View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3151B-Insertion-16 (Length: 321)
Name: NF3151B-Insertion-16
Description: NF3151B
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3151B-Insertion-16 |
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Alignment Details
Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 76 - 166
Target Start/End: Complemental strand, 47109615 - 47109524
Alignment:
| Q |
76 |
gaaatcctcatcagtttggatattttcaaggtaccccttatactccatagttgttctatt-ttttatttcagatttatattttagaatattg |
166 |
Q |
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| T |
47109615 |
gaaatcttcatcagtttgaatattttcaaggtaccccttatactccatagttgttctatttttttatttcggatttatattttagaatattg |
47109524 |
T |
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Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 47109387 - 47109329
Alignment:
| Q |
263 |
gcactcaccaagtgtttgagaaaatgtcacagtaaaaagaatgttatttttgatattga |
321 |
Q |
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| T |
47109387 |
gcactcaccaagtgtttgagaaaatgtcacagtaaaaagaatgttagttttgatattga |
47109329 |
T |
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