcaccaa |
5278657 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5278656 |
tcatgaaaacaataaggaaatacagtaaatttaaccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
5278557 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
5278556 |
cacgaaaaattctgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcttaagagagcatcttaattttccgtaacctgaaga |
5278457 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5278456 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
5278357 |
T |
|
| Q |
420 |
caagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttt |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5278356 |
caagataaaaacaaatgagtctcggactcctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgacgaaacagatttgttt |
5278257 |
T |
|
| Q |
520 |
tagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgccggaacaatattagtggg |
619 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5278256 |
tagaaggcaatctatgccgaaaaagacgccaaggaaaaaccgacaccttcaccgggacatcctttctccataagagagccgctggaacaatattagtggg |
5278157 |
T |
|
| Q |
620 |
aggcgtcctatca |
632 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5278156 |
aggcgtcctatca |
5278144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 202 - 636
Target Start/End: Complemental strand, 30651272 - 30650846
Alignment:
| Q |
202 |
aatgagaacgttcttgaccacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaa |
301 |
Q |
| |
|
||||||||| ||||||||| | |||||| ||||||||||||||||||||| | |||| | ||| ||||| ||||||||||||||||| || | |
|
|
| T |
30651272 |
aatgagaacattcttgaccgtggaaaatcatgtcattcctttctttccataacacccacagagtagcaaatcaaatcaaatgcataag--------ttga |
30651181 |
T |
|
| Q |
302 |
ttttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaa |
401 |
Q |
| |
|
|||||| |||| || |||| ||||||||| | ||||||||| ||||||||||| ||||| || |||||||||| ||| |||| ||||||| ||||||| |
|
|
| T |
30651180 |
ttttccataactcgacgaagagccaaactggtaaaaatgatctacaatgttaccgggatcagcggaataaacactgagctaatttcgaataaactgccaa |
30651081 |
T |
|
| Q |
402 |
atatgaccaaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctc |
501 |
Q |
| |
|
|| ||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||||| ||| || | |||||| ||| |||| ||||| | |
|
|
| T |
30651080 |
atctgataaaaaaaagtacaagataaaaacaaatgagtctccgactcctgttgaccgcacccactaacacaaagctaagcctcggaatgaattatgccac |
30650981 |
T |
|
| Q |
502 |
gatgaaacagatttgttttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgc |
601 |
Q |
| |
|
| ||||||| ||| | |||| |||||||||||||||||||||||| |||||||| || |||||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
30650980 |
aaagaaacaggtttatcttagtaggcaatctatgccgaaaaagacgtcaagcaaacactgacaccttcaatgagacatcctttctccataaaagagccgc |
30650881 |
T |
|
| Q |
602 |
cggaacaatattagtgggaggcgtcctatcagtga |
636 |
Q |
| |
|
|| ||| ||||||||| ||||||||||||||||| |
|
|
| T |
30650880 |
aggtacattattagtggtaggcgtcctatcagtga |
30650846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 267 - 416
Target Start/End: Complemental strand, 12656934 - 12656785
Alignment:
| Q |
267 |
gcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcag |
366 |
Q |
| |
|
|||||||||||||||||||| | ||| | || |||| | |||| ||||||||| |||||||||||||||||||||||||| ||| |||| || | |
|
|
| T |
12656934 |
gcaaaccaaatcaaatgcatgaaagaatacattgatttagcataacatgaagaagtaccaaactgatgaaaatgatccacaatattagaatgatctgctg |
12656835 |
T |
|
| Q |
367 |
aataaacaccaagccaattccgaataagctgccaaatatgaccaaaaaga |
416 |
Q |
| |
|
|||| |||| || |||||||| || ||||||||||||||||||||||||| |
|
|
| T |
12656834 |
aatatacacaaatccaattcctaacaagctgccaaatatgaccaaaaaga |
12656785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 310 - 498
Target Start/End: Original strand, 5182191 - 5182379
Alignment:
| Q |
310 |
aacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgacc |
409 |
Q |
| |
|
|||||||||| | |||||||||||||||| ||| ||| ||||| ||||| | |||| ||||| |||||| |||| || |||||| ||||| ||||| |
|
|
| T |
5182191 |
aacctgaagatgaaccaaactgatgaaaataatcgacagtgttagatggatcaactgaatgaacacaaagccagttcctaacaagctgtcaaatctgacc |
5182290 |
T |
|
| Q |
410 |
aaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgc |
498 |
Q |
| |
|
||| || ||| | |||||| ||| ||||||| || | ||| |||| ||||||||||| ||| || ||||||||||||||||||||| |
|
|
| T |
5182291 |
aaatagtcgacatgttaaaaataaacgagtctctgattcctgatgactgcaaccactaacacacagcagagcctcagaaggaataatgc |
5182379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 33261063 - 33261009
Alignment:
| Q |
267 |
gcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaag |
321 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | |||| |||||||||| ||||| |
|
|
| T |
33261063 |
gcaaaccaaatcaaatgcataaaagagcatttagatttaccgtaacctgtagaag |
33261009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 33281222 - 33281168
Alignment:
| Q |
267 |
gcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaag |
321 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | |||| |||||||||| ||||| |
|
|
| T |
33281222 |
gcaaaccaaatcaaatgcataaaagagcatttagatttaccgtaacctgtagaag |
33281168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 8397857 - 8397902
Alignment:
| Q |
240 |
ctttctttccatatctcccatacagttgcaaaccaaatcaaatgca |
285 |
Q |
| |
|
|||| ||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
8397857 |
ctttatttccatatttcccacacagtagcaaaccaaatcaaatgca |
8397902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 27099713 - 27099765
Alignment:
| Q |
225 |
aaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaat |
277 |
Q |
| |
|
|||||||||| ||| |||||||||||||| | ||| ||||| ||||||||||| |
|
|
| T |
27099713 |
aaaatcttgttatttctttctttccatattttccacacagtagcaaaccaaat |
27099765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 557; Significance: 0; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 20 - 632
Target Start/End: Complemental strand, 5696951 - 5696339
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5696951 |
aggtgtaccattcaagactgcccaaaagttacaaacaagttcagataggacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
5696852 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5696851 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
5696752 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5696751 |
cacgaaaaatcctgtcattcctttctttccatatctcccatacagttgcaagctaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
5696652 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
5696651 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcataataaacaccaagccaattccgaataagatgccaaatatgaacaaaaagagta |
5696552 |
T |
|
| Q |
420 |
caagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttt |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5696551 |
caagataaaaacaaatgagtctcggactcctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgacgaaacagatttgttt |
5696452 |
T |
|
| Q |
520 |
tagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgccggaacaatattagtggg |
619 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5696451 |
taaaaggcaatctatgccgaaaaagacgccaagcaaaaaccgacaccttcaccgggacatcctttctccataagagagccgctggaacaatattagtggg |
5696352 |
T |
|
| Q |
620 |
aggcgtcctatca |
632 |
Q |
| |
|
||||||||||||| |
|
|
| T |
5696351 |
aggcgtcctatca |
5696339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 20 - 632
Target Start/End: Original strand, 6017612 - 6018224
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6017612 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccacacaaaggaacggggcctgacaccaa |
6017711 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6017712 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgat |
6017811 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6017812 |
cgcgaaaaatcctgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
6017911 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
419 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6017912 |
agtgccaaactgataaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
6018011 |
T |
|
| Q |
420 |
caagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttt |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
6018012 |
caagataaaaacaaatgagtctcggactcctattgaccgtaaccaccaatacatagttgagcctcagaaggaataatgcctcaacgaaacagatttgttt |
6018111 |
T |
|
| Q |
520 |
tagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgccggaacaatattagtggg |
619 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
6018112 |
tagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccggaacatcctttctccataagagagccgttggaacagtattagtggg |
6018211 |
T |
|
| Q |
620 |
aggcgtcctatca |
632 |
Q |
| |
|
||||||||||||| |
|
|
| T |
6018212 |
aggcgtcctatca |
6018224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 529; E-Value: 0
Query Start/End: Original strand, 20 - 632
Target Start/End: Complemental strand, 25036799 - 25036187
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
||||||| |||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
25036799 |
aggtgtatcattgaagaccgtccaaaagttataaacaagttcagatagagcaaacaaaaatcaaccaatgcccgcacaaaggaacggggcctgacaccaa |
25036700 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
25036699 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaaagagagaagtttaatagtctccaacatttgataatgagaacgttcttgac |
25036600 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
25036599 |
cacgaaaaatcctgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagtgagcatcttaattttccgtaacctgaaga |
25036500 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
419 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
25036499 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgctaaatatgaccaaaaagagta |
25036400 |
T |
|
| Q |
420 |
caagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttt |
519 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||| |
|
|
| T |
25036399 |
caagataaaaacaaatgagtctcggactcctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatacctcgacgaaacaaatttgttt |
25036300 |
T |
|
| Q |
520 |
tagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgccggaacaatattagtggg |
619 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
25036299 |
tagaaggcaatctatgccgaaaaagacgccaagcaaacaccgacaccttcatcgggacatcctttctccataagagagccgctagaacattattagtggg |
25036200 |
T |
|
| Q |
620 |
aggcgtcctatca |
632 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
25036199 |
aggtgtcctatca |
25036187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 20 - 372
Target Start/End: Complemental strand, 8644004 - 8643654
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||| | ||| ||| ||||||||||| |||||| ||||||||||| |||| ||| |||||| |
|
|
| T |
8644004 |
aggtgtaccattgaagaccgtccaaaagttacaaatctgttcaaacagagcaatcaaaaatcaaccaatgcctgcacaaaggaaaggggtctggcaccaa |
8643905 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| || || |
|
|
| T |
8643904 |
tcatgaaaataataaggaaatacagtcaatttagccttaaaccaccaaaaagagagaagtttaataccctccaacatttgataatgagaacgttttttac |
8643805 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| | |
|
|
| T |
8643804 |
cacgaaaaatcctgtcattcctttcttcccataactccc--acagttgcaaaccaaatcaaatgaataagtgagcatcttgattttccgtaacctgaaca |
8643707 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaa |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8643706 |
agtgccaaactgatgaaaatgatccacaatgttacccgaatccgcagaataaa |
8643654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 268 - 464
Target Start/End: Original strand, 14362017 - 14362213
Alignment:
| Q |
268 |
caaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcaga |
367 |
Q |
| |
|
||||| ||||||| ||||||| ||| || || |||| | |||||||||||||| |||||||||||||||||||||| | |||| |||||||| | |
|
|
| T |
14362017 |
caaactaaatcaagtgcataaaagaacacattgatttggcataacctgaagaagtaccaaactgatgaaaatgatccaatacgttagatggatccgctaa |
14362116 |
T |
|
| Q |
368 |
ataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaacca |
464 |
Q |
| |
|
|| |||||| | ||| ||| || ||||| |||||| |||||||| ||| |||||| ||||| ||||| |||| || | ||| ||||||||||| |
|
|
| T |
14362117 |
atgaacacccaaccatgtcctaagaagcttccaaatctgaccaaagagactacaagtaaaaaataaatgcttctctgattcctgaagaccgcaacca |
14362213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 412
Target Start/End: Original strand, 14339069 - 14339165
Alignment:
| Q |
316 |
aagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaa |
412 |
Q |
| |
|
||||||| | |||||||||||||||||| | ||||| |||||||| |||| || || ||||||| ||| || |||||||||||| |||||||| |
|
|
| T |
14339069 |
aagaagttctaaactgatgaaaatgatctaatgtgttagatggatccgctgaatgaagacaaagccaaatcctaagaagctgccaaatctgaccaaa |
14339165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 455; Significance: 0; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 20 - 498
Target Start/End: Original strand, 20848057 - 20848535
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20848057 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
20848156 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20848157 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
20848256 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaaga |
319 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
20848257 |
cacgaaaaattctgtcattcctttctttccatatttcccatacagttgcaaaccaaatcaaatgcataagagaacatcttaattttccgtaacctgaaga |
20848356 |
T |
|
| Q |
320 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20848357 |
agtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagta |
20848456 |
T |
|
| Q |
420 |
caagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgc |
498 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
20848457 |
caagataaaaacaaatgagtctcggactcctgttgaccgcaaccactaatacaaagttgagcctcagaaggaataatgc |
20848535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 270
Target Start/End: Original strand, 1118342 - 1118592
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
1118342 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcaaacagagcaatcaaaaatcaaccaatgcccgcacaaaggaacggggtctgacaccaa |
1118441 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1118442 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaaagaggaaagtttaatagcctccaacatttgataatgagaacgttcttgac |
1118541 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaa |
270 |
Q |
| |
|
||||||||||| |||||||| |||||||||||| ||||||||| ||||||| |
|
|
| T |
1118542 |
cacgaaaaatcctgtcattcatttctttccataactcccataccgttgcaa |
1118592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 267 - 556
Target Start/End: Original strand, 7516454 - 7516743
Alignment:
| Q |
267 |
gcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcag |
366 |
Q |
| |
|
||||||||||||| ||||||||| || |||| ||||||| || ||||||||||| |||||||||| |||||||||||||| ||| ||||| || | |
|
|
| T |
7516454 |
gcaaaccaaatcagatgcataagcgaacatcgagattttccatagcctgaagaagtaccaaactgatagaaatgatccacaatattagatggatctgccg |
7516553 |
T |
|
| Q |
367 |
aataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccact |
466 |
Q |
| |
|
| |||||| ||||||||||| || | ||||| | || ||||||| | |||||| ||||| || |||||||| || | |||||| || |||||| |
|
|
| T |
7516554 |
agtaaacatcaagccaattcataaccaattgccataactggccaaaaaaatgacaagacaaaaataagtgagtctctgattcctgttgcccacaaccaga |
7516653 |
T |
|
| Q |
467 |
aatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttttagaaggcaatctatgccgaaaaagacgccaagcaaa |
556 |
Q |
| |
|
|| ||| |||||||||||| ||| ||||||| ||| | | ||||||||||| ||||| ||||| ||| || |||||||| |||||||| |
|
|
| T |
7516654 |
aacacacagttgagcctcataagtaataatgtctctacggaacagatttgtgttagagggcaacatattccagaaaagacgtcaagcaaa |
7516743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 35503900 - 35503837
Alignment:
| Q |
225 |
aaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataa |
288 |
Q |
| |
|
|||||| ||| ||| |||||||||||||| ||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
35503900 |
aaaatcctgttatttctttctttccatatttcccaaacagtagcaaaccaaattaaatgcataa |
35503837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 609
Target Start/End: Complemental strand, 7957786 - 7957487
Alignment:
| Q |
309 |
taacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgac |
408 |
Q |
| |
|
||||||||||| | |||||||||| ||||||||||| || ||| ||||||| || ||||||| |||||||||| || |||||||||||| |||| |
|
|
| T |
7957786 |
taacctgaagatataccaaactgataaaaatgatccaatatattagatggatccggtgagtaaacacaaagccaattcgtaacaagctgccaaatctgac |
7957687 |
T |
|
| Q |
409 |
caaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaa |
508 |
Q |
| |
|
| | ||| |||||| || ||| |||||| || | || | |||| |||||||||||||| ||| | ||| || ||| || |||||| |||| || | |
|
|
| T |
7957686 |
c-atgagactacaagttagaaataaatgattccctgattcctgtaaaccgcaaccactaaaacacacttgtgcttcatgagaaataatccctctccgaca |
7957588 |
T |
|
| Q |
509 |
cagatttgttttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgccggaaca |
608 |
Q |
| |
|
||||| | | ||| |||||||||| || ||||| ||||||||||| ||| | |||||||| | | |||||| | ||||||||||| ||| |||||| |
|
|
| T |
7957587 |
tagattggctctagtgggcaatctatctcggaaaagccgccaagcaaacaccaagaccttcacaagaatatccttccaccataagagagtcgcgggaaca |
7957488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 28230783 - 28230844
Alignment:
| Q |
122 |
atgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaa |
183 |
Q |
| |
|
|||||||| |||| |||| ||| |||||||||| |||||||||||||| || ||||| |||| |
|
|
| T |
28230783 |
atgaaaactataatgaaaaacaataaatttagctttaaaccaccaaaaggaaagaagcttaa |
28230844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 275; Significance: 1e-153; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 70 - 636
Target Start/End: Complemental strand, 4373015 - 4372449
Alignment:
| Q |
70 |
caaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaatcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaa |
169 |
Q |
| |
|
||||||||||||| | |||||| |||||||| |||| ||| || ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4373015 |
caaacaaaaatcagccaatgcctgcacaaagaaacgaggcttggcaccaataatgaaaacaataaggaaatacagtaaatttagctctaaaccaccaaaa |
4372916 |
T |
|
| Q |
170 |
cgagagaagtttaatggcctccaacatttgataatgagaacgttcttgaccacgaaaaatcttgtcattcctttctttccatatctcccatacagttgca |
269 |
Q |
| |
|
| | |||| ||||| |||||||| | |||| || |||| |||||||| | | |||||| |||||||| |||| ||||||| | |||| ||| ||||| |
|
|
| T |
4372915 |
tgtgtgaagcttaatagcctccaaaaattgagaaggagaccgttcttgttcgcagaaaatcatgtcattcatttccttccataacacccacacacttgca |
4372816 |
T |
|
| Q |
270 |
aaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaat |
369 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| | ||||||||||||| ||||||||| ||||||||| ||||||||||| |||||||| |||| |
|
|
| T |
4372815 |
aaccaaatcaaatgcataattgagcatcttgattttccattacctgaagaagtgtcaaactgataaaaatgatctacaatgttaccgggatccgcggaat |
4372716 |
T |
|
| Q |
370 |
aaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaat |
469 |
Q |
| |
|
|||||| || ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
4372715 |
aaacacaaaaccaattccgaataagctgccagatctgaccaaaaagagtacaagataaaaacaaatgagtctccgactcctattgaccgcaaccactaac |
4372616 |
T |
|
| Q |
470 |
acatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttc |
569 |
Q |
| |
|
||| |||||||||||||||||||||||| | ||| |||||||| |||| |||| |||||||| |||||||||||||||| ||||||| ||||| |||||| |
|
|
| T |
4372615 |
acacagttgagcctcagaaggaataatgtcacgacgaaacagacttgtcttagtaggcaatccatgccgaaaaagacgcaaagcaaacaccgataccttc |
4372516 |
T |
|
| Q |
570 |
accgggacatcctttctccataagagagccgccggaacaatattagtgggaggcgtcctatcagtga |
636 |
Q |
| |
|
| | ||||||||| |||||||||||| | ||| || ||| |||||||||||| || |||| ||||| |
|
|
| T |
4372515 |
aacaggacatcctgtctccataagagtgtcgcaggtacatgattagtgggaggtgttctattagtga |
4372449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 113 - 601
Target Start/End: Complemental strand, 12716192 - 12715707
Alignment:
| Q |
113 |
acaccaatcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgt |
212 |
Q |
| |
|
|||||||| |||||||| ||||||||| || ||||||| | ||| ||||||||| || || |||| || ||||||||| || ||||| |||| ||| |
|
|
| T |
12716192 |
acaccaattatgaaaactataaggaaaagcaacaaatttaactttataccaccaaat-gataggagttcaacggcctccaaaatctgatagggagatcgt |
12716094 |
T |
|
| Q |
213 |
tcttgaccacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaac |
312 |
Q |
| |
|
||||||||||| || | | | || |||||||| ||||||| | ||| ||| ||||||||||||||||||||| ||||| ||||||| |||| || ||| |
|
|
| T |
12716093 |
tcttgaccacggaataacatttcgttcctttccttccataacatccacacatttgcaaaccaaatcaaatgcaaaagagggcatcttgatttgccaaaac |
12715994 |
T |
|
| Q |
313 |
ctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaa |
412 |
Q |
| |
|
| |||||||| ||||||||| |||||||| ||||| |||| |||||||| | |||||||| | |||||||||||||||||| ||| | || | || |
|
|
| T |
12715993 |
gtaaagaagtgtcaaactgataaaaatgattgacaatattacaaggatccgccgcataaacacaa--ccaattccgaataagctgtcaactctggacgaa |
12715896 |
T |
|
| Q |
413 |
aagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacaga |
512 |
Q |
| |
|
|| | ||| |||||||||||| |||||||| |||| ||| ||||| |||||| | | ||| || || |||| ||||||||||||| ||| ||||| | |
|
|
| T |
12715895 |
aaaattacgagataaaaacaagtgagtctccgactcctgatgaccacaaccaatgacacacagctggtcctctaaaggaataatgccacgacaaaacata |
12715796 |
T |
|
| Q |
513 |
tttgttttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgc |
601 |
Q |
| |
|
||||| |||||| ||||||| |||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
12715795 |
tttgtcttagaacgcaatctgtgcctaaaaagacgccaaacaaacaccgacaccttcaacggaacatcctttctccataagagagccgc |
12715707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 442
Target Start/End: Complemental strand, 11773867 - 11773692
Alignment:
| Q |
267 |
gcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcag |
366 |
Q |
| |
|
|||||||||||||||||||| | ||| || ||| |||| | |||||| ||||||| ||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
11773867 |
gcaaaccaaatcaaatgcatgaaagaacaccttgatttagcataacctcaagaagtatgaaactgatgaaaatgatcctgaatgttagaaggatccgctt |
11773768 |
T |
|
| Q |
367 |
aataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagtacaagataaaaacaaatgagtctc |
442 |
Q |
| |
|
|| | |||||||||||||| | || |||||| |||||||| ||||| ||| |||| | ||||| |||||| |||| |
|
|
| T |
11773767 |
aacagacaccaagccaatttctaacaagctgtcaaatatggccaaatagactacatgtcaaaaataaatgattctc |
11773692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 601
Target Start/End: Complemental strand, 11773616 - 11773533
Alignment:
| Q |
518 |
tttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcaccgggacatcctttctccataagagagccgc |
601 |
Q |
| |
|
|||||| |||||||||| ||||||||||| |||||||| | || ||||||| ||||||||||| |||||| ||||||||| |
|
|
| T |
11773616 |
tttagatggcaatctattccgaaaaagacaacaagcaaacattgagaccttcaatgggacatccttcctccatgggagagccgc |
11773533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 29132513 - 29132560
Alignment:
| Q |
267 |
gcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacct |
314 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||| ||||||||| |
|
|
| T |
29132513 |
gcaaaccaaatcaaatgcataaaagagcatctagatttaccgtaacct |
29132560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 13157405 - 13157352
Alignment:
| Q |
224 |
aaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaat |
277 |
Q |
| |
|
||||||||||| || |||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
13157405 |
aaaaatcttgttgtttctttctttccatatttcccacactgttgcaaaccaaat |
13157352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 414
Target Start/End: Complemental strand, 41996440 - 41996383
Alignment:
| Q |
357 |
ggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaa |
414 |
Q |
| |
|
|||||||| | | |||||||||||||||| |||| ||| |||||||| |||||||||| |
|
|
| T |
41996440 |
ggatccgctgcacaaacaccaagccaattacgaacaagttgccaaatttgaccaaaaa |
41996383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 270; Significance: 1e-150; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 72 - 636
Target Start/End: Complemental strand, 34793231 - 34792677
Alignment:
| Q |
72 |
aacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaatcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacg |
171 |
Q |
| |
|
||||||||||| | ||||||||||||||| || ||||| || || |||| ||||||||||||| |||||||| ||||||||| |||||||||||||| | |
|
|
| T |
34793231 |
aacaaaaatcagccaatgcccgcacaaagaaaaggggcttggcatcaattatgaaaacaataacgaaatacataaaatttagctttaaaccaccaaaagg |
34793132 |
T |
|
| Q |
172 |
agagaagtttaatggcctccaacatttgataatgagaacgttcttgaccacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaa |
271 |
Q |
| |
|
| || |||||||| ||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||| ||||| |
|
|
| T |
34793131 |
atagcagtttaatagcctccacaagttgataatgagaacg----------cgaaaaatcctgtcattcctttctttccataacacccatacagtagcaaa |
34793042 |
T |
|
| Q |
272 |
ccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataa |
371 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| ||||| || |||| ||||||||| | ||||||||| | ||||||| ||||| || |||||| |
|
|
| T |
34793041 |
ccaaatcaaatgcataagtgagcatcttgattttccataacccgatgaagagccaaactggtaaaaatgatctataatgttatttggatcggcggaataa |
34792942 |
T |
|
| Q |
372 |
acaccaagccaattccgaataagctgccaaatatgaccaaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatac |
471 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||||| || |
|
|
| T |
34792941 |
acaccaagccaattccgaataaactgccaaatctgaccaaaaatagtacaagataaaaacaaatgagtctctgactcctgttgaccgcacccactaacac |
34792842 |
T |
|
| Q |
472 |
atagttgagcctcagaaggaataatgcctcgatgaaacagatttgttttagaaggcaatctatgccgaaaaagacgccaagcaaataccgacaccttcac |
571 |
Q |
| |
|
| ||||||||||||||||||||||| || ||| |||||| ||| | |||| | |||||||||||||||||||| ||||||| || ||||||||||||| |
|
|
| T |
34792841 |
aaagttgagcctcagaaggaataataccacgacgaaacaagtttatcttagtatgcaatctatgccgaaaaagatgccaagcgaacaccgacaccttcag |
34792742 |
T |
|
| Q |
572 |
cgggacatcctttctccataagagagccgccggaacaatattagtgggaggcgtcctatcagtga |
636 |
Q |
| |
|
||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||| |
|
|
| T |
34792741 |
tgggacatcctttctccataagagagacgcatgtacattattagtgggaggcgtcctatcagtga |
34792677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 36438869 - 36439063
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||||||||| |||| |
|
|
| T |
36438869 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcaaagagaacaatcaaaaatcaaccaatgcccgcacaaa----------------ccaa |
36438952 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
36438953 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaaagagagaagtttaatagcctccaacatttgataatgagaacgttcttgac |
36439052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 301 - 442
Target Start/End: Complemental strand, 3743820 - 3743679
Alignment:
| Q |
301 |
attttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgcca |
400 |
Q |
| |
|
||||| || |||||||||| || |||||||||| ||||||||| |||||||| |||||| | |||| ||| ||||||||| ||| || ||||||||| |
|
|
| T |
3743820 |
attttgcgaaacctgaagaggtaccaaactgataaaaatgatctacaatgttggatggatccactgaatgaactccaagccaagtcctaacaagctgcca |
3743721 |
T |
|
| Q |
401 |
aatatgaccaaaaagagtacaagataaaaacaaatgagtctc |
442 |
Q |
| |
|
||| ||||||||||| ||||||| ||||||||| ||||||| |
|
|
| T |
3743720 |
aatctgaccaaaaaggctacaagacaaaaacaaacgagtctc |
3743679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 20 - 317
Target Start/End: Original strand, 31759251 - 31759548
Alignment:
| Q |
20 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcagatagaacaaacaaaaatcaactaatgcccgcacaaaggaacggggcctgacaccaa |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | | | ||| ||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
31759251 |
aggtgtaccattgaagaccgcccaaaagttacaaacaagttcaaacaaagcaatcaaaaatcaaccaatgcccgcacaaaggaacggggcctggcaccaa |
31759350 |
T |
|
| Q |
120 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaacgagagaagtttaatggcctccaacatttgataatgagaacgttcttgac |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
31759351 |
tcatgaaaacaataaggaaatacagtaaatttagccttaaaccaccaaaaagagagaagtttaatagcctccaacatttgaaaatgacaacgttcttgac |
31759450 |
T |
|
| Q |
220 |
cacgaaaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaa |
317 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||| ||||||||| ||||||||||||||||| |
|
|
| T |
31759451 |
cacgaaaaatcctgtcattcctttctttccataattcccacacaggtgcaaaccaaatcaaatacataagtgagcatcttgattttccgtaacctgaa |
31759548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 531
Target Start/End: Complemental strand, 23409612 - 23409388
Alignment:
| Q |
307 |
cgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatg |
406 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||| || |||||| | ||| ||| | ||||||||||| || |||||||||| || |
|
|
| T |
23409612 |
cgtaacctgaagaggtaccaaactgatgaaaatgatccacaatgctaaatggatccactaaatgaacgcaaagccaattccaaaccggctgccaaatttg |
23409513 |
T |
|
| Q |
407 |
accaaaaagagtacaagataaaaacaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatga |
506 |
Q |
| |
|
|||||||| | |||| || | ||| |||||| |||| || | ||||| ||| |||||||||| ||| | ||||||||| |||||||||| |||| | || |
|
|
| T |
23409512 |
accaaaaatattacatgacacaaataaatgattctccgattcctgttaaccacaaccactaacacacaactgagcctcataaggaataattcctctacga |
23409413 |
T |
|
| Q |
507 |
aacagatttgttttagaaggcaatc |
531 |
Q |
| |
|
|| | ||||| ||||| ||||||| |
|
|
| T |
23409412 |
aataaatttgacttagatggcaatc |
23409388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 31124236 - 31124176
Alignment:
| Q |
225 |
aaaatcttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgca |
285 |
Q |
| |
|
|||||| ||| ||| ||||||||||| || ||||| ||||| ||||||||||||||||||| |
|
|
| T |
31124236 |
aaaatcctgttatttctttctttccagatttcccacacagtagcaaaccaaatcaaatgca |
31124176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 230 - 556
Target Start/End: Complemental strand, 9781941 - 9781615
Alignment:
| Q |
230 |
cttgtcattcctttctttccatatctcccatacagttgcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaac |
329 |
Q |
| |
|
||||||||||||||| ||||||| | |||| | |||||||| ||| ||||| |||||| |||| | |||| || || || |||||||| | ||| |
|
|
| T |
9781941 |
cttgtcattcctttccttccataacacccacgaacaagcaaaccacatctgatgcaaaagagaacatcgtgatttaccatagccggaagaagtagcgaac |
9781842 |
T |
|
| Q |
330 |
tgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgaccaaaaagagtacaagataaaa |
429 |
Q |
| |
|
|| | ||||| ||||||||| ||| ||||| || ||||||||||||||||| || | || | |||||| | |||||||||| || ||||||||||| |
|
|
| T |
9781841 |
tggtaaaaataatccacaatattaaatggatctgctgaataaacaccaagccagtttctaaccaactgccataactgaccaaaaaaaggacaagataaaa |
9781742 |
T |
|
| Q |
430 |
acaaatgagtctcggacttctgttgaccgcaaccactaatacatagttgagcctcagaaggaataatgcctcgatgaaacagatttgttttagaaggcaa |
529 |
Q |
| |
|
| | ||| |||| | | |||||||| ||| ||| || ||| | |||||||| | ||||||||||||| | ||||||| ||||| || |||||||| |
|
|
| T |
9781741 |
atacatggttctcaaattcctgttgactgcagccagaaacacacatctgagcctcgaagggaataatgcctctacgaaacaggtttgtcttggaaggcaa |
9781642 |
T |
|
| Q |
530 |
tctatgccgaaaaagacgccaagcaaa |
556 |
Q |
| |
|
|||| | ||||||||||||||||||| |
|
|
| T |
9781641 |
cctattctgaaaaagacgccaagcaaa |
9781615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 403
Target Start/End: Original strand, 38733825 - 38733961
Alignment:
| Q |
267 |
gcaaaccaaatcaaatgcataagagagcatcttaattttccgtaacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcag |
366 |
Q |
| |
|
||||||||||||||||||||||||||| || | ||||| | | |||| |||| | |||||||||||||||||||||||| | | |||||||| | |
|
|
| T |
38733825 |
gcaaaccaaatcaaatgcataagagagtatttagattttacaaaccctgtagaataactaaactgatgaaaatgatccacaatatgagatggatccgccg |
38733924 |
T |
|
| Q |
367 |
aataaacaccaagccaattccgaataagctgccaaat |
403 |
Q |
| |
|
||||||||| |||||| || | | |||||||||||| |
|
|
| T |
38733925 |
aataaacacaaagccagtttcttacaagctgccaaat |
38733961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 309 - 412
Target Start/End: Complemental strand, 30235551 - 30235448
Alignment:
| Q |
309 |
taacctgaagaagtgccaaactgatgaaaatgatccacaatgttacccggatccgcagaataaacaccaagccaattccgaataagctgccaaatatgac |
408 |
Q |
| |
|
||||||||||| || |||||||||| ||||||||||| ||| ||| | ||||||| || |||| || ||||||||||| || |||||| ||||| ||| |
|
|
| T |
30235551 |
taacctgaagaggtaccaaactgataaaaatgatccaaaatattagacagatccgctgagtaaatacaaagccaattcctaacaagctgtcaaatctgat |
30235452 |
T |
|
| Q |
409 |
caaa |
412 |
Q |
| |
|
|||| |
|
|
| T |
30235451 |
caaa |
30235448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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